[med-svn] r8046 - trunk/packages/ncbi-blast+/trunk/debian

[olivier sallou]

Author: osallou-guest
Date: 2011-10-03 08:04:09 +0000 (Mon, 03 Oct 2011)
New Revision: 8046

Modified:
   trunk/packages/ncbi-blast+/trunk/debian/README.Debian
   trunk/packages/ncbi-blast+/trunk/debian/changelog
   trunk/packages/ncbi-blast+/trunk/debian/control
   trunk/packages/ncbi-blast+/trunk/debian/rules
Log:
add comments regarding bug 642991 and add gene_info_reader to package

Modified: trunk/packages/ncbi-blast+/trunk/debian/README.Debian
===================================================================
--- trunk/packages/ncbi-blast+/trunk/debian/README.Debian	2011-10-03 04:27:29 UTC (rev 8045)
+++ trunk/packages/ncbi-blast+/trunk/debian/README.Debian	2011-10-03 08:04:09 UTC (rev 8046)
@@ -3,5 +3,8 @@
 
  This package does not include the documentation of the software. Documentation is available online.
  Detail is available:  man ncbi-blast+
+ Package does  not include test binaries nor datatool and projet_tree_builder from upstream.
+ Those binaries are indeed for internal upstream use, and are of no use nor related to blast+ tool itself
+ (see Bug #642991 discussion with upstream answers)
 
  -- Olivier Sallou <osallou at irisa.fr>  Wed, 27 Apr 2011 15:19:59 +0200

Modified: trunk/packages/ncbi-blast+/trunk/debian/changelog
===================================================================
--- trunk/packages/ncbi-blast+/trunk/debian/changelog	2011-10-03 04:27:29 UTC (rev 8045)
+++ trunk/packages/ncbi-blast+/trunk/debian/changelog	2011-10-03 08:04:09 UTC (rev 8046)
@@ -1,3 +1,13 @@
+ncbi-blast+ (2.2.25-6) unstable; urgency=low
+
+   * debian/control:
+     - Luca Capello <luca at pca.it>, fix reference to the legacy_blast script (Closes: #642986).
+     + add a new line to separate the actual description from usage
+      instruction in the long Description:.
+   * debian/rules: add gene_info_reader binary in package
+
+ -- Olivier Sallou <olivier.sallou at irisa.fr>  Fri, 30 Sep 2011 12:31:05 -0400
+
 ncbi-blast+ (2.2.25-5) unstable; urgency=low
 
   * Team upload.

Modified: trunk/packages/ncbi-blast+/trunk/debian/control
===================================================================
--- trunk/packages/ncbi-blast+/trunk/debian/control	2011-10-03 04:27:29 UTC (rev 8045)
+++ trunk/packages/ncbi-blast+/trunk/debian/control	2011-10-03 08:04:09 UTC (rev 8046)
@@ -37,6 +37,7 @@
 Description: NCBI Blast legacy call script
  This package adds some fake scripts to call NCBI+ programs
  with the NCBI blast command line. It makes use of the
- legacy_blast.pl script in ncbi-blast+ package.
+ legacy_blast script in ncbi-blast+ package.
+ .
  To use those scripts, /usr/share/ncbi-blast+/bin must be added
  to the PATH.

Modified: trunk/packages/ncbi-blast+/trunk/debian/rules
===================================================================
--- trunk/packages/ncbi-blast+/trunk/debian/rules	2011-10-03 04:27:29 UTC (rev 8045)
+++ trunk/packages/ncbi-blast+/trunk/debian/rules	2011-10-03 08:04:09 UTC (rev 8046)
@@ -52,7 +52,7 @@
 	   $(instroot)/bin/windowmasker_2.2.22_adapter
 # Clean up tests, demos, and internal build tools
 	rm -f $(instroot)/bin/*test* $(instroot)/bin/seqdb_demo \
-	    $(instroot)/bin/gene_info_reader $(instroot)/bin/datatool \
+	    $(instroot)/bin/datatool \
 	    $(instroot)/bin/project_tree_builder \
 	    $(instroot)/lib/ncbi-blast+/libtest_*.so