[med-svn] r7381 - trunk/packages/mafft/trunk/debian

[Charles Plessy]

Author: plessy
Date: 2011-08-05 00:18:05 +0000 (Fri, 05 Aug 2011)
New Revision: 7381

Modified:
   trunk/packages/mafft/trunk/debian/changelog
   trunk/packages/mafft/trunk/debian/copyright
   trunk/packages/mafft/trunk/debian/rules
Log:
New upstream version and adjustemnts to changes in core/Makefile.

No new copyright holder nor license statement.


Modified: trunk/packages/mafft/trunk/debian/changelog
===================================================================
--- trunk/packages/mafft/trunk/debian/changelog	2011-08-05 00:09:21 UTC (rev 7380)
+++ trunk/packages/mafft/trunk/debian/changelog	2011-08-05 00:18:05 UTC (rev 7381)
@@ -1,5 +1,7 @@
-mafft (6.850-2) UNRELEASED; urgency=low
+mafft (6.857-1) UNRELEASED; urgency=low
 
+  * New upstream version.
+  * Enable multithread, correct FHS path (debian/rules).
   * Removed extra manpage copies instead of patching Makefile and
     installing via debhleper (debian/patches, debian/rules, debian/manpages).
   * Removed debian/dirs, not needed anymore.

Modified: trunk/packages/mafft/trunk/debian/copyright
===================================================================
--- trunk/packages/mafft/trunk/debian/copyright	2011-08-05 00:09:21 UTC (rev 7380)
+++ trunk/packages/mafft/trunk/debian/copyright	2011-08-05 00:18:05 UTC (rev 7381)
@@ -1,6 +1,6 @@
 Name    :  MAFFT
 Contact :  Kazutaka Katoh <katoh at bioreg.kyushu-u.ac.jp>
-Source  :  http://align.bmr.kyushu-u.ac.jp/mafft/software/mafft-6.717-without-extensions-src.tgz
+Source  :  http://mafft.cbrc.jp/alignment/software/mafft-6.857-without-extensions-src.tgz
 
 Comment :  Debian only distributes MAFFT without its extensions.
  The mafft-6.6xx-with-extensions-src.tgz upstream packages have an ‘extensions’

Modified: trunk/packages/mafft/trunk/debian/rules
===================================================================
--- trunk/packages/mafft/trunk/debian/rules	2011-08-05 00:09:21 UTC (rev 7380)
+++ trunk/packages/mafft/trunk/debian/rules	2011-08-05 00:18:05 UTC (rev 7381)
@@ -26,5 +26,5 @@
 	dh_clean
 
 override_dh_install:
-	$(MAKE) -C core PREFIX=$(CURDIR)/debian/mafft/usr/lib/mafft MANDIR=$(CURDIR)/debian/mafft/usr/share/man/man1 install
+	$(MAKE) -C core PREFIX=$(CURDIR)/debian/mafft/usr/lib/mafft MANDIR=$(CURDIR)/debian/mafft/usr/share/man/man1 ENABLE_MULTITHREAD=-Denablemultithread LIBDIR=$(CURDIR)/debian/mafft/usr/lib/mafft/lib/mafft install
 	rm $(CURDIR)/debian/mafft/usr/lib/mafft/lib/mafft/*.1