[med-svn] r7909 - in trunk/packages/biomaj-watcher/tags: . 1.2.0-2/debian 1.2.0-2/debian/patches
olivier sallou
osallou-guest at alioth.debian.org
Fri Sep 23 09:40:30 UTC 2011
Author: osallou-guest
Date: 2011-09-23 09:40:30 +0000 (Fri, 23 Sep 2011)
New Revision: 7909
Added:
trunk/packages/biomaj-watcher/tags/1.2.0-2/
trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/changelog
trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/control
trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/
trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/add_missing_lib
trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/series
trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/postinst
Removed:
trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/changelog
trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/control
trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/series
trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/postinst
Log:
[svn-buildpackage] Tagging biomaj-watcher 1.2.0-2
Deleted: trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/changelog
===================================================================
--- trunk/packages/biomaj-watcher/trunk/debian/changelog 2011-09-20 20:58:57 UTC (rev 7896)
+++ trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/changelog 2011-09-23 09:40:30 UTC (rev 7909)
@@ -1,13 +0,0 @@
-biomaj-watcher (1.2.0-1) unstable; urgency=low
-
- * New upstream release with new features (multi tenant, private banks...)
- * Spanish translation - Camaleón <noelamac at gmail.com> (Closes: #640096).
- * Swedish translation - Martin Bagge <brother at bsnet.se> (Closes: #640057).
-
- -- Olivier Sallou <olivier.sallou at irisa.fr> Fri, 12 Aug 2011 16:41:06 +0200
-
-biomaj-watcher (1.0-1) unstable; urgency=low
-
- * Initial release (Closes: #609038).
-
- -- Olivier Sallou <olivier.sallou at irisa.fr> Mon, 25 Jul 2011 01:44:27 +0200
Copied: trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/changelog (from rev 7898, trunk/packages/biomaj-watcher/trunk/debian/changelog)
===================================================================
--- trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/changelog (rev 0)
+++ trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/changelog 2011-09-23 09:40:30 UTC (rev 7909)
@@ -0,0 +1,19 @@
+biomaj-watcher (1.2.0-2) unstable; urgency=low
+
+ * Fix patch, login and jobs location not taken into account in context xml.
+
+ -- Olivier Sallou <olivier.sallou at irisa.fr> Fri, 16 Sep 2011 10:32:04 +0200
+
+biomaj-watcher (1.2.0-1) unstable; urgency=low
+
+ * New upstream release with new features (multi tenant, private banks...)
+ * Spanish translation - Camaleón <noelamac at gmail.com> (Closes: #640096).
+ * Swedish translation - Martin Bagge <brother at bsnet.se> (Closes: #640057).
+
+ -- Olivier Sallou <olivier.sallou at irisa.fr> Fri, 12 Aug 2011 16:41:06 +0200
+
+biomaj-watcher (1.0-1) unstable; urgency=low
+
+ * Initial release (Closes: #609038).
+
+ -- Olivier Sallou <olivier.sallou at irisa.fr> Mon, 25 Jul 2011 01:44:27 +0200
Deleted: trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/control
===================================================================
--- trunk/packages/biomaj-watcher/trunk/debian/control 2011-09-20 20:58:57 UTC (rev 7896)
+++ trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/control 2011-09-23 09:40:30 UTC (rev 7909)
@@ -1,30 +0,0 @@
-Source: biomaj-watcher
-Section: contrib/science
-Priority: optional
-Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Olivier Sallou <olivier.sallou at irisa.fr>
-DM-Upload-Allowed: yes
-Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/biomaj-watcher/trunk/
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/biomaj-watcher/trunk/?rev=0&sc=0
-Homepage: http://biomaj.genouest.org
-Build-Depends: debhelper (>= 8),ant(>=1.7), zip, unzip
-Build-Depends-Indep: openjdk-6-jdk|default-jdk|java6-sdk, debconf, po-debconf, liblog4j1.2-java, libcommons-lang-java,
- libcommons-logging-java, libjsch-java, libjdom1-java, libquartz-java(>=1.6),
- libxerces2-java,biomaj(>=1.1), javahelper (>=0.25), biomaj (>= 1.2)
-Standards-Version: 3.9.2
-
-Package: biomaj-watcher
-Architecture: all
-Depends: ${misc:Depends}, openjdk-6-jdk|default-jdk|java6-sdk, tomcat6 (>=6.0.32-3), biomaj (>= 1.2), debconf,
- liblog4j1.2-java, libjsch-java (>= 0.1.42),libjdom1-java (>= 1.1), libcommons-lang-java (>=2.4),
- libcommons-logging-java (>=1.1),libquartz-java(>=1.6),libxerces2-java, unzip, zip
-Description: BioMAJ web interface
- BioMAJ watcher provide a management interface for the Biomaj tool.
- It runs in a web container (tomcat) and is accessible at address:
- http://myhost:myport/BmajWatcher
- .
- The web interface calls the biomaj binary, and can run bank updates,
- removal and list. A cron manager is integrated to schedule bank update.
- At last, it integrates a bank properties editor to define or modify banks.
- The intterface administrator has special priviledges while anonymous user
- can get an overview of available data.
Copied: trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/control (from rev 7902, trunk/packages/biomaj-watcher/trunk/debian/control)
===================================================================
--- trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/control (rev 0)
+++ trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/control 2011-09-23 09:40:30 UTC (rev 7909)
@@ -0,0 +1,30 @@
+Source: biomaj-watcher
+Section: contrib/science
+Priority: optional
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Olivier Sallou <olivier.sallou at irisa.fr>
+DM-Upload-Allowed: yes
+Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/biomaj-watcher/trunk/
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/biomaj-watcher/trunk/?rev=0&sc=0
+Homepage: http://biomaj.genouest.org
+Build-Depends: debhelper (>= 8),ant(>=1.7), zip, unzip
+Build-Depends-Indep: openjdk-6-jdk|default-jdk|java6-sdk, debconf, po-debconf, liblog4j1.2-java, libcommons-lang-java,
+ libcommons-logging-java, libjsch-java, libjdom1-java, libquartz-java(>=1.6),libgnumail-java,
+ libxerces2-java, javahelper (>=0.25), biomaj (>= 1.2)
+Standards-Version: 3.9.2
+
+Package: biomaj-watcher
+Architecture: all
+Depends: ${misc:Depends}, openjdk-6-jdk|default-jdk|java6-sdk, tomcat6 (>=6.0.32-3), biomaj (>= 1.2), debconf,
+ liblog4j1.2-java, libjsch-java (>= 0.1.42),libjdom1-java (>= 1.1), libcommons-lang-java (>=2.4),
+ libcommons-logging-java (>=1.1),libquartz-java(>=1.6),libxerces2-java, unzip, zip, libgnumail-java
+Description: BioMAJ web interface
+ BioMAJ watcher provide a management interface for the Biomaj tool.
+ It runs in a web container (tomcat) and is accessible at address:
+ http://myhost:myport/BmajWatcher
+ .
+ The web interface calls the biomaj binary, and can run bank updates,
+ removal and list. A cron manager is integrated to schedule bank update.
+ At last, it integrates a bank properties editor to define or modify banks.
+ The intterface administrator has special priviledges while anonymous user
+ can get an overview of available data.
Copied: trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/add_missing_lib (from rev 7901, trunk/packages/biomaj-watcher/trunk/debian/patches/add_missing_lib)
===================================================================
--- trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/add_missing_lib (rev 0)
+++ trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/add_missing_lib 2011-09-23 09:40:30 UTC (rev 7909)
@@ -0,0 +1,10 @@
+--- a/usr/share/biomaj-watcher/src/build.xml
++++ b/usr/share/biomaj-watcher/src/build.xml
+@@ -18,6 +18,7 @@
+ <include name="jdom1.jar" />
+ <include name="log4j-1.2.jar" />
+ <include name="jsch.jar" />
++ <include name="gnumail.jar" />
+ </fileset>
+ </path>
+
Deleted: trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/series
===================================================================
--- trunk/packages/biomaj-watcher/trunk/debian/patches/series 2011-09-22 13:33:35 UTC (rev 7897)
+++ trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/series 2011-09-23 09:40:30 UTC (rev 7909)
@@ -1 +0,0 @@
-fix_config_load
Copied: trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/series (from rev 7901, trunk/packages/biomaj-watcher/trunk/debian/patches/series)
===================================================================
--- trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/series (rev 0)
+++ trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/patches/series 2011-09-23 09:40:30 UTC (rev 7909)
@@ -0,0 +1,2 @@
+fix_config_load
+add_missing_lib
Deleted: trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/postinst
===================================================================
--- trunk/packages/biomaj-watcher/trunk/debian/postinst 2011-09-20 20:58:57 UTC (rev 7896)
+++ trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/postinst 2011-09-23 09:40:30 UTC (rev 7909)
@@ -1,84 +0,0 @@
-#!/bin/sh
-
-set -e
-
-# Source debconf library.
-. /usr/share/debconf/confmodule
-
-case "$1" in
- configure)
-
- biomajwatcher_root="/usr/share/biomaj-watcher"
- bmajconf="/etc/biomaj-watcher"
- bmajroot="/usr/share/biomaj"
-
- db_get biomaj/login
- app_login="$RET"
-
- db_get biomaj/ldap
- use_ldap="$RET"
- db_get biomaj/ldap_server
- ldap_host="$RET"
- db_get biomaj/ldap_dn
- ldap_dn="$RET"
- db_get biomaj/ldap_filter
- opt_filer="$RET"
-
- java -cp $biomajwatcher_root/bin WatcherConfigurator bmajroot:=$bmajroot bmajconf:=$bmajconf use_ldap:=$use_ldap ldap_host:=$ldap_host ldap_dn:=$ldap_dn opt_filter:=$opt_filter app_login:=$app_login
-
- # Copy required libs
- rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/xercesImpl.jar
- ln -s /usr/share/java/xercesImpl.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/xercesImpl.jar
- rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/commons-lang.jar
- ln -s /usr/share/java/commons-lang.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/commons-lang.jar
- rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/commons-logging.jar
- ln -s /usr/share/java/commons-logging.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/commons-logging.jar
- rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/jdom1.jar
- ln -s /usr/share/java/jdom1.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/jdom1.jar
- rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/jsch.jar
- ln -s /usr/share/java/jsch.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/jsch.jar
- rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/log4j-1.2.jar
- ln -s /usr/share/java/log4j-1.2.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/log4j-1.2.jar
- rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/quartz.jar
- ln -s /usr/share/java/quartz.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/quartz.jar
-
- #cp /usr/share/biomaj/lib/biomaj.jar /var/lib/tomcat6/shared/
- rm -f /var/lib/tomcat6/shared/biomaj.jar
- cp /usr/share/biomaj/lib/biomaj.jar /var/lib/tomcat6/shared/biomaj.jar
-
-
- chown -R tomcat6 /etc/biomaj/db_properties
- chown -R tomcat6 /usr/share/java/webapps/biomaj-watcher
- chmod -R 775 /etc/biomaj/db_properties
- chown -R tomcat6 /var/log/biomaj
- chmod -R 775 /var/log/biomaj
- chown -R tomcat6 /var/lib/biomaj
- chmod -R 775 /var/lib/biomaj
- chown -R tomcat6 /etc/biomaj-watcher
- # Update context
- java -cp $biomajwatcher_root/bin UpdateToBiomaj1_2 /usr/share/java/webapps/biomaj-watcher admin
- chown -R tomcat6 /etc/biomaj-watcher
- #cp /etc/biomaj-watcher/BmajWatcher*.xml /var/lib/tomcat6/conf/Catalina/localhost/
- rm -f /etc/tomcat6/Catalina/localhost/BmajWatcher.xml
- rm -f /etc/tomcat6/Catalina/localhost/BmajWatcher#logs.xml
- ln -s /etc/biomaj-watcher/BmajWatcher.xml /etc/tomcat6/Catalina/localhost/BmajWatcher.xml
- ln -s /etc/biomaj-watcher/BmajWatcher#logs.xml /etc/tomcat6/Catalina/localhost/BmajWatcher#logs.xml
-
- service tomcat6 restart
-
-
- ;;
-
- abort-upgrade|abort-remove|abort-deconfigure)
- ;;
-
- *)
- echo "postinst called with unknown argument \`$1'" >&2
- exit 1
- ;;
-esac
-
-
-#DEBHELPER#
-
-
Copied: trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/postinst (from rev 7903, trunk/packages/biomaj-watcher/trunk/debian/postinst)
===================================================================
--- trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/postinst (rev 0)
+++ trunk/packages/biomaj-watcher/tags/1.2.0-2/debian/postinst 2011-09-23 09:40:30 UTC (rev 7909)
@@ -0,0 +1,85 @@
+#!/bin/sh
+
+set -e
+
+# Source debconf library.
+. /usr/share/debconf/confmodule
+
+case "$1" in
+ configure)
+
+ biomajwatcher_root="/usr/share/biomaj-watcher"
+ bmajconf="/etc/biomaj-watcher"
+ bmajroot="/usr/share/biomaj"
+
+ db_get biomaj/login
+ app_login="$RET"
+
+ db_get biomaj/ldap
+ use_ldap="$RET"
+ db_get biomaj/ldap_server
+ ldap_host="$RET"
+ db_get biomaj/ldap_dn
+ ldap_dn="$RET"
+ db_get biomaj/ldap_filter
+ opt_filer="$RET"
+
+ java -cp $biomajwatcher_root/bin WatcherConfigurator bmajroot:=$bmajroot bmajconf:=$bmajconf use_ldap:=$use_ldap ldap_host:=$ldap_host ldap_dn:=$ldap_dn opt_filter:=$opt_filter app_login:=$app_login
+
+ # Copy required libs
+ rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/xercesImpl.jar
+ ln -s /usr/share/java/xercesImpl.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/xercesImpl.jar
+ rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/commons-lang.jar
+ ln -s /usr/share/java/commons-lang.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/commons-lang.jar
+ rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/commons-logging.jar
+ ln -s /usr/share/java/commons-logging.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/commons-logging.jar
+ rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/jdom1.jar
+ ln -s /usr/share/java/jdom1.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/jdom1.jar
+ rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/jsch.jar
+ ln -s /usr/share/java/jsch.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/jsch.jar
+ rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/log4j-1.2.jar
+ ln -s /usr/share/java/log4j-1.2.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/log4j-1.2.jar
+ rm -f /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/quartz.jar
+ ln -s /usr/share/java/quartz.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/quartz.jar
+ ln -s /usr/share/java/gnumail.jar /usr/share/java/webapps/biomaj-watcher/WEB-INF/lib/gnumail.jar
+
+ #cp /usr/share/biomaj/lib/biomaj.jar /var/lib/tomcat6/shared/
+ rm -f /var/lib/tomcat6/shared/biomaj.jar
+ cp /usr/share/biomaj/lib/biomaj.jar /var/lib/tomcat6/shared/biomaj.jar
+
+
+ chown -R tomcat6 /etc/biomaj/db_properties
+ chown -R tomcat6 /usr/share/java/webapps/biomaj-watcher
+ chmod -R 775 /etc/biomaj/db_properties
+ chown -R tomcat6 /var/log/biomaj
+ chmod -R 775 /var/log/biomaj
+ chown -R tomcat6 /var/lib/biomaj
+ chmod -R 775 /var/lib/biomaj
+ chown -R tomcat6 /etc/biomaj-watcher
+ # Update context
+ java -cp $biomajwatcher_root/bin UpdateToBiomaj1_2 /usr/share/java/webapps/biomaj-watcher admin
+ chown -R tomcat6 /etc/biomaj-watcher
+ #cp /etc/biomaj-watcher/BmajWatcher*.xml /var/lib/tomcat6/conf/Catalina/localhost/
+ rm -f /etc/tomcat6/Catalina/localhost/BmajWatcher.xml
+ rm -f /etc/tomcat6/Catalina/localhost/BmajWatcher#logs.xml
+ ln -s /etc/biomaj-watcher/BmajWatcher.xml /etc/tomcat6/Catalina/localhost/BmajWatcher.xml
+ ln -s /etc/biomaj-watcher/BmajWatcher#logs.xml /etc/tomcat6/Catalina/localhost/BmajWatcher#logs.xml
+
+ service tomcat6 restart
+
+
+ ;;
+
+ abort-upgrade|abort-remove|abort-deconfigure)
+ ;;
+
+ *)
+ echo "postinst called with unknown argument \`$1'" >&2
+ exit 1
+ ;;
+esac
+
+
+#DEBHELPER#
+
+
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