[med-svn] r5903 - trunk/packages/tm-align/trunk/debian

[Steffen Möller]

Author: moeller
Date: 2011-02-05 11:44:04 +0000 (Sat, 05 Feb 2011)
New Revision: 5903

Modified:
   trunk/packages/tm-align/trunk/debian/changelog
Log:
Reversal of shorting the changelog to stress the
need for best-possible communication between ourselves
and an increased importance of packages that are
not yet release to the main servers but may appear
in BioLinux or just be unredistributable - like e.g.
Rosetta and many of its friends in structural biology.


Modified: trunk/packages/tm-align/trunk/debian/changelog
===================================================================
--- trunk/packages/tm-align/trunk/debian/changelog	2011-02-05 11:21:32 UTC (rev 5902)
+++ trunk/packages/tm-align/trunk/debian/changelog	2011-02-05 11:44:04 UTC (rev 5903)
@@ -1,5 +1,58 @@
+tm-align (20110130-2) unstable; urgency=low
+
+  * New upstream version (Closes: #447505)
+    - 2011/01/30: An open source license is attached to the program
+  * Reverting changelog to keep the history.
+
+ -- Steffen Moeller <moeller at debian.org>  Sat, 05 Feb 2011 12:43:32 +0100
+
 tm-align (20110130-1) unstable; urgency=low
 
-  * Initial release (Closes: #447505)
+  * Initial release.
+  * Highly efficient debian/changelog.
 
  -- Andreas Tille <tille at debian.org>  Sun, 30 Jan 2011 22:49:21 +0100
+
+tm-align (20110124-1) unstable; urgency=low
+
+  * New upstream version
+    - 2005/06/01: A small bug of two-point superposition was fixed.
+    - 2005/10/19: the program was reformed so that the alignment results
+                  are not dependent on the specific compilers.
+    - 2006/06/20: select 'A' if there is altLoc when reading PDB file.
+    - 2007/02/27: rotation matrix from Chain-1 to Chain-2 was added.
+    - 2007/04/18: added options with TM-score normalized by average
+                  length, shorter length, or longer length of two
+                  structures.
+    - 2007/05/23: added additional output file 'TM.sup_all' for showing
+                  all atoms while 'TM.sup' is only for aligned atoms
+    - 2007/09/19: added a new feature alignment to deal with the problem
+                  of aligning fractional structures (e.g. protein
+                  interfaces).
+    - 2007/10/16: A bug for irregular bond-length models was fixed.
+    - 2009/03/14: A new initial alignment was added and previous initial
+                  alignments are further enhanced. This change increased
+                  accuracy by 4% but increases CPU cost by 40%.
+    - 2009/08/20: A bug for asymmetry alignment result was fixed.
+    - 2010/08/02: A new RMSD matrix was used to remove obsolete
+                  statements. Staled subroutines were deleted.
+    - 2011/01/03: The length of pdb file names were extended to 500
+    - 2011/01/24: Fixed a bug on output file name created on 2011/01/03 
+  * Tweaked get-orig-source in rules to spot version in upstream file
+
+  * New standards version 3.9.4
+
+ -- Tim Booth <tbooth at ceh.ac.uk>  Sun, 30 Jan 2011 13:34:53 +0000
+
+tm-align (20050601-2) UNRELEASED; urgency=low
+
+  * Updated to Standards-Version 3.7.3 (no changes needed)
+
+ -- David Paleino <d.paleino at gmail.com>  Wed, 06 Feb 2008 13:11:58 +0100
+
+tm-align (20050601-1) unstable; urgency=low
+
+  * Initial packaging.
+
+ -- Steffen Moeller <moeller at debian.org>  Sun, 21 Oct 2007 17:11:53 +0200
+