[med-svn] [SCM] cufflinks branch, patch-queue/master, created. upstream/1.1.0-34-g4d2f289

[Alexandre Mestiashvili]

The branch, patch-queue/master has been created
        at  4d2f289b014803b0ff2d8106616a7f863c90af8e (commit)

- Shortlog ------------------------------------------------------------
commit 4d2f289b014803b0ff2d8106616a7f863c90af8e
Author: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Date:   Fri Dec 2 21:21:17 2011 +0000

    fix_includes_path.patch

commit c5af02842f39b7dd69249ed2acda6da6866b240b
Author: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Date:   Fri Dec 2 21:21:17 2011 +0000

    bam2samtools

commit 4457adcdd53ae29c858b2111192343811c4f69cc
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Fri Dec 2 21:19:37 2011 +0000

    bam.h located in /usr/include/samtools and not /usr/include/bam on Debian systems

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Transcript assembly, differential expression, and differential regulation for RNA-Seq.