[med-svn] r10581 - trunk/packages/saint/trunk/debian

[Andreas Tille]

Author: tille
Date: 2012-04-25 09:34:33 +0000 (Wed, 25 Apr 2012)
New Revision: 10581

Added:
   trunk/packages/saint/trunk/debian/copyright
Modified:
   trunk/packages/saint/trunk/debian/control
Log:
Better description; add preliminary copyright information - needs further clarification


Modified: trunk/packages/saint/trunk/debian/control
===================================================================
--- trunk/packages/saint/trunk/debian/control	2012-04-25 07:40:59 UTC (rev 10580)
+++ trunk/packages/saint/trunk/debian/control	2012-04-25 09:34:33 UTC (rev 10581)
@@ -13,9 +13,14 @@
 Architecture: any
 Depends: ${shlibs:Depends}, ${misc:Depends}
 Description: Significance Analysis of INTeractome
- SAINT is a software for assigning confidence scores to protein-protein
- interactions based on quantitative proteomics data in AP-MS experiments.
- We posted the version used for spectral count data in the yeast kinase
- interactome work not incorporating control purification, as well as a
- generalized implementation for spectral count data with and without
- control purification.
+ SAINT implements the scoring algorithm for protein-protein interaction
+ data using label free quantitative proteomics data in AP-MS experiments.
+ It was used for spectral count data in the yeast kinase interactome work
+ not incorporating control purification, as well as a generalized
+ implementation for spectral count data with and without control
+ purification.
+ .
+ Alternatively, you can also run SAINT in combination with ProHits.
+ .
+ The package was written for either doing analysis without or with
+ control IPs and

Added: trunk/packages/saint/trunk/debian/copyright
===================================================================
--- trunk/packages/saint/trunk/debian/copyright	                        (rev 0)
+++ trunk/packages/saint/trunk/debian/copyright	2012-04-25 09:34:33 UTC (rev 10581)
@@ -0,0 +1,43 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: SAINT
+Upstream-Contact: Hyung Won Choi <hyung_won_choi at nuhs.edu.sg>
+Source: https://sourceforge.net/projects/saint-apms/files/
+
+Files: *
+Copyright: © 2010-2012 Hyung Won Choi <hyung_won_choi at nuhs.edu.sg>
+License: GPL-2+
+Comment:
+ From: Hyung Won Choi <hyung_won_choi at nuhs.edu.sg>
+ To: Andreas Tille <andreas at fam-tille.de>
+ Date: Wed, 25 Apr 2012 06:36:29 +0800
+ Subject: RE: Saint for Debian
+ .
+ There should be a gnu license statement in the header files.
+ I will go check when I go to office today.
+
+Files: debian/*
+Copyright: © 2012 Andreas Tille <tille at debian.org>
+License: GPL-2+
+
+License: GPL-2+
+ This program is free software; you can redistribute it
+ and/or modify it under the terms of the GNU General Public
+ License as published by the Free Software Foundation; either
+ version 2 of the License, or (at your option) any later
+ version.
+ .
+ This program is distributed in the hope that it will be
+ useful, but WITHOUT ANY WARRANTY; without even the implied
+ warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ PURPOSE.  See the GNU General Public License for more
+ details.
+ .
+ You should have received a copy of the GNU General Public
+ License along with this package; if not, write to the Free
+ Software Foundation, Inc., 51 Franklin St, Fifth Floor,
+ Boston, MA  02110-1301 USA
+ .
+ On Debian systems, the full text of the GNU General Public
+ License version 2 can be found in the file
+ `/usr/share/common-licenses/GPL-2'.
+