[med-svn] r6732 - trunk/packages/ncbi-blast-plus/trunk/debian

[olivier sallou]

Author: osallou-guest
Date: 2011-05-02 07:07:37 +0000 (Mon, 02 May 2011)
New Revision: 6732

Modified:
   trunk/packages/ncbi-blast-plus/trunk/debian/control
   trunk/packages/ncbi-blast-plus/trunk/debian/rules
Log:
remote some rpath references, change compil options

Modified: trunk/packages/ncbi-blast-plus/trunk/debian/control
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/control	2011-05-02 07:00:44 UTC (rev 6731)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/control	2011-05-02 07:07:37 UTC (rev 6732)
@@ -1,7 +1,7 @@
 Source: ncbi-blast-plus
 Section: science
 Priority: optional
-Build-Depends: debhelper (>= 7.0.50~),autotools-dev,libboost-all-dev,zlib1g-dev,bzip2,python,libpcre++-dev,zlib1g-dev,chrpath
+Build-Depends: debhelper (>= 7.0.50~),autotools-dev,zlib1g,bzip2,python,libpcre++-dev,pcre3,zlib1g-dev,chrpath
 Standards-Version: 3.9.1
 Uploaders: Olivier Sallou <olivier.sallou at irisa.fr>
 DM-Upload-Allowed: yes
@@ -13,7 +13,7 @@
 
 Package: ncbi-blast-plus
 Architecture: any
-Depends: ${shlibs:Depends}, ${misc:Depends},libboost-all-dev,ncbi-data,python,bzip2,libpcre++0, zlib1g
+Depends: ${shlibs:Depends}, ${misc:Depends},ncbi-data,python,bzip2,pcre3,libpcre++0, zlib1g
 Conflicts: blast2
 Description: NCBI Blast+ is new blast evolution
  The Basic Local Alignment Search Tool (BLAST) is the most widely

Modified: trunk/packages/ncbi-blast-plus/trunk/debian/rules
===================================================================
--- trunk/packages/ncbi-blast-plus/trunk/debian/rules	2011-05-02 07:00:44 UTC (rev 6731)
+++ trunk/packages/ncbi-blast-plus/trunk/debian/rules	2011-05-02 07:07:37 UTC (rev 6732)
@@ -9,7 +9,7 @@
 # Uncomment this to turn on verbose mode.
 #export DH_VERBOSE=1
 
-export DEB_CONFIGURE_EXTRA_FLAGS= --with-dll --without-debug --with-mt  --without-gbench --without-internal  --libdir=${CURDIR}/debian/ncbi-blast-plus/usr/lib/ncbi-blast-plus  --bindir=${CURDIR}/debian/ncbi-blast-plus/usr/bin --includedir=${CURDIR}/debian/ncbi-blast-plus/usr/include  --without-3psw  --without-dbapi
+export DEB_CONFIGURE_EXTRA_FLAGS= --with-dll --without-debug --with-mt  --without-gbench --without-internal  --libdir=${CURDIR}/debian/ncbi-blast-plus/usr/lib/ncbi-blast-plus  --bindir=${CURDIR}/debian/ncbi-blast-plus/usr/bin --includedir=${CURDIR}/debian/ncbi-blast-plus/usr/include  --with-3psw=std:netopt  --without-dbapi
 
 override_dh_auto_configure:
 	${CURDIR}/configure ${DEB_CONFIGURE_EXTRA_FLAGS} --prefix=${CURDIR}/debian/ncbi-blast-plus
@@ -24,6 +24,7 @@
 	#mv ${CURDIR}/debian/ncbi-blast-plus/usr/include ${CURDIR}/debian/ncbi-blast-plus-dev/usr/
 	rm -rf ${CURDIR}/debian/ncbi-blast-plus/usr/include
 	find ${CURDIR}/debian/ncbi-blast-plus/usr/bin/ -type f -not -name "*.p*" | xargs chrpath -d
+	find ${CURDIR}/debian/ncbi-blast-plus/usr/lib/ncbi-blast-plus/*.so | xargs chrpath -d
 
 override_dh_clean:
 	dh_clean