[med-svn] r6954 - trunk/packages/ncbi-blast+/trunk/debian

[Aaron M. Ucko]

Author: ucko
Date: 2011-06-09 01:08:51 +0000 (Thu, 09 Jun 2011)
New Revision: 6954

Modified:
   trunk/packages/ncbi-blast+/trunk/debian/changelog
   trunk/packages/ncbi-blast+/trunk/debian/rules
Log:
debian/rules (DEB_CONFIGURE_EXTRA_FLAGS): add --without-caution to override
the upstream build system's reluctance to build shared libraries on the Hurd
or kFreeBSD, which it doesn't specifically recognize.  [Also for #629656.]


Modified: trunk/packages/ncbi-blast+/trunk/debian/changelog
===================================================================
--- trunk/packages/ncbi-blast+/trunk/debian/changelog	2011-06-09 00:35:24 UTC (rev 6953)
+++ trunk/packages/ncbi-blast+/trunk/debian/changelog	2011-06-09 01:08:51 UTC (rev 6954)
@@ -5,12 +5,15 @@
   * Fix several sources of build failures (per #629656):
     - debian/rules (override_dh_install): Correctly support building only
       architecture-dependent packages.
+      (DEB_CONFIGURE_EXTRA_FLAGS): add --without-caution to override the
+      upstream build system's reluctance to build shared libraries on the
+      Hurd or kFreeBSD, which it doesn't specifically recognize.
     - debian/patches/support_other_cpus (new; committed upstream too):
       build correctly on architectures that wound up defining
       NCBI_SLOW_ATOMIC_SWAP (spuriously in the case of powerpc,
       whose detection the patch fixes as well).
 
- -- Aaron M. Ucko <ucko at debian.org>  Wed, 08 Jun 2011 20:35:16 -0400
+ -- Aaron M. Ucko <ucko at debian.org>  Wed, 08 Jun 2011 21:08:44 -0400
 
 ncbi-blast+ (2.2.25-1) unstable; urgency=low
 

Modified: trunk/packages/ncbi-blast+/trunk/debian/rules
===================================================================
--- trunk/packages/ncbi-blast+/trunk/debian/rules	2011-06-09 00:35:24 UTC (rev 6953)
+++ trunk/packages/ncbi-blast+/trunk/debian/rules	2011-06-09 01:08:51 UTC (rev 6954)
@@ -5,8 +5,9 @@
 #export DH_VERBOSE=1
 
 DEB_CONFIGURE_EXTRA_FLAGS=--with-dll --with-mt --without-autodep \
-    --without-makefile-auto-update --with-flat-makefile --without-dbapi \
-    --without-lzo --with-runpath=/usr/lib/ncbi-blast+ --with-build-root=BUILD
+    --without-makefile-auto-update --with-flat-makefile --without-caution \
+    --without-dbapi --without-lzo --with-runpath=/usr/lib/ncbi-blast+ \
+    --with-build-root=BUILD
 proj=algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/
 
 # XXX - not quite right, as we get -DNDEBUG vs. -D_DEBUG