[med-svn] r11962 - trunk/packages/strap-base/trunk/debian

[Christoph Gille]

Author: christophgil-guest
Date: 2012-08-01 21:14:44 +0000 (Wed, 01 Aug 2012)
New Revision: 11962

Modified:
   trunk/packages/strap-base/trunk/debian/control
   trunk/packages/strap-base/trunk/debian/rules
Log:
Minor changes in Description



Modified: trunk/packages/strap-base/trunk/debian/control
===================================================================
--- trunk/packages/strap-base/trunk/debian/control	2012-08-01 21:12:09 UTC (rev 11961)
+++ trunk/packages/strap-base/trunk/debian/control	2012-08-01 21:14:44 UTC (rev 11962)
@@ -17,15 +17,17 @@
 Enhances: 
 Description: Minimal environment for the bioinformatics tool Strap for
  viewing and editing protein sequence alignments and 3D-structure
- superpositions.  The package strap-base provides shell commands to
- generate sequence alignment files in different output formats:
- strap_to_clustal, strap_to_msf, strap_to_multiple_fasta,
- strap_to_html, strap_to_word.  The alignment export for web browser
- or word processor supports highlighting and annotation of residue
- positions, visualization of the secondary structure, protein icons
- and web references.  The command strap_base starts Strap in GUI mode
- and may be used by other programs to launch Strap as an interactive
- protein alignment viewer. However, users should install the package
- strap which also includes all required bioinformatics tools.
+ superpositions.  
+ The package strap-base provides shell commands to generate sequence
+ alignment files in different output formats: strap_to_clustal,
+ strap_to_msf, strap_to_multiple_fasta, strap_to_html, strap_to_word.
+ The alignment export for web browser or word processor supports
+ highlighting and annotation of residue positions, visualization of
+ the secondary structure, protein icons and web references.  The
+ command strap_base starts Strap in GUI mode and may be used by other
+ programs to launch Strap as an interactive protein alignment
+ viewer. Several required packages like Pymol are not installed along
+ with strap-base.  Users should therefore install the package strap
+ which also includes all required bioinformatics tools.
 
 

Modified: trunk/packages/strap-base/trunk/debian/rules
===================================================================
--- trunk/packages/strap-base/trunk/debian/rules	2012-08-01 21:12:09 UTC (rev 11961)
+++ trunk/packages/strap-base/trunk/debian/rules	2012-08-01 21:14:44 UTC (rev 11962)
@@ -22,7 +22,7 @@
 	#It provides always-on-top, iconization, to-front etc.
 	cd $(SRC_TMP)/strap/src && cc -lm -lX11 -o $(CURDIR)/nativeTools_unix2 nativeTools_unix2.c
 	cd $(SRC_TMP)/strap/src && find . -name "*.java" > ../javaFiles.txt
-	#fgrep k_v_Arry $(SRC_TMP)/strap/src/charite/christo/ChUtils.java
+
 	cd $(SRC_TMP)/strap/src && javac -O -cp @$(SRC_TMP)/strap/classpath.txt   @../javaFiles.txt
 	cd $(SRC_TMP)/strap/src && jar -cmf $(SRC_TMP)/strap/Manifest $(CURDIR)/strap-protein-alignment-$(VERSION).jar *