[med-svn] r7328 - trunk/packages/seaview/trunk/debian

[Charles Plessy]

Author: plessy
Date: 2011-07-25 10:21:00 +0000 (Mon, 25 Jul 2011)
New Revision: 7328

Modified:
   trunk/packages/seaview/trunk/debian/changelog
   trunk/packages/seaview/trunk/debian/control
   trunk/packages/seaview/trunk/debian/copyright
   trunk/packages/seaview/trunk/debian/rules
Log:
New usptream release, with no new copyright notice or license statement.

 * Built on FLTK 1.3 (enables SVG output).
 * Corrected location of the help file.
 * Build-depend on Xinerama.


Modified: trunk/packages/seaview/trunk/debian/changelog
===================================================================
--- trunk/packages/seaview/trunk/debian/changelog	2011-07-25 09:34:34 UTC (rev 7327)
+++ trunk/packages/seaview/trunk/debian/changelog	2011-07-25 10:21:00 UTC (rev 7328)
@@ -1,3 +1,11 @@
+seaview (1:4.3.0-1) unstable; urgency=low
+
+  * New upstream version with SVG output.
+  * Built on FLTK 1.3 (debian/control).
+  * Corrected location of the help file (debian/rules).
+
+ -- Charles Plessy <plessy at debian.org>  Mon, 25 Jul 2011 18:57:42 +0900
+
 seaview (1:4.2.12-1) unstable; urgency=low
 
   * New upstream versions.

Modified: trunk/packages/seaview/trunk/debian/control
===================================================================
--- trunk/packages/seaview/trunk/debian/control	2011-07-25 09:34:34 UTC (rev 7327)
+++ trunk/packages/seaview/trunk/debian/control	2011-07-25 10:21:00 UTC (rev 7328)
@@ -5,8 +5,8 @@
 DM-Upload-Allowed: yes
 Uploaders: Charles Plessy <plessy at debian.org>,
  Andreas Tille <tille at debian.org>
-Build-Depends: cdbs, debhelper ( >= 8  ), libfltk1.1-dev, libjpeg-dev, libpng12-dev,
- libxft-dev, libxext-dev,  zlib1g-dev
+Build-Depends: cdbs, debhelper ( >= 8  ), libfltk1.3-dev, libjpeg-dev, libpng12-dev,
+ libxft-dev, libxext-dev, libxinerama-dev, zlib1g-dev
 Standards-Version: 3.9.2
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/seaview/trunk/?rev=0&sc=0
 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/seaview/trunk/
@@ -21,10 +21,10 @@
  SeaView reads and writes various file formats (NEXUS, MSF, CLUSTAL, FASTA,
  PHYLIP, MASE, Newick) of DNA and protein sequences and of phylogenetic trees.
  Alignments can be manually edited. It drives the programs Muscle or Clustal W
- for multiple sequence alignment, and also allows to use any external alignment
- algorithm able to read and write FASTA-formatted files. It computes
+ for multiple sequence alignment, and also allows one to use any external
+ alignment algorithm able to read and write FASTA-formatted files. It computes
  phylogenetic trees by parsimony using PHYLIP's dnapars/protpars algorithm, by
  distance with NJ or BioNJ algorithms on a variety of evolutionary distances, or
  by maximum likelihood using the program PhyML 3.0. SeaView draws phylogenetic
- trees on screen or PostScript files, and allows to download sequences from
+ trees on screen or PostScript files, and allows one to download sequences from
  EMBL/GenBank/UniProt using the Internet. 

Modified: trunk/packages/seaview/trunk/debian/copyright
===================================================================
--- trunk/packages/seaview/trunk/debian/copyright	2011-07-25 09:34:34 UTC (rev 7327)
+++ trunk/packages/seaview/trunk/debian/copyright	2011-07-25 10:21:00 UTC (rev 7328)
@@ -1,5 +1,5 @@
 Format: http://dep.debian.net/deps/dep5/
-Source: ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.2.12.tar.gz
+Source: ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/seaview_4.3.0.tar.gz
 Disclamer: This package is not part of the Debian operating system.
  The seaview source and binary Debian packages are part of the “non-free” area
  in our archive. The packages in this area are not part of the Debian system,

Modified: trunk/packages/seaview/trunk/debian/rules
===================================================================
--- trunk/packages/seaview/trunk/debian/rules	2011-07-25 09:34:34 UTC (rev 7327)
+++ trunk/packages/seaview/trunk/debian/rules	2011-07-25 10:21:00 UTC (rev 7328)
@@ -10,4 +10,4 @@
 CFLAGS  += -Wl,--as-needed
 
 # Debian-specific names and paths
-CFLAGS  += -DDEFAULT_HELPFILE=\\\"/usr/share/seaview/seaview.html\\\" -DPHYMLNAME=\\\"phyml\\\"
+CFLAGS  += -DDEFAULT_HELPFILE=\\\"/usr/share/doc/seaview/seaview.html\\\" -DPHYMLNAME=\\\"phyml\\\"