[med-svn] r7082 - trunk/packages/bioperl-run/trunk/debian

[Charles Plessy]

Author: plessy
Date: 2011-06-18 03:03:03 +0000 (Sat, 18 Jun 2011)
New Revision: 7082

Modified:
   trunk/packages/bioperl-run/trunk/debian/control
Log:
Oops, gmap was non-free.


Modified: trunk/packages/bioperl-run/trunk/debian/control
===================================================================
--- trunk/packages/bioperl-run/trunk/debian/control	2011-06-18 02:53:48 UTC (rev 7081)
+++ trunk/packages/bioperl-run/trunk/debian/control	2011-06-18 03:03:03 UTC (rev 7082)
@@ -13,7 +13,7 @@
  libarray-compare-perl, libtree-dagnode-perl,
 # Needed for the regression tests: all Recommends of bioperl-run except embassy, that needs interactive setup.
  amap-align, bedtools, blast2, bowtie, bwa, clustalw, emboss, exonerate,
- gmap, hmmer, infernal, kalign, maq, mafft, muscle, phyml, primer3, probcons,
+ hmmer, infernal, kalign, maq, mafft, muscle, phyml, primer3, probcons,
  samtools, sim4, t-coffee, tigr-glimmer, wise,
 # Needed for the network tests:
  libwww-perl
@@ -29,11 +29,11 @@
 Architecture: all
 Depends: ${misc:Depends}, ${perl:Depends}, bioperl (>= 1.6.0), libbio-perl-run-perl (= ${source:Version})
 Recommends: amap-align, bedtools, blast2, bowtie, bwa, clustalw, emboss, exonerate,
- gmap, hmmer, infernal, kalign, maq, mafft, muscle, phyml, primer3, probcons,
+ hmmer, infernal, kalign, maq, mafft, muscle, phyml, primer3, probcons,
  samtools, sim4, t-coffee, tigr-glimmer, wise
 Suggests: 
 # Non-Free.
- paml, molphy, phylip,
+ gmap, paml, molphy, phylip,
 # Not available. 
 # blat, cap3, coils, condense, drawgram, drawtree, eponine, fasta, footprinter, genemark-hmm,
 # genewise, genscan, gerp, glimmer2, hyphy, lagan, lvb, match, mcs, mdust, meme, minimo,