[med-svn] r7389 - trunk/packages/gmod/gbrowse/trunk/debian/patches

[olivier sallou]

Author: osallou-guest
Date: 2011-08-08 09:13:17 +0000 (Mon, 08 Aug 2011)
New Revision: 7389

Added:
   trunk/packages/gmod/gbrowse/trunk/debian/patches/fix_pop_url
Modified:
   trunk/packages/gmod/gbrowse/trunk/debian/patches/series
Log:
add patch in example conf files

Added: trunk/packages/gmod/gbrowse/trunk/debian/patches/fix_pop_url
===================================================================
--- trunk/packages/gmod/gbrowse/trunk/debian/patches/fix_pop_url	                        (rev 0)
+++ trunk/packages/gmod/gbrowse/trunk/debian/patches/fix_pop_url	2011-08-08 09:13:17 UTC (rev 7389)
@@ -0,0 +1,25 @@
+Author: Olivier Sallou <olivier.sallou at irisa.fr>
+Last-Update: 2011-08-08
+Description: update URL for details in example conf files to match /gb2 instead of cgi-bin/gb2
+--- a/conf/yeast_chr1+2.conf
++++ b/conf/yeast_chr1+2.conf
+@@ -158,7 +158,7 @@
+       This gene brought to you by <a href="http://www.yeastgenome.org">SGD</a>.</th>
+           <th bgcolor="cyan">Gene $name</th>
+       </tr>
+-      <tr align='left'><th><a href="/cgi-bin/gb2/gbrowse_details/yeast?name=$name" target="_new">See gene details</a></th></tr>
++      <tr align='left'><th><a href="/gb2/gbrowse_details/yeast?name=$name" target="_new">See gene details</a></th></tr>
+       <tr align='left'><th><a href="http://db.yeastgenome.org/cgi-bin/locus.pl?locus=$name" target="_new">Ask SGD about $name</a></th></tr>
+       <tr align='left'><th><a href="http://en.wikipedia.org/wiki/Special:Search?search=$name" target="_new">Ask Wikipedia about $name</a></th></tr>
+       <tr align='left'><th><a href="http://www.google.com/search?q=$name" target="_new">Ask Google about $name</a></th></tr>
+--- a/conf/yeast_renderfarm.conf
++++ b/conf/yeast_renderfarm.conf
+@@ -153,7 +153,7 @@
+       This gene brought to you by <a href="http://www.yeastgenome.org">SGD</a>.</th>
+           <th bgcolor="cyan">Gene $name</th>
+       </tr>
+-      <tr align='left'><th><a href="/cgi-bin/gb2/gbrowse_details/yeast?name=$name" target="_new">See gene details</a></th></tr>
++      <tr align='left'><th><a href="/gb2/gbrowse_details/yeast?name=$name" target="_new">See gene details</a></th></tr>
+       <tr align='left'><th><a href="http://db.yeastgenome.org/cgi-bin/locus.pl?locus=$name" target="_new">Ask SGD about $name</a></th></tr>
+       <tr align='left'><th><a href="http://en.wikipedia.org/wiki/Special:Search?search=$name" target="_new">Ask Wikipedia about $name</a></th></tr>
+       <tr align='left'><th><a href="http://www.google.com/search?q=$name" target="_new">Ask Google about $name</a></th></tr>

Modified: trunk/packages/gmod/gbrowse/trunk/debian/patches/series
===================================================================
--- trunk/packages/gmod/gbrowse/trunk/debian/patches/series	2011-08-08 08:43:51 UTC (rev 7388)
+++ trunk/packages/gmod/gbrowse/trunk/debian/patches/series	2011-08-08 09:13:17 UTC (rev 7389)
@@ -1,3 +1,4 @@
 debian-packaging-patch
 gbrowse-slave-fix_defaults_path
 manpages.patch
+fix_pop_url