[med-svn] r5905 - in trunk/packages/beast-mcmc/trunk/debian: . source
Andreas Tille
tille at alioth.debian.org
Sat Feb 5 14:07:22 UTC 2011
Author: tille
Date: 2011-02-05 14:07:15 +0000 (Sat, 05 Feb 2011)
New Revision: 5905
Added:
trunk/packages/beast-mcmc/trunk/debian/beast-mcmc.lintian-overrides
trunk/packages/beast-mcmc/trunk/debian/beast.xpm
trunk/packages/beast-mcmc/trunk/debian/beauti.xpm
trunk/packages/beast-mcmc/trunk/debian/source/
trunk/packages/beast-mcmc/trunk/debian/source/format
Modified:
trunk/packages/beast-mcmc/trunk/debian/beast-doc.install
trunk/packages/beast-mcmc/trunk/debian/control
trunk/packages/beast-mcmc/trunk/debian/rules
Log:
Do not compress pdf files
Modified: trunk/packages/beast-mcmc/trunk/debian/beast-doc.install
===================================================================
--- trunk/packages/beast-mcmc/trunk/debian/beast-doc.install 2011-02-05 13:57:11 UTC (rev 5904)
+++ trunk/packages/beast-mcmc/trunk/debian/beast-doc.install 2011-02-05 14:07:15 UTC (rev 5905)
@@ -1,6 +1,3 @@
-doc/*.pdf usr/share/doc/beast-mcmc
-doc/StarBEAST/*.pdf usr/share/doc/beast-mcmc
-doc/PackageStructure/*.pdf usr/share/doc/beast-mcmc
-doc/EBSP/*.pdf usr/share/doc/beast-mcmc
-#doc/Virus\ Practical\ Tex/*.pdf usr/share/doc/beast-mcmc
-examples/release/*.xml usr/share/doc/beast-mcmc/examples
+doc/*.pdf usr/share/doc/beast-mcmc
+doc/*/*.pdf usr/share/doc/beast-mcmc
+examples/release/*.xml usr/share/doc/beast-mcmc/examples
Added: trunk/packages/beast-mcmc/trunk/debian/beast-mcmc.lintian-overrides
===================================================================
--- trunk/packages/beast-mcmc/trunk/debian/beast-mcmc.lintian-overrides (rev 0)
+++ trunk/packages/beast-mcmc/trunk/debian/beast-mcmc.lintian-overrides 2011-02-05 14:07:15 UTC (rev 5905)
@@ -0,0 +1,2 @@
+# The menu is calling x-terminal-emulator which is provided via dependencies
+beast-mcmc: menu-command-not-in-package /usr/share/menu/beast-mcmc:7 x-terminal-emulator
Added: trunk/packages/beast-mcmc/trunk/debian/beast.xpm
===================================================================
--- trunk/packages/beast-mcmc/trunk/debian/beast.xpm (rev 0)
+++ trunk/packages/beast-mcmc/trunk/debian/beast.xpm 2011-02-05 14:07:15 UTC (rev 5905)
@@ -0,0 +1,163 @@
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Added: trunk/packages/beast-mcmc/trunk/debian/beauti.xpm
===================================================================
--- trunk/packages/beast-mcmc/trunk/debian/beauti.xpm (rev 0)
+++ trunk/packages/beast-mcmc/trunk/debian/beauti.xpm 2011-02-05 14:07:15 UTC (rev 5905)
@@ -0,0 +1,193 @@
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+"D.h.M.M.n.v S e.c r.z.h.y.] -. .` q O.0 4 4 e >.f D B A S r.s.D.",
+"D.h.l.l.l.n y.l.v r.l.h.r.' h / Y e w 4 < O.;.k s d : ( y.g.g.D.",
+"D.l.h.h.h.n y.l.v S l.j.r.U o.( J w 9 , < 9.<.j @.I ! i.g.g.h.D.",
+"D.l.l.l.h.m g.z.n S l.h.r.U W e.P w 9 # 9 C. at .G I h _ g.h.l.l.D.",
+"D.l.z.l.z.t.m m n e.l.l.t.P ; T H e 9 > 4 q.q K e.t.g.g.l.l.l.D.",
+"D.z.z.z.z.h.Z n m r.z.l.y.^ 4 - = 2 9 , $ w ;.P u.h.h.l.M.z.z.D.",
+"D.M.l.r.e.l.l.u.y.g.z.z.g.p.U 6 5 % $ # + 2 4 - | j.z.y.t.h.M.D.",
+"D.M.S o M y.z.M.M.M.M.z.h.g.y.) ] D O @ 5 6 & 1 @ 8 i.x n Z u.D.",
+"D.M.n o z v l.M.M.M.M.M.l.l.h.u.y.e.* 3 t a p y r f T l l l r.D.",
+"D.B.R z z V M.M.M.M.B.M.l.M.M.M.l.g.t._ ( ( ( _ t.s.g.c l c g.D.",
+"D.g.r.V M e.e.r.r.r.e.e.e.r.r.r.e.( S S C C C C C S S S m C y.D.",
+"D.D.D.X X X X X X X X X . X X X X X X . . . X X X X X X X X D.D.",
+"D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.",
+"D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.",
+"D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.",
+"D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.",
+"D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D.D."
+};
Modified: trunk/packages/beast-mcmc/trunk/debian/control
===================================================================
--- trunk/packages/beast-mcmc/trunk/debian/control 2011-02-05 13:57:11 UTC (rev 5904)
+++ trunk/packages/beast-mcmc/trunk/debian/control 2011-02-05 14:07:15 UTC (rev 5905)
@@ -14,7 +14,7 @@
Package: beast-mcmc
Architecture: all
-Depends: ${shlibs:Depends}, ${misc:Depends}, beast-mcmc-lib, xterm | x-terminal-emulator
+Depends: ${shlibs:Depends}, ${misc:Depends}, openjdk-6-jre | java-jre, beast-mcmc-lib, xterm | x-terminal-emulator
Suggests: beast-doc
Description: Bayesian MCMC phylogenetic inference
BEAST is a cross-platform program for Bayesian MCMC analysis of molecular
Modified: trunk/packages/beast-mcmc/trunk/debian/rules
===================================================================
--- trunk/packages/beast-mcmc/trunk/debian/rules 2011-02-05 13:57:11 UTC (rev 5904)
+++ trunk/packages/beast-mcmc/trunk/debian/rules 2011-02-05 14:07:15 UTC (rev 5905)
@@ -26,12 +26,14 @@
override_dh_auto_build:
$(JAVA) -classpath $(CLASS_PATH) -Dant.home=$(ANT_HOME) org.apache.tools.ant.Main $(ANT_ARGS) -buildfile build.xml build
cd native && /bin/sh compileNativeLinux.sh
- ##
- ## Run test suite
- ## --------------
- ## While this test suite runs quite a bit of time (about 30min) it is recommended to be run at least once per
- ## new version upload
- ##
+ #
+ #####################################################################
+ ## Run test suite ##
+ ## -------------- ##
+ ## While this test suite runs quite a bit of time (about 30min) it ##
+ ## is recommended to be run at least once per new version upload ##
+ #####################################################################
+ #
# $(JAVA) -classpath $(CLASS_PATH) -Dant.home=$(ANT_HOME) org.apache.tools.ant.Main $(ANT_ARGS) -buildfile build.xml junit
override_dh_install:
@@ -41,6 +43,9 @@
# rename beast to beast-mcmc
mv $(CURDIR)/debian/$(PACKAGE)/usr/bin/beast $(CURDIR)/debian/$(PACKAGE)/usr/bin/beast-mcmc
+override_dh_compress:
+ dh_compress --exclude=.pdf
+
get-orig-source:
rm -rf get-orig-source $(TARBALL)
mkdir get-orig-source
Added: trunk/packages/beast-mcmc/trunk/debian/source/format
===================================================================
--- trunk/packages/beast-mcmc/trunk/debian/source/format (rev 0)
+++ trunk/packages/beast-mcmc/trunk/debian/source/format 2011-02-05 14:07:15 UTC (rev 5905)
@@ -0,0 +1 @@
+3.0 (quilt)
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