[med-svn] [SCM] tophat branch, master, updated. debian/1.4.1-1-13-gfc9cd68

[Alexandre Mestiashvili]

The following commit has been merged in the master branch:
commit fc9cd68bea90178a2b2e44d505f48e4b0e77a2d9
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Sat Apr 14 11:20:51 2012 +0200

    debian/control added libboost-thread-dev dependency
        Suggests: bowtie2

diff --git a/debian/control b/debian/control
index 1b625e3..3d8f4c8 100644
--- a/debian/control
+++ b/debian/control
@@ -7,7 +7,8 @@ Uploaders: Carlos Borroto <carlos.borroto at gmail.com>,
  Alexandre Mestiashvili <alex at biotec.tu-dresden.de>,
  Andreas Tille <tille at debian.org>
 Build-Depends: debhelper (>= 8), autotools-dev, libbam-dev (>=0.1.16),
- zlib1g-dev, dh-autoreconf, python (>=2.6.6-3~), seqan-dev (>= 1.3~)
+ zlib1g-dev, dh-autoreconf, python (>=2.6.6-3~), seqan-dev (>= 1.3~),
+ libboost-thread-dev
 Standards-Version: 3.9.2
 Homepage: http://tophat.cbcb.umd.edu/
 Vcs-Git: git://git.debian.org/debian-med/tophat.git
@@ -17,7 +18,7 @@ Package: tophat
 Architecture: any
 Pre-Depends: dpkg (>= 1.15.6~)
 Depends: ${shlibs:Depends}, ${misc:Depends}, python (>=2.6.6-3~), bowtie
-Suggests: cufflinks
+Suggests: cufflinks, bowtie2
 Description: fast splice junction mapper for RNA-Seq reads
  TopHat aligns RNA-Seq reads to mammalian-sized genomes using the ultra
  high-throughput short read aligner Bowtie, and then analyzes the

-- 
A spliced read mapper for RNA-Seq