[med-svn] r7036 - trunk/packages/rostlab/profnet/trunk/debian

Thu Jun 16 11:34:55 UTC 2011

Author: lkajan-guest
Date: 2011-06-16 11:34:54 +0000 (Thu, 16 Jun 2011)
New Revision: 7036

Added:
   trunk/packages/rostlab/profnet/trunk/debian/substvars
Modified:
   trunk/packages/rostlab/profnet/trunk/debian/control
   trunk/packages/rostlab/profnet/trunk/debian/copyright
   trunk/packages/rostlab/profnet/trunk/debian/rules
Log:
added Burkhards email address, added other authors, added EMBL/LION/Columbia

Modified: trunk/packages/rostlab/profnet/trunk/debian/control
===================================================================

--- trunk/packages/rostlab/profnet/trunk/debian/control	2011-06-16 09:27:12 UTC (rev 7035)
+++ trunk/packages/rostlab/profnet/trunk/debian/control	2011-06-16 11:34:54 UTC (rev 7036)
@@ -10,80 +10,86 @@
 DM-Upload-Allowed: yes
 Homepage: http://www.predictprotein.org/
 
-Package: profnet
-Architecture: all
-Depends: ${misc:Depends}, profnet-bval, profnet-chop, profnet-con, profnet-isis, profnet-md, profnet-norsnet, profnet-prof, profnet-snapfun, profphd-net
-Description: neural network implementation
- Profnet is a component of the Predict Protein service by the lab
- of Burkhard Rost. It provides a variety of hypotheses and
- insights, gained directly from protein sequences.
- .
- This package depends on all varieties of profnet. This suits
- developers of new techniques. A particular workflow will only
- comprise one of the profnet variants.
-
 Package: profnet-bval
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Recommends: profbval
 Description: neural network implementation
- This package contains the binary specific to profbval.
+ ${Description}
+ .
+ This package contains the neural network architecture for profbval.
 
 Package: profnet-chop
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Recommends: profchop
 Description: neural network implementation
- This package contains the binary specific to profchop.
+ ${Description}
+ .
+ This package contains the neural network architecture for profchop.
 
 Package: profnet-con
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Recommends: profcon
 Description: neural network implementation
- This package contains the binary specific to profcon.
+ ${Description}
+ .
+ This package contains the neural network architecture for profcon.
 
 Package: profnet-isis
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Recommends: profisis
 Description: neural network implementation
- This package contains the binary specific to profisis.
+ ${Description}
+ .
+ This package contains the neural network architecture for profisis.
 
 Package: profnet-md
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Recommends: metadisorder
 Description: neural network implementation
- This package contains the binary specific to metadisorder (MD).
+ ${Description}
+ .
+ This package contains the neural network architecture for metadisorder.
 
 Package: profnet-norsnet
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Recommends: norsnet
 Description: neural network implementation
- This package contains the binary specific to norsnet.
+ ${Description}
+ .
+ This package contains the neural network architecture for norsnet.
 
 Package: profnet-prof
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Recommends: profphd
 Description: neural network implementation
- This package contains the binary specific to profsec and profacc.
+ ${Description}
+ .
+ This package contains the neural network architecture for profsec and profacc.
 
 Package: profnet-snapfun
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Recommends: snapfun
 Description: neural network implementation
- This package contains the binary specific to snapfun.
+ ${Description}
+ .
+ This package contains the neural network architecture for snapfun.
 
 Package: profphd-net
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Recommends: profphd
 Description: neural network implementation
- This package contains the binary specific to profphd.
+ ${Description}
+ .
+ This package contains the neural network architecture for profphd.
 
 Package: profnet-dbg
 Section: debug
@@ -91,5 +97,6 @@
 Priority: extra
 Depends: ${misc:Depends}, profnet-bval (= ${binary:Version}), profnet-chop (= ${binary:Version}), profnet-con (= ${binary:Version}), profnet-isis (= ${binary:Version}), profnet-md (= ${binary:Version}), profnet-norsnet (= ${binary:Version}), profnet-prof (= ${binary:Version}), profnet-snapfun (= ${binary:Version}), profphd-net (= ${binary:Version})
 Description: debug files for profnet packages
+ ${Description}
+ .
  This package contains the stripped debugging symbols for profnet binaries.
-

Modified: trunk/packages/rostlab/profnet/trunk/debian/copyright
===================================================================
--- trunk/packages/rostlab/profnet/trunk/debian/copyright	2011-06-16 09:27:12 UTC (rev 7035)
+++ trunk/packages/rostlab/profnet/trunk/debian/copyright	2011-06-16 11:34:54 UTC (rev 7036)
@@ -1,13 +1,17 @@
 This package was debianized by Guy Yachdav <gyachdav at rostlab.org> on
-Mon, 30 Nov 2009 14:53:52 +0100
+Mon, 30 Nov 2009 14:53:52 +0100 
 
-Upstream Author:
+Updates to the debianization by Laszlo Kajan <lkajan at rostlab.org>
 
-   B. Rost
+Upstream Authors:
 
+    Burkhard Rost <rost at rostlab.org>
+    Laszlo Kajan <lkajan at rostlab.org>
+    Guy Yachdav <gyachdav at rostlab.org>
+
 Copyright:
 
-    Copyright (C) 2009 Rostlab
+    Copyright (C) 1998 by Burkhard Rost <rost at rostlab.org> EMBL/CUBIC (Columbia University)/LION
 
 License:
 

Modified: trunk/packages/rostlab/profnet/trunk/debian/rules
===================================================================
--- trunk/packages/rostlab/profnet/trunk/debian/rules	2011-06-16 09:27:12 UTC (rev 7035)
+++ trunk/packages/rostlab/profnet/trunk/debian/rules	2011-06-16 11:34:54 UTC (rev 7036)
@@ -89,6 +89,9 @@
 #	dh_makeshlibs
 	dh_installdeb
 	dh_shlibdeps
+	for i in $$(sed -n '/^Package:/s/^.* //p' debian/control); do \
+		cat debian/substvars >> debian/$$i.substvars; \
+	done;
 	dh_gencontrol
 	dh_md5sums
 	dh_builddeb

Added: trunk/packages/rostlab/profnet/trunk/debian/substvars
===================================================================
--- trunk/packages/rostlab/profnet/trunk/debian/substvars	                        (rev 0)
+++ trunk/packages/rostlab/profnet/trunk/debian/substvars	2011-06-16 11:34:54 UTC (rev 7036)
@@ -0,0 +1 @@
+Description=Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence.  This neural network implementation has to be compiled for every different network architecture.


