[med-svn] r7559 - trunk/packages/qiime/trunk_compatible/debian

[Steffen Möller]

Author: moeller
Date: 2011-08-26 16:12:11 +0000 (Fri, 26 Aug 2011)
New Revision: 7559

Modified:
   trunk/packages/qiime/trunk_compatible/debian/changelog
   trunk/packages/qiime/trunk_compatible/debian/control
   trunk/packages/qiime/trunk_compatible/debian/rules
Log:
Uploaded to contrib (because of missing uclust)


Modified: trunk/packages/qiime/trunk_compatible/debian/changelog
===================================================================
--- trunk/packages/qiime/trunk_compatible/debian/changelog	2011-08-26 15:19:09 UTC (rev 7558)
+++ trunk/packages/qiime/trunk_compatible/debian/changelog	2011-08-26 16:12:11 UTC (rev 7559)
@@ -1,3 +1,11 @@
+qiime (1.3.0-1) unstable; urgency=low
+
+  * Bringing qiime to Debian
+  [Steffen]
+  * Some reformatting of debian/control
+
+ -- Tim Booth <tbooth at ceh.ac.uk>  Fri, 26 Aug 2011 17:48:30 +0200
+
 qiime (1.3.0-0ubuntu5) lucid; urgency=low
 
   * Very minor fix to scripts/shell/qiime_environment

Modified: trunk/packages/qiime/trunk_compatible/debian/control
===================================================================
--- trunk/packages/qiime/trunk_compatible/debian/control	2011-08-26 15:19:09 UTC (rev 7558)
+++ trunk/packages/qiime/trunk_compatible/debian/control	2011-08-26 16:12:11 UTC (rev 7559)
@@ -2,7 +2,7 @@
 Section: contrib/science
 Priority: extra
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Sri Girish Srinivasa Murthy <srigirish at evolbio.mpg.de>, Steffen Moeller <moeller at debian.org>, Tim Booth <tbooth at ceh.ac.uk>
+Uploaders: Steffen Moeller <moeller at debian.org>, Tim Booth <tbooth at ceh.ac.uk>
 Build-Depends: debhelper (>= 8), cdbs, python, python-central, python-cogent ( >= 1.5.1 ), python-numpy, python-matplotlib, ghc6
 Standards-Version: 3.9.2
 Homepage: http://qiime.sourceforge.net/
@@ -32,7 +32,8 @@
  distribution), QIIME can perform
   * library de-multiplexing and quality filtering;
   * denoising with PyroNoise;
-  * OTU and representative set picking with uclust, cdhit, mothur, BLAST, or other tools;
+  * OTU and representative set picking with uclust, cdhit, mothur, BLAST,
+    or other tools;
   * taxonomy assignment with BLAST or the RDP classifier;
   * sequence alignment with PyNAST, muscle, infernal, or other tools;
   * phylogeny reconstruction with FastTree, raxml, clearcut, or other tools;

Modified: trunk/packages/qiime/trunk_compatible/debian/rules
===================================================================
--- trunk/packages/qiime/trunk_compatible/debian/rules	2011-08-26 15:19:09 UTC (rev 7558)
+++ trunk/packages/qiime/trunk_compatible/debian/rules	2011-08-26 16:12:11 UTC (rev 7559)
@@ -40,6 +40,7 @@
 	cp -R --no-preserve=all debian/scripts/shell $(ROOTDIR)/usr/lib/qiime
 	rm -rf $(ROOTDIR)/usr/lib/qiime/shell/.svn
 	chmod -R a+rX $(ROOTDIR)/usr/lib/qiime/shell
+	chmod -R go-w $(ROOTDIR)/usr/lib/qiime/shell
 	rm -rf $(ROOTDIR)/etc/qiime/qiime_config
 	install -m 644 debian/scripts/qiime_config $(ROOTDIR)/etc/qiime/qiime_config
 	# Lintian complains about case of ChangeLog.gz