[med-svn] r5738 - in trunk/packages/vienna-rna/trunk/debian: . patches

[Alexandre Mestiashvili]

Author: malex-guest
Date: 2011-01-29 11:28:57 +0000 (Sat, 29 Jan 2011)
New Revision: 5738

Added:
   trunk/packages/vienna-rna/trunk/debian/patches/readseq-exclude.patch
Modified:
   trunk/packages/vienna-rna/trunk/debian/patches/series
   trunk/packages/vienna-rna/trunk/debian/vienna-rna.install
Log:
some fixes ( removed readseq , excluded ling2 , both tools are packaged as standalone packages)


Added: trunk/packages/vienna-rna/trunk/debian/patches/readseq-exclude.patch
===================================================================
--- trunk/packages/vienna-rna/trunk/debian/patches/readseq-exclude.patch	                        (rev 0)
+++ trunk/packages/vienna-rna/trunk/debian/patches/readseq-exclude.patch	2011-01-29 11:28:57 UTC (rev 5738)
@@ -0,0 +1,14 @@
+Readseq is a different packages which a standalone package. So we don't need to build it as a part of vienna-rna.
+Index: vienna-rna-1.8.4/Makefile.in
+===================================================================
+--- vienna-rna-1.8.4.orig/Makefile.in	2011-01-29 12:17:01.000000000 +0100
++++ vienna-rna-1.8.4/Makefile.in	2011-01-29 12:17:11.000000000 +0100
+@@ -234,7 +234,7 @@
+ 
+ #DIST_SUBDIRS = lib Progs man Utils AliFold H Perl Cluster
+ pkgdata_DATA = vienna13.par default.par
+-EXTRA_DIST = $(pkgdata_DATA) INSTALL.configure Readseq
++EXTRA_DIST = $(pkgdata_DATA) INSTALL.configure 
+ all: config.h
+ 	$(MAKE) $(AM_MAKEFLAGS) all-recursive
+ 

Modified: trunk/packages/vienna-rna/trunk/debian/patches/series
===================================================================
--- trunk/packages/vienna-rna/trunk/debian/patches/series	2011-01-29 11:24:31 UTC (rev 5737)
+++ trunk/packages/vienna-rna/trunk/debian/patches/series	2011-01-29 11:28:57 UTC (rev 5738)
@@ -1 +1,2 @@
 fix_install_relative_path.patch
+readseq-exclude.patch

Modified: trunk/packages/vienna-rna/trunk/debian/vienna-rna.install
===================================================================
--- trunk/packages/vienna-rna/trunk/debian/vienna-rna.install	2011-01-29 11:24:31 UTC (rev 5737)
+++ trunk/packages/vienna-rna/trunk/debian/vienna-rna.install	2011-01-29 11:28:57 UTC (rev 5738)
@@ -30,5 +30,4 @@
 Utils/refold.pl /usr/bin
 Utils/relplot.pl /usr/bin
 RNAforester/src/RNAforester /usr/bin
-./Readseq/readseq /usr/bin
 ./Kinfold/Kinfold /usr/bin