[med-svn] r10272 - trunk/packages/hmmer/trunk/debian

[Andreas Tille]

Author: tille
Date: 2012-04-03 09:48:58 +0000 (Tue, 03 Apr 2012)
New Revision: 10272

Modified:
   trunk/packages/hmmer/trunk/debian/changelog
   trunk/packages/hmmer/trunk/debian/copyright
Log:
Rewritten copyright to match DEP5


Modified: trunk/packages/hmmer/trunk/debian/changelog
===================================================================
--- trunk/packages/hmmer/trunk/debian/changelog	2012-04-03 09:28:10 UTC (rev 10271)
+++ trunk/packages/hmmer/trunk/debian/changelog	2012-04-03 09:48:58 UTC (rev 10272)
@@ -10,6 +10,9 @@
      - Fixed Vcs fields
   * debhelper 8 (control + compat)
   * debian/docs: removed because empty
+  * debian/copyright:
+     - Rewritten to match DEP5 (verified using `cme fix dpkg-copyright`)
+     - Added Files: easel:* section
 
  -- Andreas Tille <tille at debian.org>  Tue, 03 Apr 2012 09:53:16 +0200
 

Modified: trunk/packages/hmmer/trunk/debian/copyright
===================================================================
--- trunk/packages/hmmer/trunk/debian/copyright	2012-04-03 09:28:10 UTC (rev 10271)
+++ trunk/packages/hmmer/trunk/debian/copyright	2012-04-03 09:48:58 UTC (rev 10272)
@@ -1,28 +1,74 @@
-This package was debianized by John Lapeyre <lapeyre at physics.arizona.edu> on
-Thu, 13 Aug 1998 21:48:53 -0700.
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: HMMER
+Upstream-Contact: Sean R. Eddy <eddy at genetics.wustl.edu>
+Source: ftp://selab.janelia.org/pub/software/hmmer3/3.0/
 
-It was downloaded from ftp://selab.janelia.org/pub/software/hmmer/
+Files: *
+Copyright: 1992-2010 Sean R. Eddy <eddy at genetics.wustl.edu>
+                     Howard Hughes Medical Institute
+           1992-2004 Washington University School of Medicine
+           1992-1994 MRC Laboratory of Molecular Biology
+License: GPL-3+
 
-HMMER - Biological sequence analysis with profile hidden Markov models
-Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
+Files: easel/*
+Copyright: 2004-2009 Sean R. Eddy <eddy at genetics.wustl.edu>
+           2006-2009 Howard Hughes Medical Institute
+License: The-Janelia-Farm-Software-License
+ Redistribution and use in source and binary forms, with or without
+ modification, are permitted provided that the following conditions are
+ met:
+ .
+ 1. Redistributions of source code must retain the above copyright
+    notice, this list of conditions and the following disclaimer.
+ .
+ 2. Redistributions in binary form must reproduce the above copyright
+    notice, this list of conditions and the following disclaimer in
+    the documentation and/or other materials provided with the
+    distribution.
+ .
+ 3. Neither the name of the Howard Hughes Medical Institute nor the
+    names of its contributors may be used to endorse or promote
+    products derived from this software without specific prior written
+    permission.
+ .
+ THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
+ "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
+ LIMITED TO, ANY IMPLIED WARRANTIES OF MERCHANTABILITY,
+ NON-INFRINGEMENT, OR FITNESS FOR A PARTICULAR PURPOSE ARE
+ DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE
+ LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR
+ CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF
+ SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
+ REASONABLE ROYALTIES; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
+ ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR
+ TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE
+ USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH
+ DAMAGE.
 
-Upstream author: Sean Eddy <eddy at genetics.wustl.edu>
+Files: debian/*
+Copyright: 1998 John Lapeyre <lapeyre at physics.arizona.edu>
+           1999-2001 Matthew Vernon <matthew at debian.org>
+           2006-2007 Nelson A. de Oliveira <naoliv at gmail.com>
+           2008-2012 Andreas Tille <tille at debian.org>
+                     Charles Plessy <plessy at debian.org>
+           2010 Eric Talevich <etal at uga.edu>,
+                Steffen Möller <moeller at debian.org>
+License: GPL-3+
 
-License:
-
+License: GPL-3+
    This package is free software; you can redistribute it and/or modify
    it under the terms of the GNU General Public License version 3 as published
    by the Free Software Foundation.
-
+ .
    This package is distributed in the hope that it will be useful,
    but WITHOUT ANY WARRANTY; without even the implied warranty of
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
    GNU General Public License for more details.
-
+ .
    You should have received a copy of the GNU General Public License
    along with this package; if not, write to the Free Software
    Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA  02110-1301 USA
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License can be found in `/usr/share/common-licenses/GPL-3'.
 
-On Debian systems, the complete text of the GNU General
-Public License can be found in `/usr/share/common-licenses/GPL-3'.
-