[med-svn] [SCM] r-bioc-limma branch, meta, updated. meta/3.10.3-1-2-g4d595d0
Charles Plessy
plessy at debian.org
Mon Aug 6 05:39:37 UTC 2012
The following commit has been merged in the meta branch:
commit 4d595d0b8754c2a180c58d41cb650238ad4df172
Author: Charles Plessy <plessy at debian.org>
Date: Mon Aug 6 14:37:43 2012 +0900
Build logs for r-bioc-limma 3.12.0~dfsg-1.
diff --git a/armel.log b/armel.log
index 746ced7..7c5bb0e 100644
--- a/armel.log
+++ b/armel.log
@@ -1,70 +1,61 @@
-From buildd at antheil.debian.org Wed Mar 07 05:04:51 2012
-Return-path: <buildd at antheil.debian.org>
+From buildd at arnold.debian.org Fri Jul 20 15:51:22 2012
+Return-path: <buildd at arnold.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
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CN=merikanto.debian.org,
EMAIL=hostmaster at merikanto.debian.org (verified)
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-Received: from antheil.islands.arm.com ([217.140.96.60]
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- CN=antheil.debian.org, EMAIL=hostmaster at antheil.debian.org (verified)
+ CN=arnold.debian.org, EMAIL=hostmaster at arnold.debian.org (verified)
by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at antheil.debian.org>)
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-Date: Wed, 07 Mar 2012 05:04:48 +0000
-Message-Id: <E1S593Q-0005rx-Oy at antheil.debian.org>
-From: buildd on antheil <buildd at antheil.debian.org>
-To: buildd-porters at antheil.debian.org,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on armel (dist=sid)
+ (Exim 4.72) (envelope-from <buildd at arnold.debian.org>)
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+Date: Fri, 20 Jul 2012 15:51:19 +0000
+Message-Id: <E1SsFU7-0000qz-SG at arnold.debian.org>
+From: buildd on arnold <buildd at arnold.debian.org>
+To: buildd-porters at arnold.debian.org,logs at buildd.debian.org
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on armel
+ (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on antheil.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on arnold.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (armel) 07 Mar 2012 04:55 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (armel) 20 Jul 2012 15:42 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: armel
-Get:1 http://incoming.debian.org unstable InRelease [197 kB]
-Get:2 http://ftp.uk.debian.org unstable InRelease [197 kB]
+Get:1 http://ftp.uk.debian.org unstable InRelease [249 kB]
+Get:2 http://incoming.debian.org unstable InRelease [249 kB]
+Get:3 http://ftp.uk.debian.org unstable/main Sources [6339 kB]
Ign http://incoming.debian.org InRelease
-Get:3 http://ftp.uk.debian.org unstable/main Sources [6231 kB]
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org Release [1616 B]
-Get:6 http://incoming.debian.org unstable/main Sources [6231 kB]
-Get:7 http://incoming.debian.org unstable/contrib Sources [55.0 kB]
-Get:8 http://incoming.debian.org unstable/non-free Sources [98.8 kB]
-Get:9 http://incoming.debian.org unstable/main armel Packages [5751 kB]
-Get:10 http://ftp.uk.debian.org unstable/contrib Sources [55.0 kB]
-Get:11 http://ftp.uk.debian.org unstable/non-free Sources [98.8 kB]
-Get:12 http://ftp.uk.debian.org unstable/main armel Packages [5751 kB]
-Get:13 http://ftp.uk.debian.org unstable/contrib armel Packages [36.9 kB]
-Ign http://ftp.uk.debian.org unstable/contrib TranslationIndex
-Get:14 http://ftp.uk.debian.org unstable/main TranslationIndex [2154 B]
-Get:15 http://ftp.uk.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:16 http://ftp.uk.debian.org unstable/main Translation-en [3906 kB]
-Get:17 http://incoming.debian.org unstable/contrib armel Packages [36.9 kB]
-Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:18 http://incoming.debian.org unstable/main TranslationIndex [2154 B]
-Get:19 http://incoming.debian.org Sources [63.4 kB]
-Get:20 http://incoming.debian.org Packages [849 kB]
-Get:21 http://incoming.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:22 http://incoming.debian.org unstable/main Translation-en [3906 kB]
-Ign http://incoming.debian.org Translation-en
-Fetched 33.5 MB in 1min 24s (395 kB/s)
+Get:5 http://incoming.debian.org unstable/main Sources [6339 kB]
+Get:6 http://ftp.uk.debian.org unstable/contrib Sources [54.8 kB]
+Get:7 http://ftp.uk.debian.org unstable/non-free Sources [97.9 kB]
+Get:8 http://ftp.uk.debian.org unstable/main armel Packages [5980 kB]
+Get:9 http://incoming.debian.org unstable/contrib Sources [54.8 kB]
+Get:10 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:11 http://incoming.debian.org unstable/main armel Packages [5980 kB]
+Get:12 http://ftp.uk.debian.org unstable/contrib armel Packages [37.8 kB]
+Get:13 http://incoming.debian.org unstable/contrib armel Packages [37.8 kB]
+Get:14 http://incoming.debian.org Release [1601 B]
+Get:15 http://incoming.debian.org Sources [14.2 kB]
+Get:16 http://incoming.debian.org Packages [156 kB]
+Fetched 25.7 MB in 1min 38s (260 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -85,11 +76,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 1s (931 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 0s (1068 kB/s)
Download complete and in download only mode
Check arch
@@ -103,18 +94,18 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5)
-fakeroot: already installed (1.18.2-1)
+fakeroot: already installed (1.18.4-2)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 13 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 13 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -123,470 +114,460 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
Checking for already installed dependencies...
-base-files: already installed (6.5)
-base-passwd: already installed (3.5.24)
-bash: already installed (4.2-1)
-coreutils: already installed (8.13-3)
-dash: already installed (0.5.7-2)
-debianutils: already installed (4.2.1)
-diffutils: already installed (1:3.2-1)
-dpkg: already installed (1.16.1.2)
-e2fsprogs: already installed (1.42-1)
+base-files: already installed (6.11)
+base-passwd: already installed (3.5.26)
+bash: already installed (4.2-3)
+coreutils: already installed (8.13-3.2)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3.2)
+diffutils: already installed (1:3.2-6)
+dpkg: already installed (1.16.7)
+e2fsprogs: already installed (1.42.4-3)
findutils: already installed (4.4.2-4)
-grep: already installed (2.10-1)
-gzip: already installed (1.4-2)
-hostname: already installed (3.10)
-ncurses-base: already installed (5.9-4)
-ncurses-bin: already installed (5.9-4)
-perl-base: already installed (5.14.2-7)
-sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-22)
-sysvinit: already installed (2.88dsf-22)
+grep: already installed (2.12-2)
+gzip: already installed (1.5-1.1)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-10)
+ncurses-bin: already installed (5.9-10)
+perl-base: already installed (5.14.2-12)
+sed: already installed (4.2.1-10)
+login: already installed (1:4.1.5.1-1)
+sysvinit-utils: already installed (2.88dsf-28)
+sysvinit: already installed (2.88dsf-28)
tar: already installed (1.26-4)
-bsdutils: already installed (1:2.20.1-1.2)
-mount: already installed (2.20.1-1.2)
-util-linux: already installed (2.20.1-1.2)
-libc6-dev: already installed (2.13-26)
-gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+bsdutils: already installed (1:2.20.1-5.1)
+mount: already installed (2.20.1-5.1)
+util-linux: already installed (2.20.1-5.1)
+libc6-dev: already installed (2.13-34)
+gcc: already installed (4:4.6.3-7 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-7 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.7 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120608
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.1-4
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
- gcc-4.6 gcc-4.6-base gettext gettext-base gfortran gfortran-4.6 groff-base
- html2text intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2
- libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgcc1
- libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libstdc++6 libstdc++6-4.6-dev libthai-data libthai0 libtiff4
+ bsdmainutils file fontconfig fontconfig-config gcc-4.7-base gettext
+ gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian
+ libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgcc1
+ libgettextpo0 libgfortran3 libglib2.0-0 libgomp1 libice6 libjbig0 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
+ libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
+ libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
+ libreadline6-dev libsm6 libstdc++6 libthai-data libthai0 libtiff4
libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
- libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip
- x11-common xdg-utils zip zlib1g zlib1g-dev
+ libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core ucf unzip
+ x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make curl
- defoma gcc-4.6-doc libstdc++6-4.6-dbg libmudflap0-4.6-dev libgcc1-dbg
- libgomp1-dbg libquadmath-dbg libmudflap0-dbg binutils-gold gettext-doc
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc
gfortran-doc gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
- r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ ttf-arphic-bkai00mp less www-browser libmail-box-perl r-doc-info r-doc-pdf
+ r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
- texi2html tclreadline gvfs-bin
+ texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext
+ bsdmainutils cdbs debhelper file fontconfig fontconfig-config gettext
gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian
- libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi5 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
- libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
- po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip
- x11-common xdg-utils zip zlib1g-dev
+ libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgettextpo0
+ libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango1.0-0
+ libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
+ libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
+ libsm6 libthai-data libthai0 libtiff4 libtinfo-dev libunistring0 libx11-6
+ libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
+ libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
+ r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
+ zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libgcc1 libgomp1 libstdc++6
- libstdc++6-4.6-dev zlib1g
-9 upgraded, 76 newly installed, 0 to remove and 35 not upgraded.
-Need to get 68.6 MB of archives.
-After this operation, 118 MB of additional disk space will be used.
-Get:1 http://ftp.uk.debian.org/debian/ unstable/main libgomp1 armel 4.6.3-1 [28.4 kB]
-Get:2 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.6-base armel 4.6.3-1 [139 kB]
-Get:3 http://ftp.uk.debian.org/debian/ unstable/main libgcc1 armel 1:4.6.3-1 [24.7 kB]
-Get:4 http://ftp.uk.debian.org/debian/ unstable/main cpp-4.6 armel 4.6.3-1 [4324 kB]
-Get:5 http://ftp.uk.debian.org/debian/ unstable/main libstdc++6-4.6-dev armel 4.6.3-1 [1709 kB]
-Get:6 http://ftp.uk.debian.org/debian/ unstable/main g++-4.6 armel 4.6.3-1 [5238 kB]
-Get:7 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.6 armel 4.6.3-1 [4544 kB]
-Get:8 http://ftp.uk.debian.org/debian/ unstable/main libstdc++6 armel 4.6.3-1 [289 kB]
-Get:9 http://ftp.uk.debian.org/debian/ unstable/main zlib1g armel 1:1.2.6.dfsg-2 [85.4 kB]
-Get:10 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 armel 1.2.1-1 [34.9 kB]
-Get:11 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armel 5.10-1 [250 kB]
-Get:12 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 armel 8.12-4 [223 kB]
-Get:13 http://ftp.uk.debian.org/debian/ unstable/main libexpat1 armel 2.0.1-7.2 [114 kB]
-Get:14 http://ftp.uk.debian.org/debian/ unstable/main libfreetype6 armel 2.4.8-1 [391 kB]
-Get:15 http://ftp.uk.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
-Get:16 http://ftp.uk.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
-Get:17 http://ftp.uk.debian.org/debian/ unstable/main libfontconfig1 armel 2.8.0-3.1 [271 kB]
-Get:18 http://ftp.uk.debian.org/debian/ unstable/main libpixman-1-0 armel 0.24.4-1 [397 kB]
-Get:19 http://ftp.uk.debian.org/debian/ unstable/main libpng12-0 armel 1.2.47-1 [182 kB]
-Get:20 http://ftp.uk.debian.org/debian/ unstable/main libxau6 armel 1:1.0.6-4+b1 [16.2 kB]
-Get:21 http://ftp.uk.debian.org/debian/ unstable/main libxdmcp6 armel 1:1.1.0-4 [21.9 kB]
-Get:22 http://ftp.uk.debian.org/debian/ unstable/main libxcb1 armel 1.8-2 [42.6 kB]
-Get:23 http://ftp.uk.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
-Get:24 http://ftp.uk.debian.org/debian/ unstable/main libx11-6 armel 2:1.4.4-4 [833 kB]
-Get:25 http://ftp.uk.debian.org/debian/ unstable/main libxcb-render0 armel 1.8-2 [16.2 kB]
-Get:26 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shm0 armel 1.8-2 [9742 B]
-Get:27 http://ftp.uk.debian.org/debian/ unstable/main libxrender1 armel 1:0.9.6-2 [30.4 kB]
-Get:28 http://ftp.uk.debian.org/debian/ unstable/main libcairo2 armel 1.10.2-7 [906 kB]
-Get:29 http://ftp.uk.debian.org/debian/ unstable/main libffi5 armel 3.0.10-3 [22.8 kB]
-Get:30 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armel 2.30.2-6 [1744 kB]
-Get:31 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armel 2.7.8.dfsg-7 [818 kB]
-Get:32 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armel 0.6.4-2 [140 kB]
-Get:33 http://ftp.uk.debian.org/debian/ unstable/main libdatrie1 armel 0.2.5-3 [26.6 kB]
-Get:34 http://ftp.uk.debian.org/debian/ unstable/main libgfortran3 armel 4.6.3-1 [254 kB]
-Get:35 http://ftp.uk.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
-Get:36 http://ftp.uk.debian.org/debian/ unstable/main libice6 armel 2:1.0.7-2 [50.1 kB]
-Get:37 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8 armel 8d-1 [153 kB]
-Get:38 http://ftp.uk.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
-Get:39 http://ftp.uk.debian.org/debian/ unstable/main libthai0 armel 0.1.17-1 [42.5 kB]
-Get:40 http://ftp.uk.debian.org/debian/ unstable/main libxft2 armel 2.2.0-3 [53.7 kB]
-Get:41 http://ftp.uk.debian.org/debian/ unstable/main fontconfig armel 2.8.0-3.1 [334 kB]
-Get:42 http://ftp.uk.debian.org/debian/ unstable/main libpango1.0-0 armel 1.29.4-2 [422 kB]
-Get:43 http://ftp.uk.debian.org/debian/ unstable/main libpcrecpp0 armel 8.12-4 [111 kB]
-Get:44 http://ftp.uk.debian.org/debian/ unstable/main libsm6 armel 2:1.2.0-2 [28.1 kB]
-Get:45 http://ftp.uk.debian.org/debian/ unstable/main libtiff4 armel 3.9.6-1 [189 kB]
-Get:46 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armel 0.9.3-5 [406 kB]
-Get:47 http://ftp.uk.debian.org/debian/ unstable/main libxext6 armel 2:1.3.0-3 [46.0 kB]
-Get:48 http://ftp.uk.debian.org/debian/ unstable/main libxss1 armel 1:1.2.1-2 [16.0 kB]
-Get:49 http://ftp.uk.debian.org/debian/ unstable/main libxt6 armel 1:1.1.1-2 [177 kB]
-Get:50 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armel 9.0.1 [208 kB]
-Get:51 http://ftp.uk.debian.org/debian/ unstable/main groff-base armel 1.21-6 [1072 kB]
-Get:52 http://ftp.uk.debian.org/debian/ unstable/main man-db armel 2.6.1-1 [1030 kB]
-Get:53 http://ftp.uk.debian.org/debian/ unstable/main file armel 5.10-1 [52.7 kB]
-Get:54 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armel 0.18.1.1-5 [138 kB]
-Get:55 http://ftp.uk.debian.org/debian/ unstable/main cdbs all 0.4.105 [78.7 kB]
+ gcc-4.7-base libgcc1 libgomp1 libstdc++6
+4 upgraded, 79 newly installed, 0 to remove and 9 not upgraded.
+Need to get 53.7 MB of archives.
+After this operation, 119 MB of additional disk space will be used.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main libgomp1 armel 4.7.1-5 [30.9 kB]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.7-base armel 4.7.1-5 [141 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main libstdc++6 armel 4.7.1-5 [288 kB]
+Get:4 http://ftp.uk.debian.org/debian/ unstable/main libgcc1 armel 1:4.7.1-5 [56.6 kB]
+Get:5 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 armel 1.2.1-1 [34.9 kB]
+Get:6 http://ftp.uk.debian.org/debian/ unstable/main libasprintf0c2 armel 0.18.1.1-9 [26.4 kB]
+Get:7 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armel 5.11-2 [200 kB]
+Get:8 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 armel 1:8.30-5 [241 kB]
+Get:9 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armel 2.8.0+dfsg1-4 [824 kB]
+Get:10 http://ftp.uk.debian.org/debian/ unstable/main libexpat1 armel 2.1.0-1 [116 kB]
+Get:11 http://ftp.uk.debian.org/debian/ unstable/main libfreetype6 armel 2.4.9-1 [401 kB]
+Get:12 http://ftp.uk.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
+Get:13 http://ftp.uk.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:14 http://ftp.uk.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-6 [232 kB]
+Get:15 http://ftp.uk.debian.org/debian/ unstable/main libfontconfig1 armel 2.9.0-6 [287 kB]
+Get:16 http://ftp.uk.debian.org/debian/ unstable/main libpixman-1-0 armel 0.26.0-3 [414 kB]
+Get:17 http://ftp.uk.debian.org/debian/ unstable/main libpng12-0 armel 1.2.49-2 [182 kB]
+Get:18 http://ftp.uk.debian.org/debian/ unstable/main libxau6 armel 1:1.0.7-1 [17.6 kB]
+Get:19 http://ftp.uk.debian.org/debian/ unstable/main libxdmcp6 armel 1:1.1.1-1 [25.3 kB]
+Get:20 http://ftp.uk.debian.org/debian/ unstable/main libxcb1 armel 1.8.1-1 [42.8 kB]
+Get:21 http://ftp.uk.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
+Get:22 http://ftp.uk.debian.org/debian/ unstable/main libx11-6 armel 2:1.5.0-1 [840 kB]
+Get:23 http://ftp.uk.debian.org/debian/ unstable/main libxcb-render0 armel 1.8.1-1 [16.2 kB]
+Get:24 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shm0 armel 1.8.1-1 [9770 B]
+Get:25 http://ftp.uk.debian.org/debian/ unstable/main libxrender1 armel 1:0.9.7-1 [30.7 kB]
+Get:26 http://ftp.uk.debian.org/debian/ unstable/main libcairo2 armel 1.12.2-2 [866 kB]
+Get:27 http://ftp.uk.debian.org/debian/ unstable/main libffi5 armel 3.0.10-3 [22.8 kB]
+Get:28 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armel 2.32.3-1 [1962 kB]
+Get:29 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armel 0.6.5-1 [142 kB]
+Get:30 http://ftp.uk.debian.org/debian/ unstable/main libdatrie1 armel 0.2.5-3 [26.6 kB]
+Get:31 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armel 0.9.3-5 [406 kB]
+Get:32 http://ftp.uk.debian.org/debian/ unstable/main libgettextpo0 armel 0.18.1.1-9 [132 kB]
+Get:33 http://ftp.uk.debian.org/debian/ unstable/main libgfortran3 armel 4.7.1-5 [247 kB]
+Get:34 http://ftp.uk.debian.org/debian/ unstable/main x11-common all 1:7.7+1 [278 kB]
+Get:35 http://ftp.uk.debian.org/debian/ unstable/main libice6 armel 2:1.0.8-2 [56.5 kB]
+Get:36 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8 armel 8d-1 [153 kB]
+Get:37 http://ftp.uk.debian.org/debian/ unstable/main libthai-data all 0.1.18-1 [205 kB]
+Get:38 http://ftp.uk.debian.org/debian/ unstable/main libthai0 armel 0.1.18-1 [42.6 kB]
+Get:39 http://ftp.uk.debian.org/debian/ unstable/main libxft2 armel 2.3.1-1 [56.6 kB]
+Get:40 http://ftp.uk.debian.org/debian/ unstable/main fontconfig armel 2.9.0-6 [349 kB]
+Get:41 http://ftp.uk.debian.org/debian/ unstable/main libpango1.0-0 armel 1.30.0-1 [429 kB]
+Get:42 http://ftp.uk.debian.org/debian/ unstable/main libpaper1 armel 1.1.24+nmu2 [22.8 kB]
+Get:43 http://ftp.uk.debian.org/debian/ unstable/main libpcrecpp0 armel 1:8.30-5 [124 kB]
+Get:44 http://ftp.uk.debian.org/debian/ unstable/main libsm6 armel 2:1.2.1-2 [32.5 kB]
+Get:45 http://ftp.uk.debian.org/debian/ unstable/main libjbig0 armel 2.0-2 [30.9 kB]
+Get:46 http://ftp.uk.debian.org/debian/ unstable/main libtiff4 armel 3.9.6-6 [190 kB]
+Get:47 http://ftp.uk.debian.org/debian/ unstable/main libxext6 armel 2:1.3.1-2 [48.8 kB]
+Get:48 http://ftp.uk.debian.org/debian/ unstable/main libxss1 armel 1:1.2.2-1 [16.6 kB]
+Get:49 http://ftp.uk.debian.org/debian/ unstable/main libxt6 armel 1:1.1.3-1 [180 kB]
+Get:50 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armel 9.0.3 [208 kB]
+Get:51 http://ftp.uk.debian.org/debian/ unstable/main groff-base armel 1.21-9 [1079 kB]
+Get:52 http://ftp.uk.debian.org/debian/ unstable/main man-db armel 2.6.2-1 [1025 kB]
+Get:53 http://ftp.uk.debian.org/debian/ unstable/main file armel 5.11-2 [51.4 kB]
+Get:54 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armel 0.18.1.1-9 [138 kB]
+Get:55 http://ftp.uk.debian.org/debian/ unstable/main cdbs all 0.4.116 [79.9 kB]
Get:56 http://ftp.uk.debian.org/debian/ unstable/main html2text armel 1.3.2a-15 [97.0 kB]
-Get:57 http://ftp.uk.debian.org/debian/ unstable/main gettext armel 0.18.1.1-5 [1980 kB]
+Get:57 http://ftp.uk.debian.org/debian/ unstable/main gettext armel 0.18.1.1-9 [1888 kB]
Get:58 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
Get:59 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:60 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20120115 [693 kB]
-Get:61 http://ftp.uk.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
-Get:62 http://ftp.uk.debian.org/debian/ unstable/main gfortran-4.6 armel 4.6.3-1 [4920 kB]
-Get:63 http://ftp.uk.debian.org/debian/ unstable/main gfortran armel 4:4.6.2-4 [1126 B]
-Get:64 http://ftp.uk.debian.org/debian/ unstable/main libblas3gf armel 1.2.20110419-2 [278 kB]
-Get:65 http://ftp.uk.debian.org/debian/ unstable/main libblas-dev armel 1.2.20110419-2 [287 kB]
-Get:66 http://ftp.uk.debian.org/debian/ unstable/main libbz2-dev armel 1.0.6-1 [33.6 kB]
-Get:67 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8-dev armel 8d-1 [260 kB]
-Get:68 http://ftp.uk.debian.org/debian/ unstable/main liblapack3gf armel 3.3.1-1 [2200 kB]
-Get:69 http://ftp.uk.debian.org/debian/ unstable/main liblapack-dev armel 3.3.1-1 [2374 kB]
-Get:70 http://ftp.uk.debian.org/debian/ unstable/main libtinfo-dev armel 5.9-4 [90.5 kB]
-Get:71 http://ftp.uk.debian.org/debian/ unstable/main libncurses5-dev armel 5.9-4 [388 kB]
-Get:72 http://ftp.uk.debian.org/debian/ unstable/main libpaper1 armel 1.1.24+nmu1 [22.6 kB]
-Get:73 http://ftp.uk.debian.org/debian/ unstable/main libpaper-utils armel 1.1.24+nmu1 [18.7 kB]
-Get:74 http://ftp.uk.debian.org/debian/ unstable/main libpcre3-dev armel 8.12-4 [301 kB]
-Get:75 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armel 1:1.2.6.dfsg-2 [209 kB]
-Get:76 http://ftp.uk.debian.org/debian/ unstable/main libpng12-dev armel 1.2.47-1 [261 kB]
-Get:77 http://ftp.uk.debian.org/debian/ unstable/main libreadline6-dev armel 6.2-8 [238 kB]
-Get:78 http://ftp.uk.debian.org/debian/ unstable/main libreadline-dev armel 6.2-8 [890 B]
-Get:79 http://ftp.uk.debian.org/debian/ unstable/main zip armel 3.0-4 [329 kB]
-Get:80 http://ftp.uk.debian.org/debian/ unstable/main unzip armel 6.0-5 [190 kB]
-Get:81 http://ftp.uk.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
-Get:82 http://ftp.uk.debian.org/debian/ unstable/main tcl8.5 armel 8.5.11-1 [1565 kB]
-Get:83 http://ftp.uk.debian.org/debian/ unstable/main tk8.5 armel 8.5.11-1 [1129 kB]
-Get:84 http://ftp.uk.debian.org/debian/ unstable/main r-base-core armel 2.14.2-1 [20.1 MB]
-Get:85 http://ftp.uk.debian.org/debian/ unstable/main r-base-dev all 2.14.2-1 [3894 B]
+Get:60 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20120608 [700 kB]
+Get:61 http://ftp.uk.debian.org/debian/ unstable/main gfortran-4.6 armel 4.6.3-8 [4918 kB]
+Get:62 http://ftp.uk.debian.org/debian/ unstable/main gfortran armel 4:4.6.3-7 [1132 B]
+Get:63 http://ftp.uk.debian.org/debian/ unstable/main libblas3 armel 1.2.20110419-5 [273 kB]
+Get:64 http://ftp.uk.debian.org/debian/ unstable/main libblas-dev armel 1.2.20110419-5 [279 kB]
+Get:65 http://ftp.uk.debian.org/debian/ unstable/main libbz2-dev armel 1.0.6-3 [34.1 kB]
+Get:66 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8-dev armel 8d-1 [260 kB]
+Get:67 http://ftp.uk.debian.org/debian/ unstable/main liblapack3 armel 3.4.1-5 [2216 kB]
+Get:68 http://ftp.uk.debian.org/debian/ unstable/main liblapack-dev armel 3.4.1-5 [2561 kB]
+Get:69 http://ftp.uk.debian.org/debian/ unstable/main libtinfo-dev armel 5.9-10 [90.3 kB]
+Get:70 http://ftp.uk.debian.org/debian/ unstable/main libncurses5-dev armel 5.9-10 [205 kB]
+Get:71 http://ftp.uk.debian.org/debian/ unstable/main libpaper-utils armel 1.1.24+nmu2 [18.8 kB]
+Get:72 http://ftp.uk.debian.org/debian/ unstable/main libpcre3-dev armel 1:8.30-5 [343 kB]
+Get:73 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armel 1:1.2.7.dfsg-13 [211 kB]
+Get:74 http://ftp.uk.debian.org/debian/ unstable/main libpng12-dev armel 1.2.49-2 [261 kB]
+Get:75 http://ftp.uk.debian.org/debian/ unstable/main libreadline6-dev armel 6.2-8 [238 kB]
+Get:76 http://ftp.uk.debian.org/debian/ unstable/main libreadline-dev armel 6.2-8 [890 B]
+Get:77 http://ftp.uk.debian.org/debian/ unstable/main zip armel 3.0-6 [333 kB]
+Get:78 http://ftp.uk.debian.org/debian/ unstable/main unzip armel 6.0-7 [193 kB]
+Get:79 http://ftp.uk.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:80 http://ftp.uk.debian.org/debian/ unstable/main tcl8.5 armel 8.5.11-2 [1573 kB]
+Get:81 http://ftp.uk.debian.org/debian/ unstable/main tk8.5 armel 8.5.11-2 [1132 kB]
+Get:82 http://ftp.uk.debian.org/debian/ unstable/main r-base-core armel 2.15.1-4 [20.7 MB]
+Get:83 http://ftp.uk.debian.org/debian/ unstable/main r-base-dev all 2.15.1-4 [3882 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 68.6 MB in 10s (6254 kB/s)
-(Reading database ... 10578 files and directories currently installed.)
-Preparing to replace libgomp1 4.6.2-12 (using .../libgomp1_4.6.3-1_armel.deb) ...
-Unpacking replacement libgomp1 ...
-Preparing to replace gcc-4.6-base 4.6.2-12 (using .../gcc-4.6-base_4.6.3-1_armel.deb) ...
-Unpacking replacement gcc-4.6-base ...
-Setting up gcc-4.6-base (4.6.3-1) ...
-(Reading database ... 10579 files and directories currently installed.)
-Preparing to replace libgcc1 1:4.6.2-12 (using .../libgcc1_1%3a4.6.3-1_armel.deb) ...
-Unpacking replacement libgcc1 ...
-Setting up libgcc1 (1:4.6.3-1) ...
-(Reading database ... 10579 files and directories currently installed.)
-Preparing to replace cpp-4.6 4.6.2-12 (using .../cpp-4.6_4.6.3-1_armel.deb) ...
-Unpacking replacement cpp-4.6 ...
-Preparing to replace libstdc++6-4.6-dev 4.6.2-12 (using .../libstdc++6-4.6-dev_4.6.3-1_armel.deb) ...
-Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.2-12 (using .../g++-4.6_4.6.3-1_armel.deb) ...
-Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.2-12 (using .../gcc-4.6_4.6.3-1_armel.deb) ...
-Unpacking replacement gcc-4.6 ...
-Preparing to replace libstdc++6 4.6.2-12 (using .../libstdc++6_4.6.3-1_armel.deb) ...
-Unpacking replacement libstdc++6 ...
-Setting up libstdc++6 (4.6.3-1) ...
-(Reading database ... 10579 files and directories currently installed.)
-Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.6.dfsg-2_armel.deb) ...
-Unpacking replacement zlib1g ...
-Setting up zlib1g (1:1.2.6.dfsg-2) ...
-Selecting previously unselected package libpipeline1.
-(Reading database ... 10579 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_armel.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_armel.deb) ...
-Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-4_armel.deb) ...
-Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_armel.deb) ...
-Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_armel.deb) ...
+Fetched 53.7 MB in 26s (2048 kB/s)
+(Reading database ... 10636 files and directories currently installed.)
+Preparing to replace libgomp1:armel 4.7.1-2 (using .../libgomp1_4.7.1-5_armel.deb) ...
+Unpacking replacement libgomp1:armel ...
+Preparing to replace gcc-4.7-base:armel 4.7.1-2 (using .../gcc-4.7-base_4.7.1-5_armel.deb) ...
+Unpacking replacement gcc-4.7-base:armel ...
+Setting up gcc-4.7-base:armel (4.7.1-5) ...
+(Reading database ... 10636 files and directories currently installed.)
+Preparing to replace libstdc++6:armel 4.7.1-2 (using .../libstdc++6_4.7.1-5_armel.deb) ...
+Unpacking replacement libstdc++6:armel ...
+Setting up libstdc++6:armel (4.7.1-5) ...
+(Reading database ... 10636 files and directories currently installed.)
+Preparing to replace libgcc1:armel 1:4.7.1-2 (using .../libgcc1_1%3a4.7.1-5_armel.deb) ...
+Unpacking replacement libgcc1:armel ...
+Setting up libgcc1:armel (1:4.7.1-5) ...
+Selecting previously unselected package libpipeline1:armel.
+(Reading database ... 10636 files and directories currently installed.)
+Unpacking libpipeline1:armel (from .../libpipeline1_1.2.1-1_armel.deb) ...
+Selecting previously unselected package libasprintf0c2:armel.
+Unpacking libasprintf0c2:armel (from .../libasprintf0c2_0.18.1.1-9_armel.deb) ...
+Selecting previously unselected package libmagic1:armel.
+Unpacking libmagic1:armel (from .../libmagic1_5.11-2_armel.deb) ...
+Selecting previously unselected package libpcre3:armel.
+Unpacking libpcre3:armel (from .../libpcre3_1%3a8.30-5_armel.deb) ...
+Selecting previously unselected package libxml2:armel.
+Unpacking libxml2:armel (from .../libxml2_2.8.0+dfsg1-4_armel.deb) ...
+Selecting previously unselected package libexpat1:armel.
+Unpacking libexpat1:armel (from .../libexpat1_2.1.0-1_armel.deb) ...
+Selecting previously unselected package libfreetype6:armel.
+Unpacking libfreetype6:armel (from .../libfreetype6_2.4.9-1_armel.deb) ...
+Selecting previously unselected package ucf.
+Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Moving old data out of the way
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3.1_all.deb) ...
-Selecting previously unselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_armel.deb) ...
-Selecting previously unselected package libpixman-1-0.
-Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_armel.deb) ...
-Selecting previously unselected package libpng12-0.
-Unpacking libpng12-0 (from .../libpng12-0_1.2.47-1_armel.deb) ...
-Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4+b1_armel.deb) ...
-Selecting previously unselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_armel.deb) ...
-Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_armel.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-6_all.deb) ...
+Selecting previously unselected package libfontconfig1:armel.
+Unpacking libfontconfig1:armel (from .../libfontconfig1_2.9.0-6_armel.deb) ...
+Selecting previously unselected package libpixman-1-0:armel.
+Unpacking libpixman-1-0:armel (from .../libpixman-1-0_0.26.0-3_armel.deb) ...
+Selecting previously unselected package libpng12-0:armel.
+Unpacking libpng12-0:armel (from .../libpng12-0_1.2.49-2_armel.deb) ...
+Selecting previously unselected package libxau6:armel.
+Unpacking libxau6:armel (from .../libxau6_1%3a1.0.7-1_armel.deb) ...
+Selecting previously unselected package libxdmcp6:armel.
+Unpacking libxdmcp6:armel (from .../libxdmcp6_1%3a1.1.1-1_armel.deb) ...
+Selecting previously unselected package libxcb1:armel.
+Unpacking libxcb1:armel (from .../libxcb1_1.8.1-1_armel.deb) ...
Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
-Selecting previously unselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_armel.deb) ...
-Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_armel.deb) ...
-Selecting previously unselected package libxcb-shm0.
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-Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_armel.deb) ...
-Selecting previously unselected package libcairo2.
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-Selecting previously unselected package libglib2.0-0.
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-Selecting previously unselected package libdatrie1.
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-Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_armel.deb) ...
+Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:armel.
+Unpacking libx11-6:armel (from .../libx11-6_2%3a1.5.0-1_armel.deb) ...
+Selecting previously unselected package libxcb-render0:armel.
+Unpacking libxcb-render0:armel (from .../libxcb-render0_1.8.1-1_armel.deb) ...
+Selecting previously unselected package libxcb-shm0:armel.
+Unpacking libxcb-shm0:armel (from .../libxcb-shm0_1.8.1-1_armel.deb) ...
+Selecting previously unselected package libxrender1:armel.
+Unpacking libxrender1:armel (from .../libxrender1_1%3a0.9.7-1_armel.deb) ...
+Selecting previously unselected package libcairo2:armel.
+Unpacking libcairo2:armel (from .../libcairo2_1.12.2-2_armel.deb) ...
+Selecting previously unselected package libffi5:armel.
+Unpacking libffi5:armel (from .../libffi5_3.0.10-3_armel.deb) ...
+Selecting previously unselected package libglib2.0-0:armel.
+Unpacking libglib2.0-0:armel (from .../libglib2.0-0_2.32.3-1_armel.deb) ...
+Selecting previously unselected package libcroco3:armel.
+Unpacking libcroco3:armel (from .../libcroco3_0.6.5-1_armel.deb) ...
+Selecting previously unselected package libdatrie1:armel.
+Unpacking libdatrie1:armel (from .../libdatrie1_0.2.5-3_armel.deb) ...
+Selecting previously unselected package libunistring0:armel.
+Unpacking libunistring0:armel (from .../libunistring0_0.9.3-5_armel.deb) ...
+Selecting previously unselected package libgettextpo0:armel.
+Unpacking libgettextpo0:armel (from .../libgettextpo0_0.18.1.1-9_armel.deb) ...
+Selecting previously unselected package libgfortran3:armel.
+Unpacking libgfortran3:armel (from .../libgfortran3_4.7.1-5_armel.deb) ...
Selecting previously unselected package x11-common.
-Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
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-Selecting previously unselected package libjpeg8.
-Unpacking libjpeg8 (from .../libjpeg8_8d-1_armel.deb) ...
+Unpacking x11-common (from .../x11-common_1%3a7.7+1_all.deb) ...
+Selecting previously unselected package libice6:armel.
+Unpacking libice6:armel (from .../libice6_2%3a1.0.8-2_armel.deb) ...
+Selecting previously unselected package libjpeg8:armel.
+Unpacking libjpeg8:armel (from .../libjpeg8_8d-1_armel.deb) ...
Selecting previously unselected package libthai-data.
-Unpacking libthai-data (from .../libthai-data_0.1.17-1_all.deb) ...
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-Selecting previously unselected package libxft2.
-Unpacking libxft2 (from .../libxft2_2.2.0-3_armel.deb) ...
+Unpacking libthai-data (from .../libthai-data_0.1.18-1_all.deb) ...
+Selecting previously unselected package libthai0:armel.
+Unpacking libthai0:armel (from .../libthai0_0.1.18-1_armel.deb) ...
+Selecting previously unselected package libxft2:armel.
+Unpacking libxft2:armel (from .../libxft2_2.3.1-1_armel.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_armel.deb) ...
-Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_armel.deb) ...
-Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_armel.deb) ...
-Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_armel.deb) ...
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-Selecting previously unselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-5_armel.deb) ...
-Selecting previously unselected package libxext6.
-Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3_armel.deb) ...
-Selecting previously unselected package libxss1.
-Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_armel.deb) ...
-Selecting previously unselected package libxt6.
-Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_armel.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.9.0-6_armel.deb) ...
+Selecting previously unselected package libpango1.0-0:armel.
+Unpacking libpango1.0-0:armel (from .../libpango1.0-0_1.30.0-1_armel.deb) ...
+Selecting previously unselected package libpaper1:armel.
+Unpacking libpaper1:armel (from .../libpaper1_1.1.24+nmu2_armel.deb) ...
+Selecting previously unselected package libpcrecpp0:armel.
+Unpacking libpcrecpp0:armel (from .../libpcrecpp0_1%3a8.30-5_armel.deb) ...
+Selecting previously unselected package libsm6:armel.
+Unpacking libsm6:armel (from .../libsm6_2%3a1.2.1-2_armel.deb) ...
+Selecting previously unselected package libjbig0:armel.
+Unpacking libjbig0:armel (from .../libjbig0_2.0-2_armel.deb) ...
+Selecting previously unselected package libtiff4:armel.
+Unpacking libtiff4:armel (from .../libtiff4_3.9.6-6_armel.deb) ...
+Selecting previously unselected package libxext6:armel.
+Unpacking libxext6:armel (from .../libxext6_2%3a1.3.1-2_armel.deb) ...
+Selecting previously unselected package libxss1:armel.
+Unpacking libxss1:armel (from .../libxss1_1%3a1.2.2-1_armel.deb) ...
+Selecting previously unselected package libxt6:armel.
+Unpacking libxt6:armel (from .../libxt6_1%3a1.1.3-1_armel.deb) ...
Selecting previously unselected package bsdmainutils.
-Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_armel.deb) ...
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.3_armel.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6_armel.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-9_armel.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_armel.deb) ...
+Unpacking man-db (from .../man-db_2.6.2-1_armel.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.10-1_armel.deb) ...
+Unpacking file (from .../archives/file_5.11-2_armel.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_armel.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-9_armel.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.116_all.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_armel.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5_armel.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-9_armel.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
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-Selecting previously unselected package dpatch.
-Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120608_all.deb) ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_armel.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-8_armel.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_armel.deb) ...
-Selecting previously unselected package libblas3gf.
-Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_armel.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-7_armel.deb) ...
+Selecting previously unselected package libblas3.
+Unpacking libblas3 (from .../libblas3_1.2.20110419-5_armel.deb) ...
Selecting previously unselected package libblas-dev.
-Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-2_armel.deb) ...
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-Selecting previously unselected package libjpeg8-dev.
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-Selecting previously unselected package liblapack3gf.
-Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_armel.deb) ...
+Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-5_armel.deb) ...
+Selecting previously unselected package libbz2-dev:armel.
+Unpacking libbz2-dev:armel (from .../libbz2-dev_1.0.6-3_armel.deb) ...
+Selecting previously unselected package libjpeg8-dev:armel.
+Unpacking libjpeg8-dev:armel (from .../libjpeg8-dev_8d-1_armel.deb) ...
+Selecting previously unselected package liblapack3.
+Unpacking liblapack3 (from .../liblapack3_3.4.1-5_armel.deb) ...
Selecting previously unselected package liblapack-dev.
-Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_armel.deb) ...
-Selecting previously unselected package libtinfo-dev.
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+Unpacking liblapack-dev (from .../liblapack-dev_3.4.1-5_armel.deb) ...
+Selecting previously unselected package libtinfo-dev:armel.
+Unpacking libtinfo-dev:armel (from .../libtinfo-dev_5.9-10_armel.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_armel.deb) ...
-Selecting previously unselected package libpaper1.
-Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_armel.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-10_armel.deb) ...
Selecting previously unselected package libpaper-utils.
-Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_armel.deb) ...
+Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_armel.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_armel.deb) ...
-Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_armel.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-5_armel.deb) ...
+Selecting previously unselected package zlib1g-dev:armel.
+Unpacking zlib1g-dev:armel (from .../zlib1g-dev_1%3a1.2.7.dfsg-13_armel.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_armel.deb) ...
-Selecting previously unselected package libreadline6-dev.
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-Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_armel.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-2_armel.deb) ...
+Selecting previously unselected package libreadline6-dev:armel.
+Unpacking libreadline6-dev:armel (from .../libreadline6-dev_6.2-8_armel.deb) ...
+Selecting previously unselected package libreadline-dev:armel.
+Unpacking libreadline-dev:armel (from .../libreadline-dev_6.2-8_armel.deb) ...
Selecting previously unselected package zip.
-Unpacking zip (from .../archives/zip_3.0-4_armel.deb) ...
+Unpacking zip (from .../archives/zip_3.0-6_armel.deb) ...
Selecting previously unselected package unzip.
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+Unpacking unzip (from .../archives/unzip_6.0-7_armel.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_armel.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_armel.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-1_armel.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.11-2_armel.deb) ...
Selecting previously unselected package r-base-core.
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+Unpacking r-base-core (from .../r-base-core_2.15.1-4_armel.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libgomp1 (4.6.3-1) ...
-Setting up cpp-4.6 (4.6.3-1) ...
-Setting up gcc-4.6 (4.6.3-1) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libpcre3 (8.12-4) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.1-4_all.deb) ...
+Setting up libgomp1:armel (4.7.1-5) ...
+Setting up libpipeline1:armel (1.2.1-1) ...
+Setting up libasprintf0c2:armel (0.18.1.1-9) ...
+Setting up libmagic1:armel (5.11-2) ...
+Setting up libpcre3:armel (1:8.30-5) ...
+Setting up libxml2:armel (2.8.0+dfsg1-4) ...
+Setting up libexpat1:armel (2.1.0-1) ...
+Setting up libfreetype6:armel (2.4.9-1) ...
+Setting up ucf (3.0025+nmu3) ...
Setting up ttf-dejavu-core (2.33-2) ...
-Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libpng12-0 (1.2.47-1) ...
-Setting up libxau6 (1:1.0.6-4+b1) ...
-Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
-Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up fontconfig-config (2.9.0-6) ...
+Setting up libfontconfig1:armel (2.9.0-6) ...
+Setting up libpixman-1-0:armel (0.26.0-3) ...
+Setting up libpng12-0:armel (1.2.49-2) ...
+Setting up libxau6:armel (1:1.0.7-1) ...
+Setting up libxdmcp6:armel (1:1.1.1-1) ...
+Setting up libxcb1:armel (1.8.1-1) ...
+Setting up libx11-data (2:1.5.0-1) ...
+Setting up libx11-6:armel (2:1.5.0-1) ...
+Setting up libxcb-render0:armel (1.8.1-1) ...
+Setting up libxcb-shm0:armel (1.8.1-1) ...
+Setting up libxrender1:armel (1:0.9.7-1) ...
+Setting up libcairo2:armel (1.12.2-2) ...
+Setting up libffi5:armel (3.0.10-3) ...
+Setting up libglib2.0-0:armel (2.32.3-1) ...
No schema files found: doing nothing.
-Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
-Setting up x11-common (1:7.6+12) ...
+Setting up libcroco3:armel (0.6.5-1) ...
+Setting up libdatrie1:armel (0.2.5-3) ...
+Setting up libunistring0:armel (0.9.3-5) ...
+Setting up libgettextpo0:armel (0.18.1.1-9) ...
+Setting up libgfortran3:armel (4.7.1-5) ...
+Setting up x11-common (1:7.7+1) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
-Setting up libjpeg8 (8d-1) ...
-Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3) ...
-Setting up fontconfig (2.8.0-3.1) ...
+Setting up libice6:armel (2:1.0.8-2) ...
+Setting up libjpeg8:armel (8d-1) ...
+Setting up libthai-data (0.1.18-1) ...
+Setting up libthai0:armel (0.1.18-1) ...
+Setting up libxft2:armel (2.3.1-1) ...
+Setting up fontconfig (2.9.0-6) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5) ...
-Setting up libxext6 (2:1.3.0-3) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2) ...
-Setting up bsdmainutils (9.0.1) ...
-update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
-update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.1-1) ...
+Setting up libpango1.0-0:armel (1.30.0-1) ...
+Setting up libpaper1:armel (1.1.24+nmu2) ...
+
+Creating config file /etc/papersize with new version
+Setting up libpcrecpp0:armel (1:8.30-5) ...
+Setting up libsm6:armel (2:1.2.1-2) ...
+Setting up libjbig0:armel (2.0-2) ...
+Setting up libtiff4:armel (3.9.6-6) ...
+Setting up libxext6:armel (2:1.3.1-2) ...
+Setting up libxss1:armel (1:1.2.2-1) ...
+Setting up libxt6:armel (1:1.1.3-1) ...
+Setting up bsdmainutils (9.0.3) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
+Setting up groff-base (1.21-9) ...
+Setting up man-db (2.6.2-1) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
-Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up file (5.11-2) ...
+Setting up gettext-base (0.18.1.1-9) ...
+Setting up cdbs (0.4.116) ...
Setting up html2text (1.3.2a-15) ...
-Setting up gettext (0.18.1.1-5) ...
+Setting up gettext (0.18.1.1-9) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
-Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
-update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
-Setting up libblas3gf (1.2.20110419-2) ...
-update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
-Setting up libblas-dev (1.2.20110419-2) ...
-update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
-Setting up liblapack3gf (3.3.1-1) ...
-update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
-Setting up liblapack-dev (3.3.1-1) ...
-update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
-Setting up libpaper1 (1.1.24+nmu1) ...
-
-Creating config file /etc/papersize with new version
-Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8) ...
-Setting up libreadline-dev (6.2-8) ...
-Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up debhelper (9.20120608) ...
+Setting up gfortran-4.6 (4.6.3-8) ...
+Setting up gfortran (4:4.6.3-7) ...
+update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
+Setting up libblas3 (1.2.20110419-5) ...
+update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
+Setting up libblas-dev (1.2.20110419-5) ...
+update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
+Setting up libbz2-dev:armel (1.0.6-3) ...
+Setting up libjpeg8-dev:armel (8d-1) ...
+Setting up liblapack3 (3.4.1-5) ...
+update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
+Setting up liblapack-dev (3.4.1-5) ...
+update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
+Setting up libtinfo-dev:armel (5.9-10) ...
+Setting up libncurses5-dev (5.9-10) ...
+Setting up libpaper-utils (1.1.24+nmu2) ...
+Setting up libpcre3-dev (1:8.30-5) ...
+Setting up zlib1g-dev:armel (1:1.2.7.dfsg-13) ...
+Setting up libpng12-dev (1.2.49-2) ...
+Setting up libreadline6-dev:armel (6.2-8) ...
+Setting up libreadline-dev:armel (6.2-8) ...
+Setting up zip (3.0-6) ...
+Setting up unzip (6.0-7) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
-Setting up tcl8.5 (8.5.11-1) ...
-update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
-Setting up tk8.5 (8.5.11-1) ...
-update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up tcl8.5 (8.5.11-2) ...
+update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
+Setting up tk8.5 (8.5.11-2) ...
+update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
+Setting up r-base-core (2.15.1-4) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
-Setting up libstdc++6-4.6-dev (4.6.3-1) ...
-Setting up g++-4.6 (4.6.3-1) ...
+Setting up r-base-dev (2.15.1-4) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 35 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32 armel (armv5tel)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-26 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.2-1
-Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-26 libc-dev-bin_2.13-26 libc6_2.13-26 libc6-dev_2.13-26 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.3+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libncurses5-dev_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42-1 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4+b1 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.2-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-26 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-7 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-1.2 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6.1 dpkg-dev_1.16.7 g++-4.6_4.6.3-8 gcc-4.6_4.6.3-8 libc6-dev_2.13-34 libstdc++6_4.7.1-5 libstdc++6-4.6-dev_4.6.3-8 linux-libc-dev_3.2.21-2
+Package versions: apt_0.9.7.1 base-files_6.11 base-passwd_3.5.26 bash_4.2-3 binutils_2.22-6.1 bsdmainutils_9.0.3 bsdutils_1:2.20.1-5.1 build-essential_11.5 bzip2_1.0.6-3 cdbs_0.4.116 coreutils_8.13-3.2 cpp_4:4.6.3-7 cpp-4.6_4.6.3-8 dash_0.5.7-3 debconf_1.5.45 debfoster_2.7-1.1 debhelper_9.20120608 debian-archive-keyring_2012.4 debianutils_4.3.2 diffutils_1:3.2-6 dpkg_1.16.7 dpkg-dev_1.16.7 e2fslibs_1.42.4-3 e2fsprogs_1.42.4-3 fakeroot_1.18.4-2 file_5.11-2 findutils_4.4.2-4 fontconfig_2.9.0-6 fontconfig-config_2.9.0-6 g++_4:4.6.3-7 g++-4.6_4.6.3-8 gcc_4:4.6.3-7 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-8 gcc-4.6-base_4.6.3-8 gcc-4.7-base_4.7.1-5 gettext_0.18.1.1-9 gettext-base_0.18.1.1-9 gfortran_4:4.6.3-7 gfortran-4.6_4.6.3-8 gnupg_1.4.12-4+b1 gpgv_1.4.12-4+b1 grep_2.12-2 groff-base_1.21-9 gzip_1.5-1.1 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-28 insserv_1.14.0-3 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-8 libapt-pkg4.12_0.9.7.1 libasprintf0c2_0.18.1.1-9 libattr1_1:2.4.46-8 libblas-dev_1.2.20110419-5 libblas3_1.2.20110419-5 libblkid1_2.20.1-5.1 libbz2-1.0_1.0.6-3 libbz2-dev_1.0.6-3 libc-bin_2.13-34 libc-dev-bin_2.13-34 libc6_2.13-34 libc6-dev_2.13-34 libcairo2_1.12.2-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.4-3 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-5 libdpkg-perl_1.16.7 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-2 libfontconfig1_2.9.0-6 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.1-5 libgdbm3_1.8.3-11 libgettextpo0_0.18.1.1-9 libgfortran3_4.7.1-5 libglib2.0-0_2.32.3-1 libgmp10_2:5.0.5+dfsg-2 libgomp1_4.7.1-5 libice6_2:1.0.8-2 libjbig0_2.0-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.4.1-5 liblapack3_3.4.1-5 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20120614-1 libmagic1_5.11-2 libmount1_2.20.1-5.1 libmpc2_0.9-4 libmpfr4_3.1.0-5 libncurses5_5.9-10 libncurses5-dev_5.9-10 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu2 libpaper1_1.1.24+nmu2 libpcre3_1:8.30-5 libpcre3-dev_1:8.30-5 libpcrecpp0_1:8.30-5 libpipeline1_1.2.1-1 libpixman-1-0_0.26.0-3 libpng12-0_1.2.49-2 libpng12-dev_1.2.49-2 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-5 libsemanage-common_2.1.6-6 libsemanage1_2.1.6-6 libsepol1_2.1.4-3 libslang2_2.2.4-15 libsm6_2:1.2.1-2 libss2_1.42.4-3 libstdc++6_4.7.1-5 libstdc++6-4.6-dev_4.6.3-8 libswitch-perl_2.16-2 libthai-data_0.1.18-1 libthai0_0.1.18-1 libtiff4_3.9.6-6 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-10 libtinfo5_5.9-10 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-23 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.1 libx11-6_2:1.5.0-1 libx11-data_2:1.5.0-1 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.1-1 libxext6_2:1.3.1-2 libxft2_2.3.1-1 libxml2_2.8.0+dfsg1-4 libxrender1_1:0.9.7-1 libxss1_1:1.2.2-1 libxt6_1:1.1.3-1 linux-libc-dev_3.2.21-2 login_1:4.1.5.1-1 lsb-base_4.1+Debian7 make_3.81-8.2 man-db_2.6.2-1 mawk_1.3.3-17 mount_2.20.1-5.1 multiarch-support_2.13-34 ncurses-base_5.9-10 ncurses-bin_5.9-10 passwd_1:4.1.5.1-1 patch_2.6.1-3 perl_5.14.2-12 perl-base_5.14.2-12 perl-modules_5.14.2-12 po-debconf_1.0.16+nmu2 r-base-core_2.15.1-4 r-base-dev_2.15.1-4 readline-common_6.2-8 sed_4.2.1-10 sensible-utils_0.0.7 sudo_1.8.5p2-1 sysv-rc_2.88dsf-28 sysvinit_2.88dsf-28 sysvinit-utils_2.88dsf-28 tar_1.26-4 tcl8.5_8.5.11-2 tk8.5_8.5.11-2 ttf-dejavu-core_2.33-2 tzdata_2012c-1 ucf_3.0025+nmu3 unzip_6.0-7 util-linux_2.20.1-5.1 x11-common_1:7.7+1 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20120614-1 zip_3.0-6 zlib1g_1:1.2.7.dfsg-13 zlib1g-dev_1:1.2.7.dfsg-13
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -597,12 +578,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -612,8 +593,8 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture armel
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -621,9 +602,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -652,26 +633,26 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build
+ debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `update-config'.
fakeroot debian/rules binary-arch
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
dh_testroot
@@ -684,44 +665,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.1-4)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -760,7 +741,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -785,72 +766,67 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_armel.deb'.
- dpkg-genchanges -B -marmel Build Daemon (antheil) <buildd_armel-antheil at buildd.debian.org> >../r-bioc-limma_3.10.3-1_armel.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_armel.deb'.
+ dpkg-genchanges -B -marmel Build Daemon (arnold) <buildd_armel-arnold at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_armel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0504
+Build finished at 20120720-1551
-r-bioc-limma_3.10.3-1_armel.changes:
+r-bioc-limma_3.12.0~dfsg-1_armel.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: armel
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: armel Build Daemon (antheil) <buildd_armel-antheil at buildd.debian.org>
+Maintainer: armel Build Daemon (arnold) <buildd_armel-arnold at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- e18ed17f3ffc257ad73bd046fe6839e026b68839 1475510 r-bioc-limma_3.10.3-1_armel.deb
+ f8765b6fc5457721ba449b92cfa339e213c79eb6 808674 r-bioc-limma_3.12.0~dfsg-1_armel.deb
Checksums-Sha256:
- 4a9a9b6f5865d03cd9e5031e441e5ec6a476ba694321e4830315b3548a8413db 1475510 r-bioc-limma_3.10.3-1_armel.deb
+ 7553769ca920039a1c17ac21555d082aad5389ed8e48ef50ed7596982070ea38 808674 r-bioc-limma_3.12.0~dfsg-1_armel.deb
Files:
- c1f24da2f95162f799a1bad9f23c1aa2 1475510 gnu-r optional r-bioc-limma_3.10.3-1_armel.deb
+ bf4bc3e325418b76f5e66bc1adcefd85 808674 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_armel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_armel.deb
-───────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_armel.deb
+────────────────────────────────────
new debian package, version 2.0.
- size 1475510 bytes: control archive= 1574 bytes.
- 769 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 808674 bytes: control archive= 1537 bytes.
+ 773 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: armel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1684
- Depends: libc6 (>= 2.4), r-base-core (>= 2.14.2-1)
+ Installed-Size: 988
+ Depends: libc6 (>= 2.4), r-base-core (>= 2.15.1-4)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -862,52 +838,51 @@ r-bioc-limma_3.10.3-1_armel.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 05:04 ./
-drwxr-xr-x root/root 0 2012-03-07 05:04 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 05:04 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 05:04 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 05:04 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 560 2012-03-07 05:02 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 2302 2012-03-07 05:02 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 264 2012-03-07 05:02 ./usr/share/doc/r-bioc-limma/README.Debian
-drwxr-xr-x root/root 0 2012-03-07 05:03 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 05:03 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 05:04 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 05:04 ./usr/lib/R/site-library/limma/
-drwxr-xr-x root/root 0 2012-03-07 05:03 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1350 2012-03-07 05:03 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 3275 2012-03-07 05:03 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6221 2012-03-07 05:03 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2392 2012-03-07 05:03 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 458368 2012-03-07 05:03 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 972 2012-03-07 05:03 ./usr/lib/R/site-library/limma/DESCRIPTION
--rw-r--r-- root/root 9458 2012-03-07 05:04 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 05:03 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 34556 2012-03-07 05:03 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2012-03-07 05:03 ./usr/lib/R/site-library/limma/html/R.css
-drwxr-xr-x root/root 0 2012-03-07 05:04 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 6022 2012-03-07 05:04 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 1057 2012-03-07 05:03 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 2886 2012-03-07 05:04 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 5603 2012-03-07 05:04 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 216 2012-03-07 05:04 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 518 2012-03-07 05:04 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 2173 2012-03-07 05:03 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 05:04 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 673 2012-03-07 05:03 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 737677 2012-03-07 05:03 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rwxr-xr-x root/root 89361 2012-03-07 05:03 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rwxr-xr-x root/root 1711 2012-03-07 05:03 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 42743 2012-03-07 05:03 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rwxr-xr-x root/root 1230 2012-03-07 05:03 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2012-03-07 05:03 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 383 2012-03-07 05:03 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 3773 2012-03-07 05:03 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 198253 2012-03-07 05:03 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 1901 2012-03-07 05:03 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2012-03-07 05:04 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 13840 2012-03-07 05:04 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/
+drwxr-xr-x root/root 0 2012-07-20 15:49 ./usr/lib/
+drwxr-xr-x root/root 0 2012-07-20 15:49 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/lib/R/site-library/limma/
+-rwxr-xr-x root/root 1230 2012-07-20 15:50 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 13840 2012-07-20 15:50 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 972 2012-07-20 15:49 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 1901 2012-07-20 15:49 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 2431 2012-07-20 15:50 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 3341 2012-07-20 15:50 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 472838 2012-07-20 15:50 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 1368 2012-07-20 15:50 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 6317 2012-07-20 15:50 ./usr/lib/R/site-library/limma/help/AnIndex
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 91993 2012-07-20 15:50 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rwxr-xr-x root/root 1711 2012-07-20 15:50 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 42743 2012-07-20 15:50 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 673 2012-07-20 15:50 ./usr/lib/R/site-library/limma/doc/index.html
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 383 2012-07-20 15:50 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 3824 2012-07-20 15:50 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 202286 2012-07-20 15:50 ./usr/lib/R/site-library/limma/R/limma.rdb
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 35015 2012-07-20 15:50 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2012-07-20 15:50 ./usr/lib/R/site-library/limma/html/R.css
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 220 2012-07-20 15:50 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 5729 2012-07-20 15:50 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 1061 2012-07-20 15:49 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 522 2012-07-20 15:50 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 6159 2012-07-20 15:50 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 2945 2012-07-20 15:50 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 3989 2012-07-20 15:50 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 9754 2012-07-20 15:50 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/share/
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-07-20 15:50 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 683 2012-07-20 15:48 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 264 2012-07-20 15:48 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 2457 2012-07-20 15:48 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 27996 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -921,7 +896,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-armel-sbuild-68554738-7175-4eea-a183-437c7cca274b/build/buildd-r-bioc-limma_3.10.3-1-armel-au2iZF
+Purging /var/lib/schroot/mount/sid-armel-sbuild-ec4f22f2-722e-4e0a-a440-7d1c8f943d5a/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armel-w418CV
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -929,19 +904,19 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: armel
-Build-Space: 5340
-Build-Time: 116
+Build-Space: 3276
+Build-Time: 133
Distribution: sid
-Install-Time: 307
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 284
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 555
-Source-Version: 3.10.3-1
-Space: 5340
+Package-Time: 547
+Source-Version: 3.12.0~dfsg-1
+Space: 3276
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0504
-Build needed 00:09:15, 5340k disc space
-Signature with key '6ED1FB5A' requested:
+Finished at 20120720-1551
+Build needed 00:09:07, 3276k disc space
+Signature with key '364BAAB7' requested:
diff --git a/armhf.log b/armhf.log
index 45d1625..f6bd334 100644
--- a/armhf.log
+++ b/armhf.log
@@ -1,69 +1,61 @@
-From buildd at hoiby.debian.org Wed Mar 07 06:12:39 2012
-Return-path: <buildd at hoiby.debian.org>
+From buildd at henze.debian.org Fri Jul 20 15:27:33 2012
+Return-path: <buildd at henze.debian.org>
Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=kokkonen.debian.org,
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at hoiby.debian.org>)
- id 1S5A75-0000bz-34
- for logs at buildd.debian.org; Wed, 07 Mar 2012 06:12:39 +0000
-Received: from [217.140.96.71] (helo=hoiby.debian.org)
+ (Exim 4.72) (envelope-from <buildd at henze.debian.org>)
+ id 1SsF77-00010D-3t
+ for logs at buildd.debian.org; Fri, 20 Jul 2012 15:27:33 +0000
+Received: from [217.140.96.70] (helo=henze.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=hoiby.debian.org, EMAIL=hostmaster at hoiby.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at hoiby.debian.org>)
- id 1S5A73-0002QH-M7
- for logs at buildd.debian.org; Wed, 07 Mar 2012 06:12:37 +0000
-Received: from buildd by hoiby.debian.org with local (Exim 4.77)
- (envelope-from <buildd at hoiby.debian.org>)
- id 1S5A6y-0003rb-Oi; Wed, 07 Mar 2012 06:12:32 +0000
-From: buildd on hoiby <buildd at hoiby.debian.org>
-To: logs at buildd.debian.org,buildd-porters at hoiby.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on armhf (dist=sid)
+ CN=henze.debian.org, EMAIL=hostmaster at henze.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
+ (Exim 4.72) (envelope-from <buildd at henze.debian.org>)
+ id 1SsF75-0001B9-V7
+ for logs at buildd.debian.org; Fri, 20 Jul 2012 15:27:32 +0000
+Received: from buildd by henze.debian.org with local (Exim 4.80)
+ (envelope-from <buildd at henze.debian.org>)
+ id 1SsF6y-0001er-9a; Fri, 20 Jul 2012 15:27:24 +0000
+From: buildd on henze <buildd at henze.debian.org>
+To: logs at buildd.debian.org,buildd-porters at henze.debian.org
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on armhf
+ (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
-Message-Id: <E1S5A6y-0003rb-Oi at hoiby.debian.org>
-Date: Wed, 07 Mar 2012 06:12:32 +0000
+Message-Id: <E1SsF6y-0001er-9a at henze.debian.org>
+Date: Fri, 20 Jul 2012 15:27:24 +0000
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on hoiby.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on henze.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (armhf) 07 Mar 2012 06:06 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (armhf) 20 Jul 2012 15:20 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: armhf
-Get:1 http://ftp.uk.debian.org unstable InRelease [197 kB]
-Get:2 http://incoming.debian.org unstable InRelease [197 kB]
-Get:3 http://ftp.uk.debian.org unstable/main Sources [6231 kB]
+Get:1 http://ftp.uk.debian.org unstable InRelease [249 kB]
+Get:2 http://incoming.debian.org unstable InRelease [249 kB]
+Get:3 http://ftp.uk.debian.org unstable/main Sources [6339 kB]
Ign http://incoming.debian.org InRelease
-Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [6231 kB]
-Get:6 http://ftp.uk.debian.org unstable/contrib Sources [55.0 kB]
-Get:7 http://ftp.uk.debian.org unstable/non-free Sources [98.8 kB]
-Get:8 http://ftp.uk.debian.org unstable/main armhf Packages [5628 kB]
-Get:9 http://incoming.debian.org unstable/contrib Sources [55.0 kB]
-Get:10 http://incoming.debian.org unstable/non-free Sources [98.8 kB]
-Get:11 http://incoming.debian.org unstable/main armhf Packages [5628 kB]
-Get:12 http://ftp.uk.debian.org unstable/contrib armhf Packages [35.7 kB]
-Ign http://ftp.uk.debian.org unstable/contrib TranslationIndex
-Get:13 http://ftp.uk.debian.org unstable/main TranslationIndex [2154 B]
-Get:14 http://ftp.uk.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:15 http://ftp.uk.debian.org unstable/main Translation-en [3906 kB]
-Get:16 http://incoming.debian.org unstable/contrib armhf Packages [35.7 kB]
-Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:17 http://incoming.debian.org unstable/main TranslationIndex [2154 B]
-Get:18 http://incoming.debian.org Release [1616 B]
-Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:20 http://incoming.debian.org unstable/main Translation-en [3906 kB]
-Get:21 http://incoming.debian.org Sources [61.6 kB]
-Get:22 http://incoming.debian.org Packages [883 kB]
-Ign http://incoming.debian.org Translation-en
-Fetched 33.3 MB in 1min 18s (426 kB/s)
+Get:4 http://incoming.debian.org unstable/main Sources [6339 kB]
+Get:5 http://ftp.uk.debian.org unstable/contrib Sources [54.8 kB]
+Get:6 http://ftp.uk.debian.org unstable/non-free Sources [97.9 kB]
+Get:7 http://ftp.uk.debian.org unstable/main armhf Packages [5945 kB]
+Get:8 http://ftp.uk.debian.org unstable/contrib armhf Packages [36.4 kB]
+Get:9 http://incoming.debian.org unstable/contrib Sources [54.8 kB]
+Get:10 http://incoming.debian.org unstable/non-free Sources [97.9 kB]
+Get:11 http://incoming.debian.org unstable/main armhf Packages [5945 kB]
+Get:12 http://incoming.debian.org unstable/contrib armhf Packages [36.4 kB]
+Get:13 http://incoming.debian.org Release.gpg [836 B]
+Get:14 http://incoming.debian.org Release [1601 B]
+Get:15 http://incoming.debian.org Sources [15.1 kB]
+Get:16 http://incoming.debian.org Packages [155 kB]
+Fetched 25.6 MB in 1min 27s (293 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,11 +76,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 1s (842 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 0s (842 kB/s)
Download complete and in download only mode
Check arch
@@ -102,18 +94,18 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.5+b1)
-fakeroot: already installed (1.18.2-1)
+fakeroot: already installed (1.18.4-2)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 11 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 11 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -122,400 +114,436 @@ Checking correctness of dependencies...
Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
Checking for already installed dependencies...
-libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.1+b1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+libc6-dev: already installed (2.13-34)
+gcc: already installed (4:4.6.3-7 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-7 >= 4:4.4.3 is satisfied)
+make: already installed (3.81-8.2)
+dpkg-dev: already installed (1.16.7 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120608
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.1-4
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
- libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
+ bsdmainutils file fontconfig fontconfig-config gcc-4.7-base gettext
+ gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian
+ libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgcc1
+ libgettextpo0 libgfortran3 libglib2.0-0 libgomp1 libice6 libjbig0 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
- po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common
- xdg-utils zip zlib1g-dev
+ libreadline6-dev libsm6 libstdc++6 libthai-data libthai0 libtiff4
+ libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
+ libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
+ libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core ucf unzip
+ x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make curl defoma gettext-doc
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc
gfortran-doc gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
ttf-arphic-bkai00mp less www-browser libmail-box-perl r-doc-info r-doc-pdf
r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
- texi2html tclreadline gvfs-bin
+ texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext
+ bsdmainutils cdbs debhelper file fontconfig fontconfig-config gettext
gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian
- libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi5 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
- libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
- po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip
- x11-common xdg-utils zip zlib1g-dev
-0 upgraded, 76 newly installed, 0 to remove and 11 not upgraded.
-Need to get 53.0 MB of archives.
-After this operation, 100 MB of additional disk space will be used.
-Get:1 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 armhf 1.2.1-1 [33.2 kB]
-Get:2 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armhf 5.10-1 [246 kB]
-Get:3 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 armhf 8.12-4+b1 [222 kB]
-Get:4 http://ftp.uk.debian.org/debian/ unstable/main libexpat1 armhf 2.0.1-7.2+b1 [106 kB]
-Get:5 http://ftp.uk.debian.org/debian/ unstable/main libfreetype6 armhf 2.4.8-1+b1 [371 kB]
-Get:6 http://ftp.uk.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
-Get:7 http://ftp.uk.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
-Get:8 http://ftp.uk.debian.org/debian/ unstable/main libfontconfig1 armhf 2.8.0-3.1 [264 kB]
-Get:9 http://ftp.uk.debian.org/debian/ unstable/main libpixman-1-0 armhf 0.24.4-1 [387 kB]
-Get:10 http://ftp.uk.debian.org/debian/ unstable/main libpng12-0 armhf 1.2.47-1 [176 kB]
-Get:11 http://ftp.uk.debian.org/debian/ unstable/main libxau6 armhf 1:1.0.6-4+b1 [15.9 kB]
-Get:12 http://ftp.uk.debian.org/debian/ unstable/main libxdmcp6 armhf 1:1.1.0-4+b1 [21.3 kB]
-Get:13 http://ftp.uk.debian.org/debian/ unstable/main libxcb1 armhf 1.8-2 [41.4 kB]
-Get:14 http://ftp.uk.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
-Get:15 http://ftp.uk.debian.org/debian/ unstable/main libx11-6 armhf 2:1.4.4-4+b1 [806 kB]
-Get:16 http://ftp.uk.debian.org/debian/ unstable/main libxcb-render0 armhf 1.8-2 [16.4 kB]
-Get:17 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shm0 armhf 1.8-2 [9730 B]
-Get:18 http://ftp.uk.debian.org/debian/ unstable/main libxrender1 armhf 1:0.9.6-2+b1 [27.6 kB]
-Get:19 http://ftp.uk.debian.org/debian/ unstable/main libcairo2 armhf 1.10.2-7 [882 kB]
-Get:20 http://ftp.uk.debian.org/debian/ unstable/main libffi5 armhf 3.0.10-3+b1 [22.3 kB]
-Get:21 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armhf 2.30.2-6 [1673 kB]
-Get:22 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armhf 2.7.8.dfsg-7 [779 kB]
-Get:23 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armhf 0.6.4-2 [134 kB]
-Get:24 http://ftp.uk.debian.org/debian/ unstable/main libdatrie1 armhf 0.2.5-3 [25.4 kB]
-Get:25 http://ftp.uk.debian.org/debian/ unstable/main libgfortran3 armhf 4.6.3-1 [222 kB]
-Get:26 http://ftp.uk.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
-Get:27 http://ftp.uk.debian.org/debian/ unstable/main libice6 armhf 2:1.0.7-2+b1 [47.6 kB]
-Get:28 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8 armhf 8d-1 [121 kB]
-Get:29 http://ftp.uk.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
-Get:30 http://ftp.uk.debian.org/debian/ unstable/main libthai0 armhf 0.1.17-1 [41.2 kB]
-Get:31 http://ftp.uk.debian.org/debian/ unstable/main libxft2 armhf 2.2.0-3+b1 [50.5 kB]
-Get:32 http://ftp.uk.debian.org/debian/ unstable/main fontconfig armhf 2.8.0-3.1 [333 kB]
-Get:33 http://ftp.uk.debian.org/debian/ unstable/main libpango1.0-0 armhf 1.29.4-2+b1 [396 kB]
-Get:34 http://ftp.uk.debian.org/debian/ unstable/main libpcrecpp0 armhf 8.12-4+b1 [110 kB]
-Get:35 http://ftp.uk.debian.org/debian/ unstable/main libsm6 armhf 2:1.2.0-2+b1 [27.3 kB]
-Get:36 http://ftp.uk.debian.org/debian/ unstable/main libtiff4 armhf 3.9.6-1 [178 kB]
-Get:37 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armhf 0.9.3-5+b1 [404 kB]
-Get:38 http://ftp.uk.debian.org/debian/ unstable/main libxext6 armhf 2:1.3.0-3+b1 [45.1 kB]
-Get:39 http://ftp.uk.debian.org/debian/ unstable/main libxss1 armhf 1:1.2.1-2 [15.6 kB]
-Get:40 http://ftp.uk.debian.org/debian/ unstable/main libxt6 armhf 1:1.1.1-2+b1 [167 kB]
-Get:41 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armhf 9.0.1 [203 kB]
-Get:42 http://ftp.uk.debian.org/debian/ unstable/main groff-base armhf 1.21-6+b1 [1027 kB]
-Get:43 http://ftp.uk.debian.org/debian/ unstable/main man-db armhf 2.6.1-1 [1009 kB]
-Get:44 http://ftp.uk.debian.org/debian/ unstable/main file armhf 5.10-1 [52.4 kB]
-Get:45 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armhf 0.18.1.1-5+b1 [132 kB]
-Get:46 http://ftp.uk.debian.org/debian/ unstable/main cdbs all 0.4.105 [78.7 kB]
-Get:47 http://ftp.uk.debian.org/debian/ unstable/main html2text armhf 1.3.2a-15+b1 [94.6 kB]
-Get:48 http://ftp.uk.debian.org/debian/ unstable/main gettext armhf 0.18.1.1-5+b1 [1920 kB]
-Get:49 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:50 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:51 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20120115 [693 kB]
-Get:52 http://ftp.uk.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
-Get:53 http://ftp.uk.debian.org/debian/ unstable/main gfortran-4.6 armhf 4.6.3-1 [4606 kB]
-Get:54 http://ftp.uk.debian.org/debian/ unstable/main gfortran armhf 4:4.6.2-4 [1122 B]
-Get:55 http://ftp.uk.debian.org/debian/ unstable/main libblas3gf armhf 1.2.20110419-2+b1 [190 kB]
-Get:56 http://ftp.uk.debian.org/debian/ unstable/main libblas-dev armhf 1.2.20110419-2+b1 [193 kB]
-Get:57 http://ftp.uk.debian.org/debian/ unstable/main libbz2-dev armhf 1.0.6-1 [31.8 kB]
-Get:58 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8-dev armhf 8d-1 [226 kB]
-Get:59 http://ftp.uk.debian.org/debian/ unstable/main liblapack3gf armhf 3.3.1-1 [3279 kB]
-Get:60 http://ftp.uk.debian.org/debian/ unstable/main liblapack-dev armhf 3.3.1-1 [3531 kB]
-Get:61 http://ftp.uk.debian.org/debian/ unstable/main libtinfo-dev armhf 5.9-4+b1 [84.0 kB]
-Get:62 http://ftp.uk.debian.org/debian/ unstable/main libncurses5-dev armhf 5.9-4+b1 [374 kB]
-Get:63 http://ftp.uk.debian.org/debian/ unstable/main libpaper1 armhf 1.1.24+nmu1+b1 [20.7 kB]
-Get:64 http://ftp.uk.debian.org/debian/ unstable/main libpaper-utils armhf 1.1.24+nmu1+b1 [17.8 kB]
-Get:65 http://ftp.uk.debian.org/debian/ unstable/main libpcre3-dev armhf 8.12-4+b1 [299 kB]
-Get:66 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armhf 1:1.2.6.dfsg-2 [206 kB]
-Get:67 http://ftp.uk.debian.org/debian/ unstable/main libpng12-dev armhf 1.2.47-1 [256 kB]
-Get:68 http://ftp.uk.debian.org/debian/ unstable/main libreadline6-dev armhf 6.2-8+b1 [229 kB]
-Get:69 http://ftp.uk.debian.org/debian/ unstable/main libreadline-dev armhf 6.2-8+b1 [898 B]
-Get:70 http://ftp.uk.debian.org/debian/ unstable/main zip armhf 3.0-4+b1 [316 kB]
-Get:71 http://ftp.uk.debian.org/debian/ unstable/main unzip armhf 6.0-5+b1 [182 kB]
-Get:72 http://ftp.uk.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
-Get:73 http://ftp.uk.debian.org/debian/ unstable/main tcl8.5 armhf 8.5.11-1 [1532 kB]
-Get:74 http://ftp.uk.debian.org/debian/ unstable/main tk8.5 armhf 8.5.11-1 [1074 kB]
-Get:75 http://ftp.uk.debian.org/debian/ unstable/main r-base-core armhf 2.14.2-1 [19.9 MB]
-Get:76 http://ftp.uk.debian.org/debian/ unstable/main r-base-dev all 2.14.2-1 [3894 B]
+ libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgettextpo0
+ libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango1.0-0
+ libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
+ libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
+ libsm6 libthai-data libthai0 libtiff4 libtinfo-dev libunistring0 libx11-6
+ libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
+ libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
+ r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
+ zlib1g-dev
+The following packages will be upgraded:
+ gcc-4.7-base libgcc1 libgomp1 libstdc++6
+4 upgraded, 79 newly installed, 0 to remove and 6 not upgraded.
+Need to get 54.4 MB of archives.
+After this operation, 102 MB of additional disk space will be used.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main libgomp1 armhf 4.7.1-5 [25.7 kB]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.7-base armhf 4.7.1-5 [141 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main libstdc++6 armhf 4.7.1-5 [279 kB]
+Get:4 http://ftp.uk.debian.org/debian/ unstable/main libgcc1 armhf 1:4.7.1-5 [52.5 kB]
+Get:5 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 armhf 1.2.1-1 [33.2 kB]
+Get:6 http://ftp.uk.debian.org/debian/ unstable/main libasprintf0c2 armhf 0.18.1.1-9 [26.4 kB]
+Get:7 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armhf 5.11-2 [199 kB]
+Get:8 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 armhf 1:8.30-5 [240 kB]
+Get:9 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armhf 2.8.0+dfsg1-4 [786 kB]
+Get:10 http://ftp.uk.debian.org/debian/ unstable/main libexpat1 armhf 2.1.0-1 [109 kB]
+Get:11 http://ftp.uk.debian.org/debian/ unstable/main libfreetype6 armhf 2.4.9-1 [380 kB]
+Get:12 http://ftp.uk.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
+Get:13 http://ftp.uk.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:14 http://ftp.uk.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-6 [232 kB]
+Get:15 http://ftp.uk.debian.org/debian/ unstable/main libfontconfig1 armhf 2.9.0-6 [280 kB]
+Get:16 http://ftp.uk.debian.org/debian/ unstable/main libpixman-1-0 armhf 0.26.0-3 [405 kB]
+Get:17 http://ftp.uk.debian.org/debian/ unstable/main libpng12-0 armhf 1.2.49-2 [176 kB]
+Get:18 http://ftp.uk.debian.org/debian/ unstable/main libxau6 armhf 1:1.0.7-1 [17.3 kB]
+Get:19 http://ftp.uk.debian.org/debian/ unstable/main libxdmcp6 armhf 1:1.1.1-1 [25.0 kB]
+Get:20 http://ftp.uk.debian.org/debian/ unstable/main libxcb1 armhf 1.8.1-1 [41.4 kB]
+Get:21 http://ftp.uk.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
+Get:22 http://ftp.uk.debian.org/debian/ unstable/main libx11-6 armhf 2:1.5.0-1 [815 kB]
+Get:23 http://ftp.uk.debian.org/debian/ unstable/main libxcb-render0 armhf 1.8.1-1 [16.0 kB]
+Get:24 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shm0 armhf 1.8.1-1 [9642 B]
+Get:25 http://ftp.uk.debian.org/debian/ unstable/main libxrender1 armhf 1:0.9.7-1 [28.1 kB]
+Get:26 http://ftp.uk.debian.org/debian/ unstable/main libcairo2 armhf 1.12.2-2 [816 kB]
+Get:27 http://ftp.uk.debian.org/debian/ unstable/main libffi5 armhf 3.0.10-3+b1 [22.3 kB]
+Get:28 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armhf 2.32.3-1 [1896 kB]
+Get:29 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armhf 0.6.5-1 [134 kB]
+Get:30 http://ftp.uk.debian.org/debian/ unstable/main libdatrie1 armhf 0.2.5-3 [25.4 kB]
+Get:31 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armhf 0.9.3-5+b1 [404 kB]
+Get:32 http://ftp.uk.debian.org/debian/ unstable/main libgettextpo0 armhf 0.18.1.1-9 [122 kB]
+Get:33 http://ftp.uk.debian.org/debian/ unstable/main libgfortran3 armhf 4.7.1-5 [216 kB]
+Get:34 http://ftp.uk.debian.org/debian/ unstable/main x11-common all 1:7.7+1 [278 kB]
+Get:35 http://ftp.uk.debian.org/debian/ unstable/main libice6 armhf 2:1.0.8-2 [53.4 kB]
+Get:36 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8 armhf 8d-1 [121 kB]
+Get:37 http://ftp.uk.debian.org/debian/ unstable/main libthai-data all 0.1.18-1 [205 kB]
+Get:38 http://ftp.uk.debian.org/debian/ unstable/main libthai0 armhf 0.1.18-1 [41.5 kB]
+Get:39 http://ftp.uk.debian.org/debian/ unstable/main libxft2 armhf 2.3.1-1 [53.3 kB]
+Get:40 http://ftp.uk.debian.org/debian/ unstable/main fontconfig armhf 2.9.0-6 [349 kB]
+Get:41 http://ftp.uk.debian.org/debian/ unstable/main libpango1.0-0 armhf 1.30.0-1 [398 kB]
+Get:42 http://ftp.uk.debian.org/debian/ unstable/main libpaper1 armhf 1.1.24+nmu2 [20.8 kB]
+Get:43 http://ftp.uk.debian.org/debian/ unstable/main libpcrecpp0 armhf 1:8.30-5 [122 kB]
+Get:44 http://ftp.uk.debian.org/debian/ unstable/main libsm6 armhf 2:1.2.1-2 [31.2 kB]
+Get:45 http://ftp.uk.debian.org/debian/ unstable/main libjbig0 armhf 2.0-2 [29.2 kB]
+Get:46 http://ftp.uk.debian.org/debian/ unstable/main libtiff4 armhf 3.9.6-6 [178 kB]
+Get:47 http://ftp.uk.debian.org/debian/ unstable/main libxext6 armhf 2:1.3.1-2 [47.6 kB]
+Get:48 http://ftp.uk.debian.org/debian/ unstable/main libxss1 armhf 1:1.2.2-1 [16.3 kB]
+Get:49 http://ftp.uk.debian.org/debian/ unstable/main libxt6 armhf 1:1.1.3-1 [170 kB]
+Get:50 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armhf 9.0.3 [204 kB]
+Get:51 http://ftp.uk.debian.org/debian/ unstable/main groff-base armhf 1.21-9 [1031 kB]
+Get:52 http://ftp.uk.debian.org/debian/ unstable/main man-db armhf 2.6.2-1 [1014 kB]
+Get:53 http://ftp.uk.debian.org/debian/ unstable/main file armhf 5.11-2 [51.5 kB]
+Get:54 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armhf 0.18.1.1-9 [130 kB]
+Get:55 http://ftp.uk.debian.org/debian/ unstable/main cdbs all 0.4.116 [79.9 kB]
+Get:56 http://ftp.uk.debian.org/debian/ unstable/main html2text armhf 1.3.2a-15+b1 [94.6 kB]
+Get:57 http://ftp.uk.debian.org/debian/ unstable/main gettext armhf 0.18.1.1-9 [1828 kB]
+Get:58 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:59 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:60 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20120608 [700 kB]
+Get:61 http://ftp.uk.debian.org/debian/ unstable/main gfortran-4.6 armhf 4.6.3-8 [4603 kB]
+Get:62 http://ftp.uk.debian.org/debian/ unstable/main gfortran armhf 4:4.6.3-7 [1124 B]
+Get:63 http://ftp.uk.debian.org/debian/ unstable/main libblas3 armhf 1.2.20110419-5 [191 kB]
+Get:64 http://ftp.uk.debian.org/debian/ unstable/main libblas-dev armhf 1.2.20110419-5 [195 kB]
+Get:65 http://ftp.uk.debian.org/debian/ unstable/main libbz2-dev armhf 1.0.6-3 [32.7 kB]
+Get:66 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8-dev armhf 8d-1 [226 kB]
+Get:67 http://ftp.uk.debian.org/debian/ unstable/main liblapack3 armhf 3.4.1-5 [3350 kB]
+Get:68 http://ftp.uk.debian.org/debian/ unstable/main liblapack-dev armhf 3.4.1-5 [3624 kB]
+Get:69 http://ftp.uk.debian.org/debian/ unstable/main libtinfo-dev armhf 5.9-10 [83.9 kB]
+Get:70 http://ftp.uk.debian.org/debian/ unstable/main libncurses5-dev armhf 5.9-10 [194 kB]
+Get:71 http://ftp.uk.debian.org/debian/ unstable/main libpaper-utils armhf 1.1.24+nmu2 [17.8 kB]
+Get:72 http://ftp.uk.debian.org/debian/ unstable/main libpcre3-dev armhf 1:8.30-5 [342 kB]
+Get:73 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armhf 1:1.2.7.dfsg-13 [209 kB]
+Get:74 http://ftp.uk.debian.org/debian/ unstable/main libpng12-dev armhf 1.2.49-2 [256 kB]
+Get:75 http://ftp.uk.debian.org/debian/ unstable/main libreadline6-dev armhf 6.2-8+b1 [229 kB]
+Get:76 http://ftp.uk.debian.org/debian/ unstable/main libreadline-dev armhf 6.2-8+b1 [898 B]
+Get:77 http://ftp.uk.debian.org/debian/ unstable/main zip armhf 3.0-6 [319 kB]
+Get:78 http://ftp.uk.debian.org/debian/ unstable/main unzip armhf 6.0-7 [186 kB]
+Get:79 http://ftp.uk.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:80 http://ftp.uk.debian.org/debian/ unstable/main tcl8.5 armhf 8.5.11-2 [1538 kB]
+Get:81 http://ftp.uk.debian.org/debian/ unstable/main tk8.5 armhf 8.5.11-2 [1084 kB]
+Get:82 http://ftp.uk.debian.org/debian/ unstable/main r-base-core armhf 2.15.1-4 [20.4 MB]
+Get:83 http://ftp.uk.debian.org/debian/ unstable/main r-base-dev all 2.15.1-4 [3882 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 53.0 MB in 9s (5375 kB/s)
-Selecting previously unselected package libpipeline1.
-(Reading database ... 10762 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_armhf.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_armhf.deb) ...
-Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-4+b1_armhf.deb) ...
-Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2+b1_armhf.deb) ...
-Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1+b1_armhf.deb) ...
+Fetched 54.4 MB in 24s (2182 kB/s)
+(Reading database ... 10766 files and directories currently installed.)
+Preparing to replace libgomp1:armhf 4.7.1-3 (using .../libgomp1_4.7.1-5_armhf.deb) ...
+Unpacking replacement libgomp1:armhf ...
+Preparing to replace gcc-4.7-base:armhf 4.7.1-3 (using .../gcc-4.7-base_4.7.1-5_armhf.deb) ...
+Unpacking replacement gcc-4.7-base:armhf ...
+Setting up gcc-4.7-base:armhf (4.7.1-5) ...
+(Reading database ... 10766 files and directories currently installed.)
+Preparing to replace libstdc++6:armhf 4.7.1-3 (using .../libstdc++6_4.7.1-5_armhf.deb) ...
+Unpacking replacement libstdc++6:armhf ...
+Setting up libstdc++6:armhf (4.7.1-5) ...
+(Reading database ... 10766 files and directories currently installed.)
+Preparing to replace libgcc1:armhf 1:4.7.1-3 (using .../libgcc1_1%3a4.7.1-5_armhf.deb) ...
+Unpacking replacement libgcc1:armhf ...
+Setting up libgcc1:armhf (1:4.7.1-5) ...
+Selecting previously unselected package libpipeline1:armhf.
+(Reading database ... 10766 files and directories currently installed.)
+Unpacking libpipeline1:armhf (from .../libpipeline1_1.2.1-1_armhf.deb) ...
+Selecting previously unselected package libasprintf0c2:armhf.
+Unpacking libasprintf0c2:armhf (from .../libasprintf0c2_0.18.1.1-9_armhf.deb) ...
+Selecting previously unselected package libmagic1:armhf.
+Unpacking libmagic1:armhf (from .../libmagic1_5.11-2_armhf.deb) ...
+Selecting previously unselected package libpcre3:armhf.
+Unpacking libpcre3:armhf (from .../libpcre3_1%3a8.30-5_armhf.deb) ...
+Selecting previously unselected package libxml2:armhf.
+Unpacking libxml2:armhf (from .../libxml2_2.8.0+dfsg1-4_armhf.deb) ...
+Selecting previously unselected package libexpat1:armhf.
+Unpacking libexpat1:armhf (from .../libexpat1_2.1.0-1_armhf.deb) ...
+Selecting previously unselected package libfreetype6:armhf.
+Unpacking libfreetype6:armhf (from .../libfreetype6_2.4.9-1_armhf.deb) ...
+Selecting previously unselected package ucf.
+Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Moving old data out of the way
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3.1_all.deb) ...
-Selecting previously unselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_armhf.deb) ...
-Selecting previously unselected package libpixman-1-0.
-Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_armhf.deb) ...
-Selecting previously unselected package libpng12-0.
-Unpacking libpng12-0 (from .../libpng12-0_1.2.47-1_armhf.deb) ...
-Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4+b1_armhf.deb) ...
-Selecting previously unselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4+b1_armhf.deb) ...
-Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_armhf.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-6_all.deb) ...
+Selecting previously unselected package libfontconfig1:armhf.
+Unpacking libfontconfig1:armhf (from .../libfontconfig1_2.9.0-6_armhf.deb) ...
+Selecting previously unselected package libpixman-1-0:armhf.
+Unpacking libpixman-1-0:armhf (from .../libpixman-1-0_0.26.0-3_armhf.deb) ...
+Selecting previously unselected package libpng12-0:armhf.
+Unpacking libpng12-0:armhf (from .../libpng12-0_1.2.49-2_armhf.deb) ...
+Selecting previously unselected package libxau6:armhf.
+Unpacking libxau6:armhf (from .../libxau6_1%3a1.0.7-1_armhf.deb) ...
+Selecting previously unselected package libxdmcp6:armhf.
+Unpacking libxdmcp6:armhf (from .../libxdmcp6_1%3a1.1.1-1_armhf.deb) ...
+Selecting previously unselected package libxcb1:armhf.
+Unpacking libxcb1:armhf (from .../libxcb1_1.8.1-1_armhf.deb) ...
Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
-Selecting previously unselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4+b1_armhf.deb) ...
-Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_armhf.deb) ...
-Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_armhf.deb) ...
-Selecting previously unselected package libxrender1.
-Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2+b1_armhf.deb) ...
-Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_armhf.deb) ...
-Selecting previously unselected package libffi5.
-Unpacking libffi5 (from .../libffi5_3.0.10-3+b1_armhf.deb) ...
-Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_armhf.deb) ...
-Selecting previously unselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_armhf.deb) ...
-Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_armhf.deb) ...
-Selecting previously unselected package libdatrie1.
-Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_armhf.deb) ...
-Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_armhf.deb) ...
+Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:armhf.
+Unpacking libx11-6:armhf (from .../libx11-6_2%3a1.5.0-1_armhf.deb) ...
+Selecting previously unselected package libxcb-render0:armhf.
+Unpacking libxcb-render0:armhf (from .../libxcb-render0_1.8.1-1_armhf.deb) ...
+Selecting previously unselected package libxcb-shm0:armhf.
+Unpacking libxcb-shm0:armhf (from .../libxcb-shm0_1.8.1-1_armhf.deb) ...
+Selecting previously unselected package libxrender1:armhf.
+Unpacking libxrender1:armhf (from .../libxrender1_1%3a0.9.7-1_armhf.deb) ...
+Selecting previously unselected package libcairo2:armhf.
+Unpacking libcairo2:armhf (from .../libcairo2_1.12.2-2_armhf.deb) ...
+Selecting previously unselected package libffi5:armhf.
+Unpacking libffi5:armhf (from .../libffi5_3.0.10-3+b1_armhf.deb) ...
+Selecting previously unselected package libglib2.0-0:armhf.
+Unpacking libglib2.0-0:armhf (from .../libglib2.0-0_2.32.3-1_armhf.deb) ...
+Selecting previously unselected package libcroco3:armhf.
+Unpacking libcroco3:armhf (from .../libcroco3_0.6.5-1_armhf.deb) ...
+Selecting previously unselected package libdatrie1:armhf.
+Unpacking libdatrie1:armhf (from .../libdatrie1_0.2.5-3_armhf.deb) ...
+Selecting previously unselected package libunistring0:armhf.
+Unpacking libunistring0:armhf (from .../libunistring0_0.9.3-5+b1_armhf.deb) ...
+Selecting previously unselected package libgettextpo0:armhf.
+Unpacking libgettextpo0:armhf (from .../libgettextpo0_0.18.1.1-9_armhf.deb) ...
+Selecting previously unselected package libgfortran3:armhf.
+Unpacking libgfortran3:armhf (from .../libgfortran3_4.7.1-5_armhf.deb) ...
Selecting previously unselected package x11-common.
-Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
-Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2+b1_armhf.deb) ...
-Selecting previously unselected package libjpeg8.
-Unpacking libjpeg8 (from .../libjpeg8_8d-1_armhf.deb) ...
+Unpacking x11-common (from .../x11-common_1%3a7.7+1_all.deb) ...
+Selecting previously unselected package libice6:armhf.
+Unpacking libice6:armhf (from .../libice6_2%3a1.0.8-2_armhf.deb) ...
+Selecting previously unselected package libjpeg8:armhf.
+Unpacking libjpeg8:armhf (from .../libjpeg8_8d-1_armhf.deb) ...
Selecting previously unselected package libthai-data.
-Unpacking libthai-data (from .../libthai-data_0.1.17-1_all.deb) ...
-Selecting previously unselected package libthai0.
-Unpacking libthai0 (from .../libthai0_0.1.17-1_armhf.deb) ...
-Selecting previously unselected package libxft2.
-Unpacking libxft2 (from .../libxft2_2.2.0-3+b1_armhf.deb) ...
+Unpacking libthai-data (from .../libthai-data_0.1.18-1_all.deb) ...
+Selecting previously unselected package libthai0:armhf.
+Unpacking libthai0:armhf (from .../libthai0_0.1.18-1_armhf.deb) ...
+Selecting previously unselected package libxft2:armhf.
+Unpacking libxft2:armhf (from .../libxft2_2.3.1-1_armhf.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_armhf.deb) ...
-Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2+b1_armhf.deb) ...
-Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4+b1_armhf.deb) ...
-Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2+b1_armhf.deb) ...
-Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_armhf.deb) ...
-Selecting previously unselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-5+b1_armhf.deb) ...
-Selecting previously unselected package libxext6.
-Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3+b1_armhf.deb) ...
-Selecting previously unselected package libxss1.
-Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_armhf.deb) ...
-Selecting previously unselected package libxt6.
-Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2+b1_armhf.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.9.0-6_armhf.deb) ...
+Selecting previously unselected package libpango1.0-0:armhf.
+Unpacking libpango1.0-0:armhf (from .../libpango1.0-0_1.30.0-1_armhf.deb) ...
+Selecting previously unselected package libpaper1:armhf.
+Unpacking libpaper1:armhf (from .../libpaper1_1.1.24+nmu2_armhf.deb) ...
+Selecting previously unselected package libpcrecpp0:armhf.
+Unpacking libpcrecpp0:armhf (from .../libpcrecpp0_1%3a8.30-5_armhf.deb) ...
+Selecting previously unselected package libsm6:armhf.
+Unpacking libsm6:armhf (from .../libsm6_2%3a1.2.1-2_armhf.deb) ...
+Selecting previously unselected package libjbig0:armhf.
+Unpacking libjbig0:armhf (from .../libjbig0_2.0-2_armhf.deb) ...
+Selecting previously unselected package libtiff4:armhf.
+Unpacking libtiff4:armhf (from .../libtiff4_3.9.6-6_armhf.deb) ...
+Selecting previously unselected package libxext6:armhf.
+Unpacking libxext6:armhf (from .../libxext6_2%3a1.3.1-2_armhf.deb) ...
+Selecting previously unselected package libxss1:armhf.
+Unpacking libxss1:armhf (from .../libxss1_1%3a1.2.2-1_armhf.deb) ...
+Selecting previously unselected package libxt6:armhf.
+Unpacking libxt6:armhf (from .../libxt6_1%3a1.1.3-1_armhf.deb) ...
Selecting previously unselected package bsdmainutils.
-Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_armhf.deb) ...
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.3_armhf.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6+b1_armhf.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-9_armhf.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_armhf.deb) ...
+Unpacking man-db (from .../man-db_2.6.2-1_armhf.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.10-1_armhf.deb) ...
+Unpacking file (from .../archives/file_5.11-2_armhf.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-5+b1_armhf.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.1.1-9_armhf.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.116_all.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15+b1_armhf.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-5+b1_armhf.deb) ...
+Unpacking gettext (from .../gettext_0.18.1.1-9_armhf.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
-Selecting previously unselected package dpatch.
-Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120608_all.deb) ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_armhf.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-8_armhf.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_armhf.deb) ...
-Selecting previously unselected package libblas3gf.
-Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2+b1_armhf.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-7_armhf.deb) ...
+Selecting previously unselected package libblas3.
+Unpacking libblas3 (from .../libblas3_1.2.20110419-5_armhf.deb) ...
Selecting previously unselected package libblas-dev.
-Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-2+b1_armhf.deb) ...
-Selecting previously unselected package libbz2-dev.
-Unpacking libbz2-dev (from .../libbz2-dev_1.0.6-1_armhf.deb) ...
-Selecting previously unselected package libjpeg8-dev.
-Unpacking libjpeg8-dev (from .../libjpeg8-dev_8d-1_armhf.deb) ...
-Selecting previously unselected package liblapack3gf.
-Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_armhf.deb) ...
+Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-5_armhf.deb) ...
+Selecting previously unselected package libbz2-dev:armhf.
+Unpacking libbz2-dev:armhf (from .../libbz2-dev_1.0.6-3_armhf.deb) ...
+Selecting previously unselected package libjpeg8-dev:armhf.
+Unpacking libjpeg8-dev:armhf (from .../libjpeg8-dev_8d-1_armhf.deb) ...
+Selecting previously unselected package liblapack3.
+Unpacking liblapack3 (from .../liblapack3_3.4.1-5_armhf.deb) ...
Selecting previously unselected package liblapack-dev.
-Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_armhf.deb) ...
-Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4+b1_armhf.deb) ...
+Unpacking liblapack-dev (from .../liblapack-dev_3.4.1-5_armhf.deb) ...
+Selecting previously unselected package libtinfo-dev:armhf.
+Unpacking libtinfo-dev:armhf (from .../libtinfo-dev_5.9-10_armhf.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4+b1_armhf.deb) ...
-Selecting previously unselected package libpaper1.
-Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1+b1_armhf.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-10_armhf.deb) ...
Selecting previously unselected package libpaper-utils.
-Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1+b1_armhf.deb) ...
+Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_armhf.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4+b1_armhf.deb) ...
-Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_armhf.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-5_armhf.deb) ...
+Selecting previously unselected package zlib1g-dev:armhf.
+Unpacking zlib1g-dev:armhf (from .../zlib1g-dev_1%3a1.2.7.dfsg-13_armhf.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_armhf.deb) ...
-Selecting previously unselected package libreadline6-dev.
-Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8+b1_armhf.deb) ...
-Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8+b1_armhf.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-2_armhf.deb) ...
+Selecting previously unselected package libreadline6-dev:armhf.
+Unpacking libreadline6-dev:armhf (from .../libreadline6-dev_6.2-8+b1_armhf.deb) ...
+Selecting previously unselected package libreadline-dev:armhf.
+Unpacking libreadline-dev:armhf (from .../libreadline-dev_6.2-8+b1_armhf.deb) ...
Selecting previously unselected package zip.
-Unpacking zip (from .../zip_3.0-4+b1_armhf.deb) ...
+Unpacking zip (from .../archives/zip_3.0-6_armhf.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../unzip_6.0-5+b1_armhf.deb) ...
+Unpacking unzip (from .../archives/unzip_6.0-7_armhf.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_armhf.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_armhf.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-1_armhf.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.11-2_armhf.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_armhf.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.1-4_armhf.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libpcre3 (8.12-4+b1) ...
-Setting up libexpat1 (2.0.1-7.2+b1) ...
-Setting up libfreetype6 (2.4.8-1+b1) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.1-4_all.deb) ...
+Setting up libgomp1:armhf (4.7.1-5) ...
+Setting up libpipeline1:armhf (1.2.1-1) ...
+Setting up libasprintf0c2:armhf (0.18.1.1-9) ...
+Setting up libmagic1:armhf (5.11-2) ...
+Setting up libpcre3:armhf (1:8.30-5) ...
+Setting up libxml2:armhf (2.8.0+dfsg1-4) ...
+Setting up libexpat1:armhf (2.1.0-1) ...
+Setting up libfreetype6:armhf (2.4.9-1) ...
+Setting up ucf (3.0025+nmu3) ...
Setting up ttf-dejavu-core (2.33-2) ...
-Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libpng12-0 (1.2.47-1) ...
-Setting up libxau6 (1:1.0.6-4+b1) ...
-Setting up libxdmcp6 (1:1.1.0-4+b1) ...
-Setting up libxcb1 (1.8-2) ...
-Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4+b1) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
-Setting up libxrender1 (1:0.9.6-2+b1) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3+b1) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up fontconfig-config (2.9.0-6) ...
+Setting up libfontconfig1:armhf (2.9.0-6) ...
+Setting up libpixman-1-0:armhf (0.26.0-3) ...
+Setting up libpng12-0:armhf (1.2.49-2) ...
+Setting up libxau6:armhf (1:1.0.7-1) ...
+Setting up libxdmcp6:armhf (1:1.1.1-1) ...
+Setting up libxcb1:armhf (1.8.1-1) ...
+Setting up libx11-data (2:1.5.0-1) ...
+Setting up libx11-6:armhf (2:1.5.0-1) ...
+Setting up libxcb-render0:armhf (1.8.1-1) ...
+Setting up libxcb-shm0:armhf (1.8.1-1) ...
+Setting up libxrender1:armhf (1:0.9.7-1) ...
+Setting up libcairo2:armhf (1.12.2-2) ...
+Setting up libffi5:armhf (3.0.10-3+b1) ...
+Setting up libglib2.0-0:armhf (2.32.3-1) ...
No schema files found: doing nothing.
-Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
-Setting up x11-common (1:7.6+12) ...
+Setting up libcroco3:armhf (0.6.5-1) ...
+Setting up libdatrie1:armhf (0.2.5-3) ...
+Setting up libunistring0:armhf (0.9.3-5+b1) ...
+Setting up libgettextpo0:armhf (0.18.1.1-9) ...
+Setting up libgfortran3:armhf (4.7.1-5) ...
+Setting up x11-common (1:7.7+1) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2+b1) ...
-Setting up libjpeg8 (8d-1) ...
-Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3+b1) ...
-Setting up fontconfig (2.8.0-3.1) ...
+Setting up libice6:armhf (2:1.0.8-2) ...
+Setting up libjpeg8:armhf (8d-1) ...
+Setting up libthai-data (0.1.18-1) ...
+Setting up libthai0:armhf (0.1.18-1) ...
+Setting up libxft2:armhf (2.3.1-1) ...
+Setting up fontconfig (2.9.0-6) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2+b1) ...
-Setting up libpcrecpp0 (8.12-4+b1) ...
-Setting up libsm6 (2:1.2.0-2+b1) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5+b1) ...
-Setting up libxext6 (2:1.3.0-3+b1) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2+b1) ...
-Setting up bsdmainutils (9.0.1) ...
-update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
-update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6+b1) ...
-Setting up man-db (2.6.1-1) ...
+Setting up libpango1.0-0:armhf (1.30.0-1) ...
+Setting up libpaper1:armhf (1.1.24+nmu2) ...
+
+Creating config file /etc/papersize with new version
+Setting up libpcrecpp0:armhf (1:8.30-5) ...
+Setting up libsm6:armhf (2:1.2.1-2) ...
+Setting up libjbig0:armhf (2.0-2) ...
+Setting up libtiff4:armhf (3.9.6-6) ...
+Setting up libxext6:armhf (2:1.3.1-2) ...
+Setting up libxss1:armhf (1:1.2.2-1) ...
+Setting up libxt6:armhf (1:1.1.3-1) ...
+Setting up bsdmainutils (9.0.3) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
+Setting up groff-base (1.21-9) ...
+Setting up man-db (2.6.2-1) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
-Setting up gettext-base (0.18.1.1-5+b1) ...
-Setting up cdbs (0.4.105) ...
+Setting up file (5.11-2) ...
+Setting up gettext-base (0.18.1.1-9) ...
+Setting up cdbs (0.4.116) ...
Setting up html2text (1.3.2a-15+b1) ...
-Setting up gettext (0.18.1.1-5+b1) ...
+Setting up gettext (0.18.1.1-9) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
-Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
-update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
-Setting up libblas3gf (1.2.20110419-2+b1) ...
-update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
-Setting up libblas-dev (1.2.20110419-2+b1) ...
-update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
-Setting up liblapack3gf (3.3.1-1) ...
-update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
-Setting up liblapack-dev (3.3.1-1) ...
-update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4+b1) ...
-Setting up libncurses5-dev (5.9-4+b1) ...
-Setting up libpaper1 (1.1.24+nmu1+b1) ...
-
-Creating config file /etc/papersize with new version
-Setting up libpaper-utils (1.1.24+nmu1+b1) ...
-Setting up libpcre3-dev (8.12-4+b1) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8+b1) ...
-Setting up libreadline-dev (6.2-8+b1) ...
-Setting up zip (3.0-4+b1) ...
-Setting up unzip (6.0-5+b1) ...
+Setting up debhelper (9.20120608) ...
+Setting up gfortran-4.6 (4.6.3-8) ...
+Setting up gfortran (4:4.6.3-7) ...
+update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
+Setting up libblas3 (1.2.20110419-5) ...
+update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
+Setting up libblas-dev (1.2.20110419-5) ...
+update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
+Setting up libbz2-dev:armhf (1.0.6-3) ...
+Setting up libjpeg8-dev:armhf (8d-1) ...
+Setting up liblapack3 (3.4.1-5) ...
+update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
+Setting up liblapack-dev (3.4.1-5) ...
+update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
+Setting up libtinfo-dev:armhf (5.9-10) ...
+Setting up libncurses5-dev (5.9-10) ...
+Setting up libpaper-utils (1.1.24+nmu2) ...
+Setting up libpcre3-dev (1:8.30-5) ...
+Setting up zlib1g-dev:armhf (1:1.2.7.dfsg-13) ...
+Setting up libpng12-dev (1.2.49-2) ...
+Setting up libreadline6-dev:armhf (6.2-8+b1) ...
+Setting up libreadline-dev:armhf (6.2-8+b1) ...
+Setting up zip (3.0-6) ...
+Setting up unzip (6.0-7) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
-Setting up tcl8.5 (8.5.11-1) ...
-update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
-Setting up tk8.5 (8.5.11-1) ...
-update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up tcl8.5 (8.5.11-2) ...
+update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
+Setting up tk8.5 (8.5.11-2) ...
+update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
+Setting up r-base-core (2.15.1-4) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.1-4) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 11 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 6 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 3.2.0-1-mx5 armhf (armv7l)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.7-1
-Package versions: apt_0.8.15.9+b1 base-files_6.5+b1 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3+b1 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.41 debconf-i18n_1.5.41 debfoster_2.7-1.1+b1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1+b1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-3 gpgv_1.4.12-3 grep_2.10-1 groff-base_1.21-6+b1 gzip_1.4-2+b1 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2+b1 libblas3gf_1.2.20110419-2+b1 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2+b1 libffi5_3.0.10-3+b1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1+b1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10+b1 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2+b1 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblocale-gettext-perl_1.05-7+b3 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.10-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-3+b1 libncurses5_5.9-4+b1 libncurses5-dev_5.9-4+b1 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2+b1 libpaper-utils_1.1.24+nmu1+b1 libpaper1_1.1.24+nmu1+b1 libpcre3_8.12-4+b1 libpcre3-dev_8.12-4+b1 libpcrecpp0_8.12-4+b1 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libreadline-dev_6.2-8+b1 libreadline6_6.2-8+b1 libreadline6-dev_6.2-8+b1 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-1 libslang2_2.2.4-6 libsm6_2:1.2.0-2+b1 libss2_1.42.1-2 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4+b1 libtinfo5_5.9-4+b1 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4+b1 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4+b1 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4+b1 libxext6_2:1.3.0-3+b1 libxft2_2.2.0-3+b1 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2+b1 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2+b1 linux-libc-dev_3.2.7-1 login_1:4.1.5-1 lsb-base_3.2+Debian29 make_3.81-8.1+b1 man-db_2.6.1-1 mawk_1.3.3-16+b1 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-4+b1 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-7 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-5+b1 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3+b1 zip_3.0-4+b1 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: Linux 3.2.0-2-mx5 armhf (armv7l)
+Toolchain package versions: binutils_2.22-7 dpkg-dev_1.16.7 g++-4.6_4.6.3-8 gcc-4.6_4.6.3-8 libc6-dev_2.13-34 libstdc++6_4.7.1-5 libstdc++6-4.6-dev_4.6.3-8 linux-libc-dev_3.2.21-3
+Package versions: apt_0.9.7.1 base-files_6.11 base-passwd_3.5.26 bash_4.2-3 binutils_2.22-7 bsdmainutils_9.0.3 bsdutils_1:2.20.1-5.1 build-essential_11.5+b1 bzip2_1.0.6-3 cdbs_0.4.116 coreutils_8.13-3.2 cpp_4:4.6.3-7 cpp-4.6_4.6.3-8 dash_0.5.7-3 debconf_1.5.45 debconf-i18n_1.5.45 debfoster_2.7-1.1+b1 debhelper_9.20120608 debian-archive-keyring_2012.4 debianutils_4.3.2 diffutils_1:3.2-6 dpkg_1.16.7 dpkg-dev_1.16.7 e2fslibs_1.42.4-3 e2fsprogs_1.42.4-3 fakeroot_1.18.4-2 file_5.11-2 findutils_4.4.2-4 fontconfig_2.9.0-6 fontconfig-config_2.9.0-6 g++_4:4.6.3-7 g++-4.6_4.6.3-8 gcc_4:4.6.3-7 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.4-1 gcc-4.6_4.6.3-8 gcc-4.6-base_4.6.3-8 gcc-4.7-base_4.7.1-5 gettext_0.18.1.1-9 gettext-base_0.18.1.1-9 gfortran_4:4.6.3-7 gfortran-4.6_4.6.3-8 gnupg_1.4.12-4+b1 gpgv_1.4.12-4+b1 grep_2.12-2 groff-base_1.21-9 gzip_1.5-1.1 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-28 insserv_1.14.0-4 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-8 libapt-pkg4.12_0.9.7.1 libasprintf0c2_0.18.1.1-9 libattr1_1:2.4.46-8 libblas-dev_1.2.20110419-5 libblas3_1.2.20110419-5 libblkid1_2.20.1-5.1 libbz2-1.0_1.0.6-3 libbz2-dev_1.0.6-3 libc-bin_2.13-34 libc-dev-bin_2.13-34 libc6_2.13-34 libc6-dev_2.13-34 libcairo2_1.12.2-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.4-3 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-5 libdpkg-perl_1.16.7 libexpat1_2.1.0-1 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-2 libfontconfig1_2.9.0-6 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.1-5 libgdbm3_1.8.3-11 libgettextpo0_0.18.1.1-9 libgfortran3_4.7.1-5 libglib2.0-0_2.32.3-1 libgmp10_2:5.0.5+dfsg-2 libgomp1_4.7.1-5 libice6_2:1.0.8-2 libjbig0_2.0-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.4.1-5 liblapack3_3.4.1-5 liblocale-gettext-perl_1.05-7+b3 liblzma5_5.1.1alpha+20120614-1 libmagic1_5.11-2 libmount1_2.20.1-5.1 libmpc2_0.9-4+b1 libmpfr4_3.1.0-5 libncurses5_5.9-10 libncurses5-dev_5.9-10 libpam-modules_1.1.3-7.1 libpam-modules-bin_1.1.3-7.1 libpam-runtime_1.1.3-7.1 libpam0g_1.1.3-7.1 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu2 libpaper1_1.1.24+nmu2 libpcre3_1:8.30-5 libpcre3-dev_1:8.30-5 libpcrecpp0_1:8.30-5 libpipeline1_1.2.1-1 libpixman-1-0_0.26.0-3 libpng12-0_1.2.49-2 libpng12-dev_1.2.49-2 libreadline-dev_6.2-8+b1 libreadline6_6.2-8+b1 libreadline6-dev_6.2-8+b1 libselinux1_2.1.9-5 libsemanage-common_2.1.6-6 libsemanage1_2.1.6-6 libsepol1_2.1.4-3 libslang2_2.2.4-15 libsm6_2:1.2.1-2 libss2_1.42.4-3 libstdc++6_4.7.1-5 libstdc++6-4.6-dev_4.6.3-8 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.18-1 libthai0_0.1.18-1 libtiff4_3.9.6-6 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-10 libtinfo5_5.9-10 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-23 libustr-1.0-1_1.0.4-3 libuuid1_2.20.1-5.1 libx11-6_2:1.5.0-1 libx11-data_2:1.5.0-1 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.1-1 libxext6_2:1.3.1-2 libxft2_2.3.1-1 libxml2_2.8.0+dfsg1-4 libxrender1_1:0.9.7-1 libxss1_1:1.2.2-1 libxt6_1:1.1.3-1 linux-libc-dev_3.2.21-3 login_1:4.1.5.1-1 lsb-base_4.1+Debian7 make_3.81-8.2 man-db_2.6.2-1 mawk_1.3.3-17 mount_2.20.1-5.1 multiarch-support_2.13-34 ncurses-base_5.9-10 ncurses-bin_5.9-10 passwd_1:4.1.5.1-1 patch_2.6.1-3 perl_5.14.2-12 perl-base_5.14.2-12 perl-modules_5.14.2-12 po-debconf_1.0.16+nmu2 r-base-core_2.15.1-4 r-base-dev_2.15.1-4 readline-common_6.2-8 sed_4.2.1-10 sensible-utils_0.0.7 sudo_1.8.5p2-1 sysv-rc_2.88dsf-28 sysvinit_2.88dsf-28 sysvinit-utils_2.88dsf-28 tar_1.26-4 tcl8.5_8.5.11-2 tk8.5_8.5.11-2 ttf-dejavu-core_2.33-2 tzdata_2012c-1 ucf_3.0025+nmu3 unzip_6.0-7 util-linux_2.20.1-5.1 x11-common_1:7.7+1 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20120614-1 zip_3.0-6 zlib1g_1:1.2.7.dfsg-13 zlib1g-dev_1:1.2.7.dfsg-13
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -526,12 +554,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -541,8 +569,8 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -550,9 +578,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -581,15 +609,15 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build
+ debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -597,9 +625,9 @@ if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -613,44 +641,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.1-4)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -687,9 +715,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x/r-bioc-limma-3.10.3'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -714,72 +742,67 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_armhf.deb'.
- dpkg-genchanges -B -marmhf Build Daemon (hoiby) <buildd_armhf-hoiby at buildd.debian.org> >../r-bioc-limma_3.10.3-1_armhf.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_armhf.deb'.
+ dpkg-genchanges -B -marmhf Build Daemon (henze) <buildd_armhf-henze at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0612
+Build finished at 20120720-1527
-r-bioc-limma_3.10.3-1_armhf.changes:
+r-bioc-limma_3.12.0~dfsg-1_armhf.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: armhf
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: armhf Build Daemon (hoiby) <buildd_armhf-hoiby at buildd.debian.org>
+Maintainer: armhf Build Daemon (henze) <buildd_armhf-henze at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- eead82135c0373743a1497f41b8096e8aa03f97c 1474990 r-bioc-limma_3.10.3-1_armhf.deb
+ ce5d13a6df53c429e0197a41d694bf0bc5badb74 806362 r-bioc-limma_3.12.0~dfsg-1_armhf.deb
Checksums-Sha256:
- 1449b90712fe6a4e3b9482c76833c1c97c05f4f4b2a6bc0de1c3518c55fcf541 1474990 r-bioc-limma_3.10.3-1_armhf.deb
+ 529e06e376a90fbc5e9cecbc6823f24fff45000896e33c760dc061cada18a471 806362 r-bioc-limma_3.12.0~dfsg-1_armhf.deb
Files:
- 539584b6171f07715469956776127329 1474990 gnu-r optional r-bioc-limma_3.10.3-1_armhf.deb
+ cc03e9dd3707a22f09fc5e77a18a1700 806362 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_armhf.deb
-───────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_armhf.deb
+────────────────────────────────────
new debian package, version 2.0.
- size 1474990 bytes: control archive= 1569 bytes.
- 769 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 806362 bytes: control archive=1547 bytes.
+ 777 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1677
- Depends: libc6 (>= 2.4), r-base-core (>= 2.14.2-1)
+ Installed-Size: 981
+ Depends: libc6 (>= 2.13-28), r-base-core (>= 2.15.1-4)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -791,52 +814,51 @@ r-bioc-limma_3.10.3-1_armhf.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 06:12 ./
-drwxr-xr-x root/root 0 2012-03-07 06:12 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 06:12 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 06:12 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 06:12 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2012-03-07 06:10 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 560 2012-03-07 06:10 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 2302 2012-03-07 06:10 ./usr/share/doc/r-bioc-limma/copyright
-drwxr-xr-x root/root 0 2012-03-07 06:11 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 06:11 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 06:12 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 06:11 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 1901 2012-03-07 06:11 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 2173 2012-03-07 06:11 ./usr/lib/R/site-library/limma/NEWS.Rd
--rw-r--r-- root/root 9458 2012-03-07 06:11 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 06:11 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 34556 2012-03-07 06:11 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2012-03-07 06:11 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 974 2012-03-07 06:11 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2012-03-07 06:12 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 6688 2012-03-07 06:12 ./usr/lib/R/site-library/limma/libs/limma.so
--rwxr-xr-x root/root 1230 2012-03-07 06:11 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2012-03-07 06:11 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 3774 2012-03-07 06:11 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 383 2012-03-07 06:11 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 198254 2012-03-07 06:11 ./usr/lib/R/site-library/limma/R/limma.rdb
-drwxr-xr-x root/root 0 2012-03-07 06:11 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 673 2012-03-07 06:11 ./usr/lib/R/site-library/limma/doc/index.html
--rwxr-xr-x root/root 89361 2012-03-07 06:11 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 42743 2012-03-07 06:11 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 737677 2012-03-07 06:11 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rwxr-xr-x root/root 1711 2012-03-07 06:11 ./usr/lib/R/site-library/limma/doc/limma.Rnw
-drwxr-xr-x root/root 0 2012-03-07 06:11 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 2886 2012-03-07 06:11 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 6022 2012-03-07 06:11 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5603 2012-03-07 06:11 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 1062 2012-03-07 06:11 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 216 2012-03-07 06:11 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 518 2012-03-07 06:11 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
-drwxr-xr-x root/root 0 2012-03-07 06:11 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 6221 2012-03-07 06:11 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2392 2012-03-07 06:11 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 3270 2012-03-07 06:11 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 458790 2012-03-07 06:11 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 1352 2012-03-07 06:11 ./usr/lib/R/site-library/limma/help/paths.rds
+drwxr-xr-x root/root 0 2012-07-20 15:27 ./
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/lib/
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/lib/R/site-library/limma/
+drwxr-xr-x root/root 0 2012-07-20 15:27 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 6688 2012-07-20 15:27 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 974 2012-07-20 15:26 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rwxr-xr-x root/root 1230 2012-07-20 15:26 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 42743 2012-07-20 15:26 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 1711 2012-07-20 15:26 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rwxr-xr-x root/root 91993 2012-07-20 15:26 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rwxr-xr-x root/root 673 2012-07-20 15:26 ./usr/lib/R/site-library/limma/doc/index.html
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1367 2012-07-20 15:26 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 6317 2012-07-20 15:26 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 2431 2012-07-20 15:26 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 472770 2012-07-20 15:26 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3344 2012-07-20 15:26 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 3989 2012-07-20 15:26 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 1901 2012-07-20 15:26 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 522 2012-07-20 15:26 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 1065 2012-07-20 15:26 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 2945 2012-07-20 15:26 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 5729 2012-07-20 15:26 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 6159 2012-07-20 15:26 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 220 2012-07-20 15:26 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 35015 2012-07-20 15:26 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2012-07-20 15:26 ./usr/lib/R/site-library/limma/html/R.css
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 383 2012-07-20 15:26 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 202285 2012-07-20 15:26 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 3828 2012-07-20 15:26 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 9754 2012-07-20 15:26 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/share/
+drwxr-xr-x root/root 0 2012-07-20 15:26 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-07-20 15:27 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 264 2012-07-20 15:25 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 27996 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 683 2012-07-20 15:25 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 2457 2012-07-20 15:25 ./usr/share/doc/r-bioc-limma/copyright
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -850,7 +872,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-armhf-sbuild-cec436ce-43f0-4c3c-8e5f-e89287d8efa2/build/buildd-r-bioc-limma_3.10.3-1-armhf-fC6Q0x
+Purging /var/lib/schroot/mount/sid-armhf-sbuild-ae451b4d-e158-46b5-8310-daf046f6ad3f/build/buildd-r-bioc-limma_3.12.0~dfsg-1-armhf-nMHifX
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -858,19 +880,19 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: armhf
-Build-Space: 5336
-Build-Time: 104
+Build-Space: 3264
+Build-Time: 124
Distribution: sid
-Install-Time: 154
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 179
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 366
-Source-Version: 3.10.3-1
-Space: 5336
+Package-Time: 418
+Source-Version: 3.12.0~dfsg-1
+Space: 3264
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0612
-Build needed 00:06:06, 5336k disc space
-Signature with key 'AC057EAC' requested:
+Finished at 20120720-1527
+Build needed 00:06:58, 3264k disc space
+Signature with key '3CE79B5E' requested:
diff --git a/hurd-i386.log b/hurd-i386.log
index 47ab7cf..9f148f5 100644
--- a/hurd-i386.log
+++ b/hurd-i386.log
@@ -1,60 +1,67 @@
-From buildd at mozart.debian.net Wed Mar 07 06:54:41 2012
+From buildd at mozart.debian.net Thu Apr 12 05:30:39 2012
Return-path: <buildd at mozart.debian.net>
Received: from callisto.debian.net ([80.87.129.151])
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at mozart.debian.net>)
- id 1S5Alj-0006yb-Bk
- for logs at buildd.debian.org; Wed, 07 Mar 2012 06:54:40 +0000
+ id 1SICcA-0003fo-C6
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 05:30:39 +0000
Received: from mozart.debian.net ([10.1.0.1])
by callisto.debian.net with esmtp (Exim 4.72)
(envelope-from <buildd at mozart.debian.net>)
- id 1S5Alc-0007l0-QN; Wed, 07 Mar 2012 06:54:33 +0000
+ id 1SICc5-0008Ac-DC; Thu, 12 Apr 2012 06:30:33 +0100
Received: from buildd by mozart.debian.net with local (Exim 4.76)
(envelope-from <buildd at mozart.debian.net>)
- id 1S5Alo-0003oz-GP; Wed, 07 Mar 2012 06:54:44 +0000
+ id 1SICcS-0000lq-Sb; Thu, 12 Apr 2012 05:30:56 +0000
From: Build Daemon <buildd at mozart.debian.net>
To: samuel.thibault at ens-lyon.org, mbanck at gmx.net, logs at buildd.debian-ports.org,
logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on hurd-i386
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on hurd-i386
(dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
-Message-Id: <E1S5Alo-0003oz-GP at mozart.debian.net>
-Date: Wed, 07 Mar 2012 06:54:44 +0000
+Message-Id: <E1SICcS-0000lq-Sb at mozart.debian.net>
+Date: Thu, 12 Apr 2012 05:30:56 +0000
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on mozart.debian.net
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (hurd-i386) 07 mars 2012 06:37 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (hurd-i386) 12 avril 2012 05:07 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: hurd-i386
Hit http://ftp.fr.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Hit http://incoming.debian.org Release.gpg
Ign http://ftp.debian-ports.org unreleased InRelease
+Get:1 http://incoming.debian.org Release.gpg [836 B]
Hit http://ftp.fr.debian.org sid/main Sources/DiffIndex
Hit http://ftp.debian-ports.org unreleased Release.gpg
-Hit http://incoming.debian.org Release
+Get:2 http://incoming.debian.org Release [1601 B]
Hit http://ftp.fr.debian.org sid/contrib Sources/DiffIndex
Hit http://ftp.fr.debian.org sid/non-free Sources/DiffIndex
Hit http://ftp.fr.debian.org sid/main hurd-i386 Packages/DiffIndex
Hit http://ftp.fr.debian.org sid/contrib hurd-i386 Packages/DiffIndex
Ign http://ftp.fr.debian.org sid/contrib TranslationIndex
-Hit http://ftp.fr.debian.org sid/main TranslationIndex
+Get:3 http://ftp.fr.debian.org sid/main TranslationIndex [2223 B]
Hit http://ftp.debian-ports.org unreleased Release
-Hit http://ftp.fr.debian.org sid/contrib Translation-en
-Hit http://ftp.fr.debian.org sid/main Translation-en
-Hit http://incoming.debian.org Sources
-Hit http://incoming.debian.org Packages
+Get:4 http://ftp.fr.debian.org sid/main 2012-04-12-0211.19.pdiff [18.3 kB]
+Get:5 http://ftp.fr.debian.org sid/non-free 2012-04-12-0211.19.pdiff [430 B]
+Get:6 http://ftp.fr.debian.org sid/main hurd-i386 2012-04-12-0211.19.pdiff [40.5 kB]
+Get:7 http://ftp.fr.debian.org sid/contrib Translation-en [37.0 kB]
+Get:8 http://incoming.debian.org Sources [43.2 kB]
+Get:9 http://ftp.fr.debian.org sid/main 2012-04-12-0211.19.pdiff [18.3 kB]
+Get:10 http://ftp.fr.debian.org sid/main Translation-en [3936 kB]
Hit http://ftp.debian-ports.org unreleased/main hurd-i386 Packages
+Get:11 http://incoming.debian.org Packages [741 kB]
Ign http://ftp.debian-ports.org unreleased/main TranslationIndex
-Ign http://incoming.debian.org Translation-en
Ign http://ftp.debian-ports.org unreleased/main Translation-en
+Ign http://incoming.debian.org Translation-en
+Get:12 http://ftp.fr.debian.org sid/non-free 2012-04-12-0211.19.pdiff [430 B]
+Get:13 http://ftp.fr.debian.org sid/main hurd-i386 2012-04-12-0211.19.pdiff [40.5 kB]
+Fetched 4821 kB in 3min 38s (22.0 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -75,11 +82,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 27s (35.6 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 1s (207 kB/s)
Download complete and in download only mode
Check arch
@@ -101,18 +108,18 @@ Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libsysfs2 libusb-0.1-4p
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2 libusb-0.1-4p
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 74 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 89 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libsysfs2 libusb-0.1-4p
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2 libusb-0.1-4p
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 74 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 89 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -136,7 +143,7 @@ gzip: already installed (1.3.12-9)
hostname: already installed (3.06)
hurd: already installed (20111206-1)
ncurses-base: already installed (5.9-4)
-ncurses-bin: already installed (5.9-4)
+ncurses-bin: already installed (5.9-6)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
sysvinit-utils: already installed (2.88dsf-13.13)
@@ -144,16 +151,16 @@ sysvinit: already installed (2.88dsf-13.13)
tar: already installed (1.26-2)
bsdutils: already installed (1:2.19.1-5)
util-linux: already installed (2.19.1-5)
-libc0.3-dev: already installed (2.13-25)
+libc0.3-dev: already installed (2.13-27)
gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
g++: already installed (4:4.6.1-3 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
dpkg-dev: already installed (1.16.1.1 >= 1.13.5 is satisfied)
hurd-dev: already installed (20111206-1)
-debhelper: already installed (9.20120115 >= 8 is satisfied)
+debhelper: already installed (9.20120312 >= 8 is satisfied)
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
Installing positive dependencies: cdbs r-base-dev
Reading package lists...
@@ -161,7 +168,7 @@ Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libsysfs2 libusb-0.1-4p
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2 libusb-0.1-4p
Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
dpatch libblas-dev libblas3gf libbz2-dev libcairo2 libdatrie1 libice6
@@ -179,9 +186,9 @@ Suggested packages:
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils x-ttcidfont-conf r-recommended r-doc-html xterm
- x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
- libx11-protocol-perl x11-utils x11-xserver-utils
+ autotools-dev patchutils r-recommended r-doc-html xterm x-terminal-emulator
+ libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
+ x11-xserver-utils
The following NEW packages will be installed:
cdbs dpatch libblas-dev libblas3gf libbz2-dev libcairo2 libdatrie1 libice6
libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf libncurses5-dev
@@ -191,9 +198,9 @@ The following NEW packages will be installed:
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxrender1
libxss1 libxt6 r-base-core r-base-dev tcl8.5 tk8.5 unzip x11-common
xdg-utils zip
-0 upgraded, 47 newly installed, 0 to remove and 74 not upgraded.
-Need to get 0 B/36.8 MB of archives.
-After this operation, 73.5 MB of additional disk space will be used.
+0 upgraded, 47 newly installed, 0 to remove and 89 not upgraded.
+Need to get 21.6 MB/37.2 MB of archives.
+After this operation, 73.7 MB of additional disk space will be used.
WARNING: The following packages cannot be authenticated!
libpixman-1-0 libxau6 libxdmcp6 libxcb1 libx11-data libx11-6 libxcb-render0
libxcb-shm0 libxrender1 libcairo2 libdatrie1 x11-common libice6 libjpeg8
@@ -202,38 +209,43 @@ WARNING: The following packages cannot be authenticated!
libjpeg8-dev liblapack3gf liblapack-dev libtinfo-dev libncurses5-dev
libpaper1 libpaper-utils libpcre3-dev libpng12-dev libreadline6-dev
libreadline-dev zip unzip xdg-utils tcl8.5 tk8.5 r-base-core r-base-dev
+Authentication warning overridden.
+Get:1 http://ftp.fr.debian.org/debian/ sid/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:2 http://ftp.fr.debian.org/debian/ sid/main tk8.5 hurd-i386 8.5.11-1 [1182 kB]
+Get:3 http://ftp.fr.debian.org/debian/ sid/main r-base-core hurd-i386 2.15.0-1 [20.3 MB]
+Get:4 http://ftp.fr.debian.org/debian/ sid/main r-base-dev all 2.15.0-1 [3900 B]
Extracting templates from packages: 63%
Extracting templates from packages: 100%
Preconfiguring packages ...
-Authentication warning overridden.
+Fetched 21.6 MB in 45s (469 kB/s)
Selecting previously unselected package libpixman-1-0.
-(Reading database ... 15856 files and directories currently installed.)
+(Reading database ... 16833 files and directories currently installed.)
Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_hurd-i386.deb) ...
Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_hurd-i386.deb) ...
+Unpacking libxau6 (from .../libxau6_1%3a1.0.7-1_hurd-i386.deb) ...
Selecting previously unselected package libxdmcp6.
Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_hurd-i386.deb) ...
Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_hurd-i386.deb) ...
+Unpacking libxcb1 (from .../libxcb1_1.8.1-1_hurd-i386.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
Selecting previously unselected package libx11-6.
Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_hurd-i386.deb) ...
Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_hurd-i386.deb) ...
+Unpacking libxcb-render0 (from .../libxcb-render0_1.8.1-1_hurd-i386.deb) ...
Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_hurd-i386.deb) ...
+Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8.1-1_hurd-i386.deb) ...
Selecting previously unselected package libxrender1.
Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_hurd-i386.deb) ...
Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_hurd-i386.deb) ...
+Unpacking libcairo2 (from .../libcairo2_1.12.0-2_hurd-i386.deb) ...
Selecting previously unselected package libdatrie1.
Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_hurd-i386.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_hurd-i386.deb) ...
+Unpacking libice6 (from .../libice6_2%3a1.0.8-2_hurd-i386.deb) ...
Selecting previously unselected package libjpeg8.
Unpacking libjpeg8 (from .../libjpeg8_8d-1_hurd-i386.deb) ...
Selecting previously unselected package libthai-data.
@@ -243,13 +255,13 @@ Unpacking libthai0 (from .../libthai0_0.1.17-1_hurd-i386.deb) ...
Selecting previously unselected package libxft2.
Unpacking libxft2 (from .../libxft2_2.2.0-3_hurd-i386.deb) ...
Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_hurd-i386.deb) ...
+Unpacking libpango1.0-0 (from .../libpango1.0-0_1.30.0-1_hurd-i386.deb) ...
Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_hurd-i386.deb) ...
+Unpacking libpcrecpp0 (from .../libpcrecpp0_1%3a8.30-4_hurd-i386.deb) ...
Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_hurd-i386.deb) ...
+Unpacking libsm6 (from .../libsm6_2%3a1.2.1-2_hurd-i386.deb) ...
Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_hurd-i386.deb) ...
+Unpacking libtiff4 (from .../libtiff4_3.9.6-2_hurd-i386.deb) ...
Selecting previously unselected package libxext6.
Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3_hurd-i386.deb) ...
Selecting previously unselected package libxss1.
@@ -257,7 +269,7 @@ Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_hurd-i386.deb) ...
Selecting previously unselected package libxt6.
Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_hurd-i386.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
Selecting previously unselected package libblas3gf.
@@ -273,17 +285,17 @@ Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_hurd-i386.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_hurd-i386.deb) ...
Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_hurd-i386.deb) ...
+Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-6_hurd-i386.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_hurd-i386.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_hurd-i386.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_hurd-i386.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_hurd-i386.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_hurd-i386.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_hurd-i386.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_hurd-i386.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_hurd-i386.deb) ...
Selecting previously unselected package libreadline6-dev.
Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_hurd-i386.deb) ...
Selecting previously unselected package libreadline-dev.
@@ -291,7 +303,7 @@ Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_hurd-i386.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../zip_3.0-4_hurd-i386.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../unzip_6.0-5_hurd-i386.deb) ...
+Unpacking unzip (from .../unzip_6.0-6_hurd-i386.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -299,38 +311,38 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_hurd-i386.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_hurd-i386.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_hurd-i386.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_hurd-i386.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
Processing triggers for man-db ...
Processing triggers for install-info ...
Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
+Setting up libxau6 (1:1.0.7-1) ...
Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libxcb1 (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
+Setting up libxcb-render0 (1.8.1-1) ...
+Setting up libxcb-shm0 (1.8.1-1) ...
Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
+Setting up libcairo2 (1.12.0-2) ...
Setting up libdatrie1 (0.2.5-3) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
+Setting up libice6 (2:1.0.8-2) ...
Setting up libjpeg8 (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
Setting up libthai0 (0.1.17-1) ...
Setting up libxft2 (2.2.0-3) ...
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
+Setting up libpango1.0-0 (1.30.0-1) ...
+Setting up libpcrecpp0 (1:8.30-4) ...
+Setting up libsm6 (2:1.2.1-2) ...
+Setting up libtiff4 (3.9.6-2) ...
Setting up libxext6 (2:1.3.0-3) ...
Setting up libxss1 (1:1.2.1-2) ...
Setting up libxt6 (1:1.1.1-2) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
Setting up dpatch (2.0.35) ...
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
@@ -342,41 +354,41 @@ Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
-Setting up libpng12-dev (1.2.47-1) ...
+Setting up libpcre3-dev (1:8.30-4) ...
+Setting up libpng12-dev (1.2.49-1) ...
Setting up libreadline6-dev (6.2-8) ...
Setting up libreadline-dev (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.0-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libsysfs2 libusb-0.1-4p
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2 libusb-0.1-4p
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 74 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 89 not upgraded.
Checking correctness of dependencies...
Kernel: GNU 0.3 hurd-i386 (i686-AT386)
-Toolchain package versions: binutils_2.22-5+hurd.1 dpkg-dev_1.16.1.1 g++-4.5_4.5.3-9 g++-4.6_4.6.2-16+hurd.1 gcc-4.4_4.4.6-14 gcc-4.5_4.5.3-9 gcc-4.6_4.6.2-16+hurd.1 gnumach-dev_2:1.3.99.dfsg.git20111010-1 hurd-dev_20111206-1 libc0.3-dev_2.13-25 libstdc++6_4.6.2-16+hurd.1 libstdc++6-4.5-dev_4.5.3-9 libstdc++6-4.6-dev_4.6.2-16+hurd.1
-Package versions: adduser_3.113 apt_0.8.15.9 apt-utils_0.8.15.9 base-files_6.5 base-passwd_3.5.23 bash_4.1-3+hurd.1 binutils_2.22-5+hurd.1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpio_2.11-7 cpp_4:4.6.2-4 cpp-4.4_4.4.6-14 cpp-4.5_4.5.3-9 cpp-4.6_4.6.2-16+hurd.1 cron_3.0pl1-120 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debian-ports-archive-keyring_2012.01.08 debianutils_4.0.4 deborphan_1.7.28.5 dialog_1.1-20111020-1 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.1 dpkg-dev_1.16.1.1 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.1-1+hurd.1 file_5.10-1 findutils_4.4.2-1+b1 fontconfig_2.8.0-3 fontconfig-config_2.8.0-3.1 g++_4:4.6.1-3 g++-4.5_4.5.3-9 g++-4.6_4.6.2-16+hurd.1 gawk_1:3.1.8+dfsg-0.1 gcc_4:4.6.2-4 gcc-4.4_4.4.6-14 gcc-4.4-base_4.4.6-14 gcc-4.5_4.5.3-9 gcc-4.5-base_4.5.3-9 gcc-4.6_4.6.2-16+hurd.1 gcc-4.6-base_4.6.2-16+hurd.1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.1-3 gfortran-4.6_4.6.2-16+hurd.1 gnumach-dev_2:1.3.99.dfsg.git20111010-1 gnupg_1.4.11-3 gobjc-4.4_4.4.6-14 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-6 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15+b1 hurd_20111206-1 hurd-dev_20111206-1 initscripts_2.88dsf-13.13 insserv_1.14.0-2.1 install-info_4.13a.dfsg.1-8 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg-dev_0.8.15.9 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-1.2 libboost-iostreams1.46.1_1.46.1-8 libboost-iostreams1.48.0_1.48.0-3 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-25 libc-dev-bin_2.13-25 libc0.3_2.13-25 libc0.3-dev_2.13-25 libc0.3-xen_2.13-25 libcairo2_1.10.2-7 libclass-isa-perl_0.36-2 libcomerr2_1.42.1-2 libcroco3_0.6.2-2 libcwidget3_0.5.16-3.1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.1 libelfg0_0.8.13-3 libept-dev_1.0.5 libept1_1.0.5 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-16+hurd.1 libgcrypt11_1.5.0-3 libgdbm3_1.8.3-10 libgfortran3_4.6.2-16+hurd.1 libglib2.0-0_2.30.2-6 libglib2.0-data_2.28.8-1 libgmp10_2:5.0.4+dfsg-1 libgnutls26_2.12.16-1 libgomp1_4.6.2-16+hurd.1 libgpg-error0_1.10-3 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 libldap-2.4-2_2.4.28-1.1 liblocale-gettext-perl_1.05-7+b1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libncurses5-dev_5.9-4 libncursesw5_5.9-4 libobjc2_4.5.3-9 libp11-kit0_0.11-3 libpam-modules_1.1.3-5 libpam-modules-bin_1.1.3-5 libpam-runtime_1.1.3-5 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libparted0debian1_2.3-3+hurd.1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.0-4 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libpopt0_1.16-3 libpthread-stubs0_0.3-2.1+hurd.1 libpthread-stubs0-dev_0.3-2.1+hurd.1 libquadmath0_4.6.2-16+hurd.1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libsasl2-2_2.1.25.dfsg1-4 libsasl2-modules_2.1.25.dfsg1-4 libsigc++-2.0-0c2a_2.2.9-1.1 libsigsegv2_2.9-4 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42-1 libssl0.9.8_0.9.8o-7+b1 libssl1.0.0_1.0.0g-1 libstdc++6_4.6.2-16+hurd.1 libstdc++6-4.5-dev_4.5.3-9 libstdc++6-4.6-dev_4.6.2-16+hurd.1 libswitch-perl_2.16-2 libsysfs2_2.1.0+repack-1 libtagcoll2-dev_2.0.13-1 libtasn1-3_2.11-1 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-4+b1 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4p_2:0.1.12-13+hurd.1 libuuid1_2.20.1-4 libwibble-dev_0.1.26-1 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxapian-dev_1.2.7-1 libxapian22_1.2.7-1 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-2 mawk_1.3.3-16 multiarch-support_2.13-21 ncurses-base_5.9-4 ncurses-bin_5.9-4 netbase_4.47 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 pkg-config_0.26-1 po-debconf_1.0.16+nmu1 procps_1:3.2.8-11 psmisc_22.3-1 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-7 sed_4.2.1-9 sensible-utils_0.0.6 sgml-base_1.26+nmu1 shared-mime-info_0.90-1 sudo_1.7.2p7-1 sysv-rc_2.88dsf-13.13 sysvinit_2.88dsf-13.13 sysvinit-utils_2.88dsf-13.13 tar_1.26-2 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 type-handling_0.2.23 tzdata_2011n-1 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.19.1-5 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xml-core_0.13 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-1 zlib1g-dev_1:1.2.6.dfsg-1
+Toolchain package versions: binutils_2.22-5+hurd.1 dpkg-dev_1.16.1.1 g++-4.5_4.5.3-9 g++-4.6_4.6.3-1+hurd.2 gcc-4.4_4.4.6-14 gcc-4.5_4.5.3-9 gcc-4.6_4.6.3-1+hurd.2 gnumach-dev_2:1.3.99.dfsg.git20111010-1 hurd-dev_20111206-1 libc0.3-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.5-dev_4.5.3-9 libstdc++6-4.6-dev_4.6.3-1+hurd.2
+Package versions: adduser_3.113 apt_0.8.15.9 apt-utils_0.8.15.9 autopoint_0.18.1.1-5 base-files_6.5 base-passwd_3.5.23 bash_4.1-3+hurd.1 binutils_2.22-5+hurd.1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.6-1 ca-certificates_20120212 cdbs_0.4.109 coreutils_8.13-3 cpio_2.11-7 cpp_4:4.6.2-4 cpp-4.4_4.4.6-14 cpp-4.5_4.5.3-9 cpp-4.6_4.6.3-1+hurd.2 cron_3.0pl1-120 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120312 debian-archive-keyring_2010.08.28 debian-ports-archive-keyring_2012.01.08 debianutils_4.0.4 deborphan_1.7.28.5 dialog_1.1-20111020-1 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.1 dpkg-dev_1.16.1.1 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.1-1+hurd.1 file_5.11-1 findutils_4.4.2-1+b1 fontconfig_2.8.0-3 fontconfig-config_2.8.0-3.1 g++_4:4.6.1-3 g++-4.5_4.5.3-9 g++-4.6_4.6.3-1+hurd.2 gawk_1:3.1.8+dfsg-0.1 gcc_4:4.6.2-4 gcc-4.4_4.4.6-14 gcc-4.4-base_4.4.6-14 gcc-4.5_4.5.3-9 gcc-4.5-base_4.5.3-9 gcc-4.6_4.6.3-1+hurd.2 gcc-4.6-base_4.6.3-1+hurd.2 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.1-3 gfortran-4.6_4.6.3-1+hurd.2 git_1:1.7.9.1-1 git-man_1:1.7.9.1-1 gnumach-dev_2:1.3.99.dfsg.git20111010-1 gnupg_1.4.11-3 gobjc-4.4_4.4.6-14 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-7 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15+b1 hurd_20111206-1 hurd-dev_20111206-1 initscripts_2.88dsf-13.13 insserv_1.14.0-2.1 install-info_4.13a.dfsg.1-8 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libapt-pkg-dev_0.8.15.9 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libboost-iostreams1.46.1_1.46.1-8 libboost-iostreams1.48.0_1.48.0-3 libboost-iostreams1.49.0_1.49.0-2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc0.3_2.13-27 libc0.3-dev_2.13-27 libc0.3-xen_2.13-27 libcairo2_1.12.0-2 libclass-isa-perl_0.36-2 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libcurl3-gnutls_7.25.0-1 libcwidget3_0.5.16-3.1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.1 libelfg0_0.8.13-3 libept-dev_1.0.5 libept1_1.0.5 liberror-perl_0.17-1 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgcrypt11_1.5.0-3 libgdbm3_1.8.3-10 libgfortran3_4.7.0-3 libglib2.0-0_2.32.0-4 libglib2.0-data_2.28.8-1 libgmp10_2:5.0.4+dfsg-1 libgnutls26_2.12.18-1 libgomp1_4.7.0-3 libgpg-error0_1.10-3 libice6_2:1.0.8-2 libidn11_1.24-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 libldap-2.4-2_2.4.28-1.1 liblocale-gettext-perl_1.05-7+b1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncurses5-dev_5.9-6 libncursesw5_5.9-6 libobjc2_4.5.3-9 libp11-kit0_0.12-2 libpam-modules_1.1.3-5 libpam-modules-bin_1.1.3-5 libpam-runtime_1.1.3-5 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libparted0debian1_2.3-3+hurd.1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libpopt0_1.16-3 libpthread-stubs0_0.3-2.1+hurd.1 libpthread-stubs0-dev_0.3-2.1+hurd.1 libquadmath0_4.7.0-3 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 librtmp0_2.4+20111222.git4e06e21-1 libsasl2-2_2.1.25.dfsg1-4 libsasl2-modules_2.1.25.dfsg1-4 libsigc++-2.0-0c2a_2.2.10-0.1 libsigsegv2_2.9-4 libslang2_2.2.4-7 libsm6_2:1.2.1-2 libss2_1.42.1-2 libssh2-1_1.4.1-1 libssl0.9.8_0.9.8o-7+b1 libssl1.0.0_1.0.1-4 libstdc++6_4.7.0-3 libstdc++6-4.5-dev_4.5.3-9 libstdc++6-4.6-dev_4.6.3-1+hurd.2 libswitch-perl_2.16-2 libsysfs2_2.1.0+repack-1 libtagcoll2-dev_2.0.13-1 libtasn1-3_2.12-1 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-4+b1 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4p_2:0.1.12-13+hurd.1 libuuid1_2.20.1-4 libwibble-dev_0.1.26-1 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxapian-dev_1.2.7-1 libxapian22_1.2.7-1 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-2 mawk_1.3.3-16 multiarch-support_2.13-21 ncurses-base_5.9-4 ncurses-bin_5.9-6 netbase_4.47 openssl_1.0.1-2 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 pkg-config_0.26-1 po-debconf_1.0.16+nmu1 procps_1:3.2.8-11 psmisc_22.16-1+hurd.1 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-7 sed_4.2.1-9 sensible-utils_0.0.6 sgml-base_1.26+nmu1 shared-mime-info_0.90-1 sudo_1.7.2p7-1 sysv-rc_2.88dsf-13.13 sysvinit_2.88dsf-13.13 sysvinit-utils_2.88dsf-13.13 tar_1.26-2 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 type-handling_0.2.23 tzdata_2011n-1 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.19.1-5 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xml-core_0.13 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-1 zlib1g-dev_1:1.2.6.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -387,12 +399,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -402,8 +414,8 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture hurd-i386
/usr/bin/fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -411,9 +423,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -437,20 +449,20 @@ dh_clean
\) -exec rm -f {} \; \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
- debian/rules build
if test -d src; then \
find src -regex ".*\..*o" | \
xargs --no-run-if-empty -r rm; \
fi
+ debian/rules build
rm -f config.log config.status
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -459,9 +471,9 @@ if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
fi
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
/usr/bin/fakeroot debian/rules binary-arch
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
dh_testroot
@@ -474,44 +486,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/src'
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -550,7 +562,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -580,22 +592,22 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_hurd-i386.deb'.
- dpkg-genchanges -B -mDebian GNU/Hurd Build Daemon <buildd_hurd-i386-mozart at buildd.debian.org> >../r-bioc-limma_3.10.3-1_hurd-i386.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_hurd-i386.deb'.
+ dpkg-genchanges -B -mDebian GNU/Hurd Build Daemon <buildd_hurd-i386-mozart at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_hurd-i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0652
+Build finished at 20120412-0528
-r-bioc-limma_3.10.3-1_hurd-i386.changes:
+r-bioc-limma_3.12.0~dfsg-1_hurd-i386.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: hurd-i386
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
Maintainer: Debian GNU/Hurd Build Daemon <buildd_hurd-i386-mozart at buildd.debian.org>
@@ -603,44 +615,39 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 9c184a6137ff0a60030efb6cf6ef56fbfdc4bc0e 1475506 r-bioc-limma_3.10.3-1_hurd-i386.deb
+ cdfa15c312a3bfa983829c591f4338c1d30b4f17 808620 r-bioc-limma_3.12.0~dfsg-1_hurd-i386.deb
Checksums-Sha256:
- 5bbe20439c269987533aeaddaa1a8b039b99e4ccc2408c7083ae386c7a988fca 1475506 r-bioc-limma_3.10.3-1_hurd-i386.deb
+ 3dd54f50effcbcee652006435bac6c70fe7e7d66a9a5c1253fac869edfaadc9b 808620 r-bioc-limma_3.12.0~dfsg-1_hurd-i386.deb
Files:
- 0339f2007ef029ec677909cc93438cc8 1475506 gnu-r optional r-bioc-limma_3.10.3-1_hurd-i386.deb
+ 2ede441c8e31daaf866ebe3840a50a3b 808620 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_hurd-i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_hurd-i386.deb
-───────────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_hurd-i386.deb
+────────────────────────────────────────
new debian package, version 2.0.
- size 1475506 bytes: control archive= 1578 bytes.
- 777 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 808620 bytes: control archive= 1547 bytes.
+ 781 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: hurd-i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1680
- Depends: libc0.3 (>= 2.2.6), r-base-core (>= 2.14.2-1)
+ Installed-Size: 983
+ Depends: libc0.3 (>= 2.2.6), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -652,52 +659,51 @@ r-bioc-limma_3.10.3-1_hurd-i386.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 06:51 ./
-drwxr-xr-x root/root 0 2012-03-07 06:51 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 06:49 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 06:49 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 06:50 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 06:50 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 1901 2012-03-07 06:49 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 958 2012-03-07 06:49 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2012-03-07 06:50 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 1047 2012-03-07 06:49 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6022 2012-03-07 06:50 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5603 2012-03-07 06:50 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 2886 2012-03-07 06:50 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 216 2012-03-07 06:50 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 518 2012-03-07 06:50 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
-drwxr-xr-x root/root 0 2012-03-07 06:51 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 8120 2012-03-07 06:51 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2012-03-07 06:50 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 383 2012-03-07 06:50 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 198257 2012-03-07 06:50 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 3766 2012-03-07 06:50 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2012-03-07 06:50 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 89361 2012-03-07 06:50 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rwxr-xr-x root/root 673 2012-03-07 06:50 ./usr/lib/R/site-library/limma/doc/index.html
--rwxr-xr-x root/root 1711 2012-03-07 06:50 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 42743 2012-03-07 06:50 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 737677 2012-03-07 06:50 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rwxr-xr-x root/root 1230 2012-03-07 06:50 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 2173 2012-03-07 06:50 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 06:50 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1354 2012-03-07 06:50 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 459832 2012-03-07 06:50 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3276 2012-03-07 06:50 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6221 2012-03-07 06:50 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2392 2012-03-07 06:50 ./usr/lib/R/site-library/limma/help/aliases.rds
-drwxr-xr-x root/root 0 2012-03-07 06:50 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 34556 2012-03-07 06:50 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2012-03-07 06:50 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 9458 2012-03-07 06:50 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 06:51 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 06:51 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 06:51 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2012-03-07 06:47 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2302 2012-03-07 06:47 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 560 2012-03-07 06:47 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 05:25 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 05:25 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 1901 2012-04-12 05:25 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 958 2012-04-12 05:25 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 1048 2012-04-12 05:25 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 6157 2012-04-12 05:26 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5727 2012-04-12 05:26 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 2943 2012-04-12 05:26 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 220 2012-04-12 05:26 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 521 2012-04-12 05:26 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+drwxr-xr-x root/root 0 2012-04-12 05:27 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 8120 2012-04-12 05:27 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 383 2012-04-12 05:26 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 202049 2012-04-12 05:26 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 3829 2012-04-12 05:26 ./usr/lib/R/site-library/limma/R/limma.rdx
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 91993 2012-04-12 05:25 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rwxr-xr-x root/root 673 2012-04-12 05:25 ./usr/lib/R/site-library/limma/doc/index.html
+-rwxr-xr-x root/root 1711 2012-04-12 05:25 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 42743 2012-04-12 05:25 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 1230 2012-04-12 05:25 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 3989 2012-04-12 05:25 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1387 2012-04-12 05:26 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 473535 2012-04-12 05:26 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3348 2012-04-12 05:26 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 6317 2012-04-12 05:26 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 2431 2012-04-12 05:26 ./usr/lib/R/site-library/limma/help/aliases.rds
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 35015 2012-04-12 05:26 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2012-04-12 05:26 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 9754 2012-04-12 05:26 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 05:26 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 05:27 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 264 2012-04-12 05:22 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 2457 2012-04-12 05:22 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 27998 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 683 2012-04-12 05:22 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -711,21 +717,21 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /home/buildd/build/chroot-sid/build/buildd-r-bioc-limma_3.10.3-1-hurd-i386-GKhrqA
+Purging /home/buildd/build/chroot-sid/build/buildd-r-bioc-limma_3.12.0~dfsg-1-hurd-i386-Hr0sI3
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libsysfs2 libusb-0.1-4p
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2 libusb-0.1-4p
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 74 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 89 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libcwidget3 libsigc++-2.0-0c2a libboost-iostreams1.46.1
- libboost-iostreams1.48.0 libsysfs2 libusb-0.1-4p
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libsysfs2 libusb-0.1-4p
Use 'apt-get autoremove' to remove them.
The following packages will be REMOVED:
cdbs* dpatch* libblas-dev* libblas3gf* libbz2-dev* libcairo2* libdatrie1*
@@ -736,9 +742,9 @@ The following packages will be REMOVED:
libx11-data* libxau6* libxcb-render0* libxcb-shm0* libxcb1* libxdmcp6*
libxext6* libxft2* libxrender1* libxss1* libxt6* r-base-core* r-base-dev*
tcl8.5* tk8.5* unzip* x11-common* xdg-utils* zip*
-0 upgraded, 0 newly installed, 47 to remove and 74 not upgraded.
-After this operation, 73.5 MB disk space will be freed.
-(Reading database ... 18344 files and directories currently installed.)
+0 upgraded, 0 newly installed, 47 to remove and 89 not upgraded.
+After this operation, 73.7 MB disk space will be freed.
+(Reading database ... 19378 files and directories currently installed.)
Removing r-base-dev ...
Removing cdbs ...
Removing dpatch ...
@@ -827,18 +833,18 @@ Processing triggers for install-info ...
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: hurd-i386
-Build-Space: 5336
-Build-Time: 260
+Build-Space: 3268
+Build-Time: 309
Distribution: sid
-Install-Time: 416
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 575
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 883
-Source-Version: 3.10.3-1
-Space: 5336
+Package-Time: 1232
+Source-Version: 3.12.0~dfsg-1
+Space: 3268
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0652
-Build needed 00:14:43, 5336k disc space
+Finished at 20120412-0528
+Build needed 00:20:32, 3268k disc space
diff --git a/i386.log b/i386.log
index 6f4a8e1..857b686 100644
--- a/i386.log
+++ b/i386.log
@@ -1,48 +1,49 @@
-From buildd at murphy.debian.org Wed Mar 07 04:47:01 2012
+From buildd at murphy.debian.org Thu Apr 12 03:32:40 2012
Return-path: <buildd at murphy.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at murphy.debian.org>)
- id 1S58mD-00046f-0j
- for logs at buildd.debian.org; Wed, 07 Mar 2012 04:47:01 +0000
+ id 1SIAm0-00075g-Nw
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 03:32:40 +0000
Received: from murphy.debian.org ([70.103.162.31])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=murphy.debian.org, EMAIL=hostmaster at murphy.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at murphy.debian.org>)
- id 1S58mB-0006Au-Nm
- for logs at buildd.debian.org; Wed, 07 Mar 2012 04:47:00 +0000
+ id 1SIAlz-0003Px-IU
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 03:32:39 +0000
Received: from buildd by murphy.debian.org with local (Exim 4.72)
(envelope-from <buildd at murphy.debian.org>)
- id 1S58mA-0005Xl-5O; Wed, 07 Mar 2012 04:46:58 +0000
-Message-Id: <E1S58mA-0005Xl-5O at murphy.debian.org>
+ id 1SIAlx-0002Dy-TT; Thu, 12 Apr 2012 03:32:37 +0000
+Message-Id: <E1SIAlx-0002Dy-TT at murphy.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 7 Mar 2012 04:46:58 +0000
+Date: Thu, 12 Apr 2012 03:32:37 +0000
From: buildd on murphy <buildd at murphy.debian.org>
To: logs at buildd.debian.org,buildd-admin at murphy.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on i386 (dist=sid)
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on i386
+ (dist=sid)
Key-Id: 2B54027C
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on murphy.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (i386) 07 Mar 2012 04:44 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (i386) 12 Apr 2012 03:31 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: i386
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
Hit http://ftp.us.debian.org sid InRelease
-Get:1 http://incoming.debian.org Release.gpg [836 B]
+Hit http://incoming.debian.org Release.gpg
Hit http://incoming.debian.org sid/main Sources/DiffIndex
Hit http://ftp.us.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
@@ -50,20 +51,20 @@ Hit http://incoming.debian.org sid/main i386 Packages/DiffIndex
Hit http://incoming.debian.org sid/contrib i386 Packages/DiffIndex
Ign http://incoming.debian.org sid/contrib TranslationIndex
Hit http://incoming.debian.org sid/main TranslationIndex
-Get:2 http://incoming.debian.org Release [1616 B]
+Hit http://incoming.debian.org Release
Hit http://incoming.debian.org sid/contrib Translation-en
-Hit http://incoming.debian.org sid/main Translation-en
Hit http://ftp.us.debian.org sid/contrib Sources/DiffIndex
-Get:3 http://incoming.debian.org Sources [64.3 kB]
Hit http://ftp.us.debian.org sid/main i386 Packages/DiffIndex
Hit http://ftp.us.debian.org sid/contrib i386 Packages/DiffIndex
Ign http://ftp.us.debian.org sid/contrib TranslationIndex
-Get:4 http://ftp.us.debian.org sid/main TranslationIndex [2154 B]
-Get:5 http://incoming.debian.org Packages [853 kB]
-Get:6 http://ftp.us.debian.org sid/contrib Translation-en [37.1 kB]
-Get:7 http://ftp.us.debian.org sid/main Translation-en [3906 kB]
+Get:1 http://ftp.us.debian.org sid/main TranslationIndex [2223 B]
+Hit http://incoming.debian.org sid/main Translation-en
+Hit http://incoming.debian.org Sources
+Hit http://incoming.debian.org Packages
+Get:2 http://ftp.us.debian.org sid/contrib Translation-en [37.0 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 4865 kB in 21s (227 kB/s)
+Get:3 http://ftp.us.debian.org sid/main Translation-en [3936 kB]
+Fetched 3975 kB in 17s (229 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,11 +85,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 2s (337 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 1s (284 kB/s)
Download complete and in download only mode
Check arch
@@ -108,12 +109,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -124,38 +125,38 @@ Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diff
Checking for already installed dependencies...
base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
-bash: already installed (4.2-1)
-coreutils: already installed (8.13-3)
+bash: already installed (4.2-2)
+coreutils: already installed (8.13-3.1)
dash: already installed (0.5.7-3)
-debianutils: already installed (4.2.1)
+debianutils: already installed (4.3)
diffutils: already installed (1:3.2-2)
-dpkg: already installed (1.16.1.2)
-e2fsprogs: already installed (1.42.1-2)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-1)
findutils: already installed (4.4.2-4)
grep: already installed (2.10-1)
-gzip: already installed (1.4-2)
+gzip: already installed (1.4-5)
hostname: already installed (3.11)
-ncurses-base: already installed (5.9-4)
-ncurses-bin: already installed (5.9-4)
+ncurses-base: already installed (5.9-5)
+ncurses-bin: already installed (5.9-6)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
-sysvinit-utils: already installed (2.88dsf-22)
-sysvinit: already installed (2.88dsf-22)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
mount: already installed (2.20.1-4)
util-linux: already installed (2.20.1-4)
libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
@@ -184,10 +185,10 @@ Suggested packages:
texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
texlive-latex-extra texinfo texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
- libx11-protocol-perl x11-utils x11-xserver-utils
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl r-recommended r-doc-html xterm x-terminal-emulator
+ libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
+ x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext
gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian
@@ -201,108 +202,103 @@ The following NEW packages will be installed:
libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip
x11-common xdg-utils zip zlib1g-dev
-0 upgraded, 76 newly installed, 0 to remove and 4 not upgraded.
-Need to get 20.3 MB/55.4 MB of archives.
-After this operation, 118 MB of additional disk space will be used.
-Get:1 http://ftp.us.debian.org/debian/ sid/main dpatch all 2.0.35 [95.2 kB]
-Get:2 http://ftp.us.debian.org/debian/ sid/main unzip i386 6.0-5 [183 kB]
-Get:3 http://ftp.us.debian.org/debian/ sid/main r-base-core i386 2.14.2-1 [20.0 MB]
-Get:4 http://ftp.us.debian.org/debian/ sid/main r-base-dev all 2.14.2-1 [3894 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 20.3 MB in 1min 8s (297 kB/s)
-Selecting previously unselected package libpipeline1.
-(Reading database ... 10962 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_i386.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_i386.deb) ...
-Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-4_i386.deb) ...
-Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_i386.deb) ...
-Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_i386.deb) ...
+0 upgraded, 76 newly installed, 0 to remove and 8 not upgraded.
+Need to get 0 B/55.9 MB of archives.
+After this operation, 118 MB of additional disk space will be used.
+Selecting previously unselected package libpipeline1:i386.
+(Reading database ... 11029 files and directories currently installed.)
+Unpacking libpipeline1:i386 (from .../libpipeline1_1.2.1-1_i386.deb) ...
+Selecting previously unselected package libmagic1:i386.
+Unpacking libmagic1:i386 (from .../libmagic1_5.11-1_i386.deb) ...
+Selecting previously unselected package libpcre3:i386.
+Unpacking libpcre3:i386 (from .../libpcre3_1%3a8.30-4_i386.deb) ...
+Selecting previously unselected package libexpat1:i386.
+Unpacking libexpat1:i386 (from .../libexpat1_2.1.0-1_i386.deb) ...
+Selecting previously unselected package libfreetype6:i386.
+Unpacking libfreetype6:i386 (from .../libfreetype6_2.4.9-1_i386.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3.1_all.deb) ...
-Selecting previously unselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_i386.deb) ...
-Selecting previously unselected package libpixman-1-0.
-Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_i386.deb) ...
-Selecting previously unselected package libpng12-0.
-Unpacking libpng12-0 (from .../libpng12-0_1.2.47-1_i386.deb) ...
-Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_i386.deb) ...
-Selecting previously unselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_i386.deb) ...
-Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_i386.deb) ...
+Selecting previously unselected package libfontconfig1:i386.
+Unpacking libfontconfig1:i386 (from .../libfontconfig1_2.8.0-3.1_i386.deb) ...
+Selecting previously unselected package libpixman-1-0:i386.
+Unpacking libpixman-1-0:i386 (from .../libpixman-1-0_0.24.4-1_i386.deb) ...
+Selecting previously unselected package libpng12-0:i386.
+Unpacking libpng12-0:i386 (from .../libpng12-0_1.2.49-1_i386.deb) ...
+Selecting previously unselected package libxau6:i386.
+Unpacking libxau6:i386 (from .../libxau6_1%3a1.0.7-1_i386.deb) ...
+Selecting previously unselected package libxdmcp6:i386.
+Unpacking libxdmcp6:i386 (from .../libxdmcp6_1%3a1.1.0-4_i386.deb) ...
+Selecting previously unselected package libxcb1:i386.
+Unpacking libxcb1:i386 (from .../libxcb1_1.8.1-1_i386.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
-Selecting previously unselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_i386.deb) ...
-Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_i386.deb) ...
-Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_i386.deb) ...
-Selecting previously unselected package libxrender1.
-Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_i386.deb) ...
-Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_i386.deb) ...
-Selecting previously unselected package libffi5.
-Unpacking libffi5 (from .../libffi5_3.0.10-3_i386.deb) ...
-Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_i386.deb) ...
+Selecting previously unselected package libx11-6:i386.
+Unpacking libx11-6:i386 (from .../libx11-6_2%3a1.4.4-4_i386.deb) ...
+Selecting previously unselected package libxcb-render0:i386.
+Unpacking libxcb-render0:i386 (from .../libxcb-render0_1.8.1-1_i386.deb) ...
+Selecting previously unselected package libxcb-shm0:i386.
+Unpacking libxcb-shm0:i386 (from .../libxcb-shm0_1.8.1-1_i386.deb) ...
+Selecting previously unselected package libxrender1:i386.
+Unpacking libxrender1:i386 (from .../libxrender1_1%3a0.9.6-2_i386.deb) ...
+Selecting previously unselected package libcairo2:i386.
+Unpacking libcairo2:i386 (from .../libcairo2_1.12.0-2_i386.deb) ...
+Selecting previously unselected package libffi5:i386.
+Unpacking libffi5:i386 (from .../libffi5_3.0.10-3_i386.deb) ...
+Selecting previously unselected package libglib2.0-0:i386.
+Unpacking libglib2.0-0:i386 (from .../libglib2.0-0_2.32.0-4_i386.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_i386.deb) ...
-Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_i386.deb) ...
-Selecting previously unselected package libdatrie1.
-Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_i386.deb) ...
-Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_i386.deb) ...
+Selecting previously unselected package libcroco3:i386.
+Unpacking libcroco3:i386 (from .../libcroco3_0.6.5-1_i386.deb) ...
+Selecting previously unselected package libdatrie1:i386.
+Unpacking libdatrie1:i386 (from .../libdatrie1_0.2.5-3_i386.deb) ...
+Selecting previously unselected package libgfortran3:i386.
+Unpacking libgfortran3:i386 (from .../libgfortran3_4.7.0-3_i386.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
-Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_i386.deb) ...
-Selecting previously unselected package libjpeg8.
-Unpacking libjpeg8 (from .../libjpeg8_8d-1_i386.deb) ...
+Selecting previously unselected package libice6:i386.
+Unpacking libice6:i386 (from .../libice6_2%3a1.0.8-2_i386.deb) ...
+Selecting previously unselected package libjpeg8:i386.
+Unpacking libjpeg8:i386 (from .../libjpeg8_8d-1_i386.deb) ...
Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.17-1_all.deb) ...
-Selecting previously unselected package libthai0.
-Unpacking libthai0 (from .../libthai0_0.1.17-1_i386.deb) ...
-Selecting previously unselected package libxft2.
-Unpacking libxft2 (from .../libxft2_2.2.0-3_i386.deb) ...
+Selecting previously unselected package libthai0:i386.
+Unpacking libthai0:i386 (from .../libthai0_0.1.17-1_i386.deb) ...
+Selecting previously unselected package libxft2:i386.
+Unpacking libxft2:i386 (from .../libxft2_2.2.0-3_i386.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_i386.deb) ...
-Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_i386.deb) ...
-Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_i386.deb) ...
-Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_i386.deb) ...
-Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_i386.deb) ...
-Selecting previously unselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-5_i386.deb) ...
-Selecting previously unselected package libxext6.
-Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3_i386.deb) ...
-Selecting previously unselected package libxss1.
-Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_i386.deb) ...
-Selecting previously unselected package libxt6.
-Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_i386.deb) ...
+Selecting previously unselected package libpango1.0-0:i386.
+Unpacking libpango1.0-0:i386 (from .../libpango1.0-0_1.30.0-1_i386.deb) ...
+Selecting previously unselected package libpcrecpp0:i386.
+Unpacking libpcrecpp0:i386 (from .../libpcrecpp0_1%3a8.30-4_i386.deb) ...
+Selecting previously unselected package libsm6:i386.
+Unpacking libsm6:i386 (from .../libsm6_2%3a1.2.1-2_i386.deb) ...
+Selecting previously unselected package libtiff4:i386.
+Unpacking libtiff4:i386 (from .../libtiff4_3.9.6-2_i386.deb) ...
+Selecting previously unselected package libunistring0:i386.
+Unpacking libunistring0:i386 (from .../libunistring0_0.9.3-5_i386.deb) ...
+Selecting previously unselected package libxext6:i386.
+Unpacking libxext6:i386 (from .../libxext6_2%3a1.3.0-3_i386.deb) ...
+Selecting previously unselected package libxss1:i386.
+Unpacking libxss1:i386 (from .../libxss1_1%3a1.2.1-2_i386.deb) ...
+Selecting previously unselected package libxt6:i386.
+Unpacking libxt6:i386 (from .../libxt6_1%3a1.1.1-2_i386.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_i386.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6_i386.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-7_i386.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_i386.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_i386.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.10-1_i386.deb) ...
+Unpacking file (from .../archives/file_5.11-1_i386.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_i386.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_i386.deb) ...
Selecting previously unselected package gettext.
@@ -312,47 +308,47 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_i386.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-3_i386.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_i386.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_i386.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_i386.deb) ...
Selecting previously unselected package libblas-dev.
Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-2_i386.deb) ...
-Selecting previously unselected package libbz2-dev.
-Unpacking libbz2-dev (from .../libbz2-dev_1.0.6-1_i386.deb) ...
-Selecting previously unselected package libjpeg8-dev.
-Unpacking libjpeg8-dev (from .../libjpeg8-dev_8d-1_i386.deb) ...
+Selecting previously unselected package libbz2-dev:i386.
+Unpacking libbz2-dev:i386 (from .../libbz2-dev_1.0.6-1_i386.deb) ...
+Selecting previously unselected package libjpeg8-dev:i386.
+Unpacking libjpeg8-dev:i386 (from .../libjpeg8-dev_8d-1_i386.deb) ...
Selecting previously unselected package liblapack3gf.
Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_i386.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_i386.deb) ...
-Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_i386.deb) ...
+Selecting previously unselected package libtinfo-dev:i386.
+Unpacking libtinfo-dev:i386 (from .../libtinfo-dev_5.9-6_i386.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_i386.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_i386.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_i386.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_i386.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_i386.deb) ...
-Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_i386.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_i386.deb) ...
+Selecting previously unselected package zlib1g-dev:i386.
+Unpacking zlib1g-dev:i386 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_i386.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_i386.deb) ...
-Selecting previously unselected package libreadline6-dev.
-Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_i386.deb) ...
-Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_i386.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_i386.deb) ...
+Selecting previously unselected package libreadline6-dev:i386.
+Unpacking libreadline6-dev:i386 (from .../libreadline6-dev_6.2-8_i386.deb) ...
+Selecting previously unselected package libreadline-dev:i386.
+Unpacking libreadline-dev:i386 (from .../libreadline-dev_6.2-8_i386.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../archives/zip_3.0-4_i386.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../archives/unzip_6.0-5_i386.deb) ...
+Unpacking unzip (from .../archives/unzip_6.0-6_i386.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -360,114 +356,114 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_i386.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_i386.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_i386.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_i386.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libpcre3 (8.12-4) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
+Setting up libpipeline1:i386 (1.2.1-1) ...
+Setting up libmagic1:i386 (5.11-1) ...
+Setting up libpcre3:i386 (1:8.30-4) ...
+Setting up libexpat1:i386 (2.1.0-1) ...
+Setting up libfreetype6:i386 (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libpng12-0 (1.2.47-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
-Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libfontconfig1:i386 (2.8.0-3.1) ...
+Setting up libpixman-1-0:i386 (0.24.4-1) ...
+Setting up libpng12-0:i386 (1.2.49-1) ...
+Setting up libxau6:i386 (1:1.0.7-1) ...
+Setting up libxdmcp6:i386 (1:1.1.0-4) ...
+Setting up libxcb1:i386 (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libx11-6:i386 (2:1.4.4-4) ...
+Setting up libxcb-render0:i386 (1.8.1-1) ...
+Setting up libxcb-shm0:i386 (1.8.1-1) ...
+Setting up libxrender1:i386 (1:0.9.6-2) ...
+Setting up libcairo2:i386 (1.12.0-2) ...
+Setting up libffi5:i386 (3.0.10-3) ...
+Setting up libglib2.0-0:i386 (2.32.0-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libcroco3:i386 (0.6.5-1) ...
+Setting up libdatrie1:i386 (0.2.5-3) ...
+Setting up libgfortran3:i386 (4.7.0-3) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
-Setting up libjpeg8 (8d-1) ...
+Setting up libice6:i386 (2:1.0.8-2) ...
+Setting up libjpeg8:i386 (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3) ...
+Setting up libthai0:i386 (0.1.17-1) ...
+Setting up libxft2:i386 (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5) ...
-Setting up libxext6 (2:1.3.0-3) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2) ...
+Setting up libpango1.0-0:i386 (1.30.0-1) ...
+Setting up libpcrecpp0:i386 (1:8.30-4) ...
+Setting up libsm6:i386 (2:1.2.1-2) ...
+Setting up libtiff4:i386 (3.9.6-2) ...
+Setting up libunistring0:i386 (0.9.3-5) ...
+Setting up libxext6:i386 (2:1.3.0-3) ...
+Setting up libxss1:i386 (1:1.2.1-2) ...
+Setting up libxt6:i386 (1:1.1.1-2) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.1-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gfortran-4.6 (4.6.3-3) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
Setting up libblas-dev (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
+Setting up libbz2-dev:i386 (1.0.6-1) ...
+Setting up libjpeg8-dev:i386 (8d-1) ...
Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev:i386 (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8) ...
-Setting up libreadline-dev (6.2-8) ...
+Setting up libpcre3-dev (1:8.30-4) ...
+Setting up zlib1g-dev:i386 (1:1.2.6.dfsg-2) ...
+Setting up libpng12-dev (1.2.49-1) ...
+Setting up libreadline6-dev:i386 (6.2-8) ...
+Setting up libreadline-dev:i386 (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.0-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-686-bigmem i386 (i686)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.7-1
-Package versions: apt_0.8.15.9 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gawk_1:3.1.8+dfsg-0.1 gcc_4:4.6.2-4 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-3 gpgv_1.4.12-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-2 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libncurses5-dev_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libquadmath0_4.6.3-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-1 libsigsegv2_2.9-4 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42.1-2 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.7-1 login_1:4.1.5-1 lsb-base_3.2+Debian29 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.13-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.3-4 g++-4.6_4.6.3-3 gawk_1:3.1.8+dfsg-0.1 gcc_4:4.6.3-4 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-3 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.12.0-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libgfortran3_4.7.0-3 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 libice6_2:1.0.8-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncurses5-dev_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libquadmath0_4.7.0-3 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libsigsegv2_2.9-4 libslang2_2.2.4-7 libsm6_2:1.2.1-2 libss2_1.42.2-1 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-21 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-5 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -478,12 +474,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -493,8 +489,8 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture i386
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -502,9 +498,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -533,25 +529,25 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build
+ debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) insteadmake[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3'
-
+/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
-/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3'
+/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) insteadmake[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg'
+
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -565,44 +561,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -641,7 +637,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
- cd '/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -666,27 +662,27 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_i386.deb'.
- dpkg-genchanges -B -mi386 Build Daemon (murphy) <buildd_i386-murphy at buildd.debian.org> >../r-bioc-limma_3.10.3-1_i386.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_i386.deb'.
+ dpkg-genchanges -B -mi386 Build Daemon (murphy) <buildd_i386-murphy at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0446
+Build finished at 20120412-0332
-r-bioc-limma_3.10.3-1_i386.changes:
+r-bioc-limma_3.12.0~dfsg-1_i386.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: i386
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
Maintainer: i386 Build Daemon (murphy) <buildd_i386-murphy at buildd.debian.org>
@@ -694,44 +690,39 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- b8bdf61528f54b5689810bcd741fe3b739f270ca 1473910 r-bioc-limma_3.10.3-1_i386.deb
+ 9022d9c41524e87c8cb1233d3455c54920a07328 805608 r-bioc-limma_3.12.0~dfsg-1_i386.deb
Checksums-Sha256:
- 89ba71e13c512df40fdd0f8d93f4688b3b1aa44a99329367436ffa21cab12d9d 1473910 r-bioc-limma_3.10.3-1_i386.deb
+ 30aa5500a314cf59ed3f72feb44eabe26d1f77a4da8f1b70db25586bb5c54758 805608 r-bioc-limma_3.12.0~dfsg-1_i386.deb
Files:
- e95071865c64503ff465bd1b5d68d04b 1473910 gnu-r optional r-bioc-limma_3.10.3-1_i386.deb
+ 25628dedbf2dedff58252321d5f2a2ec 805608 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_i386.deb
-──────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_i386.deb
+───────────────────────────────────
new debian package, version 2.0.
- size 1473910 bytes: control archive= 1571 bytes.
- 770 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 805608 bytes: control archive= 1540 bytes.
+ 774 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1679
- Depends: libc6 (>= 2.1.3), r-base-core (>= 2.14.2-1)
+ Installed-Size: 982
+ Depends: libc6 (>= 2.1.3), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -743,52 +734,51 @@ r-bioc-limma_3.10.3-1_i386.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 9458 2012-03-07 04:46 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2012-03-07 04:46 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 34556 2012-03-07 04:46 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1901 2012-03-07 04:46 ./usr/lib/R/site-library/limma/NAMESPACE
--rwxr-xr-x root/root 1230 2012-03-07 04:46 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 8120 2012-03-07 04:46 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 198252 2012-03-07 04:46 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 383 2012-03-07 04:46 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 3779 2012-03-07 04:46 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 2173 2012-03-07 04:46 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 2392 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 458691 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 6221 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 1350 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 3274 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/limma.rdx
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 673 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 42743 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rwxr-xr-x root/root 89361 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 737677 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rwxr-xr-x root/root 1711 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/limma.Rnw
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 1050 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 216 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 518 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 6022 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 2886 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 5603 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 964 2012-03-07 04:46 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 560 2012-03-07 04:46 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 2302 2012-03-07 04:46 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 264 2012-03-07 04:46 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 9754 2012-04-12 03:32 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2012-04-12 03:32 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 35015 2012-04-12 03:32 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1901 2012-04-12 03:32 ./usr/lib/R/site-library/limma/NAMESPACE
+-rwxr-xr-x root/root 1230 2012-04-12 03:32 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 8120 2012-04-12 03:32 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 202042 2012-04-12 03:32 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 383 2012-04-12 03:32 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 3817 2012-04-12 03:32 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 3989 2012-04-12 03:32 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 2431 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 472353 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 6317 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 1372 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 3325 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/limma.rdx
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 673 2012-04-12 03:32 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 42743 2012-04-12 03:32 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 91993 2012-04-12 03:32 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rwxr-xr-x root/root 1711 2012-04-12 03:32 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 1051 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 220 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 521 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 6157 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 2943 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 5727 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 964 2012-04-12 03:32 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 683 2012-04-12 03:32 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 2457 2012-04-12 03:32 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 264 2012-04-12 03:32 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 27996 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -802,11 +792,11 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-i386-sbuild-9360c0d9-7115-4448-bcbc-25e0e811bffd/build/buildd-r-bioc-limma_3.10.3-1-i386-oxhv3K
+Purging /var/lib/schroot/mount/sid-i386-sbuild-35fb9096-19d5-4bfb-8d0b-9af40c334d88/build/buildd-r-bioc-limma_3.12.0~dfsg-1-i386-sebhmq
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 4 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
@@ -824,9 +814,9 @@ The following packages will be REMOVED:
libxext6* libxft2* libxml2* libxrender1* libxss1* libxt6* man-db*
po-debconf* r-base-core* r-base-dev* tcl8.5* tk8.5* ttf-dejavu-core* unzip*
x11-common* xdg-utils* zip* zlib1g-dev*
-0 upgraded, 0 newly installed, 76 to remove and 4 not upgraded.
+0 upgraded, 0 newly installed, 76 to remove and 8 not upgraded.
After this operation, 118 MB disk space will be freed.
-(Reading database ... 15020 files and directories currently installed.)
+(Reading database ... 15146 files and directories currently installed.)
Removing debhelper ...
Removing man-db ...
Purging configuration files for man-db ...
@@ -839,18 +829,18 @@ Purging configuration files for dpatch ...
Removing file ...
Removing r-base-core ...
Purging configuration files for r-base-core ...
-Removing libpango1.0-0 ...
-Purging configuration files for libpango1.0-0 ...
+Removing libpango1.0-0:i386 ...
+Purging configuration files for libpango1.0-0:i386 ...
Removing fontconfig ...
Purging configuration files for fontconfig ...
Removing tk8.5 ...
Purging configuration files for tk8.5 ...
-Removing libxft2 ...
-Purging configuration files for libxft2 ...
-Removing libcairo2 ...
-Purging configuration files for libcairo2 ...
-Removing libfontconfig1 ...
-Purging configuration files for libfontconfig1 ...
+Removing libxft2:i386 ...
+Purging configuration files for libxft2:i386 ...
+Removing libcairo2:i386 ...
+Purging configuration files for libcairo2:i386 ...
+Removing libfontconfig1:i386 ...
+Purging configuration files for libfontconfig1:i386 ...
Removing fontconfig-config ...
Purging configuration files for fontconfig-config ...
Removing po-debconf ...
@@ -869,76 +859,76 @@ Removing liblapack3gf ...
Purging configuration files for liblapack3gf ...
Removing libblas3gf ...
Purging configuration files for libblas3gf ...
-Removing libbz2-dev ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libthai0 ...
-Purging configuration files for libthai0 ...
-Removing libdatrie1 ...
-Purging configuration files for libdatrie1 ...
-Removing libexpat1 ...
-Purging configuration files for libexpat1 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
-Removing libffi5 ...
-Purging configuration files for libffi5 ...
-Removing libfreetype6 ...
-Purging configuration files for libfreetype6 ...
-Removing libgfortran3 ...
-Purging configuration files for libgfortran3 ...
-Removing libxt6 ...
-Purging configuration files for libxt6 ...
-Removing libsm6 ...
-Purging configuration files for libsm6 ...
-Removing libice6 ...
-Purging configuration files for libice6 ...
-Removing libtiff4 ...
-Purging configuration files for libtiff4 ...
-Removing libjpeg8-dev ...
-Removing libjpeg8 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
+Removing libbz2-dev:i386 ...
+Removing libcroco3:i386 ...
+Purging configuration files for libcroco3:i386 ...
+Removing libthai0:i386 ...
+Purging configuration files for libthai0:i386 ...
+Removing libdatrie1:i386 ...
+Purging configuration files for libdatrie1:i386 ...
+Removing libexpat1:i386 ...
+Purging configuration files for libexpat1:i386 ...
+Removing libglib2.0-0:i386 ...
+Purging configuration files for libglib2.0-0:i386 ...
+Removing libffi5:i386 ...
+Purging configuration files for libffi5:i386 ...
+Removing libfreetype6:i386 ...
+Purging configuration files for libfreetype6:i386 ...
+Removing libgfortran3:i386 ...
+Purging configuration files for libgfortran3:i386 ...
+Removing libxt6:i386 ...
+Purging configuration files for libxt6:i386 ...
+Removing libsm6:i386 ...
+Purging configuration files for libsm6:i386 ...
+Removing libice6:i386 ...
+Purging configuration files for libice6:i386 ...
+Removing libtiff4:i386 ...
+Purging configuration files for libtiff4:i386 ...
+Removing libjpeg8-dev:i386 ...
+Removing libjpeg8:i386 ...
+Removing libmagic1:i386 ...
+Purging configuration files for libmagic1:i386 ...
Removing libncurses5-dev ...
Removing libpaper-utils ...
Removing libpaper1 ...
Purging configuration files for libpaper1 ...
Removing libpcre3-dev ...
-Removing libpcrecpp0 ...
-Purging configuration files for libpcrecpp0 ...
-Removing libpcre3 ...
-Purging configuration files for libpcre3 ...
-Removing libpipeline1 ...
-Purging configuration files for libpipeline1 ...
-Removing libpixman-1-0 ...
-Purging configuration files for libpixman-1-0 ...
+Removing libpcrecpp0:i386 ...
+Purging configuration files for libpcrecpp0:i386 ...
+Removing libpcre3:i386 ...
+Purging configuration files for libpcre3:i386 ...
+Removing libpipeline1:i386 ...
+Purging configuration files for libpipeline1:i386 ...
+Removing libpixman-1-0:i386 ...
+Purging configuration files for libpixman-1-0:i386 ...
Removing libpng12-dev ...
-Removing libpng12-0 ...
-Purging configuration files for libpng12-0 ...
-Removing libreadline-dev ...
-Removing libreadline6-dev ...
+Removing libpng12-0:i386 ...
+Purging configuration files for libpng12-0:i386 ...
+Removing libreadline-dev:i386 ...
+Removing libreadline6-dev:i386 ...
Removing libthai-data ...
-Removing libtinfo-dev ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libxss1 ...
-Purging configuration files for libxss1 ...
-Removing libxrender1 ...
-Purging configuration files for libxrender1 ...
-Removing libxext6 ...
-Purging configuration files for libxext6 ...
-Removing libx11-6 ...
-Purging configuration files for libx11-6 ...
+Removing libtinfo-dev:i386 ...
+Removing libunistring0:i386 ...
+Purging configuration files for libunistring0:i386 ...
+Removing libxss1:i386 ...
+Purging configuration files for libxss1:i386 ...
+Removing libxrender1:i386 ...
+Purging configuration files for libxrender1:i386 ...
+Removing libxext6:i386 ...
+Purging configuration files for libxext6:i386 ...
+Removing libx11-6:i386 ...
+Purging configuration files for libx11-6:i386 ...
Removing libx11-data ...
-Removing libxcb-shm0 ...
-Purging configuration files for libxcb-shm0 ...
-Removing libxcb-render0 ...
-Purging configuration files for libxcb-render0 ...
-Removing libxcb1 ...
-Purging configuration files for libxcb1 ...
-Removing libxau6 ...
-Purging configuration files for libxau6 ...
-Removing libxdmcp6 ...
-Purging configuration files for libxdmcp6 ...
+Removing libxcb-shm0:i386 ...
+Purging configuration files for libxcb-shm0:i386 ...
+Removing libxcb-render0:i386 ...
+Purging configuration files for libxcb-render0:i386 ...
+Removing libxcb1:i386 ...
+Purging configuration files for libxcb1:i386 ...
+Removing libxau6:i386 ...
+Purging configuration files for libxau6:i386 ...
+Removing libxdmcp6:i386 ...
+Purging configuration files for libxdmcp6:i386 ...
Removing libxml2 ...
Purging configuration files for libxml2 ...
Removing tcl8.5 ...
@@ -952,25 +942,25 @@ invoke-rc.d: policy-rc.d denied execution of stop.
Purging configuration files for x11-common ...
Removing xdg-utils ...
Removing zip ...
-Removing zlib1g-dev ...
+Removing zlib1g-dev:i386 ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: i386
-Build-Space: 5328
-Build-Time: 22
+Build-Space: 3264
+Build-Time: 21
Distribution: sid
-Install-Time: 92
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 28
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 146
-Source-Version: 3.10.3-1
-Space: 5328
+Package-Time: 74
+Source-Version: 3.12.0~dfsg-1
+Space: 3264
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0446
-Build needed 00:02:26, 5328k disc space
+Finished at 20120412-0332
+Build needed 00:01:14, 3264k disc space
Signature with key '2B54027C' requested:
diff --git a/ia64.log b/ia64.log
index 76f4973..c2b10fb 100644
--- a/ia64.log
+++ b/ia64.log
@@ -1,161 +1,70 @@
-From buildd at caballero.debian.org Wed Mar 07 08:42:01 2012
-Return-path: <buildd at caballero.debian.org>
+From buildd at alkman.debian.org Thu Apr 12 03:38:05 2012
+Return-path: <buildd at alkman.debian.org>
Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=kokkonen.debian.org,
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at caballero.debian.org>)
- id 1S5CRc-0006Eb-SA
- for logs at buildd.debian.org; Wed, 07 Mar 2012 08:42:01 +0000
-Received: from caballero.debian.org ([193.201.200.200])
+ (Exim 4.72) (envelope-from <buildd at alkman.debian.org>)
+ id 1SIArE-0007f6-NY
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 03:38:05 +0000
+Received: from alkman.debian.org ([192.25.206.63])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=caballero.debian.org,
- EMAIL=hostmaster at caballero.debian.org (verified)
+ CN=alkman.debian.org, EMAIL=hostmaster at alkman.debian.org (verified)
by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at caballero.debian.org>)
- id 1S5CRb-0004LN-S4; Wed, 07 Mar 2012 08:42:00 +0000
-Received: from buildd by caballero.debian.org with local (Exim 4.72)
- (envelope-from <buildd at caballero.debian.org>) id 1S5CRb-0004os-Ep
- for buildd-porters at caballero.debian.org; Wed, 07 Mar 2012 08:41:59 +0000
-Date: Wed, 07 Mar 2012 08:41:59 +0000
-Message-Id: <E1S5CRb-0004os-Ep at caballero.debian.org>
-From: buildd on caballero <buildd at caballero.debian.org>
-To: buildd-porters at caballero.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on ia64 (dist=sid)
+ (Exim 4.72) (envelope-from <buildd at alkman.debian.org>)
+ id 1SIArC-0007o4-Va
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 03:38:03 +0000
+Received: from buildd by alkman.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at alkman.debian.org>)
+ id 1SIArA-0005bg-QT; Thu, 12 Apr 2012 03:38:00 +0000
+Date: Thu, 12 Apr 2012 03:38:00 +0000
+Message-Id: <E1SIArA-0005bg-QT at alkman.debian.org>
+From: buildd on alkman <buildd at alkman.debian.org>
+To: buildd-porters at alkman.debian.org,logs at buildd.debian.org
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on ia64
+ (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
-Delivered-To: buildd-porters at caballero.debian.org
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on caballero.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on alkman.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (ia64) 07 Mar 2012 08:39 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (ia64) 12 Apr 2012 03:32 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: ia64
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Hit http://mirror.positive-internet.com sid InRelease
-Hit http://mirror.positive-internet.com sid/main Sources/DiffIndex
-Hit http://incoming.debian.org sid InRelease
+Get:1 http://spohr.debian.org unstable InRelease [208 kB]
+Get:2 http://incoming.debian.org unstable InRelease [208 kB]
+Get:3 http://spohr.debian.org unstable/main Sources [6221 kB]
+Get:4 http://spohr.debian.org unstable/contrib Sources [54.5 kB]
+Get:5 http://spohr.debian.org unstable/non-free Sources [97.7 kB]
+Get:6 http://spohr.debian.org unstable/main ia64 Packages [5671 kB]
Ign http://incoming.debian.org InRelease
-Hit http://mirror.positive-internet.com sid/contrib Sources/DiffIndex
-Hit http://mirror.positive-internet.com sid/main ia64 Packages/DiffIndex
-Hit http://mirror.positive-internet.com sid/contrib ia64 Packages/DiffIndex
-Ign http://mirror.positive-internet.com sid/contrib TranslationIndex
-Hit http://mirror.positive-internet.com sid/main TranslationIndex
-Hit http://incoming.debian.org Release.gpg
-Hit http://mirror.positive-internet.com sid/contrib Translation-en
-Hit http://mirror.positive-internet.com sid/main Translation-en
-Hit http://incoming.debian.org sid/main Sources/DiffIndex
-Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
-Hit http://incoming.debian.org sid/main ia64 Packages/DiffIndex
-Hit http://incoming.debian.org sid/contrib ia64 Packages/DiffIndex
-Ign http://incoming.debian.org sid/contrib TranslationIndex
-Hit http://incoming.debian.org sid/main TranslationIndex
-Hit http://incoming.debian.org Release
-Ign http://incoming.debian.org sid/main 2012-03-07-0816.46.pdiff
-Ign http://incoming.debian.org sid/main ia64 2012-03-07-0816.46.pdiff
-Hit http://incoming.debian.org sid/contrib Translation-en
-Hit http://incoming.debian.org sid/main Translation-en
-Hit http://incoming.debian.org sid/main
-Hit http://incoming.debian.org sid/main ia64
-Hit http://incoming.debian.org Sources
-Hit http://incoming.debian.org Packages
+Get:7 http://incoming.debian.org Release.gpg [836 B]
+Get:8 http://incoming.debian.org unstable/main Sources [6221 kB]
+Get:9 http://spohr.debian.org unstable/contrib ia64 Packages [37.2 kB]
+Ign http://spohr.debian.org unstable/contrib TranslationIndex
+Get:10 http://spohr.debian.org unstable/main TranslationIndex [2223 B]
+Get:11 http://spohr.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://spohr.debian.org unstable/main Translation-en [3936 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [54.5 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.7 kB]
+Get:15 http://incoming.debian.org unstable/main ia64 Packages [5671 kB]
+Get:16 http://incoming.debian.org unstable/contrib ia64 Packages [37.2 kB]
+Ign http://incoming.debian.org unstable/contrib TranslationIndex
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3936 kB]
+Get:21 http://incoming.debian.org Sources [42.9 kB]
+Get:22 http://incoming.debian.org Packages [682 kB]
Ign http://incoming.debian.org Translation-en
+Fetched 33.3 MB in 28s (1167 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -167,80 +76,20 @@ Check APT
─────────
Checking available source versions...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Download source files with APT
──────────────────────────────
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 1s (867 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 0s (355 kB/s)
Download complete and in download only mode
Check arch
@@ -253,170 +102,26 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
build-essential: already installed (11.5)
-fakeroot: already installed (1.18.1-1)
+fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Installing positive dependencies:
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 40 not upgraded.
+The following packages were automatically installed and are no longer required:
+ libppl9 libpwl5 libppl-c4 libcloog-ppl0 libgmpxx4ldbl
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 70 not upgraded.
Removing negative dependencies:
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 40 not upgraded.
+The following packages were automatically installed and are no longer required:
+ libppl9 libpwl5 libppl-c4 libcloog-ppl0 libgmpxx4ldbl
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 70 not upgraded.
Checking correctness of dependencies...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install r-bioc-limma build dependencies (internal resolver) │
@@ -424,196 +129,232 @@ I: This option will be removed in the future; please update your configuration
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6.1-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
Checking for already installed dependencies...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
base-files: already installed (6.5)
base-passwd: already installed (3.5.24)
-bash: already installed (4.1-3)
+bash: already installed (4.2-1)
coreutils: already installed (8.13-3)
dash: already installed (0.5.7-2)
-debianutils: already installed (4.0.4)
+debianutils: already installed (4.2.1)
diffutils: already installed (1:3.2-1)
dpkg: already installed (1.16.1.2)
-e2fsprogs: already installed (1.42.1-2)
-findutils: already installed (4.4.2-1+b1)
-grep: already installed (2.9-2)
+e2fsprogs: already installed (1.42-1)
+findutils: already installed (4.4.2-4)
+grep: already installed (2.10-1)
gzip: already installed (1.4-2)
-hostname: already installed (3.06)
+hostname: already installed (3.10)
ncurses-base: already installed (5.9-4)
ncurses-bin: already installed (5.9-4)
-perl-base: already installed (5.14.2-9)
+perl-base: already installed (5.14.2-7)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-13.13)
-sysvinit: already installed (2.88dsf-13.13)
-tar: already installed (1.26-3)
-bsdutils: already installed (1:2.19.1-5)
-mount: already installed (2.19.1-5)
-util-linux: already installed (2.19.1-5)
+sysvinit-utils: already installed (2.88dsf-22)
+sysvinit: already installed (2.88dsf-22)
+tar: already installed (1.26-4)
+bsdutils: already installed (1:2.20.1-1.2)
+mount: already installed (2.20.1-1.2)
+util-linux: already installed (2.20.1-1.2)
libc6.1-dev: already installed (2.13-26)
gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.2-1 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Installing positive dependencies: debhelper cdbs r-base-dev
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
+The following packages were automatically installed and are no longer required:
+ libppl9 libpwl5 libppl-c4 libcloog-ppl0 libgmpxx4ldbl
+Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
- bsdmainutils dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
- libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
- libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
- po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common
- xdg-utils zip zlib1g-dev
+ bsdmainutils cpp cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
+ gcc gcc-4.6 gcc-4.6-base gcc-4.7-base gettext gettext-base gfortran
+ gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf
+ libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1
+ libfreetype6 libgcc1 libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5
+ libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libquadmath0
+ libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev
+ libthai-data libthai0 libtiff4 libtinfo-dev libtinfo5 libunistring0 libx11-6
+ libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
+ libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
+ r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip
+ zlib1g zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make curl defoma gettext-doc
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ curl defoma gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib manpages-dev
+ autoconf automake1.9 libtool flex bison gdb gcc-doc libmudflap0-4.6-dev
+ libgcc1-dbg libgomp1-dbg libquadmath0-dbg libmudflap0-dbg gettext-doc
gfortran-doc gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp less www-browser libmail-box-perl r-doc-info r-doc-pdf
- r-mathlib r-base-html texlive-base texlive-latex-base
+ ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info libgpm2
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext
- gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian
- libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi5 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
- libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
- po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip
- x11-common xdg-utils zip zlib1g-dev
-0 upgraded, 77 newly installed, 0 to remove and 40 not upgraded.
-Need to get 21.4 MB/71.8 MB of archives.
-After this operation, 182 MB of additional disk space will be used.
-Get:1 http://mirror.positive-internet.com/debian/ sid/main r-base-core ia64 2.14.2-1 [21.3 MB]
-Get:2 http://mirror.positive-internet.com/debian/ sid/main r-base-dev all 2.14.2-1 [3894 B]
+ bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config
+ gcc-4.7-base gettext gettext-base gfortran gfortran-4.6 groff-base html2text
+ intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgfortran3
+ libglib2.0-0 libice6 libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf
+ libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3
+ libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4
+ libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
+ libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
+ libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core
+ unzip x11-common xdg-utils zip zlib1g-dev
+The following packages will be upgraded:
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base libgcc1 libgomp1 libncurses5
+ libquadmath0 libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin zlib1g
+15 upgraded, 77 newly installed, 0 to remove and 55 not upgraded.
+Need to get 95.8 MB of archives.
+After this operation, 180 MB of additional disk space will be used.
+Get:1 http://spohr.debian.org/debian/ unstable/main ncurses-bin ia64 5.9-6 [361 kB]
+Get:2 http://spohr.debian.org/debian/ unstable/main gcc-4.7-base ia64 4.7.0-3 [139 kB]
+Get:3 http://spohr.debian.org/debian/ unstable/main libgcc1 ia64 1:4.7.0-3 [46.4 kB]
+Get:4 http://spohr.debian.org/debian/ unstable/main libstdc++6 ia64 4.7.0-3 [437 kB]
+Get:5 http://spohr.debian.org/debian/ unstable/main libtinfo5 ia64 5.9-6 [302 kB]
+Get:6 http://spohr.debian.org/debian/ unstable/main libncurses5 ia64 5.9-6 [350 kB]
+Get:7 http://spohr.debian.org/debian/ unstable/main zlib1g ia64 1:1.2.6.dfsg-2 [117 kB]
+Get:8 http://spohr.debian.org/debian/ unstable/main libpipeline1 ia64 1.2.1-1 [48.2 kB]
+Get:9 http://spohr.debian.org/debian/ unstable/main libmagic1 ia64 5.11-1 [275 kB]
+Get:10 http://spohr.debian.org/debian/ unstable/main libpcre3 ia64 1:8.30-4 [294 kB]
+Get:11 http://spohr.debian.org/debian/ unstable/main libexpat1 ia64 2.1.0-1 [215 kB]
+Get:12 http://spohr.debian.org/debian/ unstable/main libfreetype6 ia64 2.4.9-1 [627 kB]
+Get:13 http://spohr.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:14 http://spohr.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:15 http://spohr.debian.org/debian/ unstable/main libfontconfig1 ia64 2.8.0-3.1 [319 kB]
+Get:16 http://spohr.debian.org/debian/ unstable/main libpixman-1-0 ia64 0.24.4-1 [434 kB]
+Get:17 http://spohr.debian.org/debian/ unstable/main libpng12-0 ia64 1.2.49-1 [222 kB]
+Get:18 http://spohr.debian.org/debian/ unstable/main libxau6 ia64 1:1.0.7-1 [20.1 kB]
+Get:19 http://spohr.debian.org/debian/ unstable/main libxdmcp6 ia64 1:1.1.0-4 [26.2 kB]
+Get:20 http://spohr.debian.org/debian/ unstable/main libxcb1 ia64 1.8.1-1 [56.7 kB]
+Get:21 http://spohr.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
+Get:22 http://spohr.debian.org/debian/ unstable/main libx11-6 ia64 2:1.4.4-4 [1080 kB]
+Get:23 http://spohr.debian.org/debian/ unstable/main libxcb-render0 ia64 1.8.1-1 [19.7 kB]
+Get:24 http://spohr.debian.org/debian/ unstable/main libxcb-shm0 ia64 1.8.1-1 [10.9 kB]
+Get:25 http://spohr.debian.org/debian/ unstable/main libxrender1 ia64 1:0.9.6-2 [41.8 kB]
+Get:26 http://spohr.debian.org/debian/ unstable/main libcairo2 ia64 1.12.0-2 [1179 kB]
+Get:27 http://spohr.debian.org/debian/ unstable/main libffi5 ia64 3.0.10-3 [35.5 kB]
+Get:28 http://spohr.debian.org/debian/ unstable/main libglib2.0-0 ia64 2.32.0-4 [2409 kB]
+Get:29 http://spohr.debian.org/debian/ unstable/main libxml2 ia64 2.7.8.dfsg-7 [1179 kB]
+Get:30 http://spohr.debian.org/debian/ unstable/main libcroco3 ia64 0.6.5-1 [175 kB]
+Get:31 http://spohr.debian.org/debian/ unstable/main libdatrie1 ia64 0.2.5-3 [32.5 kB]
+Get:32 http://spohr.debian.org/debian/ unstable/main libquadmath0 ia64 4.7.0-3 [165 kB]
+Get:33 http://spohr.debian.org/debian/ unstable/main libgfortran3 ia64 4.7.0-3 [469 kB]
+Get:34 http://spohr.debian.org/debian/ unstable/main libgomp1 ia64 4.7.0-3 [39.0 kB]
+Get:35 http://spohr.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
+Get:36 http://spohr.debian.org/debian/ unstable/main libice6 ia64 2:1.0.8-2 [82.2 kB]
+Get:37 http://spohr.debian.org/debian/ unstable/main libjpeg8 ia64 8d-1 [244 kB]
+Get:38 http://spohr.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
+Get:39 http://spohr.debian.org/debian/ unstable/main libthai0 ia64 0.1.17-1 [49.4 kB]
+Get:40 http://spohr.debian.org/debian/ unstable/main libxft2 ia64 2.2.0-3 [77.5 kB]
+Get:41 http://spohr.debian.org/debian/ unstable/main fontconfig ia64 2.8.0-3.1 [340 kB]
+Get:42 http://spohr.debian.org/debian/ unstable/main libpango1.0-0 ia64 1.30.0-1 [581 kB]
+Get:43 http://spohr.debian.org/debian/ unstable/main libpcrecpp0 ia64 1:8.30-4 [128 kB]
+Get:44 http://spohr.debian.org/debian/ unstable/main libsm6 ia64 2:1.2.1-2 [40.9 kB]
+Get:45 http://spohr.debian.org/debian/ unstable/main libtiff4 ia64 3.9.6-2 [274 kB]
+Get:46 http://spohr.debian.org/debian/ unstable/main libunistring0 ia64 0.9.3-5 [463 kB]
+Get:47 http://spohr.debian.org/debian/ unstable/main libxext6 ia64 2:1.3.0-3 [68.0 kB]
+Get:48 http://spohr.debian.org/debian/ unstable/main libxss1 ia64 1:1.2.1-2 [19.0 kB]
+Get:49 http://spohr.debian.org/debian/ unstable/main libxt6 ia64 1:1.1.1-2 [286 kB]
+Get:50 http://spohr.debian.org/debian/ unstable/main bsdmainutils ia64 9.0.1 [240 kB]
+Get:51 http://spohr.debian.org/debian/ unstable/main groff-base ia64 1.21-7 [1376 kB]
+Get:52 http://spohr.debian.org/debian/ unstable/main man-db ia64 2.6.1-2 [1156 kB]
+Get:53 http://spohr.debian.org/debian/ unstable/main g++-4.6 ia64 4.6.3-3 [7233 kB]
+Get:54 http://spohr.debian.org/debian/ unstable/main libstdc++6-4.6-dev ia64 4.6.3-3 [1833 kB]
+Get:55 http://spohr.debian.org/debian/ unstable/main gcc-4.6 ia64 4.6.3-3 [6323 kB]
+Get:56 http://spohr.debian.org/debian/ unstable/main cpp-4.6 ia64 4.6.3-3 [6049 kB]
+Get:57 http://spohr.debian.org/debian/ unstable/main gcc-4.6-base ia64 4.6.3-3 [140 kB]
+Get:58 http://spohr.debian.org/debian/ unstable/main file ia64 5.11-1 [55.3 kB]
+Get:59 http://spohr.debian.org/debian/ unstable/main gettext-base ia64 0.18.1.1-5 [173 kB]
+Get:60 http://spohr.debian.org/debian/ unstable/main cdbs all 0.4.109 [79.4 kB]
+Get:61 http://spohr.debian.org/debian/ unstable/main cpp ia64 4:4.6.3-4 [16.3 kB]
+Get:62 http://spohr.debian.org/debian/ unstable/main html2text ia64 1.3.2a-15 [134 kB]
+Get:63 http://spohr.debian.org/debian/ unstable/main gettext ia64 0.18.1.1-5 [2439 kB]
+Get:64 http://spohr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:65 http://spohr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:66 http://spohr.debian.org/debian/ unstable/main debhelper all 9.20120410 [694 kB]
+Get:67 http://spohr.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
+Get:68 http://spohr.debian.org/debian/ unstable/main gcc ia64 4:4.6.3-4 [5022 B]
+Get:69 http://spohr.debian.org/debian/ unstable/main gfortran-4.6 ia64 4.6.3-3 [7138 kB]
+Get:70 http://spohr.debian.org/debian/ unstable/main gfortran ia64 4:4.6.3-4 [1122 B]
+Get:71 http://spohr.debian.org/debian/ unstable/main libblas3gf ia64 1.2.20110419-2 [313 kB]
+Get:72 http://spohr.debian.org/debian/ unstable/main libblas-dev ia64 1.2.20110419-2 [344 kB]
+Get:73 http://spohr.debian.org/debian/ unstable/main libbz2-dev ia64 1.0.6-1 [51.7 kB]
+Get:74 http://spohr.debian.org/debian/ unstable/main libjpeg8-dev ia64 8d-1 [355 kB]
+Get:75 http://spohr.debian.org/debian/ unstable/main liblapack3gf ia64 3.3.1-1 [7288 kB]
+Get:76 http://spohr.debian.org/debian/ unstable/main liblapack-dev ia64 3.3.1-1 [8033 kB]
+Get:77 http://spohr.debian.org/debian/ unstable/main libtinfo-dev ia64 5.9-6 [135 kB]
+Get:78 http://spohr.debian.org/debian/ unstable/main libncurses5-dev ia64 5.9-6 [480 kB]
+Get:79 http://spohr.debian.org/debian/ unstable/main libpaper1 ia64 1.1.24+nmu1 [22.9 kB]
+Get:80 http://spohr.debian.org/debian/ unstable/main libpaper-utils ia64 1.1.24+nmu1 [19.7 kB]
+Get:81 http://spohr.debian.org/debian/ unstable/main libpcre3-dev ia64 1:8.30-4 [405 kB]
+Get:82 http://spohr.debian.org/debian/ unstable/main zlib1g-dev ia64 1:1.2.6.dfsg-2 [251 kB]
+Get:83 http://spohr.debian.org/debian/ unstable/main libpng12-dev ia64 1.2.49-1 [305 kB]
+Get:84 http://spohr.debian.org/debian/ unstable/main libreadline6-dev ia64 6.2-8 [338 kB]
+Get:85 http://spohr.debian.org/debian/ unstable/main libreadline-dev ia64 6.2-8 [890 B]
+Get:86 http://spohr.debian.org/debian/ unstable/main zip ia64 3.0-4 [445 kB]
+Get:87 http://spohr.debian.org/debian/ unstable/main unzip ia64 6.0-6 [264 kB]
+Get:88 http://spohr.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:89 http://spohr.debian.org/debian/ unstable/main tcl8.5 ia64 8.5.11-1 [1908 kB]
+Get:90 http://spohr.debian.org/debian/ unstable/main tk8.5 ia64 8.5.11-1 [1518 kB]
+Get:91 http://spohr.debian.org/debian/ unstable/main r-base-core ia64 2.15.0-1 [21.6 MB]
+Get:92 http://spohr.debian.org/debian/ unstable/main r-base-dev all 2.15.0-1 [3900 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 21.4 MB in 1s (10.9 MB/s)
+Fetched 95.8 MB in 9s (10.6 MB/s)
+(Reading database ... 10668 files and directories currently installed.)
+Preparing to replace ncurses-bin 5.9-4 (using .../ncurses-bin_5.9-6_ia64.deb) ...
+Unpacking replacement ncurses-bin ...
+Setting up ncurses-bin (5.9-6) ...
+Selecting previously unselected package gcc-4.7-base.
+(Reading database ... 10668 files and directories currently installed.)
+Unpacking gcc-4.7-base (from .../gcc-4.7-base_4.7.0-3_ia64.deb) ...
+Setting up gcc-4.7-base (4.7.0-3) ...
+(Reading database ... 10676 files and directories currently installed.)
+Preparing to replace libgcc1 1:4.6.2-12 (using .../libgcc1_1%3a4.7.0-3_ia64.deb) ...
+Unpacking replacement libgcc1 ...
+Setting up libgcc1 (1:4.7.0-3) ...
+(Reading database ... 10676 files and directories currently installed.)
+Preparing to replace libstdc++6 4.6.2-12 (using .../libstdc++6_4.7.0-3_ia64.deb) ...
+Unpacking replacement libstdc++6 ...
+Setting up libstdc++6 (4.7.0-3) ...
+(Reading database ... 10676 files and directories currently installed.)
+Preparing to replace libtinfo5 5.9-4 (using .../libtinfo5_5.9-6_ia64.deb) ...
+Unpacking replacement libtinfo5 ...
+Setting up libtinfo5 (5.9-6) ...
+(Reading database ... 10676 files and directories currently installed.)
+Preparing to replace libncurses5 5.9-4 (using .../libncurses5_5.9-6_ia64.deb) ...
+Unpacking replacement libncurses5 ...
+Setting up libncurses5 (5.9-6) ...
+(Reading database ... 10676 files and directories currently installed.)
+Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.6.dfsg-2_ia64.deb) ...
+Unpacking replacement zlib1g ...
+Setting up zlib1g (1:1.2.6.dfsg-2) ...
Selecting previously unselected package libpipeline1.
-(Reading database ... 10622 files and directories currently installed.)
+(Reading database ... 10676 files and directories currently installed.)
Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_ia64.deb) ...
Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_ia64.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.11-1_ia64.deb) ...
Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-4_ia64.deb) ...
+Unpacking libpcre3 (from .../libpcre3_1%3a8.30-4_ia64.deb) ...
Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_ia64.deb) ...
+Unpacking libexpat1 (from .../libexpat1_2.1.0-1_ia64.deb) ...
Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_ia64.deb) ...
-Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu2_all.deb) ...
-Moving old data out of the way
+Unpacking libfreetype6 (from .../libfreetype6_2.4.9-1_ia64.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
@@ -623,41 +364,45 @@ Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_ia64.deb) ...
Selecting previously unselected package libpixman-1-0.
Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_ia64.deb) ...
Selecting previously unselected package libpng12-0.
-Unpacking libpng12-0 (from .../libpng12-0_1.2.47-1_ia64.deb) ...
+Unpacking libpng12-0 (from .../libpng12-0_1.2.49-1_ia64.deb) ...
Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_ia64.deb) ...
+Unpacking libxau6 (from .../libxau6_1%3a1.0.7-1_ia64.deb) ...
Selecting previously unselected package libxdmcp6.
Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_ia64.deb) ...
Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_ia64.deb) ...
+Unpacking libxcb1 (from .../libxcb1_1.8.1-1_ia64.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
Selecting previously unselected package libx11-6.
Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_ia64.deb) ...
Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_ia64.deb) ...
+Unpacking libxcb-render0 (from .../libxcb-render0_1.8.1-1_ia64.deb) ...
Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_ia64.deb) ...
+Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8.1-1_ia64.deb) ...
Selecting previously unselected package libxrender1.
Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_ia64.deb) ...
Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_ia64.deb) ...
+Unpacking libcairo2 (from .../libcairo2_1.12.0-2_ia64.deb) ...
Selecting previously unselected package libffi5.
Unpacking libffi5 (from .../libffi5_3.0.10-3_ia64.deb) ...
Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_ia64.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.32.0-4_ia64.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_ia64.deb) ...
Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_ia64.deb) ...
+Unpacking libcroco3 (from .../libcroco3_0.6.5-1_ia64.deb) ...
Selecting previously unselected package libdatrie1.
Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_ia64.deb) ...
+Preparing to replace libquadmath0 4.6.2-12 (using .../libquadmath0_4.7.0-3_ia64.deb) ...
+Unpacking replacement libquadmath0 ...
Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_ia64.deb) ...
+Unpacking libgfortran3 (from .../libgfortran3_4.7.0-3_ia64.deb) ...
+Preparing to replace libgomp1 4.6.2-12 (using .../libgomp1_4.7.0-3_ia64.deb) ...
+Unpacking replacement libgomp1 ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_ia64.deb) ...
+Unpacking libice6 (from .../libice6_2%3a1.0.8-2_ia64.deb) ...
Selecting previously unselected package libjpeg8.
Unpacking libjpeg8 (from .../libjpeg8_8d-1_ia64.deb) ...
Selecting previously unselected package libthai-data.
@@ -669,13 +414,13 @@ Unpacking libxft2 (from .../libxft2_2.2.0-3_ia64.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_ia64.deb) ...
Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_ia64.deb) ...
+Unpacking libpango1.0-0 (from .../libpango1.0-0_1.30.0-1_ia64.deb) ...
Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_ia64.deb) ...
+Unpacking libpcrecpp0 (from .../libpcrecpp0_1%3a8.30-4_ia64.deb) ...
Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_ia64.deb) ...
+Unpacking libsm6 (from .../libsm6_2%3a1.2.1-2_ia64.deb) ...
Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_ia64.deb) ...
+Unpacking libtiff4 (from .../libtiff4_3.9.6-2_ia64.deb) ...
Selecting previously unselected package libunistring0.
Unpacking libunistring0 (from .../libunistring0_0.9.3-5_ia64.deb) ...
Selecting previously unselected package libxext6.
@@ -687,15 +432,27 @@ Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_ia64.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_ia64.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6_ia64.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-7_ia64.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_ia64.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_ia64.deb) ...
+Preparing to replace g++-4.6 4.6.2-12 (using .../g++-4.6_4.6.3-3_ia64.deb) ...
+Unpacking replacement g++-4.6 ...
+Preparing to replace libstdc++6-4.6-dev 4.6.2-12 (using .../libstdc++6-4.6-dev_4.6.3-3_ia64.deb) ...
+Unpacking replacement libstdc++6-4.6-dev ...
+Preparing to replace gcc-4.6 4.6.2-12 (using .../gcc-4.6_4.6.3-3_ia64.deb) ...
+Unpacking replacement gcc-4.6 ...
+Preparing to replace cpp-4.6 4.6.2-12 (using .../cpp-4.6_4.6.3-3_ia64.deb) ...
+Unpacking replacement cpp-4.6 ...
+Preparing to replace gcc-4.6-base 4.6.2-12 (using .../gcc-4.6-base_4.6.3-3_ia64.deb) ...
+Unpacking replacement gcc-4.6-base ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.10-1_ia64.deb) ...
+Unpacking file (from .../archives/file_5.11-1_ia64.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_ia64.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
+Preparing to replace cpp 4:4.6.2-4 (using .../cpp_4%3a4.6.3-4_ia64.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_ia64.deb) ...
Selecting previously unselected package gettext.
@@ -705,13 +462,16 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
+Preparing to replace gcc 4:4.6.2-4 (using .../gcc_4%3a4.6.3-4_ia64.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_ia64.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-3_ia64.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_ia64.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_ia64.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_ia64.deb) ...
Selecting previously unselected package libblas-dev.
@@ -725,19 +485,19 @@ Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_ia64.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_ia64.deb) ...
Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_ia64.deb) ...
+Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-6_ia64.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_ia64.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_ia64.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_ia64.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_ia64.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_ia64.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_ia64.deb) ...
Selecting previously unselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_ia64.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_ia64.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_ia64.deb) ...
Selecting previously unselected package libreadline6-dev.
Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_ia64.deb) ...
Selecting previously unselected package libreadline-dev.
@@ -745,7 +505,7 @@ Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_ia64.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../archives/zip_3.0-4_ia64.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../archives/unzip_6.0-5_ia64.deb) ...
+Unpacking unzip (from .../archives/unzip_6.0-6_ia64.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -753,40 +513,41 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_ia64.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_ia64.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_ia64.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_ia64.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libpcre3 (8.12-4) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
-Setting up ucf (3.0025+nmu2) ...
+Setting up libmagic1 (5.11-1) ...
+Setting up libpcre3 (1:8.30-4) ...
+Setting up libexpat1 (2.1.0-1) ...
+Setting up libfreetype6 (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
Setting up libfontconfig1 (2.8.0-3.1) ...
Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libpng12-0 (1.2.47-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
+Setting up libpng12-0 (1.2.49-1) ...
+Setting up libxau6 (1:1.0.7-1) ...
Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libxcb1 (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
+Setting up libxcb-render0 (1.8.1-1) ...
+Setting up libxcb-shm0 (1.8.1-1) ...
Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
+Setting up libcairo2 (1.12.0-2) ...
Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libglib2.0-0 (2.32.0-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
+Setting up libcroco3 (0.6.5-1) ...
Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libquadmath0 (4.7.0-3) ...
+Setting up libgfortran3 (4.7.0-3) ...
+Setting up libgomp1 (4.7.0-3) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
+Setting up libice6 (2:1.0.8-2) ...
Setting up libjpeg8 (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
Setting up libthai0 (0.1.17-1) ...
@@ -794,10 +555,10 @@ Setting up libxft2 (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
+Setting up libpango1.0-0 (1.30.0-1) ...
+Setting up libpcrecpp0 (1:8.30-4) ...
+Setting up libsm6 (2:1.2.1-2) ...
+Setting up libtiff4 (3.9.6-2) ...
Setting up libunistring0 (0.9.3-5) ...
Setting up libxext6 (2:1.3.0-3) ...
Setting up libxss1 (1:1.2.1-2) ...
@@ -805,20 +566,25 @@ Setting up libxt6 (1:1.1.1-2) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.1-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up gcc-4.6-base (4.6.3-3) ...
+Setting up cpp-4.6 (4.6.3-3) ...
+Setting up gcc-4.6 (4.6.3-3) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
+Setting up cpp (4:4.6.3-4) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gcc (4:4.6.3-4) ...
+Setting up gfortran-4.6 (4.6.3-3) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
@@ -830,98 +596,43 @@ Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
+Setting up libpcre3-dev (1:8.30-4) ...
Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
+Setting up libpng12-dev (1.2.49-1) ...
Setting up libreadline6-dev (6.2-8) ...
Setting up libreadline-dev (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.0-1) ...
+Setting up g++-4.6 (4.6.3-3) ...
+Setting up libstdc++6-4.6-dev (4.6.3-3) ...
Removing negative dependencies:
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 40 not upgraded.
+The following packages were automatically installed and are no longer required:
+ libppl9 libpwl5 libppl-c4 libcloog-ppl0 libgmpxx4ldbl
+Use 'apt-get autoremove' to remove them.
+0 upgraded, 0 newly installed, 0 to remove and 55 not upgraded.
Checking correctness of dependencies...
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Kernel: Linux 2.6.32-bpo.5-mckinley ia64 (ia64)
-Toolchain package versions: binutils_2.22-4 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6.1-dev_2.13-26 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.1.1-1
-Package versions: apt_0.8.15.10 base-files_6.5 base-passwd_3.5.24 bash_4.1-3 binutils_2.22-4 bsdmainutils_9.0.1 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.0.4 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.1-1 file_5.10-1 findutils_4.4.2-1+b1 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-1 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-6 gzip_1.4-2 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.13 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-26 libc-dev-bin_2.13-26 libc6.1_2.13-26 libc6.1-dev_2.13-26 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.0.0-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-3 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libncurses5-dev_5.9-4 libpam-modules_1.1.3-6 libpam-modules-bin_1.1.3-6 libpam-runtime_1.1.3-6 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libquadmath0_4.6.3-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-2 libsepol1_2.1.4-1 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42-1 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libunistring0_0.9.3-5 libunwind7_0.99-0.3 libunwind7-dev_0.99-0.3 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.1.1-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 mount_2.19.1-5 multiarch-support_2.13-21 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p1-2 sysv-rc_2.88dsf-13.13 sysvinit_2.88dsf-13.13 sysvinit-utils_2.88dsf-13.13 tar_1.26-3 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.19.1-5 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: Linux 2.6.32-5-mckinley ia64 (ia64)
+Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6.1-dev_2.13-26 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.2-1
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-7 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-26 libc-dev-bin_2.13-26 libc6.1_2.13-26 libc6.1-dev_2.13-26 libcairo2_1.12.0-2 libclass-isa-perl_0.36-3 libcloog-ppl0_0.15.11-4 libcomerr2_1.42-1 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libgfortran3_4.7.0-3 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.3+dfsg-1 libgmpxx4ldbl_2:5.0.3+dfsg-1 libgomp1_4.7.0-3 libice6_2:1.0.8-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-6 libncurses5-dev_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libppl-c4_0.11.2-6 libppl9_0.11.2-6 libpwl5_0.11.2-6 libquadmath0_4.7.0-3 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-6 libsm6_2:1.2.1-2 libss2_1.42-1 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libunwind7_0.99-0.3 libunwind7-dev_0.99-0.3 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.2-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-26 ncurses-base_5.9-4 ncurses-bin_5.9-6 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-7 po-debconf_1.0.16+nmu2 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-1.2 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -931,43 +642,13 @@ Package versions: apt_0.8.15.10 base-files_6.5 base-passwd_3.5.24 bash_4.1-3 bin
Unpack source
─────────────
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -976,39 +657,9 @@ Check disc space
dpkg-buildpackage
─────────────────
-W: line 8 [lenny-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture ia64
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -1016,9 +667,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -1052,20 +703,20 @@ rm -f config.log config.status
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -1079,44 +730,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -1153,9 +804,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp/r-bioc-limma-3.10.3'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -1180,72 +831,67 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_ia64.deb'.
- dpkg-genchanges -B -mia64 Build Daemon (caballero) <buildd_ia64-caballero at buildd.debian.org> >../r-bioc-limma_3.10.3-1_ia64.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_ia64.deb'.
+ dpkg-genchanges -B -mia64 Build Daemon (alkman) <buildd_ia64-alkman at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_ia64.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0841
+Build finished at 20120412-0337
-r-bioc-limma_3.10.3-1_ia64.changes:
+r-bioc-limma_3.12.0~dfsg-1_ia64.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: ia64
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: ia64 Build Daemon (caballero) <buildd_ia64-caballero at buildd.debian.org>
+Maintainer: ia64 Build Daemon (alkman) <buildd_ia64-alkman at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 4282a891ca2fdcfc7a91ebe55ad477420b699671 1479082 r-bioc-limma_3.10.3-1_ia64.deb
+ 2c1a4e299f75711c8e664bfadf6125418a33e90e 813440 r-bioc-limma_3.12.0~dfsg-1_ia64.deb
Checksums-Sha256:
- 3b83c3ba71a0a3ef96a5d2f4c92f8cbb16edc7d5a412c1989bb3436f8409677b 1479082 r-bioc-limma_3.10.3-1_ia64.deb
+ da8371b861c45b6ca959309795b4c5a14303262adc1d23a6dab2eae0391d8ef5 813440 r-bioc-limma_3.12.0~dfsg-1_ia64.deb
Files:
- 8f117c737187c812d08e60af63605c6a 1479082 gnu-r optional r-bioc-limma_3.10.3-1_ia64.deb
+ 12f2fe29ecfa8d6b5ec43be4f2abf099 813440 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_ia64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_ia64.deb
-──────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_ia64.deb
+───────────────────────────────────
new debian package, version 2.0.
- size 1479082 bytes: control archive= 1573 bytes.
- 770 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 813440 bytes: control archive= 1539 bytes.
+ 774 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: ia64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1693
- Depends: libc6.1 (>= 2.2), r-base-core (>= 2.14.2-1)
+ Installed-Size: 935
+ Depends: libc6.1 (>= 2.2), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -1257,52 +903,51 @@ r-bioc-limma_3.10.3-1_ia64.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 1901 2012-03-07 08:41 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 969 2012-03-07 08:41 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 1054 2012-03-07 08:41 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6022 2012-03-07 08:41 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5603 2012-03-07 08:41 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 2886 2012-03-07 08:41 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 216 2012-03-07 08:41 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 518 2012-03-07 08:41 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 23480 2012-03-07 08:41 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 383 2012-03-07 08:41 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 198251 2012-03-07 08:41 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 3777 2012-03-07 08:41 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 89361 2012-03-07 08:41 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rwxr-xr-x root/root 673 2012-03-07 08:41 ./usr/lib/R/site-library/limma/doc/index.html
--rwxr-xr-x root/root 1711 2012-03-07 08:41 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 42743 2012-03-07 08:41 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 737677 2012-03-07 08:41 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rwxr-xr-x root/root 1230 2012-03-07 08:41 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 2173 2012-03-07 08:41 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1348 2012-03-07 08:41 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 458449 2012-03-07 08:41 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3268 2012-03-07 08:41 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6221 2012-03-07 08:41 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2392 2012-03-07 08:41 ./usr/lib/R/site-library/limma/help/aliases.rds
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 34556 2012-03-07 08:41 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2012-03-07 08:41 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 9458 2012-03-07 08:41 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 08:41 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2012-03-07 08:40 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2302 2012-03-07 08:40 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 560 2012-03-07 08:40 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 683 2012-04-12 03:37 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 27998 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 2457 2012-04-12 03:37 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 264 2012-04-12 03:37 ./usr/share/doc/r-bioc-limma/README.Debian
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 9754 2012-04-12 03:37 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2012-04-12 03:37 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 35015 2012-04-12 03:37 ./usr/lib/R/site-library/limma/html/00Index.html
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 2431 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 6317 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 3341 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 472501 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 1372 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 3989 2012-04-12 03:37 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rwxr-xr-x root/root 1230 2012-04-12 03:37 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 42743 2012-04-12 03:37 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 1711 2012-04-12 03:37 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rwxr-xr-x root/root 673 2012-04-12 03:37 ./usr/lib/R/site-library/limma/doc/index.html
+-rwxr-xr-x root/root 91993 2012-04-12 03:37 ./usr/lib/R/site-library/limma/doc/changelog.txt
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 3831 2012-04-12 03:37 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 202044 2012-04-12 03:37 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 383 2012-04-12 03:37 ./usr/lib/R/site-library/limma/R/limma
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 23480 2012-04-12 03:37 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 521 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 220 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 2943 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 5727 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 6157 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 1056 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 969 2012-04-12 03:37 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 1901 2012-04-12 03:37 ./usr/lib/R/site-library/limma/NAMESPACE
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1316,328 +961,27 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ia64-sbuild-04365a86-caef-4932-beb7-e49fc4803c1e/build/buildd-r-bioc-limma_3.10.3-1-ia64-DLnicp
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 40 not upgraded.
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages will be REMOVED:
- bsdmainutils* cdbs* debhelper* dpatch* file* fontconfig* fontconfig-config*
- gettext* gettext-base* gfortran* gfortran-4.6* groff-base* html2text*
- intltool-debian* libblas-dev* libblas3gf* libbz2-dev* libcairo2* libcroco3*
- libdatrie1* libexpat1* libffi5* libfontconfig1* libfreetype6* libgfortran3*
- libglib2.0-0* libice6* libjpeg8* libjpeg8-dev* liblapack-dev* liblapack3gf*
- libmagic1* libncurses5-dev* libpango1.0-0* libpaper-utils* libpaper1*
- libpcre3* libpcre3-dev* libpcrecpp0* libpipeline1* libpixman-1-0*
- libpng12-0* libpng12-dev* libreadline-dev* libreadline6-dev* libsm6*
- libthai-data* libthai0* libtiff4* libtinfo-dev* libunistring0* libx11-6*
- libx11-data* libxau6* libxcb-render0* libxcb-shm0* libxcb1* libxdmcp6*
- libxext6* libxft2* libxml2* libxrender1* libxss1* libxt6* man-db*
- po-debconf* r-base-core* r-base-dev* tcl8.5* tk8.5* ttf-dejavu-core* ucf*
- unzip* x11-common* xdg-utils* zip* zlib1g-dev*
-0 upgraded, 0 newly installed, 77 to remove and 40 not upgraded.
-After this operation, 182 MB disk space will be freed.
-(Reading database ... 14698 files and directories currently installed.)
-Removing debhelper ...
-Removing man-db ...
-Purging configuration files for man-db ...
-Removing bsdmainutils ...
-Purging configuration files for bsdmainutils ...
-Removing r-base-dev ...
-Removing cdbs ...
-Removing dpatch ...
-Purging configuration files for dpatch ...
-Removing file ...
-Removing r-base-core ...
-Purging configuration files for r-base-core ...
-Removing libpango1.0-0 ...
-Purging configuration files for libpango1.0-0 ...
-Removing fontconfig ...
-Purging configuration files for fontconfig ...
-Removing tk8.5 ...
-Purging configuration files for tk8.5 ...
-Removing libxft2 ...
-Purging configuration files for libxft2 ...
-Removing libcairo2 ...
-Purging configuration files for libcairo2 ...
-Removing libfontconfig1 ...
-Purging configuration files for libfontconfig1 ...
-Removing fontconfig-config ...
-Purging configuration files for fontconfig-config ...
-Removing po-debconf ...
-Removing intltool-debian ...
-Removing gettext ...
-Removing gettext-base ...
-Removing gfortran ...
-Removing gfortran-4.6 ...
-Removing groff-base ...
-Purging configuration files for groff-base ...
-Removing html2text ...
-Purging configuration files for html2text ...
-Removing liblapack-dev ...
-Removing libblas-dev ...
-Removing liblapack3gf ...
-Purging configuration files for liblapack3gf ...
-Removing libblas3gf ...
-Purging configuration files for libblas3gf ...
-Removing libbz2-dev ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libthai0 ...
-Purging configuration files for libthai0 ...
-Removing libdatrie1 ...
-Purging configuration files for libdatrie1 ...
-Removing libexpat1 ...
-Purging configuration files for libexpat1 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
-Removing libffi5 ...
-Purging configuration files for libffi5 ...
-Removing libfreetype6 ...
-Purging configuration files for libfreetype6 ...
-Removing libgfortran3 ...
-Purging configuration files for libgfortran3 ...
-Removing libxt6 ...
-Purging configuration files for libxt6 ...
-Removing libsm6 ...
-Purging configuration files for libsm6 ...
-Removing libice6 ...
-Purging configuration files for libice6 ...
-Removing libtiff4 ...
-Purging configuration files for libtiff4 ...
-Removing libjpeg8-dev ...
-Removing libjpeg8 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
-Removing libncurses5-dev ...
-Removing libpaper-utils ...
-Removing libpaper1 ...
-Purging configuration files for libpaper1 ...
-Removing libpcre3-dev ...
-Removing libpcrecpp0 ...
-Purging configuration files for libpcrecpp0 ...
-Removing libpcre3 ...
-Purging configuration files for libpcre3 ...
-Removing libpipeline1 ...
-Purging configuration files for libpipeline1 ...
-Removing libpixman-1-0 ...
-Purging configuration files for libpixman-1-0 ...
-Removing libpng12-dev ...
-Removing libpng12-0 ...
-Purging configuration files for libpng12-0 ...
-Removing libreadline-dev ...
-Removing libreadline6-dev ...
-Removing libthai-data ...
-Removing libtinfo-dev ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libxss1 ...
-Purging configuration files for libxss1 ...
-Removing libxrender1 ...
-Purging configuration files for libxrender1 ...
-Removing libxext6 ...
-Purging configuration files for libxext6 ...
-Removing libx11-6 ...
-Purging configuration files for libx11-6 ...
-Removing libx11-data ...
-Removing libxcb-shm0 ...
-Purging configuration files for libxcb-shm0 ...
-Removing libxcb-render0 ...
-Purging configuration files for libxcb-render0 ...
-Removing libxcb1 ...
-Purging configuration files for libxcb1 ...
-Removing libxau6 ...
-Purging configuration files for libxau6 ...
-Removing libxdmcp6 ...
-Purging configuration files for libxdmcp6 ...
-Removing libxml2 ...
-Purging configuration files for libxml2 ...
-Removing tcl8.5 ...
-Purging configuration files for tcl8.5 ...
-Removing ttf-dejavu-core ...
-Removing ucf ...
-Purging configuration files for ucf ...
-Removing unzip ...
-Purging configuration files for unzip ...
-Removing x11-common ...
-All runlevel operations denied by policy
-invoke-rc.d: policy-rc.d denied execution of stop.
-Purging configuration files for x11-common ...
-dpkg: warning: while removing x11-common, directory '/etc/X11' not empty so not removed.
-Removing xdg-utils ...
-Removing zip ...
-Removing zlib1g-dev ...
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-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-ia64-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-ia64-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-ia64-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
+Purging /var/lib/schroot/mount/sid-ia64-sbuild-6390737b-2e8d-4b1f-b1b0-d205821cc1f1/build/buildd-r-bioc-limma_3.12.0~dfsg-1-ia64-YAaaWR
+Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: ia64
-Build-Space: 5352
-Build-Time: 41
+Build-Space: 5952
+Build-Time: 42
Distribution: sid
-Install-Time: 62
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 237
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 120
-Source-Version: 3.10.3-1
-Space: 5352
+Package-Time: 343
+Source-Version: 3.12.0~dfsg-1
+Space: 5952
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0841
-Build needed 00:02:00, 5352k disc space
+Finished at 20120412-0337
+Build needed 00:05:43, 5952k disc space
+Signature with key '94AE7BC0' requested:
diff --git a/info b/info
index e534743..fc398c5 100644
--- a/info
+++ b/info
@@ -1,13 +1,17 @@
-powerpc~1331095611~sid~successful
-i386~1331095621~sid~successful
-s390~1331095732~sid~successful
-kfreebsd-i386~1331095817~sid~successful
-s390x~1331095853~sid~successful
-sparc~1331096389~sid~successful
-armel~1331096691~sid~successful
-kfreebsd-amd64~1331096951~sid~successful
-mips~1331097741~sid~successful
-mipsel~1331100454~sid~successful
-armhf~1331100759~sid~successful
-hurd-i386~1331103281~sid~successful
-ia64~1331109721~sid~successful
+i386~1334201561~sid~successful
+s390~1334201574~sid~successful
+s390x~1334201663~sid~successful
+powerpc~1334201744~sid~successful
+ia64~1334201885~sid~successful
+sparc~1334201893~sid~successful
+armhf~1334202094~sid~failed
+kfreebsd-i386~1334204030~sid~successful
+mips~1334206907~sid~successful
+mipsel~1334207377~sid~successful
+hurd-i386~1334208640~sid~successful
+armel~1334209262~sid~failed
+kfreebsd-amd64~1334211610~sid~successful
+armhf~1342353733~sid~failed
+armel~1342377832~sid~failed
+armhf~1342798053~sid~successful
+armel~1342799489~sid~successful
diff --git a/kfreebsd-amd64.log b/kfreebsd-amd64.log
index 58f78c4..fb1b2cf 100644
--- a/kfreebsd-amd64.log
+++ b/kfreebsd-amd64.log
@@ -1,47 +1,61 @@
-From buildd at fano.debian.org Wed Mar 07 05:09:11 2012
-Return-path: <buildd at fano.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
+From buildd at fasch.debian.org Thu Apr 12 06:20:09 2012
+Return-path: <buildd at fasch.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at fano.debian.org>)
- id 1S597f-0008Em-4r
- for logs at buildd.debian.org; Wed, 07 Mar 2012 05:09:11 +0000
-Received: from fano.debian.org ([206.12.19.110])
+ (Exim 4.72) (envelope-from <buildd at fasch.debian.org>)
+ id 1SIDO5-0000v3-KL
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 06:20:09 +0000
+Received: from fasch.debian.org ([194.177.211.201])
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- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at fano.debian.org>)
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-Message-Id: <E1S597b-000Moi-Oy at fano.debian.org>
+ CN=fasch.debian.org, EMAIL=hostmaster at fasch.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at fasch.debian.org>)
+ id 1SIDO4-0001sc-NC; Thu, 12 Apr 2012 06:20:08 +0000
+Received: from buildd by fasch.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at fasch.debian.org>)
+ id 1SIDO3-000GZt-UK; Thu, 12 Apr 2012 06:20:07 +0000
+Message-Id: <E1SIDO3-000GZt-UK at fasch.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 7 Mar 2012 05:09:07 +0000
-From: buildd on fano <buildd at fano.debian.org>
+Date: Thu, 12 Apr 2012 06:20:07 +0000
+From: buildd on fasch <buildd at fasch.debian.org>
To: logs at buildd.debian.org,aurelien at aurel32.net,christoph at debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on kfreebsd-amd64
- (dist=sid)
-Key-Id: B22267E5
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on
+ kfreebsd-amd64 (dist=sid)
+Key-Id: 94C0145B
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on fano.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on fasch.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (kfreebsd-amd64) 07 Mar 2012 05:00 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (kfreebsd-amd64) 12 Apr 2012 06:13 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: kfreebsd-amd64
+Hit http://ftp.gr.debian.org sid InRelease
+Hit http://ftp.gr.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Get:1 http://incoming.debian.org Release.gpg [836 B]
+Hit http://ftp.gr.debian.org sid/contrib Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid/main kfreebsd-amd64 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/contrib kfreebsd-amd64 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
+Ign http://ftp.gr.debian.org sid/contrib TranslationIndex
+Hit http://ftp.gr.debian.org sid/main TranslationIndex
+Ign http://ftp.gr.debian.org sid/non-free TranslationIndex
+Hit http://incoming.debian.org Release.gpg
+Hit http://ftp.gr.debian.org sid/non-free kfreebsd-amd64 Packages
+Hit http://ftp.gr.debian.org sid/contrib Translation-en
+Hit http://ftp.gr.debian.org sid/main Translation-en
+Hit http://ftp.gr.debian.org sid/non-free Translation-en
Hit http://incoming.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
Hit http://incoming.debian.org sid/non-free Sources/DiffIndex
@@ -51,35 +65,14 @@ Hit http://incoming.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
Ign http://incoming.debian.org sid/contrib TranslationIndex
Hit http://incoming.debian.org sid/main TranslationIndex
Ign http://incoming.debian.org sid/non-free TranslationIndex
-Get:2 http://mirror-ubc.debian.org sid InRelease [197 kB]
-Get:3 http://incoming.debian.org Release [1616 B]
+Hit http://incoming.debian.org Release
Hit http://incoming.debian.org sid/non-free kfreebsd-amd64 Packages
Hit http://incoming.debian.org sid/contrib Translation-en
Hit http://incoming.debian.org sid/main Translation-en
Hit http://incoming.debian.org sid/non-free Translation-en
-Get:4 http://mirror-ubc.debian.org sid/main Sources/DiffIndex [4123 B]
-Get:5 http://incoming.debian.org Sources [63.4 kB]
-Get:6 http://incoming.debian.org Packages [849 kB]
-Hit http://mirror-ubc.debian.org sid/contrib Sources/DiffIndex
-Get:7 http://mirror-ubc.debian.org sid/non-free Sources/DiffIndex [2851 B]
-Get:8 http://mirror-ubc.debian.org sid/main kfreebsd-amd64 Packages/DiffIndex [4123 B]
-Hit http://mirror-ubc.debian.org sid/contrib kfreebsd-amd64 Packages/DiffIndex
-Hit http://mirror-ubc.debian.org sid/non-free kfreebsd-amd64 Packages/DiffIndex
-Ign http://mirror-ubc.debian.org sid/contrib TranslationIndex
-Get:9 http://mirror-ubc.debian.org sid/main TranslationIndex [2154 B]
-Ign http://mirror-ubc.debian.org sid/non-free TranslationIndex
-Get:10 http://mirror-ubc.debian.org sid/main 2012-03-07-0216.29.pdiff [16.4 kB]
-Get:11 http://mirror-ubc.debian.org sid/main 2012-03-07-0216.29.pdiff [16.4 kB]
-Get:12 http://mirror-ubc.debian.org sid/non-free 2012-03-07-0216.29.pdiff [831 B]
-Get:13 http://mirror-ubc.debian.org sid/main kfreebsd-amd64 2012-03-07-0216.29.pdiff [24.1 kB]
+Hit http://incoming.debian.org Sources
+Hit http://incoming.debian.org Packages
Ign http://incoming.debian.org Translation-en
-Get:14 http://mirror-ubc.debian.org sid/non-free kfreebsd-amd64 Packages [55.4 kB]
-Get:15 http://mirror-ubc.debian.org sid/contrib Translation-en [37.1 kB]
-Get:16 http://mirror-ubc.debian.org sid/main Translation-en [3906 kB]
-Get:17 http://mirror-ubc.debian.org sid/non-free Translation-en [69.7 kB]
-Get:18 http://mirror-ubc.debian.org sid/non-free 2012-03-07-0216.29.pdiff [831 B]
-Get:19 http://mirror-ubc.debian.org sid/main kfreebsd-amd64 2012-03-07-0216.29.pdiff [24.1 kB]
-Fetched 5235 kB in 31s (164 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -100,11 +93,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 1s (663 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 1s (181 kB/s)
Download complete and in download only mode
Check arch
@@ -124,12 +117,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -141,37 +134,37 @@ Checking for already installed dependencies...
base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-1)
-coreutils: already installed (8.13-3)
+coreutils: already installed (8.13-3.1)
dash: already installed (0.5.7-3)
-debianutils: already installed (4.2.1)
+debianutils: already installed (4.2.2)
diffutils: already installed (1:3.2-2)
-dpkg: already installed (1.16.1.2)
-e2fsprogs: already installed (1.42.1-2)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-1)
findutils: already installed (4.4.2-4)
-freebsd-utils: already installed (9.0-2)
+freebsd-utils: already installed (9.0+ds1-1)
grep: already installed (2.10-1)
-gzip: already installed (1.4-3)
+gzip: already installed (1.4-5)
hostname: already installed (3.11)
ncurses-base: already installed (5.9-4)
-ncurses-bin: already installed (5.9-4)
+ncurses-bin: already installed (5.9-6)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
-sysvinit-utils: already installed (2.88dsf-22)
-sysvinit: already installed (2.88dsf-22)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
util-linux: already installed (2.20.1-4)
libc6-dev: already installed (~*=PROVIDED=*=)
-gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
@@ -179,34 +172,34 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
dpatch file fontconfig fontconfig-config gettext gettext-base gfortran
- gfortran-4.6 html2text intltool-debian libblas-dev libblas3gf libbz2-dev
- libcairo2 libcroco3 libdatrie1 libffi5 libfontconfig1 libfreetype6
- libgfortran3 libglib2.0-0 libice6 libjpeg8 libjpeg8-dev liblapack-dev
- liblapack3gf libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils
- libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4
- libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
- libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
- libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip
- x11-common xdg-utils zip zlib1g-dev
+ gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf
+ libbz2-dev libcairo2 libcroco3 libdatrie1 libffi5 libfontconfig1
+ libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0
+ libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
+ libtiff4 libtinfo-dev libunistring0 libx11-6 libx11-data libxau6
+ libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
+ libxrender1 libxss1 libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5
+ ttf-dejavu-core unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
devscripts dh-make curl defoma gettext-doc gfortran-multilib gfortran-doc
- gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg ncurses-doc
+ gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp groff less www-browser libmail-box-perl r-doc-info
- r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ ttf-arphic-bkai00mp less www-browser libmail-box-perl r-doc-info r-doc-pdf
+ r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
- libx11-protocol-perl x11-utils x11-xserver-utils
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl r-recommended r-doc-html xterm x-terminal-emulator
+ libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
+ x11-xserver-utils
The following NEW packages will be installed:
cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 html2text intltool-debian libblas-dev libblas3gf
- libbz2-dev libcairo2 libcroco3 libdatrie1 libffi5 libfontconfig1
+ gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
+ libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libffi5 libfontconfig1
libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8 libjpeg8-dev
liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0
libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
@@ -215,96 +208,95 @@ The following NEW packages will be installed:
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxrender1 libxss1 libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5
tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip zlib1g-dev
-0 upgraded, 71 newly installed, 0 to remove and 0 not upgraded.
-Need to get 20.3 MB/56.8 MB of archives.
-After this operation, 119 MB of additional disk space will be used.
-Get:1 http://mirror-ubc.debian.org/debian/ sid/main r-base-core kfreebsd-amd64 2.14.2-1 [20.3 MB]
-Get:2 http://mirror-ubc.debian.org/debian/ sid/main r-base-dev all 2.14.2-1 [3894 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 20.3 MB in 16s (1257 kB/s)
-Selecting previously unselected package libpipeline1.
-(Reading database ... 11910 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_kfreebsd-amd64.deb) ...
+0 upgraded, 72 newly installed, 0 to remove and 10 not upgraded.
+Need to get 0 B/58.5 MB of archives.
+After this operation, 122 MB of additional disk space will be used.
+Selecting previously unselected package libpipeline1:kfreebsd-amd64.
+(Reading database ... 11566 files and directories currently installed.)
+Unpacking libpipeline1:kfreebsd-amd64 (from .../libpipeline1_1.2.1-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libmagic1:kfreebsd-amd64.
+Unpacking libmagic1:kfreebsd-amd64 (from .../libmagic1_5.11-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libfreetype6:kfreebsd-amd64.
+Unpacking libfreetype6:kfreebsd-amd64 (from .../libfreetype6_2.4.9-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3.1_all.deb) ...
-Selecting previously unselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libpixman-1-0.
-Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libfontconfig1:kfreebsd-amd64.
+Unpacking libfontconfig1:kfreebsd-amd64 (from .../libfontconfig1_2.8.0-3.1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libpixman-1-0:kfreebsd-amd64.
+Unpacking libpixman-1-0:kfreebsd-amd64 (from .../libpixman-1-0_0.24.4-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxau6:kfreebsd-amd64.
+Unpacking libxau6:kfreebsd-amd64 (from .../libxau6_1%3a1.0.7-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxdmcp6:kfreebsd-amd64.
+Unpacking libxdmcp6:kfreebsd-amd64 (from .../libxdmcp6_1%3a1.1.0-4_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxcb1:kfreebsd-amd64.
+Unpacking libxcb1:kfreebsd-amd64 (from .../libxcb1_1.8.1-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
-Selecting previously unselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxrender1.
-Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libffi5.
-Unpacking libffi5 (from .../libffi5_3.0.10-3_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libx11-6:kfreebsd-amd64.
+Unpacking libx11-6:kfreebsd-amd64 (from .../libx11-6_2%3a1.4.4-4_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxcb-render0:kfreebsd-amd64.
+Unpacking libxcb-render0:kfreebsd-amd64 (from .../libxcb-render0_1.8.1-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxcb-shm0:kfreebsd-amd64.
+Unpacking libxcb-shm0:kfreebsd-amd64 (from .../libxcb-shm0_1.8.1-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxrender1:kfreebsd-amd64.
+Unpacking libxrender1:kfreebsd-amd64 (from .../libxrender1_1%3a0.9.6-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libcairo2:kfreebsd-amd64.
+Unpacking libcairo2:kfreebsd-amd64 (from .../libcairo2_1.12.0-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libffi5:kfreebsd-amd64.
+Unpacking libffi5:kfreebsd-amd64 (from .../libffi5_3.0.10-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libglib2.0-0:kfreebsd-amd64.
+Unpacking libglib2.0-0:kfreebsd-amd64 (from .../libglib2.0-0_2.32.0-4_kfreebsd-amd64.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libdatrie1.
-Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libcroco3:kfreebsd-amd64.
+Unpacking libcroco3:kfreebsd-amd64 (from .../libcroco3_0.6.5-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libdatrie1:kfreebsd-amd64.
+Unpacking libdatrie1:kfreebsd-amd64 (from .../libdatrie1_0.2.5-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libgfortran3:kfreebsd-amd64.
+Unpacking libgfortran3:kfreebsd-amd64 (from .../libgfortran3_4.7.0-3_kfreebsd-amd64.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
-Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libjpeg8.
-Unpacking libjpeg8 (from .../libjpeg8_8d-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libice6:kfreebsd-amd64.
+Unpacking libice6:kfreebsd-amd64 (from .../libice6_2%3a1.0.8-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libjpeg8:kfreebsd-amd64.
+Unpacking libjpeg8:kfreebsd-amd64 (from .../libjpeg8_8d-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.17-1_all.deb) ...
-Selecting previously unselected package libthai0.
-Unpacking libthai0 (from .../libthai0_0.1.17-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxft2.
-Unpacking libxft2 (from .../libxft2_2.2.0-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libthai0:kfreebsd-amd64.
+Unpacking libthai0:kfreebsd-amd64 (from .../libthai0_0.1.17-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxft2:kfreebsd-amd64.
+Unpacking libxft2:kfreebsd-amd64 (from .../libxft2_2.2.0-3_kfreebsd-amd64.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-5_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxext6.
-Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxss1.
-Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxt6.
-Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libpango1.0-0:kfreebsd-amd64.
+Unpacking libpango1.0-0:kfreebsd-amd64 (from .../libpango1.0-0_1.30.0-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libpcrecpp0:kfreebsd-amd64.
+Unpacking libpcrecpp0:kfreebsd-amd64 (from .../libpcrecpp0_1%3a8.30-4_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libsm6:kfreebsd-amd64.
+Unpacking libsm6:kfreebsd-amd64 (from .../libsm6_2%3a1.2.1-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libtiff4:kfreebsd-amd64.
+Unpacking libtiff4:kfreebsd-amd64 (from .../libtiff4_3.9.6-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libunistring0:kfreebsd-amd64.
+Unpacking libunistring0:kfreebsd-amd64 (from .../libunistring0_0.9.3-5_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxext6:kfreebsd-amd64.
+Unpacking libxext6:kfreebsd-amd64 (from .../libxext6_2%3a1.3.0-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxss1:kfreebsd-amd64.
+Unpacking libxss1:kfreebsd-amd64 (from .../libxss1_1%3a1.2.1-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxt6:kfreebsd-amd64.
+Unpacking libxt6:kfreebsd-amd64 (from .../libxt6_1%3a1.1.1-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_kfreebsd-amd64.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_kfreebsd-amd64.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_5.10-1_kfreebsd-amd64.deb) ...
+Unpacking file (from .../file_5.11-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_kfreebsd-amd64.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_kfreebsd-amd64.deb) ...
Selecting previously unselected package gettext.
@@ -314,47 +306,47 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
Selecting previously unselected package gfortran-4.6.
Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_kfreebsd-amd64.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_kfreebsd-amd64.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package libblas-dev.
Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libbz2-dev.
-Unpacking libbz2-dev (from .../libbz2-dev_1.0.6-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libjpeg8-dev.
-Unpacking libjpeg8-dev (from .../libjpeg8-dev_8d-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libbz2-dev:kfreebsd-amd64.
+Unpacking libbz2-dev:kfreebsd-amd64 (from .../libbz2-dev_1.0.6-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libjpeg8-dev:kfreebsd-amd64.
+Unpacking libjpeg8-dev:kfreebsd-amd64 (from .../libjpeg8-dev_8d-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package liblapack3gf.
Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libtinfo-dev:kfreebsd-amd64.
+Unpacking libtinfo-dev:kfreebsd-amd64 (from .../libtinfo-dev_5.9-6_kfreebsd-amd64.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_kfreebsd-amd64.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_kfreebsd-amd64.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_kfreebsd-amd64.deb) ...
+Selecting previously unselected package zlib1g-dev:kfreebsd-amd64.
+Unpacking zlib1g-dev:kfreebsd-amd64 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libreadline6-dev.
-Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_kfreebsd-amd64.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libreadline6-dev:kfreebsd-amd64.
+Unpacking libreadline6-dev:kfreebsd-amd64 (from .../libreadline6-dev_6.2-8_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libreadline-dev:kfreebsd-amd64.
+Unpacking libreadline-dev:kfreebsd-amd64 (from .../libreadline-dev_6.2-8_kfreebsd-amd64.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../zip_3.0-4_kfreebsd-amd64.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../unzip_6.0-5_kfreebsd-amd64.deb) ...
+Unpacking unzip (from .../unzip_6.0-6_kfreebsd-amd64.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -362,107 +354,108 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_kfreebsd-amd64.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
+Setting up libpipeline1:kfreebsd-amd64 (1.2.1-1) ...
+Setting up libmagic1:kfreebsd-amd64 (5.11-1) ...
+Setting up libfreetype6:kfreebsd-amd64 (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
-Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libfontconfig1:kfreebsd-amd64 (2.8.0-3.1) ...
+Setting up libpixman-1-0:kfreebsd-amd64 (0.24.4-1) ...
+Setting up libxau6:kfreebsd-amd64 (1:1.0.7-1) ...
+Setting up libxdmcp6:kfreebsd-amd64 (1:1.1.0-4) ...
+Setting up libxcb1:kfreebsd-amd64 (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libx11-6:kfreebsd-amd64 (2:1.4.4-4) ...
+Setting up libxcb-render0:kfreebsd-amd64 (1.8.1-1) ...
+Setting up libxcb-shm0:kfreebsd-amd64 (1.8.1-1) ...
+Setting up libxrender1:kfreebsd-amd64 (1:0.9.6-2) ...
+Setting up libcairo2:kfreebsd-amd64 (1.12.0-2) ...
+Setting up libffi5:kfreebsd-amd64 (3.0.10-3) ...
+Setting up libglib2.0-0:kfreebsd-amd64 (2.32.0-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libcroco3:kfreebsd-amd64 (0.6.5-1) ...
+Setting up libdatrie1:kfreebsd-amd64 (0.2.5-3) ...
+Setting up libgfortran3:kfreebsd-amd64 (4.7.0-3) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
-Setting up libjpeg8 (8d-1) ...
+Setting up libice6:kfreebsd-amd64 (2:1.0.8-2) ...
+Setting up libjpeg8:kfreebsd-amd64 (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3) ...
+Setting up libthai0:kfreebsd-amd64 (0.1.17-1) ...
+Setting up libxft2:kfreebsd-amd64 (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5) ...
-Setting up libxext6 (2:1.3.0-3) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2) ...
-Setting up man-db (2.6.1-1) ...
+Setting up libpango1.0-0:kfreebsd-amd64 (1.30.0-1) ...
+Setting up libpcrecpp0:kfreebsd-amd64 (1:8.30-4) ...
+Setting up libsm6:kfreebsd-amd64 (2:1.2.1-2) ...
+Setting up libtiff4:kfreebsd-amd64 (3.9.6-2) ...
+Setting up libunistring0:kfreebsd-amd64 (0.9.3-5) ...
+Setting up libxext6:kfreebsd-amd64 (2:1.3.0-3) ...
+Setting up libxss1:kfreebsd-amd64 (1:1.2.1-2) ...
+Setting up libxt6:kfreebsd-amd64 (1:1.1.1-2) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
Setting up libblas-dev (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
+Setting up libbz2-dev:kfreebsd-amd64 (1.0.6-1) ...
+Setting up libjpeg8-dev:kfreebsd-amd64 (8d-1) ...
Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev:kfreebsd-amd64 (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8) ...
-Setting up libreadline-dev (6.2-8) ...
+Setting up libpcre3-dev (1:8.30-4) ...
+Setting up zlib1g-dev:kfreebsd-amd64 (1:1.2.6.dfsg-2) ...
+Setting up libpng12-dev (1.2.49-1) ...
+Setting up libreadline6-dev:kfreebsd-amd64 (6.2-8) ...
+Setting up libreadline-dev:kfreebsd-amd64 (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.0-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
Checking correctness of dependencies...
Kernel: GNU/kFreeBSD 8.1-1-amd64 kfreebsd-amd64 (x86_64)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 kfreebsd-kernel-headers_0.77 libc0.1-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1
-Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpio_2.11-7 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 freebsd-utils_9.0-2 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.2-base_4.2.4-6 gcc-4.4-base_4.4.6-14 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-3 gpgv_1.4.12-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-3 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 kbdcontrol_9.0-2 kfreebsd-kernel-headers_0.77 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc0.1_2.13-27 libc0.1-dev_2.13-27 libcairo2_1.10.2-7 libcam6_9.0+ds1-1 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgcrypt11_1.5.0-3 libgdbm3_1.8.3-10 libgeom1_9.0+ds1-1 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgnutls26_2.12.16-1 libgomp1_4.6.3-1 libgpg-error0_1.10-3 libgssglue1_0.3-4 libice6_2:1.0.7-2 libjail1_9.0+ds1-1 libjpeg8_8d-1 libjpeg8-dev_8d-1 libkiconv4_9.0+ds1-1 libkvm0_9.0+ds1-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 libldap-2.4-2_2.4.28-1.1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libncurses5-dev_5.9-4 libncursesw5_5.9-4 libp11-kit0_0.11-3 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libprocps0_1:3.3.2-3 libquadmath0_4.6.3-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libsasl2-2_2.1.25.dfsg1-4 libsbuf6_9.0+ds1-1 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42.1-2 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtasn1-3_2.11-1 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libtirpc1_0.2.2-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 login_1:4.1.5-1 lsb-base_3.2+Debian30 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-4 netbase_4.47 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 psmisc_22.16-1 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 type-handling_0.2.23 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 kfreebsd-kernel-headers_0.78 libc0.1-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.2.2 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 freebsd-utils_9.0+ds1-1 g++_4:4.6.3-4 g++-4.6_4.6.3-1 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 kbdcontrol_9.0+ds1-1 kfreebsd-kernel-headers_0.78 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc0.1_2.13-27 libc0.1-dev_2.13-27 libcairo2_1.12.0-2 libcam6_9.0+ds1-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libgeom1_9.0+ds1-2 libgfortran3_4.7.0-3 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 libgssglue1_0.3-4 libice6_2:1.0.8-2 libjail1_9.0+ds1-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 libkiconv4_9.0+ds1-2 libkvm0_9.0+ds1-2 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncurses5-dev_5.9-6 libncursesw5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libprocps0_1:3.3.2-3 libquadmath0_4.7.0-3 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libsbuf6_9.0+ds1-2 libslang2_2.2.4-8 libsm6_2:1.2.1-2 libss2_1.42.1-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libtirpc1_0.2.2-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 type-handling_0.2.23 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -473,12 +466,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -488,18 +481,18 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture kfreebsd-amd64
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
-/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) insteadmake[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3'
-
+/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -528,25 +521,25 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build
+ debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
-/usr/share/cdbs/1/rules/simple-patchsys.mk:31: make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3'
-WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -560,44 +553,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -636,7 +629,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -661,72 +654,67 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_kfreebsd-amd64.deb'.
- dpkg-genchanges -B -mkfreebsd-amd64 Build Daemon (fano) <buildd_kfreebsd-amd64-fano at buildd.debian.org> >../r-bioc-limma_3.10.3-1_kfreebsd-amd64.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_kfreebsd-amd64.deb'.
+ dpkg-genchanges -B -mkfreebsd-amd64 Build Daemon (fasch) <buildd_kfreebsd-amd64-fasch at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_kfreebsd-amd64.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0507
+Build finished at 20120412-0618
-r-bioc-limma_3.10.3-1_kfreebsd-amd64.changes:
+r-bioc-limma_3.12.0~dfsg-1_kfreebsd-amd64.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: kfreebsd-amd64
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: kfreebsd-amd64 Build Daemon (fano) <buildd_kfreebsd-amd64-fano at buildd.debian.org>
+Maintainer: kfreebsd-amd64 Build Daemon (fasch) <buildd_kfreebsd-amd64-fasch at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 6717fb132020393b8251744a8d915054bbb13049 1477774 r-bioc-limma_3.10.3-1_kfreebsd-amd64.deb
+ 45199b85fb8720ea8e122366c956deb736ca71f6 808554 r-bioc-limma_3.12.0~dfsg-1_kfreebsd-amd64.deb
Checksums-Sha256:
- 67225fa743e1e8406622b9eda57b9e1a1359a8f065a803b22becda90f87ae6bb 1477774 r-bioc-limma_3.10.3-1_kfreebsd-amd64.deb
+ 0da194863792733acc6904e0635959e6f7a6cb6f3dd5d932e3469e88e0a18cf9 808554 r-bioc-limma_3.12.0~dfsg-1_kfreebsd-amd64.deb
Files:
- a45350e81719b590fdf1b1ebf760c681 1477774 gnu-r optional r-bioc-limma_3.10.3-1_kfreebsd-amd64.deb
+ 487d77cb31f75bab5065e4d984104b9a 808554 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_kfreebsd-amd64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_kfreebsd-amd64.deb
-────────────────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_kfreebsd-amd64.deb
+─────────────────────────────────────────────
new debian package, version 2.0.
- size 1477774 bytes: control archive= 1574 bytes.
- 780 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 808554 bytes: control archive= 1548 bytes.
+ 784 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: kfreebsd-amd64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1627
- Depends: libc0.1 (>= 2.3), r-base-core (>= 2.14.2-1)
+ Installed-Size: 931
+ Depends: libc0.1 (>= 2.3), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -738,52 +726,51 @@ r-bioc-limma_3.10.3-1_kfreebsd-amd64.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 1901 2012-03-07 05:07 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 969 2012-03-07 05:07 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 1057 2012-03-07 05:07 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6022 2012-03-07 05:07 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5603 2012-03-07 05:07 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 2886 2012-03-07 05:07 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 216 2012-03-07 05:07 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 518 2012-03-07 05:07 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10904 2012-03-07 05:07 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 383 2012-03-07 05:07 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 198264 2012-03-07 05:07 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 3774 2012-03-07 05:07 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 89361 2012-03-07 05:07 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rwxr-xr-x root/root 673 2012-03-07 05:07 ./usr/lib/R/site-library/limma/doc/index.html
--rwxr-xr-x root/root 1711 2012-03-07 05:07 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 42743 2012-03-07 05:07 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 737677 2012-03-07 05:07 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rwxr-xr-x root/root 1230 2012-03-07 05:07 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 2173 2012-03-07 05:07 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1337 2012-03-07 05:07 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 460904 2012-03-07 05:07 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3271 2012-03-07 05:07 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6221 2012-03-07 05:07 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2392 2012-03-07 05:07 ./usr/lib/R/site-library/limma/help/aliases.rds
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 34556 2012-03-07 05:07 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2012-03-07 05:07 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 9458 2012-03-07 05:07 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 05:07 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2012-03-07 05:07 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2302 2012-03-07 05:07 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 560 2012-03-07 05:07 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 1901 2012-04-12 06:17 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 969 2012-04-12 06:17 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 1058 2012-04-12 06:17 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 6157 2012-04-12 06:17 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5727 2012-04-12 06:17 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 2943 2012-04-12 06:17 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 220 2012-04-12 06:17 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 521 2012-04-12 06:17 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 10904 2012-04-12 06:17 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 383 2012-04-12 06:17 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 202053 2012-04-12 06:17 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 3826 2012-04-12 06:17 ./usr/lib/R/site-library/limma/R/limma.rdx
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 91993 2012-04-12 06:17 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rwxr-xr-x root/root 673 2012-04-12 06:17 ./usr/lib/R/site-library/limma/doc/index.html
+-rwxr-xr-x root/root 1711 2012-04-12 06:17 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 42743 2012-04-12 06:17 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 1230 2012-04-12 06:17 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 3989 2012-04-12 06:17 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1389 2012-04-12 06:17 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 474660 2012-04-12 06:17 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3359 2012-04-12 06:17 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 6317 2012-04-12 06:17 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 2431 2012-04-12 06:17 ./usr/lib/R/site-library/limma/help/aliases.rds
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 35015 2012-04-12 06:17 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2012-04-12 06:17 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 9754 2012-04-12 06:17 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 06:17 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 264 2012-04-12 06:17 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 2457 2012-04-12 06:17 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 27996 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 683 2012-04-12 06:17 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -797,30 +784,30 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ka-sbuild-1331096442-84873/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-amd64-UO3AMY
+Purging /var/lib/schroot/mount/sid-ka-sbuild-1334211213-59938/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-amd64-kl0wMV
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following packages will be REMOVED:
cdbs* debhelper* dpatch* file* fontconfig* fontconfig-config* gettext*
- gettext-base* gfortran* gfortran-4.6* html2text* intltool-debian*
- libblas-dev* libblas3gf* libbz2-dev* libcairo2* libcroco3* libdatrie1*
- libffi5* libfontconfig1* libfreetype6* libgfortran3* libglib2.0-0* libice6*
- libjpeg8* libjpeg8-dev* liblapack-dev* liblapack3gf* libmagic1*
- libncurses5-dev* libpango1.0-0* libpaper-utils* libpaper1* libpcre3-dev*
- libpcrecpp0* libpipeline1* libpixman-1-0* libpng12-dev* libreadline-dev*
- libreadline6-dev* libsm6* libthai-data* libthai0* libtiff4* libtinfo-dev*
- libunistring0* libx11-6* libx11-data* libxau6* libxcb-render0* libxcb-shm0*
- libxcb1* libxdmcp6* libxext6* libxft2* libxml2* libxrender1* libxss1*
- libxt6* man-db* po-debconf* r-base-core* r-base-dev* tcl8.5* tk8.5*
+ gettext-base* gfortran* gfortran-4.6* groff-base* html2text*
+ intltool-debian* libblas-dev* libblas3gf* libbz2-dev* libcairo2* libcroco3*
+ libdatrie1* libffi5* libfontconfig1* libfreetype6* libgfortran3*
+ libglib2.0-0* libice6* libjpeg8* libjpeg8-dev* liblapack-dev* liblapack3gf*
+ libmagic1* libncurses5-dev* libpango1.0-0* libpaper-utils* libpaper1*
+ libpcre3-dev* libpcrecpp0* libpipeline1* libpixman-1-0* libpng12-dev*
+ libreadline-dev* libreadline6-dev* libsm6* libthai-data* libthai0* libtiff4*
+ libtinfo-dev* libunistring0* libx11-6* libx11-data* libxau6* libxcb-render0*
+ libxcb-shm0* libxcb1* libxdmcp6* libxext6* libxft2* libxml2* libxrender1*
+ libxss1* libxt6* man-db* po-debconf* r-base-core* r-base-dev* tcl8.5* tk8.5*
ttf-dejavu-core* unzip* x11-common* xdg-utils* zip* zlib1g-dev*
-0 upgraded, 0 newly installed, 71 to remove and 0 not upgraded.
-After this operation, 119 MB disk space will be freed.
-(Reading database ... 15647 files and directories currently installed.)
+0 upgraded, 0 newly installed, 72 to remove and 10 not upgraded.
+After this operation, 122 MB disk space will be freed.
+(Reading database ... 15542 files and directories currently installed.)
Removing r-base-dev ...
Removing cdbs ...
Removing debhelper ...
@@ -829,18 +816,18 @@ Purging configuration files for dpatch ...
Removing file ...
Removing r-base-core ...
Purging configuration files for r-base-core ...
-Removing libpango1.0-0 ...
-Purging configuration files for libpango1.0-0 ...
+Removing libpango1.0-0:kfreebsd-amd64 ...
+Purging configuration files for libpango1.0-0:kfreebsd-amd64 ...
Removing fontconfig ...
Purging configuration files for fontconfig ...
Removing tk8.5 ...
Purging configuration files for tk8.5 ...
-Removing libxft2 ...
-Purging configuration files for libxft2 ...
-Removing libcairo2 ...
-Purging configuration files for libcairo2 ...
-Removing libfontconfig1 ...
-Purging configuration files for libfontconfig1 ...
+Removing libxft2:kfreebsd-amd64 ...
+Purging configuration files for libxft2:kfreebsd-amd64 ...
+Removing libcairo2:kfreebsd-amd64 ...
+Purging configuration files for libcairo2:kfreebsd-amd64 ...
+Removing libfontconfig1:kfreebsd-amd64 ...
+Purging configuration files for libfontconfig1:kfreebsd-amd64 ...
Removing fontconfig-config ...
Purging configuration files for fontconfig-config ...
Removing po-debconf ...
@@ -849,6 +836,10 @@ Removing gettext ...
Removing gettext-base ...
Removing gfortran ...
Removing gfortran-4.6 ...
+Removing man-db ...
+Purging configuration files for man-db ...
+Removing groff-base ...
+Purging configuration files for groff-base ...
Removing html2text ...
Purging configuration files for html2text ...
Removing liblapack-dev ...
@@ -857,72 +848,70 @@ Removing liblapack3gf ...
Purging configuration files for liblapack3gf ...
Removing libblas3gf ...
Purging configuration files for libblas3gf ...
-Removing libbz2-dev ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libthai0 ...
-Purging configuration files for libthai0 ...
-Removing libdatrie1 ...
-Purging configuration files for libdatrie1 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
-Removing libffi5 ...
-Purging configuration files for libffi5 ...
-Removing libfreetype6 ...
-Purging configuration files for libfreetype6 ...
-Removing libgfortran3 ...
-Purging configuration files for libgfortran3 ...
-Removing libxt6 ...
-Purging configuration files for libxt6 ...
-Removing libsm6 ...
-Purging configuration files for libsm6 ...
-Removing libice6 ...
-Purging configuration files for libice6 ...
-Removing libtiff4 ...
-Purging configuration files for libtiff4 ...
-Removing libjpeg8-dev ...
-Removing libjpeg8 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
+Removing libbz2-dev:kfreebsd-amd64 ...
+Removing libcroco3:kfreebsd-amd64 ...
+Purging configuration files for libcroco3:kfreebsd-amd64 ...
+Removing libthai0:kfreebsd-amd64 ...
+Purging configuration files for libthai0:kfreebsd-amd64 ...
+Removing libdatrie1:kfreebsd-amd64 ...
+Purging configuration files for libdatrie1:kfreebsd-amd64 ...
+Removing libglib2.0-0:kfreebsd-amd64 ...
+Purging configuration files for libglib2.0-0:kfreebsd-amd64 ...
+Removing libffi5:kfreebsd-amd64 ...
+Purging configuration files for libffi5:kfreebsd-amd64 ...
+Removing libfreetype6:kfreebsd-amd64 ...
+Purging configuration files for libfreetype6:kfreebsd-amd64 ...
+Removing libgfortran3:kfreebsd-amd64 ...
+Purging configuration files for libgfortran3:kfreebsd-amd64 ...
+Removing libxt6:kfreebsd-amd64 ...
+Purging configuration files for libxt6:kfreebsd-amd64 ...
+Removing libsm6:kfreebsd-amd64 ...
+Purging configuration files for libsm6:kfreebsd-amd64 ...
+Removing libice6:kfreebsd-amd64 ...
+Purging configuration files for libice6:kfreebsd-amd64 ...
+Removing libtiff4:kfreebsd-amd64 ...
+Purging configuration files for libtiff4:kfreebsd-amd64 ...
+Removing libjpeg8-dev:kfreebsd-amd64 ...
+Removing libjpeg8:kfreebsd-amd64 ...
+Removing libmagic1:kfreebsd-amd64 ...
+Purging configuration files for libmagic1:kfreebsd-amd64 ...
Removing libncurses5-dev ...
Removing libpaper-utils ...
Removing libpaper1 ...
Purging configuration files for libpaper1 ...
Removing libpcre3-dev ...
-Removing libpcrecpp0 ...
-Purging configuration files for libpcrecpp0 ...
-Removing man-db ...
-Purging configuration files for man-db ...
-Removing libpipeline1 ...
-Purging configuration files for libpipeline1 ...
-Removing libpixman-1-0 ...
-Purging configuration files for libpixman-1-0 ...
+Removing libpcrecpp0:kfreebsd-amd64 ...
+Purging configuration files for libpcrecpp0:kfreebsd-amd64 ...
+Removing libpipeline1:kfreebsd-amd64 ...
+Purging configuration files for libpipeline1:kfreebsd-amd64 ...
+Removing libpixman-1-0:kfreebsd-amd64 ...
+Purging configuration files for libpixman-1-0:kfreebsd-amd64 ...
Removing libpng12-dev ...
-Removing libreadline-dev ...
-Removing libreadline6-dev ...
+Removing libreadline-dev:kfreebsd-amd64 ...
+Removing libreadline6-dev:kfreebsd-amd64 ...
Removing libthai-data ...
-Removing libtinfo-dev ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libxss1 ...
-Purging configuration files for libxss1 ...
-Removing libxrender1 ...
-Purging configuration files for libxrender1 ...
-Removing libxext6 ...
-Purging configuration files for libxext6 ...
-Removing libx11-6 ...
-Purging configuration files for libx11-6 ...
+Removing libtinfo-dev:kfreebsd-amd64 ...
+Removing libunistring0:kfreebsd-amd64 ...
+Purging configuration files for libunistring0:kfreebsd-amd64 ...
+Removing libxss1:kfreebsd-amd64 ...
+Purging configuration files for libxss1:kfreebsd-amd64 ...
+Removing libxrender1:kfreebsd-amd64 ...
+Purging configuration files for libxrender1:kfreebsd-amd64 ...
+Removing libxext6:kfreebsd-amd64 ...
+Purging configuration files for libxext6:kfreebsd-amd64 ...
+Removing libx11-6:kfreebsd-amd64 ...
+Purging configuration files for libx11-6:kfreebsd-amd64 ...
Removing libx11-data ...
-Removing libxcb-shm0 ...
-Purging configuration files for libxcb-shm0 ...
-Removing libxcb-render0 ...
-Purging configuration files for libxcb-render0 ...
-Removing libxcb1 ...
-Purging configuration files for libxcb1 ...
-Removing libxau6 ...
-Purging configuration files for libxau6 ...
-Removing libxdmcp6 ...
-Purging configuration files for libxdmcp6 ...
+Removing libxcb-shm0:kfreebsd-amd64 ...
+Purging configuration files for libxcb-shm0:kfreebsd-amd64 ...
+Removing libxcb-render0:kfreebsd-amd64 ...
+Purging configuration files for libxcb-render0:kfreebsd-amd64 ...
+Removing libxcb1:kfreebsd-amd64 ...
+Purging configuration files for libxcb1:kfreebsd-amd64 ...
+Removing libxau6:kfreebsd-amd64 ...
+Purging configuration files for libxau6:kfreebsd-amd64 ...
+Removing libxdmcp6:kfreebsd-amd64 ...
+Purging configuration files for libxdmcp6:kfreebsd-amd64 ...
Removing libxml2 ...
Purging configuration files for libxml2 ...
Removing tcl8.5 ...
@@ -937,25 +926,25 @@ Purging configuration files for x11-common ...
dpkg: warning: while removing x11-common, directory '/etc/X11' not empty so not removed.
Removing xdg-utils ...
Removing zip ...
-Removing zlib1g-dev ...
+Removing zlib1g-dev:kfreebsd-amd64 ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: kfreebsd-amd64
-Build-Space: 5086
-Build-Time: 35
+Build-Space: 2950
+Build-Time: 26
Distribution: sid
-Install-Time: 328
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 215
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 431
-Source-Version: 3.10.3-1
-Space: 5086
+Package-Time: 269
+Source-Version: 3.12.0~dfsg-1
+Space: 2950
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0507
-Build needed 00:07:11, 5086k disc space
-Signature with key 'B22267E5' requested:
+Finished at 20120412-0618
+Build needed 00:04:29, 2950k disc space
+Signature with key '94C0145B' requested:
diff --git a/kfreebsd-i386.log b/kfreebsd-i386.log
index 6dedeed..b7bcfd3 100644
--- a/kfreebsd-i386.log
+++ b/kfreebsd-i386.log
@@ -1,47 +1,60 @@
-From buildd at finzi.debian.org Wed Mar 07 04:50:17 2012
-Return-path: <buildd at finzi.debian.org>
+From buildd at field.debian.org Thu Apr 12 04:13:50 2012
+Return-path: <buildd at field.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=merikanto.debian.org,
EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at finzi.debian.org>)
- id 1S58pM-0004MD-TV
- for logs at buildd.debian.org; Wed, 07 Mar 2012 04:50:17 +0000
-Received: from finzi.debian.org ([206.12.19.111])
+ (Exim 4.72) (envelope-from <buildd at field.debian.org>)
+ id 1SIBPp-0003Pp-Bz
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 04:13:50 +0000
+Received: from field.debian.org ([194.177.211.210])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=finzi.debian.org, EMAIL=hostmaster at finzi.debian.org (verified)
+ CN=field.debian.org, EMAIL=hostmaster at field.debian.org (verified)
by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at finzi.debian.org>)
- id 1S58pL-0007QN-Gs; Wed, 07 Mar 2012 04:50:16 +0000
-Received: from buildd by finzi.debian.org with local (Exim 4.72)
- (envelope-from <buildd at finzi.debian.org>)
- id 1S58pI-000E3l-VZ; Wed, 07 Mar 2012 04:50:13 +0000
-Message-Id: <E1S58pI-000E3l-VZ at finzi.debian.org>
+ (Exim 4.72) (envelope-from <buildd at field.debian.org>)
+ id 1SIBPn-0005At-Su; Thu, 12 Apr 2012 04:13:48 +0000
+Received: from buildd by field.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at field.debian.org>)
+ id 1SIBPm-000Mur-Vp; Thu, 12 Apr 2012 04:13:47 +0000
+Message-Id: <E1SIBPm-000Mur-Vp at field.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 7 Mar 2012 04:50:12 +0000
-From: buildd on finzi <buildd at finzi.debian.org>
+Date: Thu, 12 Apr 2012 04:13:46 +0000
+From: buildd on field <buildd at field.debian.org>
To: logs at buildd.debian.org,aurelien at aurel32.net,christoph at debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on kfreebsd-i386
- (dist=sid)
-Key-Id: 76BB3C42
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on
+ kfreebsd-i386 (dist=sid)
+Key-Id: B2824833
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on finzi.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on field.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (kfreebsd-i386) 07 Mar 2012 04:44 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (kfreebsd-i386) 12 Apr 2012 04:07 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: kfreebsd-i386
+Hit http://ftp.gr.debian.org sid InRelease
+Hit http://ftp.gr.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid InRelease
Ign http://incoming.debian.org InRelease
-Hit http://incoming.debian.org Release.gpg
+Hit http://ftp.gr.debian.org sid/contrib Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free Sources/DiffIndex
+Hit http://ftp.gr.debian.org sid/main kfreebsd-i386 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/contrib kfreebsd-i386 Packages/DiffIndex
+Hit http://ftp.gr.debian.org sid/non-free kfreebsd-i386 Packages/DiffIndex
+Ign http://ftp.gr.debian.org sid/contrib TranslationIndex
+Hit http://ftp.gr.debian.org sid/main TranslationIndex
+Ign http://ftp.gr.debian.org sid/non-free TranslationIndex
+Get:1 http://incoming.debian.org Release.gpg [836 B]
+Hit http://ftp.gr.debian.org sid/contrib Translation-en
+Hit http://ftp.gr.debian.org sid/main Translation-en
+Hit http://ftp.gr.debian.org sid/non-free Translation-en
Hit http://incoming.debian.org sid/main Sources/DiffIndex
Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
Hit http://incoming.debian.org sid/non-free Sources/DiffIndex
@@ -51,26 +64,14 @@ Hit http://incoming.debian.org sid/non-free kfreebsd-i386 Packages/DiffIndex
Ign http://incoming.debian.org sid/contrib TranslationIndex
Hit http://incoming.debian.org sid/main TranslationIndex
Ign http://incoming.debian.org sid/non-free TranslationIndex
-Hit http://mirror-ubc.debian.org sid InRelease
-Hit http://mirror-ubc.debian.org sid/main Sources/DiffIndex
-Hit http://incoming.debian.org Release
+Get:2 http://incoming.debian.org Release [1601 B]
Hit http://incoming.debian.org sid/contrib Translation-en
Hit http://incoming.debian.org sid/main Translation-en
-Hit http://mirror-ubc.debian.org sid/contrib Sources/DiffIndex
-Hit http://mirror-ubc.debian.org sid/non-free Sources/DiffIndex
-Hit http://mirror-ubc.debian.org sid/main kfreebsd-i386 Packages/DiffIndex
-Hit http://mirror-ubc.debian.org sid/contrib kfreebsd-i386 Packages/DiffIndex
-Hit http://mirror-ubc.debian.org sid/non-free kfreebsd-i386 Packages/DiffIndex
-Ign http://mirror-ubc.debian.org sid/contrib TranslationIndex
-Hit http://mirror-ubc.debian.org sid/main TranslationIndex
-Ign http://mirror-ubc.debian.org sid/non-free TranslationIndex
-Hit http://mirror-ubc.debian.org sid/contrib Translation-en
-Hit http://mirror-ubc.debian.org sid/main Translation-en
-Hit http://mirror-ubc.debian.org sid/non-free Translation-en
Hit http://incoming.debian.org sid/non-free Translation-en
Hit http://incoming.debian.org Sources
-Hit http://incoming.debian.org Packages
+Get:3 http://incoming.debian.org Packages [734 kB]
Ign http://incoming.debian.org Translation-en
+Fetched 736 kB in 5s (141 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -91,11 +92,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 1s (574 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 1s (181 kB/s)
Download complete and in download only mode
Check arch
@@ -115,12 +116,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -132,37 +133,37 @@ Checking for already installed dependencies...
base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-1)
-coreutils: already installed (8.13-3)
+coreutils: already installed (8.13-3.1)
dash: already installed (0.5.7-3)
-debianutils: already installed (4.2.1)
+debianutils: already installed (4.2.2)
diffutils: already installed (1:3.2-2)
-dpkg: already installed (1.16.1.2)
-e2fsprogs: already installed (1.42.1-2)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-2)
findutils: already installed (4.4.2-4)
-freebsd-utils: already installed (9.0-2)
+freebsd-utils: already installed (9.0+ds1-1)
grep: already installed (2.10-1)
-gzip: already installed (1.4-3)
+gzip: already installed (1.4-5)
hostname: already installed (3.11)
ncurses-base: already installed (5.9-4)
-ncurses-bin: already installed (5.9-4)
+ncurses-bin: already installed (5.9-6)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
-sysvinit-utils: already installed (2.88dsf-22)
-sysvinit: already installed (2.88dsf-22)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
util-linux: already installed (2.20.1-4)
libc6-dev: already installed (~*=PROVIDED=*=)
-gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
@@ -170,34 +171,33 @@ Building dependency tree...
Reading state information...
The following extra packages will be installed:
dpatch file fontconfig fontconfig-config gettext gettext-base gfortran
- gfortran-4.6 html2text intltool-debian libblas-dev libblas3gf libbz2-dev
- libcairo2 libcroco3 libdatrie1 libffi5 libfontconfig1 libfreetype6
- libgfortran3 libglib2.0-0 libice6 libjpeg8 libjpeg8-dev liblapack-dev
- liblapack3gf libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils
- libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4
- libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
- libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
- libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip
- x11-common xdg-utils zip zlib1g-dev
+ gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf
+ libbz2-dev libcairo2 libcroco3 libdatrie1 libffi5 libfontconfig1
+ libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0
+ libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
+ libtiff4 libtinfo-dev libunistring0 libx11-6 libx11-data libxau6
+ libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
+ libxrender1 libxss1 libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5
+ ttf-dejavu-core unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
devscripts dh-make curl defoma gettext-doc gfortran-doc gfortran-4.6-doc
- libgfortran3-dbg ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
- ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp groff less
- www-browser libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html
- texlive-base texlive-latex-base texlive-generic-recommended
- texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
- texlive-latex-recommended texlive-latex-extra texinfo texi2html tclreadline
- gvfs-bin
+ libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
+ ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
+ libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
+ texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
+ texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
+ texlive-latex-extra texinfo texi2html tclreadline gvfs-bin
Recommended packages:
- patchutils autopoint libglib2.0-data shared-mime-info x-ttcidfont-conf
- xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
- x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
- libx11-protocol-perl x11-utils x11-xserver-utils
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info xml-core
+ libmail-sendmail-perl r-recommended r-doc-html xterm x-terminal-emulator
+ libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
+ x11-xserver-utils
The following NEW packages will be installed:
cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 html2text intltool-debian libblas-dev libblas3gf
- libbz2-dev libcairo2 libcroco3 libdatrie1 libffi5 libfontconfig1
+ gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
+ libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libffi5 libfontconfig1
libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8 libjpeg8-dev
liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0
libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
@@ -206,97 +206,95 @@ The following NEW packages will be installed:
libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
libxrender1 libxss1 libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5
tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip zlib1g-dev
-0 upgraded, 71 newly installed, 0 to remove and 0 not upgraded.
-Need to get 20.1 MB/53.2 MB of archives.
-After this operation, 110 MB of additional disk space will be used.
-Get:1 http://mirror-ubc.debian.org/debian/ sid/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
-Get:2 http://mirror-ubc.debian.org/debian/ sid/main r-base-core kfreebsd-i386 2.14.2-1 [20.1 MB]
-Get:3 http://mirror-ubc.debian.org/debian/ sid/main r-base-dev all 2.14.2-1 [3894 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 20.1 MB in 1s (15.1 MB/s)
-Selecting previously unselected package libpipeline1.
-(Reading database ... 11921 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_kfreebsd-i386.deb) ...
+0 upgraded, 72 newly installed, 0 to remove and 9 not upgraded.
+Need to get 0 B/54.9 MB of archives.
+After this operation, 113 MB of additional disk space will be used.
+Selecting previously unselected package libpipeline1:kfreebsd-i386.
+(Reading database ... 11655 files and directories currently installed.)
+Unpacking libpipeline1:kfreebsd-i386 (from .../libpipeline1_1.2.1-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libmagic1:kfreebsd-i386.
+Unpacking libmagic1:kfreebsd-i386 (from .../libmagic1_5.11-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libfreetype6:kfreebsd-i386.
+Unpacking libfreetype6:kfreebsd-i386 (from .../libfreetype6_2.4.9-1_kfreebsd-i386.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3.1_all.deb) ...
-Selecting previously unselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libpixman-1-0.
-Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libfontconfig1:kfreebsd-i386.
+Unpacking libfontconfig1:kfreebsd-i386 (from .../libfontconfig1_2.8.0-3.1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libpixman-1-0:kfreebsd-i386.
+Unpacking libpixman-1-0:kfreebsd-i386 (from .../libpixman-1-0_0.24.4-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxau6:kfreebsd-i386.
+Unpacking libxau6:kfreebsd-i386 (from .../libxau6_1%3a1.0.7-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxdmcp6:kfreebsd-i386.
+Unpacking libxdmcp6:kfreebsd-i386 (from .../libxdmcp6_1%3a1.1.0-4_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxcb1:kfreebsd-i386.
+Unpacking libxcb1:kfreebsd-i386 (from .../libxcb1_1.8.1-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
-Selecting previously unselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxrender1.
-Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_kfreebsd-i386.deb) ...
-Selecting previously unselected package libffi5.
-Unpacking libffi5 (from .../libffi5_3.0.10-3_kfreebsd-i386.deb) ...
-Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_kfreebsd-i386.deb) ...
+Selecting previously unselected package libx11-6:kfreebsd-i386.
+Unpacking libx11-6:kfreebsd-i386 (from .../libx11-6_2%3a1.4.4-4_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxcb-render0:kfreebsd-i386.
+Unpacking libxcb-render0:kfreebsd-i386 (from .../libxcb-render0_1.8.1-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxcb-shm0:kfreebsd-i386.
+Unpacking libxcb-shm0:kfreebsd-i386 (from .../libxcb-shm0_1.8.1-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxrender1:kfreebsd-i386.
+Unpacking libxrender1:kfreebsd-i386 (from .../libxrender1_1%3a0.9.6-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libcairo2:kfreebsd-i386.
+Unpacking libcairo2:kfreebsd-i386 (from .../libcairo2_1.12.0-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libffi5:kfreebsd-i386.
+Unpacking libffi5:kfreebsd-i386 (from .../libffi5_3.0.10-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libglib2.0-0:kfreebsd-i386.
+Unpacking libglib2.0-0:kfreebsd-i386 (from .../libglib2.0-0_2.32.0-4_kfreebsd-i386.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_kfreebsd-i386.deb) ...
-Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libdatrie1.
-Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_kfreebsd-i386.deb) ...
-Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libcroco3:kfreebsd-i386.
+Unpacking libcroco3:kfreebsd-i386 (from .../libcroco3_0.6.5-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libdatrie1:kfreebsd-i386.
+Unpacking libdatrie1:kfreebsd-i386 (from .../libdatrie1_0.2.5-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libgfortran3:kfreebsd-i386.
+Unpacking libgfortran3:kfreebsd-i386 (from .../libgfortran3_4.7.0-3_kfreebsd-i386.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
-Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libjpeg8.
-Unpacking libjpeg8 (from .../libjpeg8_8d-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libice6:kfreebsd-i386.
+Unpacking libice6:kfreebsd-i386 (from .../libice6_2%3a1.0.8-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libjpeg8:kfreebsd-i386.
+Unpacking libjpeg8:kfreebsd-i386 (from .../libjpeg8_8d-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.17-1_all.deb) ...
-Selecting previously unselected package libthai0.
-Unpacking libthai0 (from .../libthai0_0.1.17-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxft2.
-Unpacking libxft2 (from .../libxft2_2.2.0-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libthai0:kfreebsd-i386.
+Unpacking libthai0:kfreebsd-i386 (from .../libthai0_0.1.17-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxft2:kfreebsd-i386.
+Unpacking libxft2:kfreebsd-i386 (from .../libxft2_2.2.0-3_kfreebsd-i386.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_kfreebsd-i386.deb) ...
-Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-5_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxext6.
-Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxss1.
-Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxt6.
-Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libpango1.0-0:kfreebsd-i386.
+Unpacking libpango1.0-0:kfreebsd-i386 (from .../libpango1.0-0_1.30.0-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libpcrecpp0:kfreebsd-i386.
+Unpacking libpcrecpp0:kfreebsd-i386 (from .../libpcrecpp0_1%3a8.30-4_kfreebsd-i386.deb) ...
+Selecting previously unselected package libsm6:kfreebsd-i386.
+Unpacking libsm6:kfreebsd-i386 (from .../libsm6_2%3a1.2.1-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libtiff4:kfreebsd-i386.
+Unpacking libtiff4:kfreebsd-i386 (from .../libtiff4_3.9.6-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libunistring0:kfreebsd-i386.
+Unpacking libunistring0:kfreebsd-i386 (from .../libunistring0_0.9.3-5_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxext6:kfreebsd-i386.
+Unpacking libxext6:kfreebsd-i386 (from .../libxext6_2%3a1.3.0-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxss1:kfreebsd-i386.
+Unpacking libxss1:kfreebsd-i386 (from .../libxss1_1%3a1.2.1-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxt6:kfreebsd-i386.
+Unpacking libxt6:kfreebsd-i386 (from .../libxt6_1%3a1.1.1-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.21-7_kfreebsd-i386.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_kfreebsd-i386.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_kfreebsd-i386.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_5.10-1_kfreebsd-i386.deb) ...
+Unpacking file (from .../file_5.11-1_kfreebsd-i386.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_kfreebsd-i386.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_kfreebsd-i386.deb) ...
Selecting previously unselected package gettext.
@@ -306,47 +304,47 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
Selecting previously unselected package gfortran-4.6.
Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_kfreebsd-i386.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_kfreebsd-i386.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_kfreebsd-i386.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_kfreebsd-i386.deb) ...
Selecting previously unselected package libblas-dev.
Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libbz2-dev.
-Unpacking libbz2-dev (from .../libbz2-dev_1.0.6-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libjpeg8-dev.
-Unpacking libjpeg8-dev (from .../libjpeg8-dev_8d-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libbz2-dev:kfreebsd-i386.
+Unpacking libbz2-dev:kfreebsd-i386 (from .../libbz2-dev_1.0.6-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libjpeg8-dev:kfreebsd-i386.
+Unpacking libjpeg8-dev:kfreebsd-i386 (from .../libjpeg8-dev_8d-1_kfreebsd-i386.deb) ...
Selecting previously unselected package liblapack3gf.
Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_kfreebsd-i386.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_kfreebsd-i386.deb) ...
+Selecting previously unselected package libtinfo-dev:kfreebsd-i386.
+Unpacking libtinfo-dev:kfreebsd-i386 (from .../libtinfo-dev_5.9-6_kfreebsd-i386.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_kfreebsd-i386.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_kfreebsd-i386.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_kfreebsd-i386.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_kfreebsd-i386.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_kfreebsd-i386.deb) ...
-Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_kfreebsd-i386.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_kfreebsd-i386.deb) ...
+Selecting previously unselected package zlib1g-dev:kfreebsd-i386.
+Unpacking zlib1g-dev:kfreebsd-i386 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_kfreebsd-i386.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libreadline6-dev.
-Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_kfreebsd-i386.deb) ...
-Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_kfreebsd-i386.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libreadline6-dev:kfreebsd-i386.
+Unpacking libreadline6-dev:kfreebsd-i386 (from .../libreadline6-dev_6.2-8_kfreebsd-i386.deb) ...
+Selecting previously unselected package libreadline-dev:kfreebsd-i386.
+Unpacking libreadline-dev:kfreebsd-i386 (from .../libreadline-dev_6.2-8_kfreebsd-i386.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../zip_3.0-4_kfreebsd-i386.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../unzip_6.0-5_kfreebsd-i386.deb) ...
+Unpacking unzip (from .../unzip_6.0-6_kfreebsd-i386.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -354,107 +352,108 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_kfreebsd-i386.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_kfreebsd-i386.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_kfreebsd-i386.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_kfreebsd-i386.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
+Setting up libpipeline1:kfreebsd-i386 (1.2.1-1) ...
+Setting up libmagic1:kfreebsd-i386 (5.11-1) ...
+Setting up libfreetype6:kfreebsd-i386 (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
-Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libfontconfig1:kfreebsd-i386 (2.8.0-3.1) ...
+Setting up libpixman-1-0:kfreebsd-i386 (0.24.4-1) ...
+Setting up libxau6:kfreebsd-i386 (1:1.0.7-1) ...
+Setting up libxdmcp6:kfreebsd-i386 (1:1.1.0-4) ...
+Setting up libxcb1:kfreebsd-i386 (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libx11-6:kfreebsd-i386 (2:1.4.4-4) ...
+Setting up libxcb-render0:kfreebsd-i386 (1.8.1-1) ...
+Setting up libxcb-shm0:kfreebsd-i386 (1.8.1-1) ...
+Setting up libxrender1:kfreebsd-i386 (1:0.9.6-2) ...
+Setting up libcairo2:kfreebsd-i386 (1.12.0-2) ...
+Setting up libffi5:kfreebsd-i386 (3.0.10-3) ...
+Setting up libglib2.0-0:kfreebsd-i386 (2.32.0-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libcroco3:kfreebsd-i386 (0.6.5-1) ...
+Setting up libdatrie1:kfreebsd-i386 (0.2.5-3) ...
+Setting up libgfortran3:kfreebsd-i386 (4.7.0-3) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
-Setting up libjpeg8 (8d-1) ...
+Setting up libice6:kfreebsd-i386 (2:1.0.8-2) ...
+Setting up libjpeg8:kfreebsd-i386 (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3) ...
+Setting up libthai0:kfreebsd-i386 (0.1.17-1) ...
+Setting up libxft2:kfreebsd-i386 (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5) ...
-Setting up libxext6 (2:1.3.0-3) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2) ...
-Setting up man-db (2.6.1-1) ...
+Setting up libpango1.0-0:kfreebsd-i386 (1.30.0-1) ...
+Setting up libpcrecpp0:kfreebsd-i386 (1:8.30-4) ...
+Setting up libsm6:kfreebsd-i386 (2:1.2.1-2) ...
+Setting up libtiff4:kfreebsd-i386 (3.9.6-2) ...
+Setting up libunistring0:kfreebsd-i386 (0.9.3-5) ...
+Setting up libxext6:kfreebsd-i386 (2:1.3.0-3) ...
+Setting up libxss1:kfreebsd-i386 (1:1.2.1-2) ...
+Setting up libxt6:kfreebsd-i386 (1:1.1.1-2) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
Setting up libblas-dev (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
+Setting up libbz2-dev:kfreebsd-i386 (1.0.6-1) ...
+Setting up libjpeg8-dev:kfreebsd-i386 (8d-1) ...
Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev:kfreebsd-i386 (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8) ...
-Setting up libreadline-dev (6.2-8) ...
+Setting up libpcre3-dev (1:8.30-4) ...
+Setting up zlib1g-dev:kfreebsd-i386 (1:1.2.6.dfsg-2) ...
+Setting up libpng12-dev (1.2.49-1) ...
+Setting up libreadline6-dev:kfreebsd-i386 (6.2-8) ...
+Setting up libreadline-dev:kfreebsd-i386 (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.0-1) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
Checking correctness of dependencies...
Kernel: GNU/kFreeBSD 8.1-1-686-smp kfreebsd-i386 (i686)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 kfreebsd-kernel-headers_0.77 libc0.1-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1
-Package versions: apt_0.8.15.10 autotools-dev_20120210.1 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpio_2.11-7 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.41 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 freebsd-utils_9.0-2 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.2-base_4.2.4-6 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-3 gpgv_1.4.12-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-3 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 kbdcontrol_9.0-2 kfreebsd-kernel-headers_0.77 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc0.1_2.13-27 libc0.1-dev_2.13-27 libcairo2_1.10.2-7 libcam6_9.0+ds1-1 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgcrypt11_1.5.0-3 libgdbm3_1.8.3-10 libgeom1_9.0+ds1-1 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgnutls26_2.12.16-1 libgomp1_4.6.3-1 libgpg-error0_1.10-3 libgssglue1_0.3-4 libice6_2:1.0.7-2 libjail1_9.0+ds1-1 libjpeg8_8d-1 libjpeg8-dev_8d-1 libkiconv4_9.0+ds1-1 libkvm0_9.0+ds1-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 libldap-2.4-2_2.4.28-1.1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libncurses5-dev_5.9-4 libncursesw5_5.9-4 libp11-kit0_0.11-3 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libprocps0_1:3.3.2-3 libquadmath0_4.6.3-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libsasl2-2_2.1.25.dfsg1-4 libsbuf6_9.0+ds1-1 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42.1-2 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtasn1-3_2.11-1 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libtirpc1_0.2.2-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 login_1:4.1.5-1 lsb-base_3.2+Debian30 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-4 netbase_4.47 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 psmisc_22.16-1 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 kfreebsd-kernel-headers_0.78 libc0.1-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.42 debconf-english_1.5.38 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.2.2 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-2 e2fsprogs_1.42.2-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 freebsd-utils_9.0+ds1-1 g++_4:4.6.3-4 g++-4.6_4.6.3-1 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 kbdcontrol_9.0+ds1-1 kfreebsd-kernel-headers_0.78 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbsd0_0.3.0-2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc0.1_2.13-27 libc0.1-dev_2.13-27 libcairo2_1.12.0-2 libcam6_9.0+ds1-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-2 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libgeom1_9.0+ds1-2 libgfortran3_4.7.0-3 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 libgssglue1_0.3-4 libice6_2:1.0.8-2 libjail1_9.0+ds1-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 libkiconv4_9.0+ds1-2 libkvm0_9.0+ds1-2 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncurses5-dev_5.9-6 libncursesw5_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libprocps0_1:3.3.2-3 libquadmath0_4.7.0-3 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libsbuf6_9.0+ds1-2 libslang2_2.2.4-7 libsm6_2:1.2.1-2 libss2_1.42.2-1 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libtirpc1_0.2.2-5 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-6 netbase_4.47 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 psmisc_22.16-1 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 type-handling_0.2.23 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -465,12 +464,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -480,18 +479,18 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture kfreebsd-i386
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
-/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) insteadmake[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3'
-
+/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -520,25 +519,25 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build
+ debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-/usr/share/cdbs/1/rules/simple-patchsys.mk:31: make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3'
-WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
-/usr/share/cdbs/1/rules/simple-patchsys.mk:31: make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3'
-WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -552,44 +551,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -628,7 +627,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -653,72 +652,67 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_kfreebsd-i386.deb'.
- dpkg-genchanges -B -mkfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org> >../r-bioc-limma_3.10.3-1_kfreebsd-i386.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_kfreebsd-i386.deb'.
+ dpkg-genchanges -B -mkfreebsd-i386 Build Daemon (field) <buildd_kfreebsd-i386-field at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_kfreebsd-i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0449
+Build finished at 20120412-0411
-r-bioc-limma_3.10.3-1_kfreebsd-i386.changes:
+r-bioc-limma_3.12.0~dfsg-1_kfreebsd-i386.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: kfreebsd-i386
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: kfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org>
+Maintainer: kfreebsd-i386 Build Daemon (field) <buildd_kfreebsd-i386-field at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 3bcc23f2fbff65c9eca65d314d0b9855de9fbc9f 1477826 r-bioc-limma_3.10.3-1_kfreebsd-i386.deb
+ 43beda643e71262fd0a3144e88beb11a242a7ad7 809482 r-bioc-limma_3.12.0~dfsg-1_kfreebsd-i386.deb
Checksums-Sha256:
- 490f870af56a874ba1f665615d708b8b83bf382f95712abfd3e5e2d3c61438a3 1477826 r-bioc-limma_3.10.3-1_kfreebsd-i386.deb
+ 2a2abb8e90dcbe1c9a613529a778d814ce71c35f373fa8d13f7d76560c7061d0 809482 r-bioc-limma_3.12.0~dfsg-1_kfreebsd-i386.deb
Files:
- 16eef5e616e0d3073c0b81da769812ab 1477826 gnu-r optional r-bioc-limma_3.10.3-1_kfreebsd-i386.deb
+ ac98e95cf53fe2fc3c8b6192ee17f5ea 809482 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_kfreebsd-i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_kfreebsd-i386.deb
-───────────────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_kfreebsd-i386.deb
+────────────────────────────────────────────
new debian package, version 2.0.
- size 1477826 bytes: control archive= 1581 bytes.
- 779 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 809482 bytes: control archive= 1542 bytes.
+ 783 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: kfreebsd-i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1625
- Depends: libc0.1 (>= 2.3), r-base-core (>= 2.14.2-1)
+ Installed-Size: 928
+ Depends: libc0.1 (>= 2.3), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -730,52 +724,51 @@ r-bioc-limma_3.10.3-1_kfreebsd-i386.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 1901 2012-03-07 04:48 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 967 2012-03-07 04:48 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 1052 2012-03-07 04:48 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6022 2012-03-07 04:49 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5603 2012-03-07 04:49 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 2886 2012-03-07 04:49 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 216 2012-03-07 04:49 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 518 2012-03-07 04:49 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 8120 2012-03-07 04:49 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 383 2012-03-07 04:49 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 198260 2012-03-07 04:49 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 3772 2012-03-07 04:49 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 89361 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rwxr-xr-x root/root 673 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/index.html
--rwxr-xr-x root/root 1711 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 42743 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 737677 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rwxr-xr-x root/root 1230 2012-03-07 04:48 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 2173 2012-03-07 04:48 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1349 2012-03-07 04:49 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 460744 2012-03-07 04:49 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3259 2012-03-07 04:49 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6221 2012-03-07 04:49 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2392 2012-03-07 04:49 ./usr/lib/R/site-library/limma/help/aliases.rds
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 34556 2012-03-07 04:49 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2012-03-07 04:49 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 9458 2012-03-07 04:49 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 04:49 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2012-03-07 04:48 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2302 2012-03-07 04:48 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 560 2012-03-07 04:48 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 1901 2012-04-12 04:11 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 967 2012-04-12 04:11 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 1053 2012-04-12 04:11 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 6157 2012-04-12 04:11 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5727 2012-04-12 04:11 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 2943 2012-04-12 04:11 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 220 2012-04-12 04:11 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 521 2012-04-12 04:11 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 8120 2012-04-12 04:11 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 383 2012-04-12 04:11 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 202050 2012-04-12 04:11 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 3822 2012-04-12 04:11 ./usr/lib/R/site-library/limma/R/limma.rdx
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 91993 2012-04-12 04:11 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rwxr-xr-x root/root 673 2012-04-12 04:11 ./usr/lib/R/site-library/limma/doc/index.html
+-rwxr-xr-x root/root 1711 2012-04-12 04:11 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 42743 2012-04-12 04:11 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 1230 2012-04-12 04:11 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 3989 2012-04-12 04:11 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1390 2012-04-12 04:11 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 474464 2012-04-12 04:11 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3343 2012-04-12 04:11 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 6317 2012-04-12 04:11 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 2431 2012-04-12 04:11 ./usr/lib/R/site-library/limma/help/aliases.rds
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 35015 2012-04-12 04:11 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2012-04-12 04:11 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 9754 2012-04-12 04:11 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 04:11 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 264 2012-04-12 04:11 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 2457 2012-04-12 04:11 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 27996 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 683 2012-04-12 04:11 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -789,30 +782,30 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ki-sbuild-1331095495-50163/build/buildd-r-bioc-limma_3.10.3-1-kfreebsd-i386-Gx31Qi
+Purging /var/lib/schroot/mount/sid-ki-sbuild-1334203643-84709/build/buildd-r-bioc-limma_3.12.0~dfsg-1-kfreebsd-i386-oa030Z
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 9 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following packages will be REMOVED:
cdbs* debhelper* dpatch* file* fontconfig* fontconfig-config* gettext*
- gettext-base* gfortran* gfortran-4.6* html2text* intltool-debian*
- libblas-dev* libblas3gf* libbz2-dev* libcairo2* libcroco3* libdatrie1*
- libffi5* libfontconfig1* libfreetype6* libgfortran3* libglib2.0-0* libice6*
- libjpeg8* libjpeg8-dev* liblapack-dev* liblapack3gf* libmagic1*
- libncurses5-dev* libpango1.0-0* libpaper-utils* libpaper1* libpcre3-dev*
- libpcrecpp0* libpipeline1* libpixman-1-0* libpng12-dev* libreadline-dev*
- libreadline6-dev* libsm6* libthai-data* libthai0* libtiff4* libtinfo-dev*
- libunistring0* libx11-6* libx11-data* libxau6* libxcb-render0* libxcb-shm0*
- libxcb1* libxdmcp6* libxext6* libxft2* libxml2* libxrender1* libxss1*
- libxt6* man-db* po-debconf* r-base-core* r-base-dev* tcl8.5* tk8.5*
+ gettext-base* gfortran* gfortran-4.6* groff-base* html2text*
+ intltool-debian* libblas-dev* libblas3gf* libbz2-dev* libcairo2* libcroco3*
+ libdatrie1* libffi5* libfontconfig1* libfreetype6* libgfortran3*
+ libglib2.0-0* libice6* libjpeg8* libjpeg8-dev* liblapack-dev* liblapack3gf*
+ libmagic1* libncurses5-dev* libpango1.0-0* libpaper-utils* libpaper1*
+ libpcre3-dev* libpcrecpp0* libpipeline1* libpixman-1-0* libpng12-dev*
+ libreadline-dev* libreadline6-dev* libsm6* libthai-data* libthai0* libtiff4*
+ libtinfo-dev* libunistring0* libx11-6* libx11-data* libxau6* libxcb-render0*
+ libxcb-shm0* libxcb1* libxdmcp6* libxext6* libxft2* libxml2* libxrender1*
+ libxss1* libxt6* man-db* po-debconf* r-base-core* r-base-dev* tcl8.5* tk8.5*
ttf-dejavu-core* unzip* x11-common* xdg-utils* zip* zlib1g-dev*
-0 upgraded, 0 newly installed, 71 to remove and 0 not upgraded.
-After this operation, 110 MB disk space will be freed.
-(Reading database ... 15656 files and directories currently installed.)
+0 upgraded, 0 newly installed, 72 to remove and 9 not upgraded.
+After this operation, 113 MB disk space will be freed.
+(Reading database ... 15631 files and directories currently installed.)
Removing r-base-dev ...
Removing cdbs ...
Removing debhelper ...
@@ -821,18 +814,18 @@ Purging configuration files for dpatch ...
Removing file ...
Removing r-base-core ...
Purging configuration files for r-base-core ...
-Removing libpango1.0-0 ...
-Purging configuration files for libpango1.0-0 ...
+Removing libpango1.0-0:kfreebsd-i386 ...
+Purging configuration files for libpango1.0-0:kfreebsd-i386 ...
Removing fontconfig ...
Purging configuration files for fontconfig ...
Removing tk8.5 ...
Purging configuration files for tk8.5 ...
-Removing libxft2 ...
-Purging configuration files for libxft2 ...
-Removing libcairo2 ...
-Purging configuration files for libcairo2 ...
-Removing libfontconfig1 ...
-Purging configuration files for libfontconfig1 ...
+Removing libxft2:kfreebsd-i386 ...
+Purging configuration files for libxft2:kfreebsd-i386 ...
+Removing libcairo2:kfreebsd-i386 ...
+Purging configuration files for libcairo2:kfreebsd-i386 ...
+Removing libfontconfig1:kfreebsd-i386 ...
+Purging configuration files for libfontconfig1:kfreebsd-i386 ...
Removing fontconfig-config ...
Purging configuration files for fontconfig-config ...
Removing po-debconf ...
@@ -841,6 +834,10 @@ Removing gettext ...
Removing gettext-base ...
Removing gfortran ...
Removing gfortran-4.6 ...
+Removing man-db ...
+Purging configuration files for man-db ...
+Removing groff-base ...
+Purging configuration files for groff-base ...
Removing html2text ...
Purging configuration files for html2text ...
Removing liblapack-dev ...
@@ -849,72 +846,70 @@ Removing liblapack3gf ...
Purging configuration files for liblapack3gf ...
Removing libblas3gf ...
Purging configuration files for libblas3gf ...
-Removing libbz2-dev ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libthai0 ...
-Purging configuration files for libthai0 ...
-Removing libdatrie1 ...
-Purging configuration files for libdatrie1 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
-Removing libffi5 ...
-Purging configuration files for libffi5 ...
-Removing libfreetype6 ...
-Purging configuration files for libfreetype6 ...
-Removing libgfortran3 ...
-Purging configuration files for libgfortran3 ...
-Removing libxt6 ...
-Purging configuration files for libxt6 ...
-Removing libsm6 ...
-Purging configuration files for libsm6 ...
-Removing libice6 ...
-Purging configuration files for libice6 ...
-Removing libtiff4 ...
-Purging configuration files for libtiff4 ...
-Removing libjpeg8-dev ...
-Removing libjpeg8 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
+Removing libbz2-dev:kfreebsd-i386 ...
+Removing libcroco3:kfreebsd-i386 ...
+Purging configuration files for libcroco3:kfreebsd-i386 ...
+Removing libthai0:kfreebsd-i386 ...
+Purging configuration files for libthai0:kfreebsd-i386 ...
+Removing libdatrie1:kfreebsd-i386 ...
+Purging configuration files for libdatrie1:kfreebsd-i386 ...
+Removing libglib2.0-0:kfreebsd-i386 ...
+Purging configuration files for libglib2.0-0:kfreebsd-i386 ...
+Removing libffi5:kfreebsd-i386 ...
+Purging configuration files for libffi5:kfreebsd-i386 ...
+Removing libfreetype6:kfreebsd-i386 ...
+Purging configuration files for libfreetype6:kfreebsd-i386 ...
+Removing libgfortran3:kfreebsd-i386 ...
+Purging configuration files for libgfortran3:kfreebsd-i386 ...
+Removing libxt6:kfreebsd-i386 ...
+Purging configuration files for libxt6:kfreebsd-i386 ...
+Removing libsm6:kfreebsd-i386 ...
+Purging configuration files for libsm6:kfreebsd-i386 ...
+Removing libice6:kfreebsd-i386 ...
+Purging configuration files for libice6:kfreebsd-i386 ...
+Removing libtiff4:kfreebsd-i386 ...
+Purging configuration files for libtiff4:kfreebsd-i386 ...
+Removing libjpeg8-dev:kfreebsd-i386 ...
+Removing libjpeg8:kfreebsd-i386 ...
+Removing libmagic1:kfreebsd-i386 ...
+Purging configuration files for libmagic1:kfreebsd-i386 ...
Removing libncurses5-dev ...
Removing libpaper-utils ...
Removing libpaper1 ...
Purging configuration files for libpaper1 ...
Removing libpcre3-dev ...
-Removing libpcrecpp0 ...
-Purging configuration files for libpcrecpp0 ...
-Removing man-db ...
-Purging configuration files for man-db ...
-Removing libpipeline1 ...
-Purging configuration files for libpipeline1 ...
-Removing libpixman-1-0 ...
-Purging configuration files for libpixman-1-0 ...
+Removing libpcrecpp0:kfreebsd-i386 ...
+Purging configuration files for libpcrecpp0:kfreebsd-i386 ...
+Removing libpipeline1:kfreebsd-i386 ...
+Purging configuration files for libpipeline1:kfreebsd-i386 ...
+Removing libpixman-1-0:kfreebsd-i386 ...
+Purging configuration files for libpixman-1-0:kfreebsd-i386 ...
Removing libpng12-dev ...
-Removing libreadline-dev ...
-Removing libreadline6-dev ...
+Removing libreadline-dev:kfreebsd-i386 ...
+Removing libreadline6-dev:kfreebsd-i386 ...
Removing libthai-data ...
-Removing libtinfo-dev ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libxss1 ...
-Purging configuration files for libxss1 ...
-Removing libxrender1 ...
-Purging configuration files for libxrender1 ...
-Removing libxext6 ...
-Purging configuration files for libxext6 ...
-Removing libx11-6 ...
-Purging configuration files for libx11-6 ...
+Removing libtinfo-dev:kfreebsd-i386 ...
+Removing libunistring0:kfreebsd-i386 ...
+Purging configuration files for libunistring0:kfreebsd-i386 ...
+Removing libxss1:kfreebsd-i386 ...
+Purging configuration files for libxss1:kfreebsd-i386 ...
+Removing libxrender1:kfreebsd-i386 ...
+Purging configuration files for libxrender1:kfreebsd-i386 ...
+Removing libxext6:kfreebsd-i386 ...
+Purging configuration files for libxext6:kfreebsd-i386 ...
+Removing libx11-6:kfreebsd-i386 ...
+Purging configuration files for libx11-6:kfreebsd-i386 ...
Removing libx11-data ...
-Removing libxcb-shm0 ...
-Purging configuration files for libxcb-shm0 ...
-Removing libxcb-render0 ...
-Purging configuration files for libxcb-render0 ...
-Removing libxcb1 ...
-Purging configuration files for libxcb1 ...
-Removing libxau6 ...
-Purging configuration files for libxau6 ...
-Removing libxdmcp6 ...
-Purging configuration files for libxdmcp6 ...
+Removing libxcb-shm0:kfreebsd-i386 ...
+Purging configuration files for libxcb-shm0:kfreebsd-i386 ...
+Removing libxcb-render0:kfreebsd-i386 ...
+Purging configuration files for libxcb-render0:kfreebsd-i386 ...
+Removing libxcb1:kfreebsd-i386 ...
+Purging configuration files for libxcb1:kfreebsd-i386 ...
+Removing libxau6:kfreebsd-i386 ...
+Purging configuration files for libxau6:kfreebsd-i386 ...
+Removing libxdmcp6:kfreebsd-i386 ...
+Purging configuration files for libxdmcp6:kfreebsd-i386 ...
Removing libxml2 ...
Purging configuration files for libxml2 ...
Removing tcl8.5 ...
@@ -926,28 +921,27 @@ Removing x11-common ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of stop.
Purging configuration files for x11-common ...
-dpkg: warning: while removing x11-common, directory '/etc/X11' not empty so not removed.
Removing xdg-utils ...
Removing zip ...
-Removing zlib1g-dev ...
+Removing zlib1g-dev:kfreebsd-i386 ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: kfreebsd-i386
-Build-Space: 5082
-Build-Time: 36
+Build-Space: 2946
+Build-Time: 27
Distribution: sid
-Install-Time: 203
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 208
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 261
-Source-Version: 3.10.3-1
-Space: 5082
+Package-Time: 262
+Source-Version: 3.12.0~dfsg-1
+Space: 2946
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0449
-Build needed 00:04:21, 5082k disc space
-Signature with key '76BB3C42' requested:
+Finished at 20120412-0411
+Build needed 00:04:22, 2946k disc space
+Signature with key 'B2824833' requested:
diff --git a/mips.log b/mips.log
index a281159..67d01fb 100644
--- a/mips.log
+++ b/mips.log
@@ -1,69 +1,70 @@
-From buildd2 at corelli.debian.org Wed Mar 07 05:22:21 2012
-Return-path: <buildd2 at corelli.debian.org>
-Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
+From buildd at ball.debian.org Thu Apr 12 05:01:46 2012
+Return-path: <buildd at ball.debian.org>
+Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=kokkonen.debian.org,
- EMAIL=hostmaster at kokkonen.debian.org (verified)
+ CN=merikanto.debian.org,
+ EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd2 at corelli.debian.org>)
- id 1S59KO-0001Pp-OU
- for logs at buildd.debian.org; Wed, 07 Mar 2012 05:22:21 +0000
-Received: from corelli.debian.org ([2607:f8f0:610:4000:2e0:98ff:fe00:4489])
+ (Exim 4.72) (envelope-from <buildd at ball.debian.org>)
+ id 1SICAE-0000ri-M4
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 05:01:46 +0000
+Received: from ball.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d09])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=corelli.debian.org, EMAIL=hostmaster at corelli.debian.org (verified)
- by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd2 at corelli.debian.org>)
- id 1S59KN-0007st-2K
- for logs at buildd.debian.org; Wed, 07 Mar 2012 05:22:19 +0000
-Received: from buildd2 by corelli.debian.org with local (Exim 4.72)
- (envelope-from <buildd2 at corelli.debian.org>) id 1S59KK-0004AV-Gi
- for logs at buildd.debian.org; Wed, 07 Mar 2012 05:22:16 +0000
-Date: Wed, 07 Mar 2012 05:22:16 +0000
-Message-Id: <E1S59KK-0004AV-Gi at corelli.debian.org>
-From: buildd on corelli <buildd2 at corelli.debian.org>
-To: logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on mips (dist=sid)
+ CN=ball.debian.org, EMAIL=hostmaster at ball.debian.org (verified)
+ by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at ball.debian.org>)
+ id 1SICAD-00079W-RK
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 05:01:46 +0000
+Received: from buildd by ball.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at ball.debian.org>)
+ id 1SICAC-00020x-Tg; Thu, 12 Apr 2012 05:01:45 +0000
+Date: Thu, 12 Apr 2012 05:01:44 +0000
+Message-Id: <E1SICAC-00020x-Tg at ball.debian.org>
+From: buildd on ball <buildd at ball.debian.org>
+To: logs at buildd.debian.org,buildd-porters at ball.debian.org
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on mips
+ (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on corelli.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on ball.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (mips) 07 Mar 2012 05:12 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (mips) 12 Apr 2012 04:51 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: mips
-Get:1 http://mirror-ubc.debian.org unstable InRelease [197 kB]
-Get:2 http://incoming.debian.org unstable InRelease [197 kB]
-Get:3 http://mirror-ubc.debian.org unstable/main Sources [6231 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [208 kB]
+Get:2 http://incoming.debian.org unstable InRelease [208 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [6221 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org Release [1616 B]
-Get:6 http://incoming.debian.org unstable/main Sources [6231 kB]
-Get:7 http://mirror-ubc.debian.org unstable/contrib Sources [55.0 kB]
-Get:8 http://mirror-ubc.debian.org unstable/non-free Sources [98.8 kB]
-Get:9 http://mirror-ubc.debian.org unstable/main mips Packages [5706 kB]
-Get:10 http://mirror-ubc.debian.org unstable/contrib mips Packages [37.3 kB]
-Ign http://mirror-ubc.debian.org unstable/contrib TranslationIndex
-Get:11 http://mirror-ubc.debian.org unstable/main TranslationIndex [2154 B]
-Get:12 http://mirror-ubc.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:13 http://mirror-ubc.debian.org unstable/main Translation-en [3906 kB]
-Get:14 http://incoming.debian.org unstable/contrib Sources [55.0 kB]
-Get:15 http://incoming.debian.org unstable/non-free Sources [98.8 kB]
-Get:16 http://incoming.debian.org unstable/main mips Packages [5706 kB]
-Get:17 http://incoming.debian.org unstable/contrib mips Packages [37.3 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6221 kB]
+Get:6 http://ftp.de.debian.org unstable/contrib Sources [54.5 kB]
+Get:7 http://ftp.de.debian.org unstable/non-free Sources [97.7 kB]
+Get:8 http://ftp.de.debian.org unstable/main mips Packages [5775 kB]
+Get:9 http://ftp.de.debian.org unstable/contrib mips Packages [37.2 kB]
+Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
+Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
+Get:11 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://ftp.de.debian.org unstable/main Translation-en [3936 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [54.5 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.7 kB]
+Get:15 http://incoming.debian.org unstable/main mips Packages [5775 kB]
+Get:16 http://incoming.debian.org unstable/contrib mips Packages [37.2 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:18 http://incoming.debian.org unstable/main TranslationIndex [2154 B]
-Get:19 http://incoming.debian.org Sources [63.2 kB]
-Get:20 http://incoming.debian.org Packages [861 kB]
-Get:21 http://incoming.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:22 http://incoming.debian.org unstable/main Translation-en [3906 kB]
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3936 kB]
+Get:21 http://incoming.debian.org Sources [42.8 kB]
+Get:22 http://incoming.debian.org Packages [744 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.5 MB in 1min 32s (364 kB/s)
+Fetched 33.5 MB in 1min 35s (351 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,11 +85,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 1s (840 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 1s (266 kB/s)
Download complete and in download only mode
Check arch
@@ -108,12 +109,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 72 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 44 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 72 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -127,7 +128,7 @@ base-passwd: already installed (3.5.24)
bash: already installed (4.2-1)
coreutils: already installed (8.13-3)
dash: already installed (0.5.7-2)
-debianutils: already installed (4.2.1)
+debianutils: already installed (4.1)
diffutils: already installed (1:3.2-1)
dpkg: already installed (1.16.1.2)
e2fsprogs: already installed (1.42-1)
@@ -137,204 +138,218 @@ gzip: already installed (1.4-2)
hostname: already installed (3.10)
ncurses-base: already installed (5.9-4)
ncurses-bin: already installed (5.9-4)
-perl-base: already installed (5.14.2-7)
+perl-base: already installed (5.14.2-6)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-22)
-sysvinit: already installed (2.88dsf-22)
+sysvinit-utils: already installed (2.88dsf-18)
+sysvinit: already installed (2.88dsf-18)
tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-1.2)
mount: already installed (2.20.1-1.2)
util-linux: already installed (2.20.1-1.2)
-libc6-dev: already installed (2.13-26)
+libc6-dev: already installed (2.13-24)
gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
- gcc-4.6 gcc-4.6-base gettext gettext-base gfortran gfortran-4.6 groff-base
- html2text intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2
- libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgcc1
- libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libstdc++6 libstdc++6-4.6-dev libthai-data libthai0 libtiff4
- libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
- libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
- libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip
- x11-common xdg-utils zip zlib1g zlib1g-dev
+ bsdmainutils cpp cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
+ gcc gcc-4.6 gcc-4.6-base gcc-4.7-base gettext gettext-base gfortran
+ gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf
+ libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1
+ libfreetype6 libgcc1 libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5
+ libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev
+ libthai-data libthai0 libtiff4 libtinfo-dev libtinfo5 libunistring0 libx11-6
+ libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
+ libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
+ r-base-core tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
+ zlib1g zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make curl
- defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-4.6-multilib
- libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg libquadmath-dbg libmudflap0-dbg
- gettext-doc gfortran-multilib gfortran-doc gfortran-4.6-multilib
- gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
- ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ curl defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib
+ manpages-dev autoconf automake1.9 libtool flex bison gdb gcc-doc
+ gcc-4.6-multilib libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg
+ libquadmath-dbg libmudflap0-dbg gettext-doc gfortran-multilib gfortran-doc
+ gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
+ ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info libgpm2
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext
- gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian
- libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi5 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
- libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
- po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip
- x11-common xdg-utils zip zlib1g-dev
+ bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config
+ gcc-4.7-base gettext gettext-base gfortran gfortran-4.6 groff-base html2text
+ intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgfortran3
+ libglib2.0-0 libice6 libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf
+ libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3
+ libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4
+ libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
+ libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
+ libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core
+ ucf unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libgcc1 libgomp1 libstdc++6
- libstdc++6-4.6-dev zlib1g
-9 upgraded, 76 newly installed, 0 to remove and 35 not upgraded.
-Need to get 72.6 MB of archives.
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base libgcc1 libgomp1 libncurses5
+ libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin zlib1g
+14 upgraded, 78 newly installed, 0 to remove and 58 not upgraded.
+Need to get 74.4 MB of archives.
After this operation, 121 MB of additional disk space will be used.
-Get:1 http://mirror-ubc.debian.org/debian/ unstable/main libgomp1 mips 4.6.3-1 [26.2 kB]
-Get:2 http://mirror-ubc.debian.org/debian/ unstable/main gcc-4.6-base mips 4.6.3-1 [139 kB]
-Get:3 http://mirror-ubc.debian.org/debian/ unstable/main libgcc1 mips 1:4.6.3-1 [69.5 kB]
-Get:4 http://mirror-ubc.debian.org/debian/ unstable/main cpp-4.6 mips 4.6.3-1 [3771 kB]
-Get:5 http://mirror-ubc.debian.org/debian/ unstable/main libstdc++6-4.6-dev mips 4.6.3-1 [1725 kB]
-Get:6 http://mirror-ubc.debian.org/debian/ unstable/main g++-4.6 mips 4.6.3-1 [6309 kB]
-Get:7 http://mirror-ubc.debian.org/debian/ unstable/main gcc-4.6 mips 4.6.3-1 [4045 kB]
-Get:8 http://mirror-ubc.debian.org/debian/ unstable/main libstdc++6 mips 4.6.3-1 [301 kB]
-Get:9 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g mips 1:1.2.6.dfsg-2 [85.3 kB]
-Get:10 http://mirror-ubc.debian.org/debian/ unstable/main libpipeline1 mips 1.2.1-1 [36.7 kB]
-Get:11 http://mirror-ubc.debian.org/debian/ unstable/main libmagic1 mips 5.10-1 [252 kB]
-Get:12 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3 mips 8.12-4 [227 kB]
-Get:13 http://mirror-ubc.debian.org/debian/ unstable/main libexpat1 mips 2.0.1-7.2 [143 kB]
-Get:14 http://mirror-ubc.debian.org/debian/ unstable/main libfreetype6 mips 2.4.8-1 [423 kB]
-Get:15 http://mirror-ubc.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
-Get:16 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
-Get:17 http://mirror-ubc.debian.org/debian/ unstable/main libfontconfig1 mips 2.8.0-3.1 [286 kB]
-Get:18 http://mirror-ubc.debian.org/debian/ unstable/main libpixman-1-0 mips 0.24.4-1 [362 kB]
-Get:19 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-0 mips 1.2.47-1 [184 kB]
-Get:20 http://mirror-ubc.debian.org/debian/ unstable/main libxau6 mips 1:1.0.6-4 [16.8 kB]
-Get:21 http://mirror-ubc.debian.org/debian/ unstable/main libxdmcp6 mips 1:1.1.0-4 [22.4 kB]
-Get:22 http://mirror-ubc.debian.org/debian/ unstable/main libxcb1 mips 1.8-2 [41.3 kB]
-Get:23 http://mirror-ubc.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
-Get:24 http://mirror-ubc.debian.org/debian/ unstable/main libx11-6 mips 2:1.4.4-4 [859 kB]
-Get:25 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-render0 mips 1.8-2 [16.1 kB]
-Get:26 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-shm0 mips 1.8-2 [9934 B]
-Get:27 http://mirror-ubc.debian.org/debian/ unstable/main libxrender1 mips 1:0.9.6-2 [30.2 kB]
-Get:28 http://mirror-ubc.debian.org/debian/ unstable/main libcairo2 mips 1.10.2-7 [926 kB]
-Get:29 http://mirror-ubc.debian.org/debian/ unstable/main libffi5 mips 3.0.10-3 [23.0 kB]
-Get:30 http://mirror-ubc.debian.org/debian/ unstable/main libglib2.0-0 mips 2.30.2-6 [1751 kB]
-Get:31 http://mirror-ubc.debian.org/debian/ unstable/main libxml2 mips 2.7.8.dfsg-7 [859 kB]
-Get:32 http://mirror-ubc.debian.org/debian/ unstable/main libcroco3 mips 0.6.4-2 [139 kB]
-Get:33 http://mirror-ubc.debian.org/debian/ unstable/main libdatrie1 mips 0.2.5-3 [28.1 kB]
-Get:34 http://mirror-ubc.debian.org/debian/ unstable/main libgfortran3 mips 4.6.3-1 [231 kB]
-Get:35 http://mirror-ubc.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
-Get:36 http://mirror-ubc.debian.org/debian/ unstable/main libice6 mips 2:1.0.7-2 [50.6 kB]
-Get:37 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8 mips 8d-1 [146 kB]
-Get:38 http://mirror-ubc.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
-Get:39 http://mirror-ubc.debian.org/debian/ unstable/main libthai0 mips 0.1.17-1 [43.7 kB]
-Get:40 http://mirror-ubc.debian.org/debian/ unstable/main libxft2 mips 2.2.0-3 [56.7 kB]
-Get:41 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig mips 2.8.0-3.1 [334 kB]
-Get:42 http://mirror-ubc.debian.org/debian/ unstable/main libpango1.0-0 mips 1.29.4-2 [434 kB]
-Get:43 http://mirror-ubc.debian.org/debian/ unstable/main libpcrecpp0 mips 8.12-4 [113 kB]
-Get:44 http://mirror-ubc.debian.org/debian/ unstable/main libsm6 mips 2:1.2.0-2 [28.2 kB]
-Get:45 http://mirror-ubc.debian.org/debian/ unstable/main libtiff4 mips 3.9.6-1 [191 kB]
-Get:46 http://mirror-ubc.debian.org/debian/ unstable/main libunistring0 mips 0.9.3-5 [411 kB]
-Get:47 http://mirror-ubc.debian.org/debian/ unstable/main libxext6 mips 2:1.3.0-3 [48.4 kB]
-Get:48 http://mirror-ubc.debian.org/debian/ unstable/main libxss1 mips 1:1.2.1-2 [16.5 kB]
-Get:49 http://mirror-ubc.debian.org/debian/ unstable/main libxt6 mips 1:1.1.1-2 [189 kB]
-Get:50 http://mirror-ubc.debian.org/debian/ unstable/main bsdmainutils mips 9.0.1 [207 kB]
-Get:51 http://mirror-ubc.debian.org/debian/ unstable/main groff-base mips 1.21-6 [1152 kB]
-Get:52 http://mirror-ubc.debian.org/debian/ unstable/main man-db mips 2.6.1-1 [1027 kB]
-Get:53 http://mirror-ubc.debian.org/debian/ unstable/main file mips 5.10-1 [52.8 kB]
-Get:54 http://mirror-ubc.debian.org/debian/ unstable/main gettext-base mips 0.18.1.1-5 [136 kB]
-Get:55 http://mirror-ubc.debian.org/debian/ unstable/main cdbs all 0.4.105 [78.7 kB]
-Get:56 http://mirror-ubc.debian.org/debian/ unstable/main html2text mips 1.3.2a-15 [103 kB]
-Get:57 http://mirror-ubc.debian.org/debian/ unstable/main gettext mips 0.18.1.1-5 [2032 kB]
-Get:58 http://mirror-ubc.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:59 http://mirror-ubc.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:60 http://mirror-ubc.debian.org/debian/ unstable/main debhelper all 9.20120115 [693 kB]
-Get:61 http://mirror-ubc.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
-Get:62 http://mirror-ubc.debian.org/debian/ unstable/main gfortran-4.6 mips 4.6.3-1 [4376 kB]
-Get:63 http://mirror-ubc.debian.org/debian/ unstable/main gfortran mips 4:4.6.2-4 [1136 B]
-Get:64 http://mirror-ubc.debian.org/debian/ unstable/main libblas3gf mips 1.2.20110419-2 [203 kB]
-Get:65 http://mirror-ubc.debian.org/debian/ unstable/main libblas-dev mips 1.2.20110419-2 [243 kB]
-Get:66 http://mirror-ubc.debian.org/debian/ unstable/main libbz2-dev mips 1.0.6-1 [37.3 kB]
-Get:67 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8-dev mips 8d-1 [258 kB]
-Get:68 http://mirror-ubc.debian.org/debian/ unstable/main liblapack3gf mips 3.3.1-1 [4250 kB]
-Get:69 http://mirror-ubc.debian.org/debian/ unstable/main liblapack-dev mips 3.3.1-1 [4908 kB]
-Get:70 http://mirror-ubc.debian.org/debian/ unstable/main libtinfo-dev mips 5.9-4 [104 kB]
-Get:71 http://mirror-ubc.debian.org/debian/ unstable/main libncurses5-dev mips 5.9-4 [406 kB]
-Get:72 http://mirror-ubc.debian.org/debian/ unstable/main libpaper1 mips 1.1.24+nmu1 [21.3 kB]
-Get:73 http://mirror-ubc.debian.org/debian/ unstable/main libpaper-utils mips 1.1.24+nmu1 [18.2 kB]
-Get:74 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3-dev mips 8.12-4 [318 kB]
-Get:75 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g-dev mips 1:1.2.6.dfsg-2 [211 kB]
-Get:76 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-dev mips 1.2.47-1 [276 kB]
-Get:77 http://mirror-ubc.debian.org/debian/ unstable/main libreadline6-dev mips 6.2-8 [270 kB]
-Get:78 http://mirror-ubc.debian.org/debian/ unstable/main libreadline-dev mips 6.2-8 [890 B]
-Get:79 http://mirror-ubc.debian.org/debian/ unstable/main zip mips 3.0-4 [332 kB]
-Get:80 http://mirror-ubc.debian.org/debian/ unstable/main unzip mips 6.0-5 [189 kB]
-Get:81 http://mirror-ubc.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
-Get:82 http://mirror-ubc.debian.org/debian/ unstable/main tcl8.5 mips 8.5.11-1 [1613 kB]
-Get:83 http://mirror-ubc.debian.org/debian/ unstable/main tk8.5 mips 8.5.11-1 [1173 kB]
-Get:84 http://mirror-ubc.debian.org/debian/ unstable/main r-base-core mips 2.14.2-1 [19.7 MB]
-Get:85 http://mirror-ubc.debian.org/debian/ unstable/main r-base-dev all 2.14.2-1 [3894 B]
+Get:1 http://ftp.de.debian.org/debian/ unstable/main ncurses-bin mips 5.9-6 [329 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main gcc-4.7-base mips 4.7.0-2 [139 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libgcc1 mips 1:4.7.0-2 [70.4 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libstdc++6 mips 4.7.0-2 [311 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libtinfo5 mips 5.9-6 [268 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libncurses5 mips 5.9-6 [284 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main zlib1g mips 1:1.2.6.dfsg-2 [85.3 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 mips 1.2.1-1 [36.7 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libmagic1 mips 5.11-1 [253 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main libpcre3 mips 1:8.30-4 [244 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libexpat1 mips 2.1.0-1 [145 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 mips 2.4.9-1 [433 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main ucf all 3.0025+nmu2 [70.6 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 mips 2.8.0-3.1 [286 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 mips 0.24.4-1 [362 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 mips 1.2.49-1 [184 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main libxau6 mips 1:1.0.7-1 [18.3 kB]
+Get:20 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 mips 1:1.1.0-4 [22.4 kB]
+Get:21 http://ftp.de.debian.org/debian/ unstable/main libxcb1 mips 1.8.1-1 [41.2 kB]
+Get:22 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
+Get:23 http://ftp.de.debian.org/debian/ unstable/main libx11-6 mips 2:1.4.4-4 [859 kB]
+Get:24 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 mips 1.8.1-1 [16.2 kB]
+Get:25 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 mips 1.8.1-1 [9952 B]
+Get:26 http://ftp.de.debian.org/debian/ unstable/main libxrender1 mips 1:0.9.6-2 [30.2 kB]
+Get:27 http://ftp.de.debian.org/debian/ unstable/main libcairo2 mips 1.12.0-2 [901 kB]
+Get:28 http://ftp.de.debian.org/debian/ unstable/main libffi5 mips 3.0.10-3 [23.0 kB]
+Get:29 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 mips 2.32.0-4 [1968 kB]
+Get:30 http://ftp.de.debian.org/debian/ unstable/main libxml2 mips 2.7.8.dfsg-7 [859 kB]
+Get:31 http://ftp.de.debian.org/debian/ unstable/main libcroco3 mips 0.6.5-1 [140 kB]
+Get:32 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 mips 0.2.5-3 [28.1 kB]
+Get:33 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 mips 4.7.0-2 [240 kB]
+Get:34 http://ftp.de.debian.org/debian/ unstable/main libgomp1 mips 4.7.0-2 [28.8 kB]
+Get:35 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
+Get:36 http://ftp.de.debian.org/debian/ unstable/main libice6 mips 2:1.0.8-2 [56.5 kB]
+Get:37 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 mips 8d-1 [146 kB]
+Get:38 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
+Get:39 http://ftp.de.debian.org/debian/ unstable/main libthai0 mips 0.1.17-1 [43.7 kB]
+Get:40 http://ftp.de.debian.org/debian/ unstable/main libxft2 mips 2.2.0-3 [56.7 kB]
+Get:41 http://ftp.de.debian.org/debian/ unstable/main fontconfig mips 2.8.0-3.1 [334 kB]
+Get:42 http://ftp.de.debian.org/debian/ unstable/main libpango1.0-0 mips 1.30.0-1 [440 kB]
+Get:43 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 mips 1:8.30-4 [125 kB]
+Get:44 http://ftp.de.debian.org/debian/ unstable/main libsm6 mips 2:1.2.1-2 [32.6 kB]
+Get:45 http://ftp.de.debian.org/debian/ unstable/main libtiff4 mips 3.9.6-2 [191 kB]
+Get:46 http://ftp.de.debian.org/debian/ unstable/main libunistring0 mips 0.9.3-5 [411 kB]
+Get:47 http://ftp.de.debian.org/debian/ unstable/main libxext6 mips 2:1.3.0-3 [48.4 kB]
+Get:48 http://ftp.de.debian.org/debian/ unstable/main libxss1 mips 1:1.2.1-2 [16.5 kB]
+Get:49 http://ftp.de.debian.org/debian/ unstable/main libxt6 mips 1:1.1.1-2 [189 kB]
+Get:50 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils mips 9.0.1 [207 kB]
+Get:51 http://ftp.de.debian.org/debian/ unstable/main groff-base mips 1.21-7 [1154 kB]
+Get:52 http://ftp.de.debian.org/debian/ unstable/main man-db mips 2.6.1-2 [1024 kB]
+Get:53 http://ftp.de.debian.org/debian/ unstable/main g++-4.6 mips 4.6.3-3 [6301 kB]
+Get:54 http://ftp.de.debian.org/debian/ unstable/main libstdc++6-4.6-dev mips 4.6.3-3 [1725 kB]
+Get:55 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6 mips 4.6.3-3 [4048 kB]
+Get:56 http://ftp.de.debian.org/debian/ unstable/main cpp-4.6 mips 4.6.3-3 [3771 kB]
+Get:57 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6-base mips 4.6.3-3 [140 kB]
+Get:58 http://ftp.de.debian.org/debian/ unstable/main file mips 5.11-1 [53.2 kB]
+Get:59 http://ftp.de.debian.org/debian/ unstable/main gettext-base mips 0.18.1.1-5 [136 kB]
+Get:60 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.109 [79.4 kB]
+Get:61 http://ftp.de.debian.org/debian/ unstable/main cpp mips 4:4.6.3-4 [16.3 kB]
+Get:62 http://ftp.de.debian.org/debian/ unstable/main html2text mips 1.3.2a-15 [103 kB]
+Get:63 http://ftp.de.debian.org/debian/ unstable/main gettext mips 0.18.1.1-5 [2032 kB]
+Get:64 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:65 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:66 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120410 [694 kB]
+Get:67 http://ftp.de.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
+Get:68 http://ftp.de.debian.org/debian/ unstable/main gcc mips 4:4.6.3-4 [5030 B]
+Get:69 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.6 mips 4.6.3-3 [4377 kB]
+Get:70 http://ftp.de.debian.org/debian/ unstable/main gfortran mips 4:4.6.3-4 [1134 B]
+Get:71 http://ftp.de.debian.org/debian/ unstable/main libblas3gf mips 1.2.20110419-2 [203 kB]
+Get:72 http://ftp.de.debian.org/debian/ unstable/main libblas-dev mips 1.2.20110419-2 [243 kB]
+Get:73 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev mips 1.0.6-1 [37.3 kB]
+Get:74 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev mips 8d-1 [258 kB]
+Get:75 http://ftp.de.debian.org/debian/ unstable/main liblapack3gf mips 3.3.1-1 [4250 kB]
+Get:76 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev mips 3.3.1-1 [4908 kB]
+Get:77 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev mips 5.9-6 [104 kB]
+Get:78 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev mips 5.9-6 [406 kB]
+Get:79 http://ftp.de.debian.org/debian/ unstable/main libpaper1 mips 1.1.24+nmu1 [21.3 kB]
+Get:80 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils mips 1.1.24+nmu1 [18.2 kB]
+Get:81 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev mips 1:8.30-4 [360 kB]
+Get:82 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev mips 1:1.2.6.dfsg-2 [211 kB]
+Get:83 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev mips 1.2.49-1 [275 kB]
+Get:84 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev mips 6.2-8 [270 kB]
+Get:85 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev mips 6.2-8 [890 B]
+Get:86 http://ftp.de.debian.org/debian/ unstable/main zip mips 3.0-4 [332 kB]
+Get:87 http://ftp.de.debian.org/debian/ unstable/main unzip mips 6.0-6 [188 kB]
+Get:88 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:89 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 mips 8.5.11-1 [1613 kB]
+Get:90 http://ftp.de.debian.org/debian/ unstable/main tk8.5 mips 8.5.11-1 [1173 kB]
+Get:91 http://ftp.de.debian.org/debian/ unstable/main r-base-core mips 2.15.0-1 [20.0 MB]
+Get:92 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 2.15.0-1 [3900 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 72.6 MB in 17s (4075 kB/s)
-(Reading database ... 10667 files and directories currently installed.)
-Preparing to replace libgomp1 4.6.2-12 (using .../libgomp1_4.6.3-1_mips.deb) ...
-Unpacking replacement libgomp1 ...
-Preparing to replace gcc-4.6-base 4.6.2-12 (using .../gcc-4.6-base_4.6.3-1_mips.deb) ...
-Unpacking replacement gcc-4.6-base ...
-Setting up gcc-4.6-base (4.6.3-1) ...
-(Reading database ... 10668 files and directories currently installed.)
-Preparing to replace libgcc1 1:4.6.2-12 (using .../libgcc1_1%3a4.6.3-1_mips.deb) ...
+Fetched 74.4 MB in 9s (7919 kB/s)
+(Reading database ... 10640 files and directories currently installed.)
+Preparing to replace ncurses-bin 5.9-4 (using .../ncurses-bin_5.9-6_mips.deb) ...
+Unpacking replacement ncurses-bin ...
+Setting up ncurses-bin (5.9-6) ...
+Selecting previously unselected package gcc-4.7-base.
+(Reading database ... 10640 files and directories currently installed.)
+Unpacking gcc-4.7-base (from .../gcc-4.7-base_4.7.0-2_mips.deb) ...
+Setting up gcc-4.7-base (4.7.0-2) ...
+(Reading database ... 10648 files and directories currently installed.)
+Preparing to replace libgcc1 1:4.6.2-12 (using .../libgcc1_1%3a4.7.0-2_mips.deb) ...
Unpacking replacement libgcc1 ...
-Setting up libgcc1 (1:4.6.3-1) ...
-(Reading database ... 10668 files and directories currently installed.)
-Preparing to replace cpp-4.6 4.6.2-12 (using .../cpp-4.6_4.6.3-1_mips.deb) ...
-Unpacking replacement cpp-4.6 ...
-Preparing to replace libstdc++6-4.6-dev 4.6.2-12 (using .../libstdc++6-4.6-dev_4.6.3-1_mips.deb) ...
-Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.2-12 (using .../g++-4.6_4.6.3-1_mips.deb) ...
-Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.2-12 (using .../gcc-4.6_4.6.3-1_mips.deb) ...
-Unpacking replacement gcc-4.6 ...
-Preparing to replace libstdc++6 4.6.2-12 (using .../libstdc++6_4.6.3-1_mips.deb) ...
+Setting up libgcc1 (1:4.7.0-2) ...
+(Reading database ... 10648 files and directories currently installed.)
+Preparing to replace libstdc++6 4.6.2-12 (using .../libstdc++6_4.7.0-2_mips.deb) ...
Unpacking replacement libstdc++6 ...
-Setting up libstdc++6 (4.6.3-1) ...
-(Reading database ... 10668 files and directories currently installed.)
+Setting up libstdc++6 (4.7.0-2) ...
+(Reading database ... 10648 files and directories currently installed.)
+Preparing to replace libtinfo5 5.9-4 (using .../libtinfo5_5.9-6_mips.deb) ...
+Unpacking replacement libtinfo5 ...
+Setting up libtinfo5 (5.9-6) ...
+(Reading database ... 10648 files and directories currently installed.)
+Preparing to replace libncurses5 5.9-4 (using .../libncurses5_5.9-6_mips.deb) ...
+Unpacking replacement libncurses5 ...
+Setting up libncurses5 (5.9-6) ...
+(Reading database ... 10648 files and directories currently installed.)
Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.6.dfsg-2_mips.deb) ...
Unpacking replacement zlib1g ...
Setting up zlib1g (1:1.2.6.dfsg-2) ...
Selecting previously unselected package libpipeline1.
-(Reading database ... 10668 files and directories currently installed.)
+(Reading database ... 10648 files and directories currently installed.)
Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_mips.deb) ...
Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_mips.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.11-1_mips.deb) ...
Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-4_mips.deb) ...
+Unpacking libpcre3 (from .../libpcre3_1%3a8.30-4_mips.deb) ...
Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_mips.deb) ...
+Unpacking libexpat1 (from .../libexpat1_2.1.0-1_mips.deb) ...
Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_mips.deb) ...
+Unpacking libfreetype6 (from .../libfreetype6_2.4.9-1_mips.deb) ...
+Selecting previously unselected package ucf.
+Unpacking ucf (from .../ucf_3.0025+nmu2_all.deb) ...
+Moving old data out of the way
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
@@ -344,41 +359,43 @@ Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_mips.deb) ...
Selecting previously unselected package libpixman-1-0.
Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_mips.deb) ...
Selecting previously unselected package libpng12-0.
-Unpacking libpng12-0 (from .../libpng12-0_1.2.47-1_mips.deb) ...
+Unpacking libpng12-0 (from .../libpng12-0_1.2.49-1_mips.deb) ...
Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_mips.deb) ...
+Unpacking libxau6 (from .../libxau6_1%3a1.0.7-1_mips.deb) ...
Selecting previously unselected package libxdmcp6.
Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_mips.deb) ...
Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_mips.deb) ...
+Unpacking libxcb1 (from .../libxcb1_1.8.1-1_mips.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
Selecting previously unselected package libx11-6.
Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_mips.deb) ...
Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_mips.deb) ...
+Unpacking libxcb-render0 (from .../libxcb-render0_1.8.1-1_mips.deb) ...
Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_mips.deb) ...
+Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8.1-1_mips.deb) ...
Selecting previously unselected package libxrender1.
Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_mips.deb) ...
Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_mips.deb) ...
+Unpacking libcairo2 (from .../libcairo2_1.12.0-2_mips.deb) ...
Selecting previously unselected package libffi5.
Unpacking libffi5 (from .../libffi5_3.0.10-3_mips.deb) ...
Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_mips.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.32.0-4_mips.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_mips.deb) ...
Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_mips.deb) ...
+Unpacking libcroco3 (from .../libcroco3_0.6.5-1_mips.deb) ...
Selecting previously unselected package libdatrie1.
Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_mips.deb) ...
Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_mips.deb) ...
+Unpacking libgfortran3 (from .../libgfortran3_4.7.0-2_mips.deb) ...
+Preparing to replace libgomp1 4.6.2-12 (using .../libgomp1_4.7.0-2_mips.deb) ...
+Unpacking replacement libgomp1 ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_mips.deb) ...
+Unpacking libice6 (from .../libice6_2%3a1.0.8-2_mips.deb) ...
Selecting previously unselected package libjpeg8.
Unpacking libjpeg8 (from .../libjpeg8_8d-1_mips.deb) ...
Selecting previously unselected package libthai-data.
@@ -390,13 +407,13 @@ Unpacking libxft2 (from .../libxft2_2.2.0-3_mips.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_mips.deb) ...
Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_mips.deb) ...
+Unpacking libpango1.0-0 (from .../libpango1.0-0_1.30.0-1_mips.deb) ...
Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_mips.deb) ...
+Unpacking libpcrecpp0 (from .../libpcrecpp0_1%3a8.30-4_mips.deb) ...
Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_mips.deb) ...
+Unpacking libsm6 (from .../libsm6_2%3a1.2.1-2_mips.deb) ...
Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_mips.deb) ...
+Unpacking libtiff4 (from .../libtiff4_3.9.6-2_mips.deb) ...
Selecting previously unselected package libunistring0.
Unpacking libunistring0 (from .../libunistring0_0.9.3-5_mips.deb) ...
Selecting previously unselected package libxext6.
@@ -408,15 +425,27 @@ Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_mips.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_mips.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6_mips.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-7_mips.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_mips.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_mips.deb) ...
+Preparing to replace g++-4.6 4.6.2-12 (using .../g++-4.6_4.6.3-3_mips.deb) ...
+Unpacking replacement g++-4.6 ...
+Preparing to replace libstdc++6-4.6-dev 4.6.2-12 (using .../libstdc++6-4.6-dev_4.6.3-3_mips.deb) ...
+Unpacking replacement libstdc++6-4.6-dev ...
+Preparing to replace gcc-4.6 4.6.2-12 (using .../gcc-4.6_4.6.3-3_mips.deb) ...
+Unpacking replacement gcc-4.6 ...
+Preparing to replace cpp-4.6 4.6.2-12 (using .../cpp-4.6_4.6.3-3_mips.deb) ...
+Unpacking replacement cpp-4.6 ...
+Preparing to replace gcc-4.6-base 4.6.2-12 (using .../gcc-4.6-base_4.6.3-3_mips.deb) ...
+Unpacking replacement gcc-4.6-base ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.10-1_mips.deb) ...
+Unpacking file (from .../archives/file_5.11-1_mips.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_mips.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
+Preparing to replace cpp 4:4.6.2-4 (using .../cpp_4%3a4.6.3-4_mips.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mips.deb) ...
Selecting previously unselected package gettext.
@@ -426,13 +455,16 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
+Preparing to replace gcc 4:4.6.2-4 (using .../gcc_4%3a4.6.3-4_mips.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_mips.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-3_mips.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_mips.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_mips.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_mips.deb) ...
Selecting previously unselected package libblas-dev.
@@ -446,19 +478,19 @@ Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_mips.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_mips.deb) ...
Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_mips.deb) ...
+Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-6_mips.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_mips.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_mips.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_mips.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_mips.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_mips.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_mips.deb) ...
Selecting previously unselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_mips.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_mips.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_mips.deb) ...
Selecting previously unselected package libreadline6-dev.
Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_mips.deb) ...
Selecting previously unselected package libreadline-dev.
@@ -466,7 +498,7 @@ Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_mips.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../archives/zip_3.0-4_mips.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../archives/unzip_6.0-5_mips.deb) ...
+Unpacking unzip (from .../archives/unzip_6.0-6_mips.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -474,42 +506,41 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_mips.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_mips.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_mips.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_mips.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libgomp1 (4.6.3-1) ...
-Setting up cpp-4.6 (4.6.3-1) ...
-Setting up gcc-4.6 (4.6.3-1) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libpcre3 (8.12-4) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Setting up libmagic1 (5.11-1) ...
+Setting up libpcre3 (1:8.30-4) ...
+Setting up libexpat1 (2.1.0-1) ...
+Setting up libfreetype6 (2.4.9-1) ...
+Setting up ucf (3.0025+nmu2) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
Setting up libfontconfig1 (2.8.0-3.1) ...
Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libpng12-0 (1.2.47-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
+Setting up libpng12-0 (1.2.49-1) ...
+Setting up libxau6 (1:1.0.7-1) ...
Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libxcb1 (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
+Setting up libxcb-render0 (1.8.1-1) ...
+Setting up libxcb-shm0 (1.8.1-1) ...
Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
+Setting up libcairo2 (1.12.0-2) ...
Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libglib2.0-0 (2.32.0-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
+Setting up libcroco3 (0.6.5-1) ...
Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libgfortran3 (4.7.0-2) ...
+Setting up libgomp1 (4.7.0-2) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
+Setting up libice6 (2:1.0.8-2) ...
Setting up libjpeg8 (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
Setting up libthai0 (0.1.17-1) ...
@@ -517,10 +548,10 @@ Setting up libxft2 (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
+Setting up libpango1.0-0 (1.30.0-1) ...
+Setting up libpcrecpp0 (1:8.30-4) ...
+Setting up libsm6 (2:1.2.1-2) ...
+Setting up libtiff4 (3.9.6-2) ...
Setting up libunistring0 (0.9.3-5) ...
Setting up libxext6 (2:1.3.0-3) ...
Setting up libxss1 (1:1.2.1-2) ...
@@ -528,20 +559,25 @@ Setting up libxt6 (1:1.1.1-2) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.1-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up gcc-4.6-base (4.6.3-3) ...
+Setting up cpp-4.6 (4.6.3-3) ...
+Setting up gcc-4.6 (4.6.3-3) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
+Setting up cpp (4:4.6.3-4) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gcc (4:4.6.3-4) ...
+Setting up gfortran-4.6 (4.6.3-3) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
@@ -553,40 +589,40 @@ Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
+Setting up libpcre3-dev (1:8.30-4) ...
Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
+Setting up libpng12-dev (1.2.49-1) ...
Setting up libreadline6-dev (6.2-8) ...
Setting up libreadline-dev (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
-Setting up libstdc++6-4.6-dev (4.6.3-1) ...
-Setting up g++-4.6 (4.6.3-1) ...
+Setting up r-base-dev (2.15.0-1) ...
+Setting up g++-4.6 (4.6.3-3) ...
+Setting up libstdc++6-4.6-dev (4.6.3-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 35 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 58 not upgraded.
Checking correctness of dependencies...
-Kernel: Linux 3.2.0-0.bpo.1-octeon mips (mips64)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-26 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.4-1
-Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-26 libc-dev-bin_2.13-26 libc6_2.13-26 libc6-dev_2.13-26 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.3+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libncurses5-dev_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42-1 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.4-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-26 ncurses-base_5.9-4 ncurses-bin_5.9-4 netbase_4.47 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-7 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-1.2 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: Linux 2.6.32-5-sb1-bcm91250a mips (mips64)
+Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-24 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.1-2
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.1 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-2 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-7 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-18 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-24 libc-dev-bin_2.13-24 libc6_2.13-24 libc6-dev_2.13-24 libcairo2_1.12.0-2 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-2 libgdbm3_1.8.3-10 libgfortran3_4.7.0-2 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.2+dfsg-2 libgomp1_4.7.0-2 libice6_2:1.0.8-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-6 libncurses5-dev_5.9-6 libpam-modules_1.1.3-6 libpam-modules-bin_1.1.3-6 libpam-runtime_1.1.3-6 libpam0g_1.1.3-6 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-5 libsm6_2:1.2.1-2 libss2_1.42-1 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.1-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-24 ncurses-base_5.9-4 ncurses-bin_5.9-6 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-6 perl-base_5.14.2-6 perl-modules_5.14.2-6 po-debconf_1.0.16+nmu2 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p1-3 sysv-rc_2.88dsf-18 sysvinit_2.88dsf-18 sysvinit-utils_2.88dsf-18 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-1.2 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -596,13 +632,13 @@ Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binu
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd2/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -612,18 +648,18 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture mips
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -658,9 +694,9 @@ test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -668,9 +704,9 @@ if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -684,44 +720,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -g0 -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g0 -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/src'
-installing to /build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -758,9 +794,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
- gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
- cd '/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL/r-bioc-limma-3.10.3'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -785,72 +821,67 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_mips.deb'.
- dpkg-genchanges -B -mmips Build Daemon (corelli) <buildd_mips-corelli2 at buildd.debian.org> >../r-bioc-limma_3.10.3-1_mips.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_mips.deb'.
+ dpkg-genchanges -B -mDebian Build Daemon <buildd_mips-ball at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_mips.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0522
+Build finished at 20120412-0501
-r-bioc-limma_3.10.3-1_mips.changes:
+r-bioc-limma_3.12.0~dfsg-1_mips.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: mips
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: mips Build Daemon (corelli) <buildd_mips-corelli2 at buildd.debian.org>
+Maintainer: Debian Build Daemon <buildd_mips-ball at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 63dcf853a5867956e3aadec7b331ebca78f3ce5f 1474740 r-bioc-limma_3.10.3-1_mips.deb
+ 1edf8622d3f6c1812c33320e3945b7bf61773196 807418 r-bioc-limma_3.12.0~dfsg-1_mips.deb
Checksums-Sha256:
- 02fd5412d21c3ed0e4c198e5337f7a1141e8d208bdf2ca6eec651a4b49f24880 1474740 r-bioc-limma_3.10.3-1_mips.deb
+ f86fb0db3bbf93f0adbfefc6ffa098b083dbccf2d9b160e55820f39f685d7023 807418 r-bioc-limma_3.12.0~dfsg-1_mips.deb
Files:
- fed7f519488d4793c1eb6618e987edee 1474740 gnu-r optional r-bioc-limma_3.10.3-1_mips.deb
+ c0650fcfa558cce7ff8e3c5b2420b764 807418 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_mips.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_mips.deb
-──────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_mips.deb
+───────────────────────────────────
new debian package, version 2.0.
- size 1474740 bytes: control archive= 1570 bytes.
- 768 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 807418 bytes: control archive= 1542 bytes.
+ 772 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: mips
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1681
- Depends: libc6 (>= 2.2), r-base-core (>= 2.14.2-1)
+ Installed-Size: 985
+ Depends: libc6 (>= 2.2), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -862,52 +893,51 @@ r-bioc-limma_3.10.3-1_mips.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 05:21 ./
-drwxr-xr-x root/root 0 2012-03-07 05:21 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 05:21 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 05:21 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 05:21 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 560 2012-03-07 05:18 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 264 2012-03-07 05:18 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2302 2012-03-07 05:18 ./usr/share/doc/r-bioc-limma/copyright
-drwxr-xr-x root/root 0 2012-03-07 05:19 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 05:19 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 05:21 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 05:21 ./usr/lib/R/site-library/limma/
-drwxr-xr-x root/root 0 2012-03-07 05:21 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10704 2012-03-07 05:21 ./usr/lib/R/site-library/limma/libs/limma.so
--rw-r--r-- root/root 969 2012-03-07 05:19 ./usr/lib/R/site-library/limma/DESCRIPTION
--rw-r--r-- root/root 1901 2012-03-07 05:19 ./usr/lib/R/site-library/limma/NAMESPACE
--rwxr-xr-x root/root 1230 2012-03-07 05:19 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2012-03-07 05:20 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2012-03-07 05:20 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 34556 2012-03-07 05:20 ./usr/lib/R/site-library/limma/html/00Index.html
-drwxr-xr-x root/root 0 2012-03-07 05:20 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1350 2012-03-07 05:20 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 458605 2012-03-07 05:20 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3272 2012-03-07 05:20 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6221 2012-03-07 05:20 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2392 2012-03-07 05:20 ./usr/lib/R/site-library/limma/help/aliases.rds
-drwxr-xr-x root/root 0 2012-03-07 05:19 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 198254 2012-03-07 05:19 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 383 2012-03-07 05:19 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 3775 2012-03-07 05:19 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2012-03-07 05:21 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 216 2012-03-07 05:21 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 2886 2012-03-07 05:21 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 5603 2012-03-07 05:21 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 6022 2012-03-07 05:20 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 1054 2012-03-07 05:19 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 518 2012-03-07 05:21 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
-drwxr-xr-x root/root 0 2012-03-07 05:21 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 89361 2012-03-07 05:19 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 737677 2012-03-07 05:19 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 42743 2012-03-07 05:19 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rwxr-xr-x root/root 673 2012-03-07 05:19 ./usr/lib/R/site-library/limma/doc/index.html
--rwxr-xr-x root/root 1711 2012-03-07 05:19 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 9458 2012-03-07 05:21 ./usr/lib/R/site-library/limma/INDEX
--rw-r--r-- root/root 2173 2012-03-07 05:19 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2012-04-12 05:01 ./
+drwxr-xr-x root/root 0 2012-04-12 05:01 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 05:01 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 05:01 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 05:01 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 2457 2012-04-12 04:59 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 27998 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 264 2012-04-12 04:59 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 683 2012-04-12 04:59 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-12 05:00 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 05:00 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 05:01 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 05:01 ./usr/lib/R/site-library/limma/
+drwxr-xr-x root/root 0 2012-04-12 05:00 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 3827 2012-04-12 05:00 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 383 2012-04-12 05:00 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 202046 2012-04-12 05:00 ./usr/lib/R/site-library/limma/R/limma.rdb
+drwxr-xr-x root/root 0 2012-04-12 05:01 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 91993 2012-04-12 05:00 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rwxr-xr-x root/root 1711 2012-04-12 05:00 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rwxr-xr-x root/root 673 2012-04-12 05:00 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 42743 2012-04-12 05:00 ./usr/lib/R/site-library/limma/doc/limma.pdf
+drwxr-xr-x root/root 0 2012-04-12 05:01 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 220 2012-04-12 05:01 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 5727 2012-04-12 05:01 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 6157 2012-04-12 05:01 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 2943 2012-04-12 05:01 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 521 2012-04-12 05:01 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 1055 2012-04-12 05:00 ./usr/lib/R/site-library/limma/Meta/package.rds
+drwxr-xr-x root/root 0 2012-04-12 05:00 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 3359 2012-04-12 05:00 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 1371 2012-04-12 05:00 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 2431 2012-04-12 05:00 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 6317 2012-04-12 05:00 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 472530 2012-04-12 05:00 ./usr/lib/R/site-library/limma/help/limma.rdb
+drwxr-xr-x root/root 0 2012-04-12 05:00 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2012-04-12 05:00 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 35015 2012-04-12 05:00 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 9754 2012-04-12 05:01 ./usr/lib/R/site-library/limma/INDEX
+-rwxr-xr-x root/root 1230 2012-04-12 05:00 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2012-04-12 05:01 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 10704 2012-04-12 05:01 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 3989 2012-04-12 05:00 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 969 2012-04-12 05:00 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 1901 2012-04-12 05:00 ./usr/lib/R/site-library/limma/NAMESPACE
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -921,203 +951,97 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mips-sbuild-7fb8acfd-bd20-4418-8fb0-00d0ea702eba/build/buildd2-r-bioc-limma_3.10.3-1-mips-ohdEUL
+Purging /var/lib/schroot/mount/sid-mips-sbuild-630c4b5b-e203-46f1-8e4a-fe4e56945a3e/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mips-IcD0GQ
Not cleaning session: cloned chroot in use
-Can't open average time db /var/lib/sbuild/avg-build-times
-Can't open average space db /var/lib/sbuild/avg-build-space
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: mips
-Build-Space: 5336
-Build-Time: 224
+Build-Space: 3272
+Build-Time: 110
Distribution: sid
-Install-Time: 195
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 322
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 566
-Source-Version: 3.10.3-1
-Space: 5336
+Package-Time: 597
+Source-Version: 3.12.0~dfsg-1
+Space: 3272
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0522
-Build needed 00:09:26, 5336k disc space
-Signature with key 'B5319330' requested:
+Finished at 20120412-0501
+Build needed 00:09:57, 3272k disc space
+Signature with key 'E348DA45' requested:
-From buildd at mayer.debian.org Wed Mar 07 06:07:33 2012
-Return-path: <buildd at mayer.debian.org>
+From buildd at eysler.debian.org Thu Apr 12 05:09:35 2012
+Return-path: <buildd at eysler.debian.org>
Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=kokkonen.debian.org,
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at mayer.debian.org>)
- id 1S5A29-00085g-CU
- for logs at buildd.debian.org; Wed, 07 Mar 2012 06:07:33 +0000
-Received: from mayer.debian.org ([140.211.166.78])
+ (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
+ id 1SICHn-0001fs-2M
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 05:09:35 +0000
+Received: from eysler.debian.org ([2001:858:2:2:1a1a:0:563b:7698])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=mayer.debian.org, EMAIL=hostmaster at mayer.debian.org (verified)
+ CN=eysler.debian.org, EMAIL=hostmaster at eysler.debian.org (verified)
by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at mayer.debian.org>)
- id 1S5A27-00020P-EJ
- for logs at buildd.debian.org; Wed, 07 Mar 2012 06:07:32 +0000
-Received: from buildd by mayer.debian.org with local (Exim 4.72)
- (envelope-from <buildd at mayer.debian.org>) id 1S5A25-0007NC-7p
- for logs at buildd.debian.org; Wed, 07 Mar 2012 06:07:29 +0000
-Date: Wed, 07 Mar 2012 06:07:29 +0000
-Message-Id: <E1S5A25-0007NC-7p at mayer.debian.org>
-From: buildd on mayer <buildd at mayer.debian.org>
+ (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
+ id 1SICHm-0002uY-1a
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 05:09:34 +0000
+Received: from buildd by eysler.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at eysler.debian.org>) id 1SICHj-0003MN-GL
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 05:09:31 +0000
+Date: Thu, 12 Apr 2012 05:09:31 +0000
+Message-Id: <E1SICHj-0003MN-GL at eysler.debian.org>
+From: buildd on eysler <buildd at eysler.debian.org>
To: logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on mipsel (dist=sid)
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on mipsel
+ (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on mayer.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on eysler.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (mipsel) 07 Mar 2012 06:02 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (mipsel) 12 Apr 2012 04:59 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: mipsel
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Hit http://debian.oregonstate.edu sid InRelease
-Hit http://debian.oregonstate.edu sid/main Sources
-Hit http://debian.oregonstate.edu sid/contrib Sources
-Hit http://debian.oregonstate.edu sid/main mipsel Packages
-Hit http://debian.oregonstate.edu sid/contrib mipsel Packages
-Ign http://debian.oregonstate.edu sid/contrib TranslationIndex
-Hit http://debian.oregonstate.edu sid/main TranslationIndex
-Hit http://debian.oregonstate.edu sid/contrib Translation-en
-Hit http://debian.oregonstate.edu sid/main Translation-en
-Hit http://incoming.debian.org sid InRelease
+Get:1 http://ftp.at.debian.org unstable InRelease [208 kB]
+Get:2 http://incoming.debian.org unstable InRelease [208 kB]
+Get:3 http://ftp.at.debian.org unstable/main Sources [6221 kB]
Ign http://incoming.debian.org InRelease
-Hit http://incoming.debian.org Release.gpg
-Hit http://incoming.debian.org sid/main Sources
-Hit http://incoming.debian.org sid/contrib Sources
-Hit http://incoming.debian.org sid/main mipsel Packages
-Hit http://incoming.debian.org sid/contrib mipsel Packages
-Ign http://incoming.debian.org sid/contrib TranslationIndex
-Hit http://incoming.debian.org sid/main TranslationIndex
-Hit http://incoming.debian.org Release
-Hit http://incoming.debian.org sid/contrib Translation-en
-Hit http://incoming.debian.org sid/main Translation-en
-Hit http://incoming.debian.org Sources
-Hit http://incoming.debian.org Packages
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org Release [1601 B]
+Get:6 http://incoming.debian.org unstable/main Sources [6221 kB]
+Get:7 http://ftp.at.debian.org unstable/contrib Sources [54.5 kB]
+Get:8 http://ftp.at.debian.org unstable/non-free Sources [97.7 kB]
+Get:9 http://ftp.at.debian.org unstable/main mipsel Packages [5836 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [54.5 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [97.7 kB]
+Get:12 http://incoming.debian.org unstable/main mipsel Packages [5836 kB]
+Get:13 http://ftp.at.debian.org unstable/contrib mipsel Packages [37.3 kB]
+Ign http://ftp.at.debian.org unstable/contrib TranslationIndex
+Get:14 http://ftp.at.debian.org unstable/main TranslationIndex [2223 B]
+Get:15 http://ftp.at.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:16 http://ftp.at.debian.org unstable/main Translation-en [3936 kB]
+Get:17 http://incoming.debian.org unstable/contrib mipsel Packages [37.3 kB]
+Ign http://incoming.debian.org unstable/contrib TranslationIndex
+Get:18 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:19 http://incoming.debian.org Sources [42.8 kB]
+Get:20 http://incoming.debian.org Packages [744 kB]
+Get:21 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:22 http://incoming.debian.org unstable/main Translation-en [3936 kB]
Ign http://incoming.debian.org Translation-en
+Fetched 33.6 MB in 1min 38s (342 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1129,92 +1053,20 @@ Check APT
─────────
Checking available source versions...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Download source files with APT
──────────────────────────────
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 1s (698 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 1s (207 kB/s)
Download complete and in download only mode
Check arch
@@ -1227,200 +1079,20 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
build-essential: already installed (11.5)
fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Installing positive dependencies:
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 68 not upgraded.
Removing negative dependencies:
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 68 not upgraded.
Checking correctness of dependencies...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install r-bioc-limma build dependencies (internal resolver) │
@@ -1428,42 +1100,6 @@ I: This option will be removed in the future; please update your configuration
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
Checking for already installed dependencies...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
base-files: already installed (6.5)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-1)
@@ -1472,14 +1108,14 @@ dash: already installed (0.5.7-2)
debianutils: already installed (4.2.1)
diffutils: already installed (1:3.2-1)
dpkg: already installed (1.16.1.2)
-e2fsprogs: already installed (1.42.1-2)
+e2fsprogs: already installed (1.42-1)
findutils: already installed (4.4.2-4)
grep: already installed (2.10-1)
gzip: already installed (1.4-2)
hostname: already installed (3.10)
ncurses-base: already installed (5.9-4)
ncurses-bin: already installed (5.9-4)
-perl-base: already installed (5.14.2-9)
+perl-base: already installed (5.14.2-7)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
sysvinit-utils: already installed (2.88dsf-22)
@@ -1488,148 +1124,205 @@ tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-1.2)
mount: already installed (2.20.1-1.2)
util-linux: already installed (2.20.1-1.2)
-libc6-dev: already installed (2.13-27)
+libc6-dev: already installed (2.13-26)
gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Installing positive dependencies: debhelper cdbs r-base-dev
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- dpatch file fontconfig fontconfig-config gettext gettext-base gfortran
+ bsdmainutils cpp cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
+ gcc gcc-4.6 gcc-4.6-base gcc-4.7-base gettext gettext-base gfortran
gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf
libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1
- libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
- libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
- libtiff4 libtinfo-dev libunistring0 libx11-6 libx11-data libxau6
- libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
- libxrender1 libxss1 libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5
- ttf-dejavu-core unzip x11-common xdg-utils zip zlib1g-dev
+ libfreetype6 libgcc1 libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5
+ libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev
+ libthai-data libthai0 libtiff4 libtinfo-dev libtinfo5 libunistring0 libx11-6
+ libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
+ libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
+ r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip
+ zlib1g zlib1g-dev
Suggested packages:
- devscripts dh-make curl defoma gettext-doc gfortran-multilib gfortran-doc
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ curl defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib
+ manpages-dev autoconf automake1.9 libtool flex bison gdb gcc-doc
+ gcc-4.6-multilib libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg
+ libquadmath-dbg libmudflap0-dbg gettext-doc gfortran-multilib gfortran-doc
gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp less www-browser libmail-box-perl r-doc-info r-doc-pdf
- r-mathlib r-base-html texlive-base texlive-latex-base
+ ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info libgpm2
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
- libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-dev libreadline-dev libreadline6-dev libsm6
- libthai-data libthai0 libtiff4 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip
- zlib1g-dev
-0 upgraded, 73 newly installed, 0 to remove and 20 not upgraded.
-Need to get 19.7 MB/55.5 MB of archives.
-After this operation, 120 MB of additional disk space will be used.
-Get:1 http://debian.oregonstate.edu/debian/ sid/main r-base-core mipsel 2.14.2-1 [19.7 MB]
-Get:2 http://debian.oregonstate.edu/debian/ sid/main r-base-dev all 2.14.2-1 [3894 B]
+ bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config
+ gcc-4.7-base gettext gettext-base gfortran gfortran-4.6 groff-base html2text
+ intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgfortran3
+ libglib2.0-0 libice6 libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf
+ libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3
+ libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4
+ libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
+ libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
+ libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core
+ unzip x11-common xdg-utils zip zlib1g-dev
+The following packages will be upgraded:
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base libgcc1 libgomp1 libncurses5
+ libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin zlib1g
+14 upgraded, 77 newly installed, 0 to remove and 54 not upgraded.
+Need to get 74.2 MB of archives.
+After this operation, 121 MB of additional disk space will be used.
+Get:1 http://ftp.at.debian.org/debian/ unstable/main ncurses-bin mipsel 5.9-6 [329 kB]
+Get:2 http://ftp.at.debian.org/debian/ unstable/main gcc-4.7-base mipsel 4.7.0-2 [139 kB]
+Get:3 http://ftp.at.debian.org/debian/ unstable/main libgcc1 mipsel 1:4.7.0-2 [69.1 kB]
+Get:4 http://ftp.at.debian.org/debian/ unstable/main libstdc++6 mipsel 4.7.0-2 [305 kB]
+Get:5 http://ftp.at.debian.org/debian/ unstable/main libtinfo5 mipsel 5.9-6 [265 kB]
+Get:6 http://ftp.at.debian.org/debian/ unstable/main libncurses5 mipsel 5.9-6 [284 kB]
+Get:7 http://ftp.at.debian.org/debian/ unstable/main zlib1g mipsel 1:1.2.6.dfsg-2 [85.7 kB]
+Get:8 http://ftp.at.debian.org/debian/ unstable/main libpipeline1 mipsel 1.2.1-1 [36.7 kB]
+Get:9 http://ftp.at.debian.org/debian/ unstable/main libmagic1 mipsel 5.11-1 [251 kB]
+Get:10 http://ftp.at.debian.org/debian/ unstable/main libpcre3 mipsel 1:8.30-4 [245 kB]
+Get:11 http://ftp.at.debian.org/debian/ unstable/main libexpat1 mipsel 2.1.0-1 [144 kB]
+Get:12 http://ftp.at.debian.org/debian/ unstable/main libfreetype6 mipsel 2.4.9-1 [434 kB]
+Get:13 http://ftp.at.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:14 http://ftp.at.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:15 http://ftp.at.debian.org/debian/ unstable/main libfontconfig1 mipsel 2.8.0-3.1 [285 kB]
+Get:16 http://ftp.at.debian.org/debian/ unstable/main libpixman-1-0 mipsel 0.24.4-1 [362 kB]
+Get:17 http://ftp.at.debian.org/debian/ unstable/main libpng12-0 mipsel 1.2.49-1 [185 kB]
+Get:18 http://ftp.at.debian.org/debian/ unstable/main libxau6 mipsel 1:1.0.7-1 [18.2 kB]
+Get:19 http://ftp.at.debian.org/debian/ unstable/main libxdmcp6 mipsel 1:1.1.0-4 [22.4 kB]
+Get:20 http://ftp.at.debian.org/debian/ unstable/main libxcb1 mipsel 1.8.1-1 [41.0 kB]
+Get:21 http://ftp.at.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
+Get:22 http://ftp.at.debian.org/debian/ unstable/main libx11-6 mipsel 2:1.4.4-4 [857 kB]
+Get:23 http://ftp.at.debian.org/debian/ unstable/main libxcb-render0 mipsel 1.8.1-1 [16.1 kB]
+Get:24 http://ftp.at.debian.org/debian/ unstable/main libxcb-shm0 mipsel 1.8.1-1 [9950 B]
+Get:25 http://ftp.at.debian.org/debian/ unstable/main libxrender1 mipsel 1:0.9.6-2 [30.2 kB]
+Get:26 http://ftp.at.debian.org/debian/ unstable/main libcairo2 mipsel 1.12.0-2 [904 kB]
+Get:27 http://ftp.at.debian.org/debian/ unstable/main libffi5 mipsel 3.0.10-3 [22.8 kB]
+Get:28 http://ftp.at.debian.org/debian/ unstable/main libglib2.0-0 mipsel 2.32.0-3 [1960 kB]
+Get:29 http://ftp.at.debian.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-7 [859 kB]
+Get:30 http://ftp.at.debian.org/debian/ unstable/main libcroco3 mipsel 0.6.5-1 [139 kB]
+Get:31 http://ftp.at.debian.org/debian/ unstable/main libdatrie1 mipsel 0.2.5-3 [28.1 kB]
+Get:32 http://ftp.at.debian.org/debian/ unstable/main libgfortran3 mipsel 4.7.0-2 [240 kB]
+Get:33 http://ftp.at.debian.org/debian/ unstable/main libgomp1 mipsel 4.7.0-2 [28.8 kB]
+Get:34 http://ftp.at.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
+Get:35 http://ftp.at.debian.org/debian/ unstable/main libice6 mipsel 2:1.0.8-2 [56.7 kB]
+Get:36 http://ftp.at.debian.org/debian/ unstable/main libjpeg8 mipsel 8d-1 [145 kB]
+Get:37 http://ftp.at.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
+Get:38 http://ftp.at.debian.org/debian/ unstable/main libthai0 mipsel 0.1.17-1 [43.5 kB]
+Get:39 http://ftp.at.debian.org/debian/ unstable/main libxft2 mipsel 2.2.0-3 [56.8 kB]
+Get:40 http://ftp.at.debian.org/debian/ unstable/main fontconfig mipsel 2.8.0-3.1 [334 kB]
+Get:41 http://ftp.at.debian.org/debian/ unstable/main libpango1.0-0 mipsel 1.30.0-1 [439 kB]
+Get:42 http://ftp.at.debian.org/debian/ unstable/main libpcrecpp0 mipsel 1:8.30-4 [125 kB]
+Get:43 http://ftp.at.debian.org/debian/ unstable/main libsm6 mipsel 2:1.2.1-2 [32.5 kB]
+Get:44 http://ftp.at.debian.org/debian/ unstable/main libtiff4 mipsel 3.9.6-2 [192 kB]
+Get:45 http://ftp.at.debian.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
+Get:46 http://ftp.at.debian.org/debian/ unstable/main libxext6 mipsel 2:1.3.0-3 [48.8 kB]
+Get:47 http://ftp.at.debian.org/debian/ unstable/main libxss1 mipsel 1:1.2.1-2 [16.5 kB]
+Get:48 http://ftp.at.debian.org/debian/ unstable/main libxt6 mipsel 1:1.1.1-2 [189 kB]
+Get:49 http://ftp.at.debian.org/debian/ unstable/main bsdmainutils mipsel 9.0.1 [206 kB]
+Get:50 http://ftp.at.debian.org/debian/ unstable/main groff-base mipsel 1.21-7 [1106 kB]
+Get:51 http://ftp.at.debian.org/debian/ unstable/main man-db mipsel 2.6.1-2 [1026 kB]
+Get:52 http://ftp.at.debian.org/debian/ unstable/main g++-4.6 mipsel 4.6.3-2 [6334 kB]
+Get:53 http://ftp.at.debian.org/debian/ unstable/main libstdc++6-4.6-dev mipsel 4.6.3-2 [1671 kB]
+Get:54 http://ftp.at.debian.org/debian/ unstable/main gcc-4.6 mipsel 4.6.3-2 [4062 kB]
+Get:55 http://ftp.at.debian.org/debian/ unstable/main cpp-4.6 mipsel 4.6.3-2 [3789 kB]
+Get:56 http://ftp.at.debian.org/debian/ unstable/main gcc-4.6-base mipsel 4.6.3-2 [139 kB]
+Get:57 http://ftp.at.debian.org/debian/ unstable/main file mipsel 5.11-1 [53.0 kB]
+Get:58 http://ftp.at.debian.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-5 [133 kB]
+Get:59 http://ftp.at.debian.org/debian/ unstable/main cdbs all 0.4.109 [79.4 kB]
+Get:60 http://ftp.at.debian.org/debian/ unstable/main cpp mipsel 4:4.6.3-4 [16.3 kB]
+Get:61 http://ftp.at.debian.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
+Get:62 http://ftp.at.debian.org/debian/ unstable/main gettext mipsel 0.18.1.1-5 [2008 kB]
+Get:63 http://ftp.at.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:64 http://ftp.at.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:65 http://ftp.at.debian.org/debian/ unstable/main debhelper all 9.20120410 [694 kB]
+Get:66 http://ftp.at.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
+Get:67 http://ftp.at.debian.org/debian/ unstable/main gcc mipsel 4:4.6.3-4 [5026 B]
+Get:68 http://ftp.at.debian.org/debian/ unstable/main gfortran-4.6 mipsel 4.6.3-2 [4390 kB]
+Get:69 http://ftp.at.debian.org/debian/ unstable/main gfortran mipsel 4:4.6.3-4 [1134 B]
+Get:70 http://ftp.at.debian.org/debian/ unstable/main libblas3gf mipsel 1.2.20110419-2 [203 kB]
+Get:71 http://ftp.at.debian.org/debian/ unstable/main libblas-dev mipsel 1.2.20110419-2 [244 kB]
+Get:72 http://ftp.at.debian.org/debian/ unstable/main libbz2-dev mipsel 1.0.6-1 [37.2 kB]
+Get:73 http://ftp.at.debian.org/debian/ unstable/main libjpeg8-dev mipsel 8d-1 [257 kB]
+Get:74 http://ftp.at.debian.org/debian/ unstable/main liblapack3gf mipsel 3.3.1-1 [4277 kB]
+Get:75 http://ftp.at.debian.org/debian/ unstable/main liblapack-dev mipsel 3.3.1-1 [4906 kB]
+Get:76 http://ftp.at.debian.org/debian/ unstable/main libtinfo-dev mipsel 5.9-6 [102 kB]
+Get:77 http://ftp.at.debian.org/debian/ unstable/main libncurses5-dev mipsel 5.9-6 [403 kB]
+Get:78 http://ftp.at.debian.org/debian/ unstable/main libpaper1 mipsel 1.1.24+nmu1 [21.2 kB]
+Get:79 http://ftp.at.debian.org/debian/ unstable/main libpaper-utils mipsel 1.1.24+nmu1 [18.2 kB]
+Get:80 http://ftp.at.debian.org/debian/ unstable/main libpcre3-dev mipsel 1:8.30-4 [357 kB]
+Get:81 http://ftp.at.debian.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.6.dfsg-2 [212 kB]
+Get:82 http://ftp.at.debian.org/debian/ unstable/main libpng12-dev mipsel 1.2.49-1 [275 kB]
+Get:83 http://ftp.at.debian.org/debian/ unstable/main libreadline6-dev mipsel 6.2-8 [270 kB]
+Get:84 http://ftp.at.debian.org/debian/ unstable/main libreadline-dev mipsel 6.2-8 [892 B]
+Get:85 http://ftp.at.debian.org/debian/ unstable/main zip mipsel 3.0-4 [334 kB]
+Get:86 http://ftp.at.debian.org/debian/ unstable/main unzip mipsel 6.0-6 [189 kB]
+Get:87 http://ftp.at.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:88 http://ftp.at.debian.org/debian/ unstable/main tcl8.5 mipsel 8.5.11-1 [1613 kB]
+Get:89 http://ftp.at.debian.org/debian/ unstable/main tk8.5 mipsel 8.5.11-1 [1170 kB]
+Get:90 http://ftp.at.debian.org/debian/ unstable/main r-base-core mipsel 2.15.0-1 [19.9 MB]
+Get:91 http://ftp.at.debian.org/debian/ unstable/main r-base-dev all 2.15.0-1 [3900 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 19.7 MB in 2s (9562 kB/s)
+Fetched 74.2 MB in 21s (3414 kB/s)
+(Reading database ... 10674 files and directories currently installed.)
+Preparing to replace ncurses-bin 5.9-4 (using .../ncurses-bin_5.9-6_mipsel.deb) ...
+Unpacking replacement ncurses-bin ...
+Setting up ncurses-bin (5.9-6) ...
+Selecting previously unselected package gcc-4.7-base.
+(Reading database ... 10674 files and directories currently installed.)
+Unpacking gcc-4.7-base (from .../gcc-4.7-base_4.7.0-2_mipsel.deb) ...
+Setting up gcc-4.7-base (4.7.0-2) ...
+(Reading database ... 10682 files and directories currently installed.)
+Preparing to replace libgcc1 1:4.6.2-12 (using .../libgcc1_1%3a4.7.0-2_mipsel.deb) ...
+Unpacking replacement libgcc1 ...
+Setting up libgcc1 (1:4.7.0-2) ...
+(Reading database ... 10682 files and directories currently installed.)
+Preparing to replace libstdc++6 4.6.2-12 (using .../libstdc++6_4.7.0-2_mipsel.deb) ...
+Unpacking replacement libstdc++6 ...
+Setting up libstdc++6 (4.7.0-2) ...
+(Reading database ... 10682 files and directories currently installed.)
+Preparing to replace libtinfo5 5.9-4 (using .../libtinfo5_5.9-6_mipsel.deb) ...
+Unpacking replacement libtinfo5 ...
+Setting up libtinfo5 (5.9-6) ...
+(Reading database ... 10682 files and directories currently installed.)
+Preparing to replace libncurses5 5.9-4 (using .../libncurses5_5.9-6_mipsel.deb) ...
+Unpacking replacement libncurses5 ...
+Setting up libncurses5 (5.9-6) ...
+(Reading database ... 10682 files and directories currently installed.)
+Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.6.dfsg-2_mipsel.deb) ...
+Unpacking replacement zlib1g ...
+Setting up zlib1g (1:1.2.6.dfsg-2) ...
Selecting previously unselected package libpipeline1.
-(Reading database ... 11108 files and directories currently installed.)
+(Reading database ... 10682 files and directories currently installed.)
Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_mipsel.deb) ...
Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_mipsel.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.11-1_mipsel.deb) ...
+Selecting previously unselected package libpcre3.
+Unpacking libpcre3 (from .../libpcre3_1%3a8.30-4_mipsel.deb) ...
Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_mipsel.deb) ...
+Unpacking libexpat1 (from .../libexpat1_2.1.0-1_mipsel.deb) ...
Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_mipsel.deb) ...
+Unpacking libfreetype6 (from .../libfreetype6_2.4.9-1_mipsel.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
@@ -1638,40 +1331,44 @@ Selecting previously unselected package libfontconfig1.
Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_mipsel.deb) ...
Selecting previously unselected package libpixman-1-0.
Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_mipsel.deb) ...
+Selecting previously unselected package libpng12-0.
+Unpacking libpng12-0 (from .../libpng12-0_1.2.49-1_mipsel.deb) ...
Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_mipsel.deb) ...
+Unpacking libxau6 (from .../libxau6_1%3a1.0.7-1_mipsel.deb) ...
Selecting previously unselected package libxdmcp6.
Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_mipsel.deb) ...
Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_mipsel.deb) ...
+Unpacking libxcb1 (from .../libxcb1_1.8.1-1_mipsel.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
Selecting previously unselected package libx11-6.
Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_mipsel.deb) ...
Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_mipsel.deb) ...
+Unpacking libxcb-render0 (from .../libxcb-render0_1.8.1-1_mipsel.deb) ...
Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_mipsel.deb) ...
+Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8.1-1_mipsel.deb) ...
Selecting previously unselected package libxrender1.
Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_mipsel.deb) ...
Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_mipsel.deb) ...
+Unpacking libcairo2 (from .../libcairo2_1.12.0-2_mipsel.deb) ...
Selecting previously unselected package libffi5.
Unpacking libffi5 (from .../libffi5_3.0.10-3_mipsel.deb) ...
Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_mipsel.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.32.0-3_mipsel.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_mipsel.deb) ...
Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_mipsel.deb) ...
+Unpacking libcroco3 (from .../libcroco3_0.6.5-1_mipsel.deb) ...
Selecting previously unselected package libdatrie1.
Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_mipsel.deb) ...
Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_mipsel.deb) ...
+Unpacking libgfortran3 (from .../libgfortran3_4.7.0-2_mipsel.deb) ...
+Preparing to replace libgomp1 4.6.2-12 (using .../libgomp1_4.7.0-2_mipsel.deb) ...
+Unpacking replacement libgomp1 ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_mipsel.deb) ...
+Unpacking libice6 (from .../libice6_2%3a1.0.8-2_mipsel.deb) ...
Selecting previously unselected package libjpeg8.
Unpacking libjpeg8 (from .../libjpeg8_8d-1_mipsel.deb) ...
Selecting previously unselected package libthai-data.
@@ -1683,13 +1380,13 @@ Unpacking libxft2 (from .../libxft2_2.2.0-3_mipsel.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_mipsel.deb) ...
Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_mipsel.deb) ...
+Unpacking libpango1.0-0 (from .../libpango1.0-0_1.30.0-1_mipsel.deb) ...
Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_mipsel.deb) ...
+Unpacking libpcrecpp0 (from .../libpcrecpp0_1%3a8.30-4_mipsel.deb) ...
Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_mipsel.deb) ...
+Unpacking libsm6 (from .../libsm6_2%3a1.2.1-2_mipsel.deb) ...
Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_mipsel.deb) ...
+Unpacking libtiff4 (from .../libtiff4_3.9.6-2_mipsel.deb) ...
Selecting previously unselected package libunistring0.
Unpacking libunistring0 (from .../libunistring0_0.9.3-5_mipsel.deb) ...
Selecting previously unselected package libxext6.
@@ -1698,16 +1395,30 @@ Selecting previously unselected package libxss1.
Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_mipsel.deb) ...
Selecting previously unselected package libxt6.
Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_mipsel.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_mipsel.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6_mipsel.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-7_mipsel.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_mipsel.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_mipsel.deb) ...
+Preparing to replace g++-4.6 4.6.2-12 (using .../g++-4.6_4.6.3-2_mipsel.deb) ...
+Unpacking replacement g++-4.6 ...
+Preparing to replace libstdc++6-4.6-dev 4.6.2-12 (using .../libstdc++6-4.6-dev_4.6.3-2_mipsel.deb) ...
+Unpacking replacement libstdc++6-4.6-dev ...
+Preparing to replace gcc-4.6 4.6.2-12 (using .../gcc-4.6_4.6.3-2_mipsel.deb) ...
+Unpacking replacement gcc-4.6 ...
+Preparing to replace cpp-4.6 4.6.2-12 (using .../cpp-4.6_4.6.3-2_mipsel.deb) ...
+Unpacking replacement cpp-4.6 ...
+Preparing to replace gcc-4.6-base 4.6.2-12 (using .../gcc-4.6-base_4.6.3-2_mipsel.deb) ...
+Unpacking replacement gcc-4.6-base ...
Selecting previously unselected package file.
-Unpacking file (from .../file_5.10-1_mipsel.deb) ...
+Unpacking file (from .../file_5.11-1_mipsel.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_mipsel.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
+Preparing to replace cpp 4:4.6.2-4 (using .../cpp_4%3a4.6.3-4_mipsel.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mipsel.deb) ...
Selecting previously unselected package gettext.
@@ -1717,13 +1428,16 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
+Preparing to replace gcc 4:4.6.2-4 (using .../gcc_4%3a4.6.3-4_mipsel.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_mipsel.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-2_mipsel.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_mipsel.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_mipsel.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_mipsel.deb) ...
Selecting previously unselected package libblas-dev.
@@ -1737,19 +1451,19 @@ Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_mipsel.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_mipsel.deb) ...
Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_mipsel.deb) ...
+Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-6_mipsel.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_mipsel.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_mipsel.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_mipsel.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_mipsel.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_mipsel.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_mipsel.deb) ...
Selecting previously unselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_mipsel.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_mipsel.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_mipsel.deb) ...
Selecting previously unselected package libreadline6-dev.
Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_mipsel.deb) ...
Selecting previously unselected package libreadline-dev.
@@ -1757,7 +1471,7 @@ Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_mipsel.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../archives/zip_3.0-4_mipsel.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../unzip_6.0-5_mipsel.deb) ...
+Unpacking unzip (from .../unzip_6.0-6_mipsel.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -1765,37 +1479,40 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_mipsel.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_mipsel.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_mipsel.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_mipsel.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Setting up libmagic1 (5.11-1) ...
+Setting up libpcre3 (1:8.30-4) ...
+Setting up libexpat1 (2.1.0-1) ...
+Setting up libfreetype6 (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
Setting up libfontconfig1 (2.8.0-3.1) ...
Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
+Setting up libpng12-0 (1.2.49-1) ...
+Setting up libxau6 (1:1.0.7-1) ...
Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libxcb1 (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
+Setting up libxcb-render0 (1.8.1-1) ...
+Setting up libxcb-shm0 (1.8.1-1) ...
Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
+Setting up libcairo2 (1.12.0-2) ...
Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libglib2.0-0 (2.32.0-3) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
+Setting up libcroco3 (0.6.5-1) ...
Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libgfortran3 (4.7.0-2) ...
+Setting up libgomp1 (4.7.0-2) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
+Setting up libice6 (2:1.0.8-2) ...
Setting up libjpeg8 (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
Setting up libthai0 (0.1.17-1) ...
@@ -1803,28 +1520,36 @@ Setting up libxft2 (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
+Setting up libpango1.0-0 (1.30.0-1) ...
+Setting up libpcrecpp0 (1:8.30-4) ...
+Setting up libsm6 (2:1.2.1-2) ...
+Setting up libtiff4 (3.9.6-2) ...
Setting up libunistring0 (0.9.3-5) ...
Setting up libxext6 (2:1.3.0-3) ...
Setting up libxss1 (1:1.2.1-2) ...
Setting up libxt6 (1:1.1.1-2) ...
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.1-1) ...
+Setting up bsdmainutils (9.0.1) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up gcc-4.6-base (4.6.3-2) ...
+Setting up cpp-4.6 (4.6.3-2) ...
+Setting up gcc-4.6 (4.6.3-2) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
+Setting up cpp (4:4.6.3-4) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gcc (4:4.6.3-4) ...
+Setting up gfortran-4.6 (4.6.3-2) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
@@ -1836,110 +1561,40 @@ Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
+Setting up libpcre3-dev (1:8.30-4) ...
Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
+Setting up libpng12-dev (1.2.49-1) ...
Setting up libreadline6-dev (6.2-8) ...
Setting up libreadline-dev (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.0-1) ...
+Setting up g++-4.6 (4.6.3-2) ...
+Setting up libstdc++6-4.6-dev (4.6.3-2) ...
Removing negative dependencies:
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 54 not upgraded.
Checking correctness of dependencies...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Kernel: Linux 2.6.32-5-sb1-bcm91250a mipsel (mips64)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.4-1
-Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpio_2.11-7 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dmsetup_2:1.02.67-2 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-3 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdevmapper1.02.1_2:1.02.67-2 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-3 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libncurses5-dev_5.9-4 libncursesw5_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libprocps0_1:3.3.2-3 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-2 libsepol1_2.1.4-1 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42-1 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libudev0_175-3.1 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.4-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 module-init-tools_3.16-1 mount_2.20.1-1.2 multiarch-support_2.13-26 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 udev_175-3.1 unzip_6.0-5 util-linux_2.20.1-1.2 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: Linux 2.6.39-3-loongson-2e mipsel (mips64)
+Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-2 gcc-4.6_4.6.3-2 libc6-dev_2.13-26 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-2 linux-libc-dev_3.2.4-1
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3 cpp_4:4.6.3-4 cpp-4.6_4.6.3-2 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-2 gcc_4:4.6.3-4 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-2 gcc-4.6-base_4.6.3-2 gcc-4.7-base_4.7.0-2 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-2 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-7 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-26 libc-dev-bin_2.13-26 libc6_2.13-26 libc6-dev_2.13-26 libcairo2_1.12.0-2 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-2 libgdbm3_1.8.3-10 libgfortran3_4.7.0-2 libglib2.0-0_2.32.0-3 libgmp10_2:5.0.3+dfsg-1 libgomp1_4.7.0-2 libice6_2:1.0.8-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-6 libncurses5-dev_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-6 libsm6_2:1.2.1-2 libss2_1.42-1 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-2 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.4-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-26 ncurses-base_5.9-4 ncurses-bin_5.9-6 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-7 po-debconf_1.0.16+nmu2 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-1.2 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -1949,49 +1604,13 @@ Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binu
Unpack source
─────────────
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -2000,45 +1619,9 @@ Check disc space
dpkg-buildpackage
─────────────────
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture mipsel
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -2046,9 +1629,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -2082,10 +1665,10 @@ rm -f config.log config.status
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
-/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) insteadmake[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
+
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -2093,9 +1676,9 @@ if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -2109,44 +1692,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -g0 -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g0 -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -2185,7 +1768,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -2210,72 +1793,67 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_mipsel.deb'.
- dpkg-genchanges -B -mmipsel Build Daemon (mayer) <buildd_mips-mayer at buildd.debian.org> >../r-bioc-limma_3.10.3-1_mipsel.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_mipsel.deb'.
+ dpkg-genchanges -B -mmipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_mipsel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0606
+Build finished at 20120412-0509
-r-bioc-limma_3.10.3-1_mipsel.changes:
+r-bioc-limma_3.12.0~dfsg-1_mipsel.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: mipsel
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: mipsel Build Daemon (mayer) <buildd_mips-mayer at buildd.debian.org>
+Maintainer: mipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 481412812c83e1f08fdd33f7f5a2feabc972c3e6 1473698 r-bioc-limma_3.10.3-1_mipsel.deb
+ 51aa09c772e3c5510f3207dcbe29181953ad4abb 806304 r-bioc-limma_3.12.0~dfsg-1_mipsel.deb
Checksums-Sha256:
- b5835ee2a9aa2aa1d3a341902f1d5c9f63c95bf12ad9e5ffee322948964fb29a 1473698 r-bioc-limma_3.10.3-1_mipsel.deb
+ 0c6604b3c9e483e70ff6a548bb04c45e314031b499c0184f26a2b6d32262eeec 806304 r-bioc-limma_3.12.0~dfsg-1_mipsel.deb
Files:
- d11b0c0b5d0de907207bbd47cda82e08 1473698 gnu-r optional r-bioc-limma_3.10.3-1_mipsel.deb
+ a751dac436d9bce200b7b445102f1ef1 806304 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_mipsel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_mipsel.deb
-────────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_mipsel.deb
+─────────────────────────────────────
new debian package, version 2.0.
- size 1473698 bytes: control archive= 1569 bytes.
- 770 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 806304 bytes: control archive= 1545 bytes.
+ 774 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: mipsel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1681
- Depends: libc6 (>= 2.2), r-base-core (>= 2.14.2-1)
+ Installed-Size: 984
+ Depends: libc6 (>= 2.2), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -2287,52 +1865,51 @@ r-bioc-limma_3.10.3-1_mipsel.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 06:05 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 06:05 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 1901 2012-03-07 06:05 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 971 2012-03-07 06:05 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 1054 2012-03-07 06:05 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6022 2012-03-07 06:06 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5603 2012-03-07 06:06 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 2886 2012-03-07 06:06 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 216 2012-03-07 06:06 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 518 2012-03-07 06:06 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10704 2012-03-07 06:06 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2012-03-07 06:05 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 383 2012-03-07 06:05 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 198254 2012-03-07 06:05 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 3775 2012-03-07 06:05 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 89361 2012-03-07 06:05 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rwxr-xr-x root/root 673 2012-03-07 06:05 ./usr/lib/R/site-library/limma/doc/index.html
--rwxr-xr-x root/root 1711 2012-03-07 06:05 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 42743 2012-03-07 06:05 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 737677 2012-03-07 06:05 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rwxr-xr-x root/root 1230 2012-03-07 06:05 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 2173 2012-03-07 06:05 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 06:05 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1351 2012-03-07 06:05 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 458514 2012-03-07 06:05 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3275 2012-03-07 06:05 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6221 2012-03-07 06:05 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2392 2012-03-07 06:05 ./usr/lib/R/site-library/limma/help/aliases.rds
-drwxr-xr-x root/root 0 2012-03-07 06:05 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 34556 2012-03-07 06:05 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2012-03-07 06:05 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 9458 2012-03-07 06:06 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2012-03-07 06:04 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2302 2012-03-07 06:04 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 560 2012-03-07 06:04 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-12 05:08 ./
+drwxr-xr-x root/root 0 2012-04-12 05:08 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 05:08 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 05:08 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 05:09 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 27998 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 264 2012-04-12 05:06 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 683 2012-04-12 05:06 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 2457 2012-04-12 05:06 ./usr/share/doc/r-bioc-limma/copyright
+drwxr-xr-x root/root 0 2012-04-12 05:07 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 05:07 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 05:08 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 05:08 ./usr/lib/R/site-library/limma/
+drwxr-xr-x root/root 0 2012-04-12 05:08 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 472367 2012-04-12 05:08 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 1372 2012-04-12 05:08 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 2431 2012-04-12 05:08 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 3334 2012-04-12 05:08 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 6317 2012-04-12 05:08 ./usr/lib/R/site-library/limma/help/AnIndex
+drwxr-xr-x root/root 0 2012-04-12 05:07 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 383 2012-04-12 05:07 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 202044 2012-04-12 05:07 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 3819 2012-04-12 05:07 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rwxr-xr-x root/root 1230 2012-04-12 05:07 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 9754 2012-04-12 05:08 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 05:08 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 91993 2012-04-12 05:07 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 42743 2012-04-12 05:07 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 673 2012-04-12 05:07 ./usr/lib/R/site-library/limma/doc/index.html
+-rwxr-xr-x root/root 1711 2012-04-12 05:07 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+drwxr-xr-x root/root 0 2012-04-12 05:08 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2012-04-12 05:08 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 35015 2012-04-12 05:08 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 971 2012-04-12 05:07 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2012-04-12 05:08 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 521 2012-04-12 05:08 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 220 2012-04-12 05:08 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 2943 2012-04-12 05:08 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 5727 2012-04-12 05:08 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 1055 2012-04-12 05:07 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 6157 2012-04-12 05:08 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+drwxr-xr-x root/root 0 2012-04-12 05:09 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 10704 2012-04-12 05:09 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 1901 2012-04-12 05:07 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 3989 2012-04-12 05:07 ./usr/lib/R/site-library/limma/NEWS.Rd
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -2346,349 +1923,27 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mipsel-sbuild-9712b38b-1667-4959-b9f7-703d458fdd7b/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
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-I: This option will be removed in the future; please update your configuration
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
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-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages will be REMOVED:
- cdbs* debhelper* dpatch* file* fontconfig* fontconfig-config* gettext*
- gettext-base* gfortran* gfortran-4.6* groff-base* html2text*
- intltool-debian* libblas-dev* libblas3gf* libbz2-dev* libcairo2* libcroco3*
- libdatrie1* libexpat1* libffi5* libfontconfig1* libfreetype6* libgfortran3*
- libglib2.0-0* libice6* libjpeg8* libjpeg8-dev* liblapack-dev* liblapack3gf*
- libmagic1* libncurses5-dev* libpango1.0-0* libpaper-utils* libpaper1*
- libpcre3-dev* libpcrecpp0* libpipeline1* libpixman-1-0* libpng12-dev*
- libreadline-dev* libreadline6-dev* libsm6* libthai-data* libthai0* libtiff4*
- libtinfo-dev* libunistring0* libx11-6* libx11-data* libxau6* libxcb-render0*
- libxcb-shm0* libxcb1* libxdmcp6* libxext6* libxft2* libxml2* libxrender1*
- libxss1* libxt6* man-db* po-debconf* r-base-core* r-base-dev* tcl8.5* tk8.5*
- ttf-dejavu-core* unzip* x11-common* xdg-utils* zip* zlib1g-dev*
-0 upgraded, 0 newly installed, 73 to remove and 20 not upgraded.
-After this operation, 120 MB disk space will be freed.
-(Reading database ... 15032 files and directories currently installed.)
-Removing r-base-dev ...
-Removing cdbs ...
-Removing debhelper ...
-Removing dpatch ...
-Purging configuration files for dpatch ...
-Removing file ...
-Removing r-base-core ...
-Purging configuration files for r-base-core ...
-Removing libpango1.0-0 ...
-Purging configuration files for libpango1.0-0 ...
-Removing fontconfig ...
-Purging configuration files for fontconfig ...
-Removing tk8.5 ...
-Purging configuration files for tk8.5 ...
-Removing libxft2 ...
-Purging configuration files for libxft2 ...
-Removing libcairo2 ...
-Purging configuration files for libcairo2 ...
-Removing libfontconfig1 ...
-Purging configuration files for libfontconfig1 ...
-Removing fontconfig-config ...
-Purging configuration files for fontconfig-config ...
-Removing po-debconf ...
-Removing intltool-debian ...
-Removing gettext ...
-Removing gettext-base ...
-Removing gfortran ...
-Removing gfortran-4.6 ...
-Removing man-db ...
-Purging configuration files for man-db ...
-Removing groff-base ...
-Purging configuration files for groff-base ...
-Removing html2text ...
-Purging configuration files for html2text ...
-Removing liblapack-dev ...
-Removing libblas-dev ...
-Removing liblapack3gf ...
-Purging configuration files for liblapack3gf ...
-Removing libblas3gf ...
-Purging configuration files for libblas3gf ...
-Removing libbz2-dev ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libthai0 ...
-Purging configuration files for libthai0 ...
-Removing libdatrie1 ...
-Purging configuration files for libdatrie1 ...
-Removing libexpat1 ...
-Purging configuration files for libexpat1 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
-Removing libffi5 ...
-Purging configuration files for libffi5 ...
-Removing libfreetype6 ...
-Purging configuration files for libfreetype6 ...
-Removing libgfortran3 ...
-Purging configuration files for libgfortran3 ...
-Removing libxt6 ...
-Purging configuration files for libxt6 ...
-Removing libsm6 ...
-Purging configuration files for libsm6 ...
-Removing libice6 ...
-Purging configuration files for libice6 ...
-Removing libtiff4 ...
-Purging configuration files for libtiff4 ...
-Removing libjpeg8-dev ...
-Removing libjpeg8 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
-Removing libncurses5-dev ...
-Removing libpaper-utils ...
-Removing libpaper1 ...
-Purging configuration files for libpaper1 ...
-Removing libpcre3-dev ...
-Removing libpcrecpp0 ...
-Purging configuration files for libpcrecpp0 ...
-Removing libpipeline1 ...
-Purging configuration files for libpipeline1 ...
-Removing libpixman-1-0 ...
-Purging configuration files for libpixman-1-0 ...
-Removing libpng12-dev ...
-Removing libreadline-dev ...
-Removing libreadline6-dev ...
-Removing libthai-data ...
-Removing libtinfo-dev ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libxss1 ...
-Purging configuration files for libxss1 ...
-Removing libxrender1 ...
-Purging configuration files for libxrender1 ...
-Removing libxext6 ...
-Purging configuration files for libxext6 ...
-Removing libx11-6 ...
-Purging configuration files for libx11-6 ...
-Removing libx11-data ...
-Removing libxcb-shm0 ...
-Purging configuration files for libxcb-shm0 ...
-Removing libxcb-render0 ...
-Purging configuration files for libxcb-render0 ...
-Removing libxcb1 ...
-Purging configuration files for libxcb1 ...
-Removing libxau6 ...
-Purging configuration files for libxau6 ...
-Removing libxdmcp6 ...
-Purging configuration files for libxdmcp6 ...
-Removing libxml2 ...
-Purging configuration files for libxml2 ...
-Removing tcl8.5 ...
-Purging configuration files for tcl8.5 ...
-Removing ttf-dejavu-core ...
-Removing unzip ...
-Purging configuration files for unzip ...
-Removing x11-common ...
-All runlevel operations denied by policy
-invoke-rc.d: policy-rc.d denied execution of stop.
-Purging configuration files for x11-common ...
-Removing xdg-utils ...
-Removing zip ...
-Removing zlib1g-dev ...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
+Purging /var/lib/schroot/mount/sid-mipsel-sbuild-5b96f965-8ec0-4630-8a72-dc3bf7b7f74c/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b
+Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: mipsel
-Build-Space: 5332
-Build-Time: 115
+Build-Space: 3268
+Build-Time: 145
Distribution: sid
-Install-Time: 112
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 278
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 261
-Source-Version: 3.10.3-1
-Space: 5332
+Package-Time: 581
+Source-Version: 3.12.0~dfsg-1
+Space: 3268
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0606
-Build needed 00:04:21, 5332k disc space
-Signature with key '8C9FAB20' requested:
+Finished at 20120412-0509
+Build needed 00:09:41, 3268k disc space
+Signature with key '7550FB2E' requested:
diff --git a/mipsel.log b/mipsel.log
index 13224dc..1400e04 100644
--- a/mipsel.log
+++ b/mipsel.log
@@ -1,174 +1,70 @@
-From buildd at mayer.debian.org Wed Mar 07 06:07:33 2012
-Return-path: <buildd at mayer.debian.org>
+From buildd at eysler.debian.org Thu Apr 12 05:09:35 2012
+Return-path: <buildd at eysler.debian.org>
Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
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CN=kokkonen.debian.org,
EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at mayer.debian.org>)
- id 1S5A29-00085g-CU
- for logs at buildd.debian.org; Wed, 07 Mar 2012 06:07:33 +0000
-Received: from mayer.debian.org ([140.211.166.78])
+ (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
+ id 1SICHn-0001fs-2M
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 05:09:35 +0000
+Received: from eysler.debian.org ([2001:858:2:2:1a1a:0:563b:7698])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=mayer.debian.org, EMAIL=hostmaster at mayer.debian.org (verified)
+ CN=eysler.debian.org, EMAIL=hostmaster at eysler.debian.org (verified)
by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at mayer.debian.org>)
- id 1S5A27-00020P-EJ
- for logs at buildd.debian.org; Wed, 07 Mar 2012 06:07:32 +0000
-Received: from buildd by mayer.debian.org with local (Exim 4.72)
- (envelope-from <buildd at mayer.debian.org>) id 1S5A25-0007NC-7p
- for logs at buildd.debian.org; Wed, 07 Mar 2012 06:07:29 +0000
-Date: Wed, 07 Mar 2012 06:07:29 +0000
-Message-Id: <E1S5A25-0007NC-7p at mayer.debian.org>
-From: buildd on mayer <buildd at mayer.debian.org>
+ (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
+ id 1SICHm-0002uY-1a
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 05:09:34 +0000
+Received: from buildd by eysler.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at eysler.debian.org>) id 1SICHj-0003MN-GL
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 05:09:31 +0000
+Date: Thu, 12 Apr 2012 05:09:31 +0000
+Message-Id: <E1SICHj-0003MN-GL at eysler.debian.org>
+From: buildd on eysler <buildd at eysler.debian.org>
To: logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on mipsel (dist=sid)
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on mipsel
+ (dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on mayer.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on eysler.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (mipsel) 07 Mar 2012 06:02 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (mipsel) 12 Apr 2012 04:59 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: mipsel
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Hit http://debian.oregonstate.edu sid InRelease
-Hit http://debian.oregonstate.edu sid/main Sources
-Hit http://debian.oregonstate.edu sid/contrib Sources
-Hit http://debian.oregonstate.edu sid/main mipsel Packages
-Hit http://debian.oregonstate.edu sid/contrib mipsel Packages
-Ign http://debian.oregonstate.edu sid/contrib TranslationIndex
-Hit http://debian.oregonstate.edu sid/main TranslationIndex
-Hit http://debian.oregonstate.edu sid/contrib Translation-en
-Hit http://debian.oregonstate.edu sid/main Translation-en
-Hit http://incoming.debian.org sid InRelease
+Get:1 http://ftp.at.debian.org unstable InRelease [208 kB]
+Get:2 http://incoming.debian.org unstable InRelease [208 kB]
+Get:3 http://ftp.at.debian.org unstable/main Sources [6221 kB]
Ign http://incoming.debian.org InRelease
-Hit http://incoming.debian.org Release.gpg
-Hit http://incoming.debian.org sid/main Sources
-Hit http://incoming.debian.org sid/contrib Sources
-Hit http://incoming.debian.org sid/main mipsel Packages
-Hit http://incoming.debian.org sid/contrib mipsel Packages
-Ign http://incoming.debian.org sid/contrib TranslationIndex
-Hit http://incoming.debian.org sid/main TranslationIndex
-Hit http://incoming.debian.org Release
-Hit http://incoming.debian.org sid/contrib Translation-en
-Hit http://incoming.debian.org sid/main Translation-en
-Hit http://incoming.debian.org Sources
-Hit http://incoming.debian.org Packages
+Get:4 http://incoming.debian.org Release.gpg [836 B]
+Get:5 http://incoming.debian.org Release [1601 B]
+Get:6 http://incoming.debian.org unstable/main Sources [6221 kB]
+Get:7 http://ftp.at.debian.org unstable/contrib Sources [54.5 kB]
+Get:8 http://ftp.at.debian.org unstable/non-free Sources [97.7 kB]
+Get:9 http://ftp.at.debian.org unstable/main mipsel Packages [5836 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [54.5 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [97.7 kB]
+Get:12 http://incoming.debian.org unstable/main mipsel Packages [5836 kB]
+Get:13 http://ftp.at.debian.org unstable/contrib mipsel Packages [37.3 kB]
+Ign http://ftp.at.debian.org unstable/contrib TranslationIndex
+Get:14 http://ftp.at.debian.org unstable/main TranslationIndex [2223 B]
+Get:15 http://ftp.at.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:16 http://ftp.at.debian.org unstable/main Translation-en [3936 kB]
+Get:17 http://incoming.debian.org unstable/contrib mipsel Packages [37.3 kB]
+Ign http://incoming.debian.org unstable/contrib TranslationIndex
+Get:18 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:19 http://incoming.debian.org Sources [42.8 kB]
+Get:20 http://incoming.debian.org Packages [744 kB]
+Get:21 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:22 http://incoming.debian.org unstable/main Translation-en [3936 kB]
Ign http://incoming.debian.org Translation-en
+Fetched 33.6 MB in 1min 38s (342 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -180,92 +76,20 @@ Check APT
─────────
Checking available source versions...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Download source files with APT
──────────────────────────────
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 1s (698 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 1s (207 kB/s)
Download complete and in download only mode
Check arch
@@ -278,200 +102,20 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
build-essential: already installed (11.5)
fakeroot: already installed (1.18.2-1)
Checking for dependency conflicts...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Installing positive dependencies:
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 68 not upgraded.
Removing negative dependencies:
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 68 not upgraded.
Checking correctness of dependencies...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
┌──────────────────────────────────────────────────────────────────────────────┐
│ Install r-bioc-limma build dependencies (internal resolver) │
@@ -479,42 +123,6 @@ I: This option will be removed in the future; please update your configuration
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
Checking for already installed dependencies...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
base-files: already installed (6.5)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-1)
@@ -523,14 +131,14 @@ dash: already installed (0.5.7-2)
debianutils: already installed (4.2.1)
diffutils: already installed (1:3.2-1)
dpkg: already installed (1.16.1.2)
-e2fsprogs: already installed (1.42.1-2)
+e2fsprogs: already installed (1.42-1)
findutils: already installed (4.4.2-4)
grep: already installed (2.10-1)
gzip: already installed (1.4-2)
hostname: already installed (3.10)
ncurses-base: already installed (5.9-4)
ncurses-bin: already installed (5.9-4)
-perl-base: already installed (5.14.2-9)
+perl-base: already installed (5.14.2-7)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.4.2+svn3283-3)
sysvinit-utils: already installed (2.88dsf-22)
@@ -539,148 +147,205 @@ tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-1.2)
mount: already installed (2.20.1-1.2)
util-linux: already installed (2.20.1-1.2)
-libc6-dev: already installed (2.13-27)
+libc6-dev: already installed (2.13-26)
gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Installing positive dependencies: debhelper cdbs r-base-dev
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- dpatch file fontconfig fontconfig-config gettext gettext-base gfortran
+ bsdmainutils cpp cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
+ gcc gcc-4.6 gcc-4.6-base gcc-4.7-base gettext gettext-base gfortran
gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf
libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1
- libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
- libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
- libtiff4 libtinfo-dev libunistring0 libx11-6 libx11-data libxau6
- libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
- libxrender1 libxss1 libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5
- ttf-dejavu-core unzip x11-common xdg-utils zip zlib1g-dev
+ libfreetype6 libgcc1 libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5
+ libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev
+ libthai-data libthai0 libtiff4 libtinfo-dev libtinfo5 libunistring0 libx11-6
+ libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
+ libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
+ r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip
+ zlib1g zlib1g-dev
Suggested packages:
- devscripts dh-make curl defoma gettext-doc gfortran-multilib gfortran-doc
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ curl defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib
+ manpages-dev autoconf automake1.9 libtool flex bison gdb gcc-doc
+ gcc-4.6-multilib libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg
+ libquadmath-dbg libmudflap0-dbg gettext-doc gfortran-multilib gfortran-doc
gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp less www-browser libmail-box-perl r-doc-info r-doc-pdf
- r-mathlib r-base-html texlive-base texlive-latex-base
+ ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info libgpm2
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
- libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-dev libreadline-dev libreadline6-dev libsm6
- libthai-data libthai0 libtiff4 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip
- zlib1g-dev
-0 upgraded, 73 newly installed, 0 to remove and 20 not upgraded.
-Need to get 19.7 MB/55.5 MB of archives.
-After this operation, 120 MB of additional disk space will be used.
-Get:1 http://debian.oregonstate.edu/debian/ sid/main r-base-core mipsel 2.14.2-1 [19.7 MB]
-Get:2 http://debian.oregonstate.edu/debian/ sid/main r-base-dev all 2.14.2-1 [3894 B]
+ bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config
+ gcc-4.7-base gettext gettext-base gfortran gfortran-4.6 groff-base html2text
+ intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgfortran3
+ libglib2.0-0 libice6 libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf
+ libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3
+ libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4
+ libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
+ libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
+ libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core
+ unzip x11-common xdg-utils zip zlib1g-dev
+The following packages will be upgraded:
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base libgcc1 libgomp1 libncurses5
+ libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin zlib1g
+14 upgraded, 77 newly installed, 0 to remove and 54 not upgraded.
+Need to get 74.2 MB of archives.
+After this operation, 121 MB of additional disk space will be used.
+Get:1 http://ftp.at.debian.org/debian/ unstable/main ncurses-bin mipsel 5.9-6 [329 kB]
+Get:2 http://ftp.at.debian.org/debian/ unstable/main gcc-4.7-base mipsel 4.7.0-2 [139 kB]
+Get:3 http://ftp.at.debian.org/debian/ unstable/main libgcc1 mipsel 1:4.7.0-2 [69.1 kB]
+Get:4 http://ftp.at.debian.org/debian/ unstable/main libstdc++6 mipsel 4.7.0-2 [305 kB]
+Get:5 http://ftp.at.debian.org/debian/ unstable/main libtinfo5 mipsel 5.9-6 [265 kB]
+Get:6 http://ftp.at.debian.org/debian/ unstable/main libncurses5 mipsel 5.9-6 [284 kB]
+Get:7 http://ftp.at.debian.org/debian/ unstable/main zlib1g mipsel 1:1.2.6.dfsg-2 [85.7 kB]
+Get:8 http://ftp.at.debian.org/debian/ unstable/main libpipeline1 mipsel 1.2.1-1 [36.7 kB]
+Get:9 http://ftp.at.debian.org/debian/ unstable/main libmagic1 mipsel 5.11-1 [251 kB]
+Get:10 http://ftp.at.debian.org/debian/ unstable/main libpcre3 mipsel 1:8.30-4 [245 kB]
+Get:11 http://ftp.at.debian.org/debian/ unstable/main libexpat1 mipsel 2.1.0-1 [144 kB]
+Get:12 http://ftp.at.debian.org/debian/ unstable/main libfreetype6 mipsel 2.4.9-1 [434 kB]
+Get:13 http://ftp.at.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:14 http://ftp.at.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:15 http://ftp.at.debian.org/debian/ unstable/main libfontconfig1 mipsel 2.8.0-3.1 [285 kB]
+Get:16 http://ftp.at.debian.org/debian/ unstable/main libpixman-1-0 mipsel 0.24.4-1 [362 kB]
+Get:17 http://ftp.at.debian.org/debian/ unstable/main libpng12-0 mipsel 1.2.49-1 [185 kB]
+Get:18 http://ftp.at.debian.org/debian/ unstable/main libxau6 mipsel 1:1.0.7-1 [18.2 kB]
+Get:19 http://ftp.at.debian.org/debian/ unstable/main libxdmcp6 mipsel 1:1.1.0-4 [22.4 kB]
+Get:20 http://ftp.at.debian.org/debian/ unstable/main libxcb1 mipsel 1.8.1-1 [41.0 kB]
+Get:21 http://ftp.at.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
+Get:22 http://ftp.at.debian.org/debian/ unstable/main libx11-6 mipsel 2:1.4.4-4 [857 kB]
+Get:23 http://ftp.at.debian.org/debian/ unstable/main libxcb-render0 mipsel 1.8.1-1 [16.1 kB]
+Get:24 http://ftp.at.debian.org/debian/ unstable/main libxcb-shm0 mipsel 1.8.1-1 [9950 B]
+Get:25 http://ftp.at.debian.org/debian/ unstable/main libxrender1 mipsel 1:0.9.6-2 [30.2 kB]
+Get:26 http://ftp.at.debian.org/debian/ unstable/main libcairo2 mipsel 1.12.0-2 [904 kB]
+Get:27 http://ftp.at.debian.org/debian/ unstable/main libffi5 mipsel 3.0.10-3 [22.8 kB]
+Get:28 http://ftp.at.debian.org/debian/ unstable/main libglib2.0-0 mipsel 2.32.0-3 [1960 kB]
+Get:29 http://ftp.at.debian.org/debian/ unstable/main libxml2 mipsel 2.7.8.dfsg-7 [859 kB]
+Get:30 http://ftp.at.debian.org/debian/ unstable/main libcroco3 mipsel 0.6.5-1 [139 kB]
+Get:31 http://ftp.at.debian.org/debian/ unstable/main libdatrie1 mipsel 0.2.5-3 [28.1 kB]
+Get:32 http://ftp.at.debian.org/debian/ unstable/main libgfortran3 mipsel 4.7.0-2 [240 kB]
+Get:33 http://ftp.at.debian.org/debian/ unstable/main libgomp1 mipsel 4.7.0-2 [28.8 kB]
+Get:34 http://ftp.at.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
+Get:35 http://ftp.at.debian.org/debian/ unstable/main libice6 mipsel 2:1.0.8-2 [56.7 kB]
+Get:36 http://ftp.at.debian.org/debian/ unstable/main libjpeg8 mipsel 8d-1 [145 kB]
+Get:37 http://ftp.at.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
+Get:38 http://ftp.at.debian.org/debian/ unstable/main libthai0 mipsel 0.1.17-1 [43.5 kB]
+Get:39 http://ftp.at.debian.org/debian/ unstable/main libxft2 mipsel 2.2.0-3 [56.8 kB]
+Get:40 http://ftp.at.debian.org/debian/ unstable/main fontconfig mipsel 2.8.0-3.1 [334 kB]
+Get:41 http://ftp.at.debian.org/debian/ unstable/main libpango1.0-0 mipsel 1.30.0-1 [439 kB]
+Get:42 http://ftp.at.debian.org/debian/ unstable/main libpcrecpp0 mipsel 1:8.30-4 [125 kB]
+Get:43 http://ftp.at.debian.org/debian/ unstable/main libsm6 mipsel 2:1.2.1-2 [32.5 kB]
+Get:44 http://ftp.at.debian.org/debian/ unstable/main libtiff4 mipsel 3.9.6-2 [192 kB]
+Get:45 http://ftp.at.debian.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
+Get:46 http://ftp.at.debian.org/debian/ unstable/main libxext6 mipsel 2:1.3.0-3 [48.8 kB]
+Get:47 http://ftp.at.debian.org/debian/ unstable/main libxss1 mipsel 1:1.2.1-2 [16.5 kB]
+Get:48 http://ftp.at.debian.org/debian/ unstable/main libxt6 mipsel 1:1.1.1-2 [189 kB]
+Get:49 http://ftp.at.debian.org/debian/ unstable/main bsdmainutils mipsel 9.0.1 [206 kB]
+Get:50 http://ftp.at.debian.org/debian/ unstable/main groff-base mipsel 1.21-7 [1106 kB]
+Get:51 http://ftp.at.debian.org/debian/ unstable/main man-db mipsel 2.6.1-2 [1026 kB]
+Get:52 http://ftp.at.debian.org/debian/ unstable/main g++-4.6 mipsel 4.6.3-2 [6334 kB]
+Get:53 http://ftp.at.debian.org/debian/ unstable/main libstdc++6-4.6-dev mipsel 4.6.3-2 [1671 kB]
+Get:54 http://ftp.at.debian.org/debian/ unstable/main gcc-4.6 mipsel 4.6.3-2 [4062 kB]
+Get:55 http://ftp.at.debian.org/debian/ unstable/main cpp-4.6 mipsel 4.6.3-2 [3789 kB]
+Get:56 http://ftp.at.debian.org/debian/ unstable/main gcc-4.6-base mipsel 4.6.3-2 [139 kB]
+Get:57 http://ftp.at.debian.org/debian/ unstable/main file mipsel 5.11-1 [53.0 kB]
+Get:58 http://ftp.at.debian.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-5 [133 kB]
+Get:59 http://ftp.at.debian.org/debian/ unstable/main cdbs all 0.4.109 [79.4 kB]
+Get:60 http://ftp.at.debian.org/debian/ unstable/main cpp mipsel 4:4.6.3-4 [16.3 kB]
+Get:61 http://ftp.at.debian.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
+Get:62 http://ftp.at.debian.org/debian/ unstable/main gettext mipsel 0.18.1.1-5 [2008 kB]
+Get:63 http://ftp.at.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:64 http://ftp.at.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:65 http://ftp.at.debian.org/debian/ unstable/main debhelper all 9.20120410 [694 kB]
+Get:66 http://ftp.at.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
+Get:67 http://ftp.at.debian.org/debian/ unstable/main gcc mipsel 4:4.6.3-4 [5026 B]
+Get:68 http://ftp.at.debian.org/debian/ unstable/main gfortran-4.6 mipsel 4.6.3-2 [4390 kB]
+Get:69 http://ftp.at.debian.org/debian/ unstable/main gfortran mipsel 4:4.6.3-4 [1134 B]
+Get:70 http://ftp.at.debian.org/debian/ unstable/main libblas3gf mipsel 1.2.20110419-2 [203 kB]
+Get:71 http://ftp.at.debian.org/debian/ unstable/main libblas-dev mipsel 1.2.20110419-2 [244 kB]
+Get:72 http://ftp.at.debian.org/debian/ unstable/main libbz2-dev mipsel 1.0.6-1 [37.2 kB]
+Get:73 http://ftp.at.debian.org/debian/ unstable/main libjpeg8-dev mipsel 8d-1 [257 kB]
+Get:74 http://ftp.at.debian.org/debian/ unstable/main liblapack3gf mipsel 3.3.1-1 [4277 kB]
+Get:75 http://ftp.at.debian.org/debian/ unstable/main liblapack-dev mipsel 3.3.1-1 [4906 kB]
+Get:76 http://ftp.at.debian.org/debian/ unstable/main libtinfo-dev mipsel 5.9-6 [102 kB]
+Get:77 http://ftp.at.debian.org/debian/ unstable/main libncurses5-dev mipsel 5.9-6 [403 kB]
+Get:78 http://ftp.at.debian.org/debian/ unstable/main libpaper1 mipsel 1.1.24+nmu1 [21.2 kB]
+Get:79 http://ftp.at.debian.org/debian/ unstable/main libpaper-utils mipsel 1.1.24+nmu1 [18.2 kB]
+Get:80 http://ftp.at.debian.org/debian/ unstable/main libpcre3-dev mipsel 1:8.30-4 [357 kB]
+Get:81 http://ftp.at.debian.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.6.dfsg-2 [212 kB]
+Get:82 http://ftp.at.debian.org/debian/ unstable/main libpng12-dev mipsel 1.2.49-1 [275 kB]
+Get:83 http://ftp.at.debian.org/debian/ unstable/main libreadline6-dev mipsel 6.2-8 [270 kB]
+Get:84 http://ftp.at.debian.org/debian/ unstable/main libreadline-dev mipsel 6.2-8 [892 B]
+Get:85 http://ftp.at.debian.org/debian/ unstable/main zip mipsel 3.0-4 [334 kB]
+Get:86 http://ftp.at.debian.org/debian/ unstable/main unzip mipsel 6.0-6 [189 kB]
+Get:87 http://ftp.at.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:88 http://ftp.at.debian.org/debian/ unstable/main tcl8.5 mipsel 8.5.11-1 [1613 kB]
+Get:89 http://ftp.at.debian.org/debian/ unstable/main tk8.5 mipsel 8.5.11-1 [1170 kB]
+Get:90 http://ftp.at.debian.org/debian/ unstable/main r-base-core mipsel 2.15.0-1 [19.9 MB]
+Get:91 http://ftp.at.debian.org/debian/ unstable/main r-base-dev all 2.15.0-1 [3900 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 19.7 MB in 2s (9562 kB/s)
+Fetched 74.2 MB in 21s (3414 kB/s)
+(Reading database ... 10674 files and directories currently installed.)
+Preparing to replace ncurses-bin 5.9-4 (using .../ncurses-bin_5.9-6_mipsel.deb) ...
+Unpacking replacement ncurses-bin ...
+Setting up ncurses-bin (5.9-6) ...
+Selecting previously unselected package gcc-4.7-base.
+(Reading database ... 10674 files and directories currently installed.)
+Unpacking gcc-4.7-base (from .../gcc-4.7-base_4.7.0-2_mipsel.deb) ...
+Setting up gcc-4.7-base (4.7.0-2) ...
+(Reading database ... 10682 files and directories currently installed.)
+Preparing to replace libgcc1 1:4.6.2-12 (using .../libgcc1_1%3a4.7.0-2_mipsel.deb) ...
+Unpacking replacement libgcc1 ...
+Setting up libgcc1 (1:4.7.0-2) ...
+(Reading database ... 10682 files and directories currently installed.)
+Preparing to replace libstdc++6 4.6.2-12 (using .../libstdc++6_4.7.0-2_mipsel.deb) ...
+Unpacking replacement libstdc++6 ...
+Setting up libstdc++6 (4.7.0-2) ...
+(Reading database ... 10682 files and directories currently installed.)
+Preparing to replace libtinfo5 5.9-4 (using .../libtinfo5_5.9-6_mipsel.deb) ...
+Unpacking replacement libtinfo5 ...
+Setting up libtinfo5 (5.9-6) ...
+(Reading database ... 10682 files and directories currently installed.)
+Preparing to replace libncurses5 5.9-4 (using .../libncurses5_5.9-6_mipsel.deb) ...
+Unpacking replacement libncurses5 ...
+Setting up libncurses5 (5.9-6) ...
+(Reading database ... 10682 files and directories currently installed.)
+Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.6.dfsg-2_mipsel.deb) ...
+Unpacking replacement zlib1g ...
+Setting up zlib1g (1:1.2.6.dfsg-2) ...
Selecting previously unselected package libpipeline1.
-(Reading database ... 11108 files and directories currently installed.)
+(Reading database ... 10682 files and directories currently installed.)
Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_mipsel.deb) ...
Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_mipsel.deb) ...
+Unpacking libmagic1 (from .../libmagic1_5.11-1_mipsel.deb) ...
+Selecting previously unselected package libpcre3.
+Unpacking libpcre3 (from .../libpcre3_1%3a8.30-4_mipsel.deb) ...
Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_mipsel.deb) ...
+Unpacking libexpat1 (from .../libexpat1_2.1.0-1_mipsel.deb) ...
Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_mipsel.deb) ...
+Unpacking libfreetype6 (from .../libfreetype6_2.4.9-1_mipsel.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
@@ -689,40 +354,44 @@ Selecting previously unselected package libfontconfig1.
Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_mipsel.deb) ...
Selecting previously unselected package libpixman-1-0.
Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_mipsel.deb) ...
+Selecting previously unselected package libpng12-0.
+Unpacking libpng12-0 (from .../libpng12-0_1.2.49-1_mipsel.deb) ...
Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_mipsel.deb) ...
+Unpacking libxau6 (from .../libxau6_1%3a1.0.7-1_mipsel.deb) ...
Selecting previously unselected package libxdmcp6.
Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_mipsel.deb) ...
Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_mipsel.deb) ...
+Unpacking libxcb1 (from .../libxcb1_1.8.1-1_mipsel.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
Selecting previously unselected package libx11-6.
Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_mipsel.deb) ...
Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_mipsel.deb) ...
+Unpacking libxcb-render0 (from .../libxcb-render0_1.8.1-1_mipsel.deb) ...
Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_mipsel.deb) ...
+Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8.1-1_mipsel.deb) ...
Selecting previously unselected package libxrender1.
Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_mipsel.deb) ...
Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_mipsel.deb) ...
+Unpacking libcairo2 (from .../libcairo2_1.12.0-2_mipsel.deb) ...
Selecting previously unselected package libffi5.
Unpacking libffi5 (from .../libffi5_3.0.10-3_mipsel.deb) ...
Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_mipsel.deb) ...
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.32.0-3_mipsel.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_mipsel.deb) ...
Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_mipsel.deb) ...
+Unpacking libcroco3 (from .../libcroco3_0.6.5-1_mipsel.deb) ...
Selecting previously unselected package libdatrie1.
Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_mipsel.deb) ...
Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_mipsel.deb) ...
+Unpacking libgfortran3 (from .../libgfortran3_4.7.0-2_mipsel.deb) ...
+Preparing to replace libgomp1 4.6.2-12 (using .../libgomp1_4.7.0-2_mipsel.deb) ...
+Unpacking replacement libgomp1 ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_mipsel.deb) ...
+Unpacking libice6 (from .../libice6_2%3a1.0.8-2_mipsel.deb) ...
Selecting previously unselected package libjpeg8.
Unpacking libjpeg8 (from .../libjpeg8_8d-1_mipsel.deb) ...
Selecting previously unselected package libthai-data.
@@ -734,13 +403,13 @@ Unpacking libxft2 (from .../libxft2_2.2.0-3_mipsel.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_mipsel.deb) ...
Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_mipsel.deb) ...
+Unpacking libpango1.0-0 (from .../libpango1.0-0_1.30.0-1_mipsel.deb) ...
Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_mipsel.deb) ...
+Unpacking libpcrecpp0 (from .../libpcrecpp0_1%3a8.30-4_mipsel.deb) ...
Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_mipsel.deb) ...
+Unpacking libsm6 (from .../libsm6_2%3a1.2.1-2_mipsel.deb) ...
Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_mipsel.deb) ...
+Unpacking libtiff4 (from .../libtiff4_3.9.6-2_mipsel.deb) ...
Selecting previously unselected package libunistring0.
Unpacking libunistring0 (from .../libunistring0_0.9.3-5_mipsel.deb) ...
Selecting previously unselected package libxext6.
@@ -749,16 +418,30 @@ Selecting previously unselected package libxss1.
Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_mipsel.deb) ...
Selecting previously unselected package libxt6.
Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_mipsel.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_mipsel.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6_mipsel.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-7_mipsel.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_mipsel.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_mipsel.deb) ...
+Preparing to replace g++-4.6 4.6.2-12 (using .../g++-4.6_4.6.3-2_mipsel.deb) ...
+Unpacking replacement g++-4.6 ...
+Preparing to replace libstdc++6-4.6-dev 4.6.2-12 (using .../libstdc++6-4.6-dev_4.6.3-2_mipsel.deb) ...
+Unpacking replacement libstdc++6-4.6-dev ...
+Preparing to replace gcc-4.6 4.6.2-12 (using .../gcc-4.6_4.6.3-2_mipsel.deb) ...
+Unpacking replacement gcc-4.6 ...
+Preparing to replace cpp-4.6 4.6.2-12 (using .../cpp-4.6_4.6.3-2_mipsel.deb) ...
+Unpacking replacement cpp-4.6 ...
+Preparing to replace gcc-4.6-base 4.6.2-12 (using .../gcc-4.6-base_4.6.3-2_mipsel.deb) ...
+Unpacking replacement gcc-4.6-base ...
Selecting previously unselected package file.
-Unpacking file (from .../file_5.10-1_mipsel.deb) ...
+Unpacking file (from .../file_5.11-1_mipsel.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_mipsel.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
+Preparing to replace cpp 4:4.6.2-4 (using .../cpp_4%3a4.6.3-4_mipsel.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_mipsel.deb) ...
Selecting previously unselected package gettext.
@@ -768,13 +451,16 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
+Preparing to replace gcc 4:4.6.2-4 (using .../gcc_4%3a4.6.3-4_mipsel.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_mipsel.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-2_mipsel.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_mipsel.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_mipsel.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_mipsel.deb) ...
Selecting previously unselected package libblas-dev.
@@ -788,19 +474,19 @@ Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_mipsel.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_mipsel.deb) ...
Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_mipsel.deb) ...
+Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-6_mipsel.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_mipsel.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_mipsel.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_mipsel.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_mipsel.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_mipsel.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_mipsel.deb) ...
Selecting previously unselected package zlib1g-dev.
Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_mipsel.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_mipsel.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_mipsel.deb) ...
Selecting previously unselected package libreadline6-dev.
Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_mipsel.deb) ...
Selecting previously unselected package libreadline-dev.
@@ -808,7 +494,7 @@ Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_mipsel.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../archives/zip_3.0-4_mipsel.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../unzip_6.0-5_mipsel.deb) ...
+Unpacking unzip (from .../unzip_6.0-6_mipsel.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -816,37 +502,40 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_mipsel.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_mipsel.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_mipsel.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_mipsel.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Setting up libmagic1 (5.11-1) ...
+Setting up libpcre3 (1:8.30-4) ...
+Setting up libexpat1 (2.1.0-1) ...
+Setting up libfreetype6 (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
Setting up libfontconfig1 (2.8.0-3.1) ...
Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
+Setting up libpng12-0 (1.2.49-1) ...
+Setting up libxau6 (1:1.0.7-1) ...
Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libxcb1 (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
+Setting up libxcb-render0 (1.8.1-1) ...
+Setting up libxcb-shm0 (1.8.1-1) ...
Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
+Setting up libcairo2 (1.12.0-2) ...
Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libglib2.0-0 (2.32.0-3) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
+Setting up libcroco3 (0.6.5-1) ...
Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libgfortran3 (4.7.0-2) ...
+Setting up libgomp1 (4.7.0-2) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
+Setting up libice6 (2:1.0.8-2) ...
Setting up libjpeg8 (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
Setting up libthai0 (0.1.17-1) ...
@@ -854,28 +543,36 @@ Setting up libxft2 (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
+Setting up libpango1.0-0 (1.30.0-1) ...
+Setting up libpcrecpp0 (1:8.30-4) ...
+Setting up libsm6 (2:1.2.1-2) ...
+Setting up libtiff4 (3.9.6-2) ...
Setting up libunistring0 (0.9.3-5) ...
Setting up libxext6 (2:1.3.0-3) ...
Setting up libxss1 (1:1.2.1-2) ...
Setting up libxt6 (1:1.1.1-2) ...
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.1-1) ...
+Setting up bsdmainutils (9.0.1) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up gcc-4.6-base (4.6.3-2) ...
+Setting up cpp-4.6 (4.6.3-2) ...
+Setting up gcc-4.6 (4.6.3-2) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
+Setting up cpp (4:4.6.3-4) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gcc (4:4.6.3-4) ...
+Setting up gfortran-4.6 (4.6.3-2) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
@@ -887,110 +584,40 @@ Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
+Setting up libpcre3-dev (1:8.30-4) ...
Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
+Setting up libpng12-dev (1.2.49-1) ...
Setting up libreadline6-dev (6.2-8) ...
Setting up libreadline-dev (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.0-1) ...
+Setting up g++-4.6 (4.6.3-2) ...
+Setting up libstdc++6-4.6-dev (4.6.3-2) ...
Removing negative dependencies:
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 54 not upgraded.
Checking correctness of dependencies...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-Kernel: Linux 2.6.32-5-sb1-bcm91250a mipsel (mips64)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.4-1
-Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpio_2.11-7 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dmsetup_2:1.02.67-2 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-3 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdevmapper1.02.1_2:1.02.67-2 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-3 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libncurses5-dev_5.9-4 libncursesw5_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libprocps0_1:3.3.2-3 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-2 libsepol1_2.1.4-1 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42-1 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libudev0_175-3.1 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.4-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 module-init-tools_3.16-1 mount_2.20.1-1.2 multiarch-support_2.13-26 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 procps_1:3.3.2-3 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 udev_175-3.1 unzip_6.0-5 util-linux_2.20.1-1.2 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Kernel: Linux 2.6.39-3-loongson-2e mipsel (mips64)
+Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-2 gcc-4.6_4.6.3-2 libc6-dev_2.13-26 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-2 linux-libc-dev_3.2.4-1
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3 cpp_4:4.6.3-4 cpp-4.6_4.6.3-2 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-2 gcc_4:4.6.3-4 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-2 gcc-4.6-base_4.6.3-2 gcc-4.7-base_4.7.0-2 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-2 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-7 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-26 libc-dev-bin_2.13-26 libc6_2.13-26 libc6-dev_2.13-26 libcairo2_1.12.0-2 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-2 libgdbm3_1.8.3-10 libgfortran3_4.7.0-2 libglib2.0-0_2.32.0-3 libgmp10_2:5.0.3+dfsg-1 libgomp1_4.7.0-2 libice6_2:1.0.8-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-6 libncurses5-dev_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-6 libsm6_2:1.2.1-2 libss2_1.42-1 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-2 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.4-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-26 ncurses-base_5.9-4 ncurses-bin_5.9-6 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-7 po-debconf_1.0.16+nmu2 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-1.2 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -1000,49 +627,13 @@ Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binu
Unpack source
─────────────
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -1051,45 +642,9 @@ Check disc space
dpkg-buildpackage
─────────────────
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture mipsel
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -1097,9 +652,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -1133,10 +688,10 @@ rm -f config.log config.status
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
-/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) insteadmake[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
+
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -1144,9 +699,9 @@ if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -1160,44 +715,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -g0 -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g0 -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -1236,7 +791,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-mipsel-iphN8c/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -1261,72 +816,67 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_mipsel.deb'.
- dpkg-genchanges -B -mmipsel Build Daemon (mayer) <buildd_mips-mayer at buildd.debian.org> >../r-bioc-limma_3.10.3-1_mipsel.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_mipsel.deb'.
+ dpkg-genchanges -B -mmipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_mipsel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0606
+Build finished at 20120412-0509
-r-bioc-limma_3.10.3-1_mipsel.changes:
+r-bioc-limma_3.12.0~dfsg-1_mipsel.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: mipsel
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: mipsel Build Daemon (mayer) <buildd_mips-mayer at buildd.debian.org>
+Maintainer: mipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 481412812c83e1f08fdd33f7f5a2feabc972c3e6 1473698 r-bioc-limma_3.10.3-1_mipsel.deb
+ 51aa09c772e3c5510f3207dcbe29181953ad4abb 806304 r-bioc-limma_3.12.0~dfsg-1_mipsel.deb
Checksums-Sha256:
- b5835ee2a9aa2aa1d3a341902f1d5c9f63c95bf12ad9e5ffee322948964fb29a 1473698 r-bioc-limma_3.10.3-1_mipsel.deb
+ 0c6604b3c9e483e70ff6a548bb04c45e314031b499c0184f26a2b6d32262eeec 806304 r-bioc-limma_3.12.0~dfsg-1_mipsel.deb
Files:
- d11b0c0b5d0de907207bbd47cda82e08 1473698 gnu-r optional r-bioc-limma_3.10.3-1_mipsel.deb
+ a751dac436d9bce200b7b445102f1ef1 806304 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_mipsel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_mipsel.deb
-────────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_mipsel.deb
+─────────────────────────────────────
new debian package, version 2.0.
- size 1473698 bytes: control archive= 1569 bytes.
- 770 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 806304 bytes: control archive= 1545 bytes.
+ 774 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: mipsel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1681
- Depends: libc6 (>= 2.2), r-base-core (>= 2.14.2-1)
+ Installed-Size: 984
+ Depends: libc6 (>= 2.2), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -1338,52 +888,51 @@ r-bioc-limma_3.10.3-1_mipsel.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 06:06 ./
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-Removing zlib1g-dev ...
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [sid-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [sid-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [sid-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [wheezy-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [wheezy-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [wheezy-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [squeeze-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [squeeze-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
-W: line 8 [lenny-security-mipsel-sbuild]: Deprecated key 'run-setup-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 9 [lenny-security-mipsel-sbuild]: Deprecated key 'run-exec-scripts' used
-I: This option will be removed in the future; please update your configuration
-W: line 4 [lenny-security-mipsel-sbuild]: Deprecated key 'location' used
-I: This option will be removed in the future; please update your configuration
+Purging /var/lib/schroot/mount/sid-mipsel-sbuild-5b96f965-8ec0-4630-8a72-dc3bf7b7f74c/build/buildd-r-bioc-limma_3.12.0~dfsg-1-mipsel-ghcb_b
+Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: mipsel
-Build-Space: 5332
-Build-Time: 115
+Build-Space: 3268
+Build-Time: 145
Distribution: sid
-Install-Time: 112
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 278
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 261
-Source-Version: 3.10.3-1
-Space: 5332
+Package-Time: 581
+Source-Version: 3.12.0~dfsg-1
+Space: 3268
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0606
-Build needed 00:04:21, 5332k disc space
-Signature with key '8C9FAB20' requested:
+Finished at 20120412-0509
+Build needed 00:09:41, 3268k disc space
+Signature with key '7550FB2E' requested:
diff --git a/powerpc.log b/powerpc.log
index 6f13bef..42bad40 100644
--- a/powerpc.log
+++ b/powerpc.log
@@ -1,71 +1,69 @@
-From buildd at praetorius.debian.org Wed Mar 07 04:46:51 2012
-Return-path: <buildd at praetorius.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at parry.debian.org Thu Apr 12 03:35:44 2012
+Return-path: <buildd at parry.debian.org>
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at praetorius.debian.org>)
- id 1S58m2-00042Q-OD
- for logs at buildd.debian.org; Wed, 07 Mar 2012 04:46:51 +0000
-Received: from [2001:6b0:e:2a18:214:5eff:fe97:268a]
- (helo=praetorius.debian.org)
+ (Exim 4.72) (envelope-from <buildd at parry.debian.org>)
+ id 1SIAox-0007Q2-RC
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 03:35:44 +0000
+Received: from parry.debian.org ([140.211.15.153])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=praetorius.debian.org,
- EMAIL=hostmaster at praetorius.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at praetorius.debian.org>)
- id 1S58m1-0007CK-J8; Wed, 07 Mar 2012 04:46:49 +0000
-Received: from buildd by praetorius.debian.org with local (Exim 4.72)
- (envelope-from <buildd at praetorius.debian.org>)
- id 1S58m0-00089P-NZ; Wed, 07 Mar 2012 04:46:48 +0000
-Date: Wed, 07 Mar 2012 04:46:48 +0000
-Message-Id: <E1S58m0-00089P-NZ at praetorius.debian.org>
-From: buildd on praetorius <buildd at praetorius.debian.org>
-To: wouter at debian.org,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on powerpc
+ CN=parry.debian.org, EMAIL=hostmaster at parry.debian.org (verified)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ (Exim 4.72) (envelope-from <buildd at parry.debian.org>)
+ id 1SIAow-0007hw-6x; Thu, 12 Apr 2012 03:35:43 +0000
+Received: from buildd by parry.debian.org with local (Exim 4.72)
+ (envelope-from <buildd at parry.debian.org>)
+ id 1SIAow-000651-1s; Thu, 12 Apr 2012 03:35:42 +0000
+Date: Thu, 12 Apr 2012 03:35:42 +0000
+Message-Id: <E1SIAow-000651-1s at parry.debian.org>
+From: buildd on parry <buildd at parry.debian.org>
+To: phil+buildd at philkern.de,logs at buildd.debian.org
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on powerpc
(dist=sid)
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on praetorius.debian.org
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on parry.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (powerpc) 07 Mar 2012 04:42 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (powerpc) 12 Apr 2012 03:31 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: powerpc
-Get:1 http://ftp.se.debian.org unstable InRelease [197 kB]
-Get:2 http://ftp.se.debian.org unstable/main Sources [6225 kB]
-Get:3 http://incoming.debian.org unstable InRelease [197 kB]
-Get:4 http://ftp.se.debian.org unstable/contrib Sources [55.0 kB]
-Get:5 http://ftp.se.debian.org unstable/non-free Sources [98.5 kB]
-Get:6 http://ftp.se.debian.org unstable/main powerpc Packages [5806 kB]
-Get:7 http://ftp.se.debian.org unstable/contrib powerpc Packages [37.0 kB]
-Ign http://ftp.se.debian.org unstable/contrib TranslationIndex
-Get:8 http://ftp.se.debian.org unstable/main TranslationIndex [2154 B]
-Get:9 http://ftp.se.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:10 http://ftp.se.debian.org unstable/main Translation-en [3906 kB]
+Get:1 http://debian.osuosl.org unstable InRelease [208 kB]
+Get:2 http://debian.osuosl.org unstable/main Sources [6216 kB]
+Get:3 http://incoming.debian.org unstable InRelease [208 kB]
+Get:4 http://debian.osuosl.org unstable/contrib Sources [54.5 kB]
+Get:5 http://debian.osuosl.org unstable/non-free Sources [97.8 kB]
+Get:6 http://debian.osuosl.org unstable/main powerpc Packages [5871 kB]
+Get:7 http://debian.osuosl.org unstable/contrib powerpc Packages [36.9 kB]
+Ign http://debian.osuosl.org unstable/contrib TranslationIndex
+Get:8 http://debian.osuosl.org unstable/main TranslationIndex [2223 B]
+Get:9 http://debian.osuosl.org unstable/contrib Translation-en [37.0 kB]
+Get:10 http://debian.osuosl.org unstable/main Translation-en [3936 kB]
Ign http://incoming.debian.org InRelease
Get:11 http://incoming.debian.org Release.gpg [836 B]
-Get:12 http://incoming.debian.org unstable/main Sources [6231 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [55.0 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [98.8 kB]
-Get:15 http://incoming.debian.org unstable/main powerpc Packages [5808 kB]
-Get:16 http://incoming.debian.org unstable/contrib powerpc Packages [37.0 kB]
+Get:12 http://incoming.debian.org unstable/main Sources [6221 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [54.5 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.7 kB]
+Get:15 http://incoming.debian.org unstable/main powerpc Packages [5871 kB]
+Get:16 http://incoming.debian.org unstable/contrib powerpc Packages [36.9 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:17 http://incoming.debian.org unstable/main TranslationIndex [2154 B]
-Get:18 http://incoming.debian.org Release [1616 B]
-Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:20 http://incoming.debian.org unstable/main Translation-en [3906 kB]
-Get:21 http://incoming.debian.org Sources [64.3 kB]
-Get:22 http://incoming.debian.org Packages [853 kB]
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3936 kB]
+Get:21 http://incoming.debian.org Sources [42.9 kB]
+Get:22 http://incoming.debian.org Packages [682 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.7 MB in 28s (1178 kB/s)
+Fetched 33.7 MB in 18s (1852 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -86,11 +84,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 2s (484 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 0s (351 kB/s)
Download complete and in download only mode
Check arch
@@ -110,12 +108,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 59 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 32 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 59 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 32 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -124,305 +122,320 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
Checking for already installed dependencies...
-base-files: already installed (6.5)
+base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-1)
-coreutils: already installed (8.13-3)
-dash: already installed (0.5.7-2)
-debianutils: already installed (4.1)
-diffutils: already installed (1:3.2-1)
-dpkg: already installed (1.16.1.2)
-e2fsprogs: already installed (1.42-1)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.2.1)
+diffutils: already installed (1:3.2-2)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.1-2)
findutils: already installed (4.4.2-4)
grep: already installed (2.10-1)
-gzip: already installed (1.4-2)
-hostname: already installed (3.10)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
ncurses-base: already installed (5.9-4)
ncurses-bin: already installed (5.9-4)
-perl-base: already installed (5.14.2-6)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-18)
-sysvinit: already installed (2.88dsf-18)
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
tar: already installed (1.26-4)
-bsdutils: already installed (1:2.20.1-1.2)
-mount: already installed (2.20.1-1.2)
-util-linux: already installed (2.20.1-1.2)
-libc6-dev: already installed (2.13-24)
+bsdutils: already installed (1:2.20.1-4)
+mount: already installed (2.20.1-4)
+util-linux: already installed (2.20.1-4)
+libc6-dev: already installed (2.13-27)
gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
- gcc-4.6 gcc-4.6-base gettext gettext-base gfortran gfortran-4.6 groff-base
- html2text intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2
- libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgcc1
- libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libstdc++6 libstdc++6-4.6-dev libthai-data libthai0 libtiff4
- libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
- libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
- libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core ucf unzip
- x11-common xdg-utils zip zlib1g zlib1g-dev
+ bsdmainutils cpp cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
+ gcc gcc-4.6 gcc-4.6-base gcc-4.7-base gettext gettext-base gfortran
+ gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf
+ libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1
+ libfreetype6 libgcc1 libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5
+ libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev
+ libthai-data libthai0 libtiff4 libtinfo-dev libtinfo5 libunistring0 libx11-6
+ libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
+ libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
+ r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip
+ zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make curl
- defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-4.6-multilib
- libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg libquadmath-dbg libmudflap0-dbg
- binutils-gold gettext-doc gfortran-multilib gfortran-doc
- gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
- ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
- r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
- texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
- texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
- texi2html tclreadline gvfs-bin
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ curl defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib
+ manpages-dev autoconf automake1.9 libtool flex bison gdb gcc-doc
+ gcc-4.6-multilib libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg
+ libquadmath-dbg libmudflap0-dbg binutils-gold gettext-doc gfortran-multilib
+ gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff
+ ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp
+ ttf-arphic-gkai00mp ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser
+ libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
+ texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
+ texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
+ texlive-latex-extra texinfo texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info libgpm2
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext
- gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian
- libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi5 libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
- libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
- po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip
- x11-common xdg-utils zip zlib1g-dev
+ bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config
+ gcc-4.7-base gettext gettext-base gfortran gfortran-4.6 groff-base html2text
+ intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2 libcroco3
+ libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgfortran3
+ libglib2.0-0 libice6 libjpeg8 libjpeg8-dev liblapack-dev liblapack3gf
+ libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1
+ libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff4
+ libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
+ libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
+ libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core
+ unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libgcc1 libgomp1 libstdc++6
- libstdc++6-4.6-dev zlib1g
-9 upgraded, 77 newly installed, 0 to remove and 50 not upgraded.
-Need to get 75.3 MB of archives.
-After this operation, 118 MB of additional disk space will be used.
-Get:1 http://ftp.se.debian.org/debian/ unstable/main libgomp1 powerpc 4.6.3-1 [26.4 kB]
-Get:2 http://ftp.se.debian.org/debian/ unstable/main gcc-4.6-base powerpc 4.6.3-1 [139 kB]
-Get:3 http://ftp.se.debian.org/debian/ unstable/main libgcc1 powerpc 1:4.6.3-1 [43.1 kB]
-Get:4 http://ftp.se.debian.org/debian/ unstable/main cpp-4.6 powerpc 4.6.3-1 [4618 kB]
-Get:5 http://ftp.se.debian.org/debian/ unstable/main libstdc++6-4.6-dev powerpc 4.6.3-1 [1693 kB]
-Get:6 http://ftp.se.debian.org/debian/ unstable/main g++-4.6 powerpc 4.6.3-1 [6661 kB]
-Get:7 http://ftp.se.debian.org/debian/ unstable/main gcc-4.6 powerpc 4.6.3-1 [4956 kB]
-Get:8 http://ftp.se.debian.org/debian/ unstable/main libstdc++6 powerpc 4.6.3-1 [372 kB]
-Get:9 http://ftp.se.debian.org/debian/ unstable/main zlib1g powerpc 1:1.2.6.dfsg-2 [84.9 kB]
-Get:10 http://ftp.se.debian.org/debian/ unstable/main libpipeline1 powerpc 1.2.1-1 [38.5 kB]
-Get:11 http://ftp.se.debian.org/debian/ unstable/main libmagic1 powerpc 5.10-1 [255 kB]
-Get:12 http://ftp.se.debian.org/debian/ unstable/main libpcre3 powerpc 8.12-4 [222 kB]
-Get:13 http://ftp.se.debian.org/debian/ unstable/main libexpat1 powerpc 2.0.1-7.2 [138 kB]
-Get:14 http://ftp.se.debian.org/debian/ unstable/main libfreetype6 powerpc 2.4.8-1 [423 kB]
-Get:15 http://ftp.se.debian.org/debian/ unstable/main ucf all 3.0025+nmu2 [70.6 kB]
-Get:16 http://ftp.se.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
-Get:17 http://ftp.se.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
-Get:18 http://ftp.se.debian.org/debian/ unstable/main libfontconfig1 powerpc 2.8.0-3.1 [281 kB]
-Get:19 http://ftp.se.debian.org/debian/ unstable/main libpixman-1-0 powerpc 0.24.4-1 [364 kB]
-Get:20 http://ftp.se.debian.org/debian/ unstable/main libpng12-0 powerpc 1.2.47-1 [186 kB]
-Get:21 http://ftp.se.debian.org/debian/ unstable/main libxau6 powerpc 1:1.0.6-4 [17.0 kB]
-Get:22 http://ftp.se.debian.org/debian/ unstable/main libxdmcp6 powerpc 1:1.1.0-4 [23.0 kB]
-Get:23 http://ftp.se.debian.org/debian/ unstable/main libxcb1 powerpc 1.8-2 [45.0 kB]
-Get:24 http://ftp.se.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
-Get:25 http://ftp.se.debian.org/debian/ unstable/main libx11-6 powerpc 2:1.4.4-4 [868 kB]
-Get:26 http://ftp.se.debian.org/debian/ unstable/main libxcb-render0 powerpc 1.8-2 [17.2 kB]
-Get:27 http://ftp.se.debian.org/debian/ unstable/main libxcb-shm0 powerpc 1.8-2 [10.0 kB]
-Get:28 http://ftp.se.debian.org/debian/ unstable/main libxrender1 powerpc 1:0.9.6-2 [30.7 kB]
-Get:29 http://ftp.se.debian.org/debian/ unstable/main libcairo2 powerpc 1.10.2-7 [923 kB]
-Get:30 http://ftp.se.debian.org/debian/ unstable/main libffi5 powerpc 3.0.10-3 [25.5 kB]
-Get:31 http://ftp.se.debian.org/debian/ unstable/main libglib2.0-0 powerpc 2.30.2-6 [1800 kB]
-Get:32 http://ftp.se.debian.org/debian/ unstable/main libxml2 powerpc 2.7.8.dfsg-7 [842 kB]
-Get:33 http://ftp.se.debian.org/debian/ unstable/main libcroco3 powerpc 0.6.4-2 [142 kB]
-Get:34 http://ftp.se.debian.org/debian/ unstable/main libdatrie1 powerpc 0.2.5-3 [27.7 kB]
-Get:35 http://ftp.se.debian.org/debian/ unstable/main libgfortran3 powerpc 4.6.3-1 [281 kB]
-Get:36 http://ftp.se.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
-Get:37 http://ftp.se.debian.org/debian/ unstable/main libice6 powerpc 2:1.0.7-2 [53.0 kB]
-Get:38 http://ftp.se.debian.org/debian/ unstable/main libjpeg8 powerpc 8d-1 [130 kB]
-Get:39 http://ftp.se.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
-Get:40 http://ftp.se.debian.org/debian/ unstable/main libthai0 powerpc 0.1.17-1 [44.0 kB]
-Get:41 http://ftp.se.debian.org/debian/ unstable/main libxft2 powerpc 2.2.0-3 [57.6 kB]
-Get:42 http://ftp.se.debian.org/debian/ unstable/main fontconfig powerpc 2.8.0-3.1 [334 kB]
-Get:43 http://ftp.se.debian.org/debian/ unstable/main libpango1.0-0 powerpc 1.29.4-2 [447 kB]
-Get:44 http://ftp.se.debian.org/debian/ unstable/main libpcrecpp0 powerpc 8.12-4 [113 kB]
-Get:45 http://ftp.se.debian.org/debian/ unstable/main libsm6 powerpc 2:1.2.0-2 [28.6 kB]
-Get:46 http://ftp.se.debian.org/debian/ unstable/main libtiff4 powerpc 3.9.6-1 [200 kB]
-Get:47 http://ftp.se.debian.org/debian/ unstable/main libunistring0 powerpc 0.9.3-5 [421 kB]
-Get:48 http://ftp.se.debian.org/debian/ unstable/main libxext6 powerpc 2:1.3.0-3 [49.3 kB]
-Get:49 http://ftp.se.debian.org/debian/ unstable/main libxss1 powerpc 1:1.2.1-2 [16.5 kB]
-Get:50 http://ftp.se.debian.org/debian/ unstable/main libxt6 powerpc 1:1.1.1-2 [191 kB]
-Get:51 http://ftp.se.debian.org/debian/ unstable/main bsdmainutils powerpc 9.0.1 [208 kB]
-Get:52 http://ftp.se.debian.org/debian/ unstable/main groff-base powerpc 1.21-6 [1179 kB]
-Get:53 http://ftp.se.debian.org/debian/ unstable/main man-db powerpc 2.6.1-1 [1055 kB]
-Get:54 http://ftp.se.debian.org/debian/ unstable/main file powerpc 5.10-1 [52.9 kB]
-Get:55 http://ftp.se.debian.org/debian/ unstable/main gettext-base powerpc 0.18.1.1-5 [132 kB]
-Get:56 http://ftp.se.debian.org/debian/ unstable/main cdbs all 0.4.105 [78.7 kB]
-Get:57 http://ftp.se.debian.org/debian/ unstable/main html2text powerpc 1.3.2a-15 [105 kB]
-Get:58 http://ftp.se.debian.org/debian/ unstable/main gettext powerpc 0.18.1.1-5 [2036 kB]
-Get:59 http://ftp.se.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:60 http://ftp.se.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:61 http://ftp.se.debian.org/debian/ unstable/main debhelper all 9.20120115 [693 kB]
-Get:62 http://ftp.se.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
-Get:63 http://ftp.se.debian.org/debian/ unstable/main gfortran-4.6 powerpc 4.6.3-1 [5270 kB]
-Get:64 http://ftp.se.debian.org/debian/ unstable/main gfortran powerpc 4:4.6.2-4 [1130 B]
-Get:65 http://ftp.se.debian.org/debian/ unstable/main libblas3gf powerpc 1.2.20110419-2 [192 kB]
-Get:66 http://ftp.se.debian.org/debian/ unstable/main libblas-dev powerpc 1.2.20110419-2 [206 kB]
-Get:67 http://ftp.se.debian.org/debian/ unstable/main libbz2-dev powerpc 1.0.6-1 [34.5 kB]
-Get:68 http://ftp.se.debian.org/debian/ unstable/main libjpeg8-dev powerpc 8d-1 [236 kB]
-Get:69 http://ftp.se.debian.org/debian/ unstable/main liblapack3gf powerpc 3.3.1-1 [3956 kB]
-Get:70 http://ftp.se.debian.org/debian/ unstable/main liblapack-dev powerpc 3.3.1-1 [4261 kB]
-Get:71 http://ftp.se.debian.org/debian/ unstable/main libtinfo-dev powerpc 5.9-4 [105 kB]
-Get:72 http://ftp.se.debian.org/debian/ unstable/main libncurses5-dev powerpc 5.9-4 [392 kB]
-Get:73 http://ftp.se.debian.org/debian/ unstable/main libpaper1 powerpc 1.1.24+nmu1 [21.5 kB]
-Get:74 http://ftp.se.debian.org/debian/ unstable/main libpaper-utils powerpc 1.1.24+nmu1 [18.0 kB]
-Get:75 http://ftp.se.debian.org/debian/ unstable/main libpcre3-dev powerpc 8.12-4 [313 kB]
-Get:76 http://ftp.se.debian.org/debian/ unstable/main zlib1g-dev powerpc 1:1.2.6.dfsg-2 [209 kB]
-Get:77 http://ftp.se.debian.org/debian/ unstable/main libpng12-dev powerpc 1.2.47-1 [267 kB]
-Get:78 http://ftp.se.debian.org/debian/ unstable/main libreadline6-dev powerpc 6.2-8 [258 kB]
-Get:79 http://ftp.se.debian.org/debian/ unstable/main libreadline-dev powerpc 6.2-8 [896 B]
-Get:80 http://ftp.se.debian.org/debian/ unstable/main zip powerpc 3.0-4 [340 kB]
-Get:81 http://ftp.se.debian.org/debian/ unstable/main unzip powerpc 6.0-5 [188 kB]
-Get:82 http://ftp.se.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
-Get:83 http://ftp.se.debian.org/debian/ unstable/main tcl8.5 powerpc 8.5.11-1 [1628 kB]
-Get:84 http://ftp.se.debian.org/debian/ unstable/main tk8.5 powerpc 8.5.11-1 [1167 kB]
-Get:85 http://ftp.se.debian.org/debian/ unstable/main r-base-core powerpc 2.14.2-1 [20.1 MB]
-Get:86 http://ftp.se.debian.org/debian/ unstable/main r-base-dev all 2.14.2-1 [3894 B]
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base libgcc1 libgomp1 libncurses5
+ libpcre3 libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin
+14 upgraded, 76 newly installed, 0 to remove and 18 not upgraded.
+Need to get 76.8 MB of archives.
+After this operation, 117 MB of additional disk space will be used.
+Get:1 http://debian.osuosl.org/debian/ unstable/main ncurses-bin powerpc 5.9-6 [331 kB]
+Get:2 http://debian.osuosl.org/debian/ unstable/main gcc-4.7-base powerpc 4.7.0-3 [139 kB]
+Get:3 http://debian.osuosl.org/debian/ unstable/main libgcc1 powerpc 1:4.7.0-3 [43.4 kB]
+Get:4 http://debian.osuosl.org/debian/ unstable/main libstdc++6 powerpc 4.7.0-3 [379 kB]
+Get:5 http://debian.osuosl.org/debian/ unstable/main libtinfo5 powerpc 5.9-6 [271 kB]
+Get:6 http://debian.osuosl.org/debian/ unstable/main libncurses5 powerpc 5.9-6 [289 kB]
+Get:7 http://debian.osuosl.org/debian/ unstable/main libpipeline1 powerpc 1.2.1-1 [38.5 kB]
+Get:8 http://debian.osuosl.org/debian/ unstable/main libmagic1 powerpc 5.11-1 [257 kB]
+Get:9 http://debian.osuosl.org/debian/ unstable/main libpcre3 powerpc 1:8.30-4 [241 kB]
+Get:10 http://debian.osuosl.org/debian/ unstable/main libexpat1 powerpc 2.1.0-1 [142 kB]
+Get:11 http://debian.osuosl.org/debian/ unstable/main libfreetype6 powerpc 2.4.9-1 [432 kB]
+Get:12 http://debian.osuosl.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:13 http://debian.osuosl.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:14 http://debian.osuosl.org/debian/ unstable/main libfontconfig1 powerpc 2.8.0-3.1 [281 kB]
+Get:15 http://debian.osuosl.org/debian/ unstable/main libpixman-1-0 powerpc 0.24.4-1 [364 kB]
+Get:16 http://debian.osuosl.org/debian/ unstable/main libpng12-0 powerpc 1.2.49-1 [185 kB]
+Get:17 http://debian.osuosl.org/debian/ unstable/main libxau6 powerpc 1:1.0.7-1 [18.5 kB]
+Get:18 http://debian.osuosl.org/debian/ unstable/main libxdmcp6 powerpc 1:1.1.0-4 [23.0 kB]
+Get:19 http://debian.osuosl.org/debian/ unstable/main libxcb1 powerpc 1.8.1-1 [45.3 kB]
+Get:20 http://debian.osuosl.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
+Get:21 http://debian.osuosl.org/debian/ unstable/main libx11-6 powerpc 2:1.4.4-4 [868 kB]
+Get:22 http://debian.osuosl.org/debian/ unstable/main libxcb-render0 powerpc 1.8.1-1 [17.2 kB]
+Get:23 http://debian.osuosl.org/debian/ unstable/main libxcb-shm0 powerpc 1.8.1-1 [10.1 kB]
+Get:24 http://debian.osuosl.org/debian/ unstable/main libxrender1 powerpc 1:0.9.6-2 [30.7 kB]
+Get:25 http://debian.osuosl.org/debian/ unstable/main libcairo2 powerpc 1.12.0-2 [882 kB]
+Get:26 http://debian.osuosl.org/debian/ unstable/main libffi5 powerpc 3.0.10-3 [25.5 kB]
+Get:27 http://debian.osuosl.org/debian/ unstable/main libglib2.0-0 powerpc 2.32.0-4 [2019 kB]
+Get:28 http://debian.osuosl.org/debian/ unstable/main libxml2 powerpc 2.7.8.dfsg-7 [842 kB]
+Get:29 http://debian.osuosl.org/debian/ unstable/main libcroco3 powerpc 0.6.5-1 [143 kB]
+Get:30 http://debian.osuosl.org/debian/ unstable/main libdatrie1 powerpc 0.2.5-3 [27.7 kB]
+Get:31 http://debian.osuosl.org/debian/ unstable/main libgfortran3 powerpc 4.7.0-3 [286 kB]
+Get:32 http://debian.osuosl.org/debian/ unstable/main libgomp1 powerpc 4.7.0-3 [29.1 kB]
+Get:33 http://debian.osuosl.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
+Get:34 http://debian.osuosl.org/debian/ unstable/main libice6 powerpc 2:1.0.7-2 [53.0 kB]
+Get:35 http://debian.osuosl.org/debian/ unstable/main libjpeg8 powerpc 8d-1 [130 kB]
+Get:36 http://debian.osuosl.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
+Get:37 http://debian.osuosl.org/debian/ unstable/main libthai0 powerpc 0.1.17-1 [44.0 kB]
+Get:38 http://debian.osuosl.org/debian/ unstable/main libxft2 powerpc 2.2.0-3 [57.6 kB]
+Get:39 http://debian.osuosl.org/debian/ unstable/main fontconfig powerpc 2.8.0-3.1 [334 kB]
+Get:40 http://debian.osuosl.org/debian/ unstable/main libpango1.0-0 powerpc 1.30.0-1 [451 kB]
+Get:41 http://debian.osuosl.org/debian/ unstable/main libpcrecpp0 powerpc 1:8.30-4 [126 kB]
+Get:42 http://debian.osuosl.org/debian/ unstable/main libsm6 powerpc 2:1.2.1-2 [33.2 kB]
+Get:43 http://debian.osuosl.org/debian/ unstable/main libtiff4 powerpc 3.9.6-2 [200 kB]
+Get:44 http://debian.osuosl.org/debian/ unstable/main libunistring0 powerpc 0.9.3-5 [421 kB]
+Get:45 http://debian.osuosl.org/debian/ unstable/main libxext6 powerpc 2:1.3.0-3 [49.3 kB]
+Get:46 http://debian.osuosl.org/debian/ unstable/main libxss1 powerpc 1:1.2.1-2 [16.5 kB]
+Get:47 http://debian.osuosl.org/debian/ unstable/main libxt6 powerpc 1:1.1.1-2 [191 kB]
+Get:48 http://debian.osuosl.org/debian/ unstable/main bsdmainutils powerpc 9.0.1 [208 kB]
+Get:49 http://debian.osuosl.org/debian/ unstable/main groff-base powerpc 1.21-7 [1179 kB]
+Get:50 http://debian.osuosl.org/debian/ unstable/main man-db powerpc 2.6.1-2 [1054 kB]
+Get:51 http://debian.osuosl.org/debian/ unstable/main g++-4.6 powerpc 4.6.3-3 [6677 kB]
+Get:52 http://debian.osuosl.org/debian/ unstable/main libstdc++6-4.6-dev powerpc 4.6.3-3 [1696 kB]
+Get:53 http://debian.osuosl.org/debian/ unstable/main gcc-4.6 powerpc 4.6.3-3 [4961 kB]
+Get:54 http://debian.osuosl.org/debian/ unstable/main cpp-4.6 powerpc 4.6.3-3 [4619 kB]
+Get:55 http://debian.osuosl.org/debian/ unstable/main gcc-4.6-base powerpc 4.6.3-3 [140 kB]
+Get:56 http://debian.osuosl.org/debian/ unstable/main file powerpc 5.11-1 [53.1 kB]
+Get:57 http://debian.osuosl.org/debian/ unstable/main gettext-base powerpc 0.18.1.1-5 [132 kB]
+Get:58 http://debian.osuosl.org/debian/ unstable/main cdbs all 0.4.109 [79.4 kB]
+Get:59 http://debian.osuosl.org/debian/ unstable/main cpp powerpc 4:4.6.3-4 [16.4 kB]
+Get:60 http://debian.osuosl.org/debian/ unstable/main html2text powerpc 1.3.2a-15 [105 kB]
+Get:61 http://debian.osuosl.org/debian/ unstable/main gettext powerpc 0.18.1.1-5 [2036 kB]
+Get:62 http://debian.osuosl.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:63 http://debian.osuosl.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:64 http://debian.osuosl.org/debian/ unstable/main debhelper all 9.20120410 [694 kB]
+Get:65 http://debian.osuosl.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
+Get:66 http://debian.osuosl.org/debian/ unstable/main gcc powerpc 4:4.6.3-4 [5028 B]
+Get:67 http://debian.osuosl.org/debian/ unstable/main gfortran-4.6 powerpc 4.6.3-3 [5273 kB]
+Get:68 http://debian.osuosl.org/debian/ unstable/main gfortran powerpc 4:4.6.3-4 [1134 B]
+Get:69 http://debian.osuosl.org/debian/ unstable/main libblas3gf powerpc 1.2.20110419-2 [192 kB]
+Get:70 http://debian.osuosl.org/debian/ unstable/main libblas-dev powerpc 1.2.20110419-2 [206 kB]
+Get:71 http://debian.osuosl.org/debian/ unstable/main libbz2-dev powerpc 1.0.6-1 [34.5 kB]
+Get:72 http://debian.osuosl.org/debian/ unstable/main libjpeg8-dev powerpc 8d-1 [236 kB]
+Get:73 http://debian.osuosl.org/debian/ unstable/main liblapack3gf powerpc 3.3.1-1 [3956 kB]
+Get:74 http://debian.osuosl.org/debian/ unstable/main liblapack-dev powerpc 3.3.1-1 [4261 kB]
+Get:75 http://debian.osuosl.org/debian/ unstable/main libtinfo-dev powerpc 5.9-6 [105 kB]
+Get:76 http://debian.osuosl.org/debian/ unstable/main libncurses5-dev powerpc 5.9-6 [393 kB]
+Get:77 http://debian.osuosl.org/debian/ unstable/main libpaper1 powerpc 1.1.24+nmu1 [21.5 kB]
+Get:78 http://debian.osuosl.org/debian/ unstable/main libpaper-utils powerpc 1.1.24+nmu1 [18.0 kB]
+Get:79 http://debian.osuosl.org/debian/ unstable/main libpcre3-dev powerpc 1:8.30-4 [357 kB]
+Get:80 http://debian.osuosl.org/debian/ unstable/main zlib1g-dev powerpc 1:1.2.6.dfsg-2 [209 kB]
+Get:81 http://debian.osuosl.org/debian/ unstable/main libpng12-dev powerpc 1.2.49-1 [266 kB]
+Get:82 http://debian.osuosl.org/debian/ unstable/main libreadline6-dev powerpc 6.2-8 [258 kB]
+Get:83 http://debian.osuosl.org/debian/ unstable/main libreadline-dev powerpc 6.2-8 [896 B]
+Get:84 http://debian.osuosl.org/debian/ unstable/main zip powerpc 3.0-4 [340 kB]
+Get:85 http://debian.osuosl.org/debian/ unstable/main unzip powerpc 6.0-6 [190 kB]
+Get:86 http://debian.osuosl.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:87 http://debian.osuosl.org/debian/ unstable/main tcl8.5 powerpc 8.5.11-1 [1628 kB]
+Get:88 http://debian.osuosl.org/debian/ unstable/main tk8.5 powerpc 8.5.11-1 [1167 kB]
+Get:89 http://debian.osuosl.org/debian/ unstable/main r-base-core powerpc 2.15.0-1 [20.3 MB]
+Get:90 http://debian.osuosl.org/debian/ unstable/main r-base-dev all 2.15.0-1 [3900 B]
debconf: delaying package configuration, since apt-utils is not installed
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+Unpacking replacement gcc-4.6 ...
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+Unpacking replacement cpp-4.6 ...
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+Unpacking replacement gcc-4.6-base:powerpc ...
Selecting previously unselected package file.
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Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_powerpc.deb) ...
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+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
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+Unpacking replacement cpp ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_powerpc.deb) ...
Selecting previously unselected package gettext.
@@ -432,47 +445,50 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
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-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
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Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
+Preparing to replace gcc 4:4.6.2-4 (using .../gcc_4%3a4.6.3-4_powerpc.deb) ...
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+Unpacking replacement gcc ...
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Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_powerpc.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_powerpc.deb) ...
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Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_powerpc.deb) ...
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-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_powerpc.deb) ...
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-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_powerpc.deb) ...
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+Selecting previously unselected package libreadline-dev:powerpc.
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Unpacking zip (from .../archives/zip_3.0-4_powerpc.deb) ...
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Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -480,120 +496,122 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_powerpc.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_powerpc.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_powerpc.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_powerpc.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libgomp1 (4.6.3-1) ...
-Setting up cpp-4.6 (4.6.3-1) ...
-Setting up gcc-4.6 (4.6.3-1) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libpcre3 (8.12-4) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
-Setting up ucf (3.0025+nmu2) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
+Setting up libpipeline1:powerpc (1.2.1-1) ...
+Setting up libmagic1:powerpc (5.11-1) ...
+Setting up libpcre3:powerpc (1:8.30-4) ...
+Setting up libexpat1:powerpc (2.1.0-1) ...
+Setting up libfreetype6:powerpc (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libpng12-0 (1.2.47-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
-Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libfontconfig1:powerpc (2.8.0-3.1) ...
+Setting up libpixman-1-0:powerpc (0.24.4-1) ...
+Setting up libpng12-0:powerpc (1.2.49-1) ...
+Setting up libxau6:powerpc (1:1.0.7-1) ...
+Setting up libxdmcp6:powerpc (1:1.1.0-4) ...
+Setting up libxcb1:powerpc (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libx11-6:powerpc (2:1.4.4-4) ...
+Setting up libxcb-render0:powerpc (1.8.1-1) ...
+Setting up libxcb-shm0:powerpc (1.8.1-1) ...
+Setting up libxrender1:powerpc (1:0.9.6-2) ...
+Setting up libcairo2:powerpc (1.12.0-2) ...
+Setting up libffi5:powerpc (3.0.10-3) ...
+Setting up libglib2.0-0:powerpc (2.32.0-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libcroco3:powerpc (0.6.5-1) ...
+Setting up libdatrie1:powerpc (0.2.5-3) ...
+Setting up libgfortran3:powerpc (4.7.0-3) ...
+Setting up libgomp1:powerpc (4.7.0-3) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
-Setting up libjpeg8 (8d-1) ...
+Setting up libice6:powerpc (2:1.0.7-2) ...
+Setting up libjpeg8:powerpc (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3) ...
+Setting up libthai0:powerpc (0.1.17-1) ...
+Setting up libxft2:powerpc (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5) ...
-Setting up libxext6 (2:1.3.0-3) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2) ...
+Setting up libpango1.0-0:powerpc (1.30.0-1) ...
+Setting up libpcrecpp0:powerpc (1:8.30-4) ...
+Setting up libsm6:powerpc (2:1.2.1-2) ...
+Setting up libtiff4:powerpc (3.9.6-2) ...
+Setting up libunistring0:powerpc (0.9.3-5) ...
+Setting up libxext6:powerpc (2:1.3.0-3) ...
+Setting up libxss1:powerpc (1:1.2.1-2) ...
+Setting up libxt6:powerpc (1:1.1.1-2) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.1-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up gcc-4.6-base:powerpc (4.6.3-3) ...
+Setting up cpp-4.6 (4.6.3-3) ...
+Setting up gcc-4.6 (4.6.3-3) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
+Setting up cpp (4:4.6.3-4) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gcc (4:4.6.3-4) ...
+Setting up gfortran-4.6 (4.6.3-3) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
Setting up libblas-dev (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
+Setting up libbz2-dev:powerpc (1.0.6-1) ...
+Setting up libjpeg8-dev:powerpc (8d-1) ...
Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev:powerpc (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8) ...
-Setting up libreadline-dev (6.2-8) ...
+Setting up libpcre3-dev (1:8.30-4) ...
+Setting up zlib1g-dev:powerpc (1:1.2.6.dfsg-2) ...
+Setting up libpng12-dev (1.2.49-1) ...
+Setting up libreadline6-dev:powerpc (6.2-8) ...
+Setting up libreadline-dev:powerpc (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
-Setting up libstdc++6-4.6-dev (4.6.3-1) ...
-Setting up g++-4.6 (4.6.3-1) ...
+Setting up r-base-dev (2.15.0-1) ...
+Setting up g++-4.6 (4.6.3-3) ...
+Setting up libstdc++6-4.6-dev (4.6.3-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 50 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 18 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-powerpc64 powerpc (ppc64)
-Toolchain package versions: binutils_2.22-3 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-24 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.1-1
-Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-3 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.1 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.4-base_4.4.6-14 gcc-4.5-base_4.5.3-10 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-18 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-24 libc-dev-bin_2.13-24 libc6_2.13-24 libc6-dev_2.13-24 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.2+dfsg-2 libgomp1_4.6.3-1 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libncurses5-dev_5.9-4 libpam-modules_1.1.3-6 libpam-modules-bin_1.1.3-6 libpam-runtime_1.1.3-6 libpam0g_1.1.3-6 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.0-4 libsepol1_2.1.0-1.2 libslang2_2.2.4-5 libsm6_2:1.2.0-2 libss2_1.42-1 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.1-1 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-24 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2.1 perl_5.14.2-6 perl-base_5.14.2-6 perl-modules_5.14.2-6 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p1-3 sysv-rc_2.88dsf-18 sysvinit_2.88dsf-18 sysvinit-utils_2.88dsf-18 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-1.2 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.12-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.5-base_4.5.3-12 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-3 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.12.0-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libgfortran3_4.7.0-3 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblocale-gettext-perl_1.05-7+b1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncurses5-dev_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-2 libslang2_2.2.4-7 libsm6_2:1.2.1-2 libss2_1.42.1-2 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b1 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.12-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-16 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -604,12 +622,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -619,8 +637,8 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture powerpc
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -628,9 +646,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -659,15 +677,15 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build
+ debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) insteadmake[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3'
-
+/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -675,9 +693,9 @@ if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -691,44 +709,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fpic -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -765,9 +783,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H/r-bioc-limma-3.10.3'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -792,72 +810,67 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_powerpc.deb'.
- dpkg-genchanges -B -mpowerpc Build Daemon (praetorius) <buildd_powerpc-praetorius at buildd.debian.org> >../r-bioc-limma_3.10.3-1_powerpc.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_powerpc.deb'.
+ dpkg-genchanges -B -mpowerpc Build Daemon (parry) <buildd_powerpc-parry at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_powerpc.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0446
+Build finished at 20120412-0335
-r-bioc-limma_3.10.3-1_powerpc.changes:
+r-bioc-limma_3.12.0~dfsg-1_powerpc.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: powerpc
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: powerpc Build Daemon (praetorius) <buildd_powerpc-praetorius at buildd.debian.org>
+Maintainer: powerpc Build Daemon (parry) <buildd_powerpc-parry at buildd.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- be4dc3fa935c797ffc70070e58042015df22d063 1473754 r-bioc-limma_3.10.3-1_powerpc.deb
+ 58c09bb61449f5b4b4ce32db0129cf9e2be830fa 808668 r-bioc-limma_3.12.0~dfsg-1_powerpc.deb
Checksums-Sha256:
- 2e0b3d00607eaf39c4f5bddeb6c1812aac05c4f7e92152272ef070d9c05c7485 1473754 r-bioc-limma_3.10.3-1_powerpc.deb
+ 31140a344b9f0747ff4e777fbb0985b83c83e573305e916ec232670e7010fe42 808668 r-bioc-limma_3.12.0~dfsg-1_powerpc.deb
Files:
- fadd0a69aa78d6a50a2df2dcc020617b 1473754 gnu-r optional r-bioc-limma_3.10.3-1_powerpc.deb
+ 99a3d7a373691e2dbf45ec4ef1b47ea3 808668 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_powerpc.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_powerpc.deb
-─────────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_powerpc.deb
+──────────────────────────────────────
new debian package, version 2.0.
- size 1473754 bytes: control archive= 1567 bytes.
- 773 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 808668 bytes: control archive= 1545 bytes.
+ 777 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: powerpc
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1680
- Depends: libc6 (>= 2.1.3), r-base-core (>= 2.14.2-1)
+ Installed-Size: 983
+ Depends: libc6 (>= 2.1.3), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -869,52 +882,51 @@ r-bioc-limma_3.10.3-1_powerpc.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 8456 2012-03-07 04:46 ./usr/lib/R/site-library/limma/libs/limma.so
--rwxr-xr-x root/root 1230 2012-03-07 04:46 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 2173 2012-03-07 04:46 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 6022 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 216 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 1057 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 5603 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 2886 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 518 2012-03-07 04:46 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 9458 2012-03-07 04:46 ./usr/lib/R/site-library/limma/INDEX
--rw-r--r-- root/root 1901 2012-03-07 04:46 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 2392 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 3278 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 1353 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 6221 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 459381 2012-03-07 04:46 ./usr/lib/R/site-library/limma/help/limma.rdb
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 34556 2012-03-07 04:46 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2012-03-07 04:46 ./usr/lib/R/site-library/limma/html/R.css
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 1711 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rwxr-xr-x root/root 89361 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 737677 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 42743 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rwxr-xr-x root/root 673 2012-03-07 04:46 ./usr/lib/R/site-library/limma/doc/index.html
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 383 2012-03-07 04:46 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 3765 2012-03-07 04:46 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 198258 2012-03-07 04:46 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 972 2012-03-07 04:46 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 04:46 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2012-03-07 04:46 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 560 2012-03-07 04:46 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 2302 2012-03-07 04:46 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 683 2012-04-12 03:35 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 2457 2012-04-12 03:35 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 27996 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 264 2012-04-12 03:35 ./usr/share/doc/r-bioc-limma/README.Debian
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/lib/R/site-library/limma/
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 8456 2012-04-12 03:35 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 9754 2012-04-12 03:35 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2012-04-12 03:35 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 35015 2012-04-12 03:35 ./usr/lib/R/site-library/limma/html/00Index.html
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 202049 2012-04-12 03:35 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 383 2012-04-12 03:35 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 3827 2012-04-12 03:35 ./usr/lib/R/site-library/limma/R/limma.rdx
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1375 2012-04-12 03:35 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 6317 2012-04-12 03:35 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 473118 2012-04-12 03:35 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3329 2012-04-12 03:35 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 2431 2012-04-12 03:35 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 3989 2012-04-12 03:35 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 5727 2012-04-12 03:35 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 220 2012-04-12 03:35 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 6157 2012-04-12 03:35 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 1055 2012-04-12 03:35 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 521 2012-04-12 03:35 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 2943 2012-04-12 03:35 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 972 2012-04-12 03:35 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rwxr-xr-x root/root 1230 2012-04-12 03:35 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 1901 2012-04-12 03:35 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2012-04-12 03:35 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 91993 2012-04-12 03:35 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rwxr-xr-x root/root 673 2012-04-12 03:35 ./usr/lib/R/site-library/limma/doc/index.html
+-rwxr-xr-x root/root 1711 2012-04-12 03:35 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 42743 2012-04-12 03:35 ./usr/lib/R/site-library/limma/doc/limma.pdf
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -928,7 +940,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-powerpc-sbuild-d3904f66-5c56-4b5a-955f-53d8a5395861/build/buildd-r-bioc-limma_3.10.3-1-powerpc-0ZHK8H
+Purging /var/lib/schroot/mount/sid-powerpc-sbuild-500c82fc-2ed8-4e1a-929c-206cd8a10dab/build/buildd-r-bioc-limma_3.12.0~dfsg-1-powerpc-RURGuK
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -936,18 +948,19 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: powerpc
-Build-Space: 5336
-Build-Time: 25
+Build-Space: 3248
+Build-Time: 16
Distribution: sid
-Install-Time: 160
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 205
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 231
-Source-Version: 3.10.3-1
-Space: 5336
+Package-Time: 249
+Source-Version: 3.12.0~dfsg-1
+Space: 3248
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0446
-Build needed 00:03:51, 5336k disc space
+Finished at 20120412-0335
+Build needed 00:04:09, 3248k disc space
+Signature with key '9811BFE6' requested:
diff --git a/s390.log b/s390.log
index 50300f3..1c31a99 100644
--- a/s390.log
+++ b/s390.log
@@ -1,71 +1,72 @@
-From buildd at zandonai.debian.org Wed Mar 07 04:48:51 2012
+From buildd at zandonai.debian.org Thu Apr 12 03:32:53 2012
Return-path: <buildd at zandonai.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+Received: from kokkonen.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b61])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
+ CN=kokkonen.debian.org,
+ EMAIL=hostmaster at kokkonen.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1S58nz-0004C7-DK
- for logs at buildd.debian.org; Wed, 07 Mar 2012 04:48:51 +0000
+ id 1SIAmD-00078Q-EE
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 03:32:53 +0000
Received: from zandonai.debian.org ([80.245.147.46])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=zandonai.debian.org,
EMAIL=hostmaster at zandonai.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ by kokkonen.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1S58ny-0007Oj-IA; Wed, 07 Mar 2012 04:48:50 +0000
+ id 1SIAmC-0007bk-HC; Thu, 12 Apr 2012 03:32:52 +0000
Received: from buildd by zandonai.debian.org with local (Exim 4.72)
(envelope-from <buildd at zandonai.debian.org>)
- id 1S58ny-0000PW-2r; Wed, 07 Mar 2012 04:48:50 +0000
-Message-Id: <E1S58ny-0000PW-2r at zandonai.debian.org>
+ id 1SIAmC-0007jE-4e; Thu, 12 Apr 2012 03:32:52 +0000
+Message-Id: <E1SIAmC-0007jE-4e at zandonai.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 7 Mar 2012 04:48:50 +0000
+Date: Thu, 12 Apr 2012 03:32:52 +0000
From: buildd on zandonai <buildd at zandonai.debian.org>
To: phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on s390 (dist=sid)
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on s390
+ (dist=sid)
Key-Id: E7C67939
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (s390) 07 Mar 2012 04:47 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (s390) 12 Apr 2012 03:31 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: s390
-Get:1 http://ftp.de.debian.org unstable InRelease [197 kB]
-Get:2 http://incoming.debian.org unstable InRelease [197 kB]
-Get:3 http://ftp.de.debian.org unstable/main Sources [6225 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [208 kB]
+Get:2 http://ftp.de.debian.org unstable/main Sources [6216 kB]
+Get:3 http://incoming.debian.org unstable InRelease [208 kB]
Ign http://incoming.debian.org InRelease
Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [6231 kB]
-Get:6 http://ftp.de.debian.org unstable/contrib Sources [55.0 kB]
-Get:7 http://ftp.de.debian.org unstable/non-free Sources [98.5 kB]
-Get:8 http://ftp.de.debian.org unstable/main s390 Packages [5709 kB]
+Get:5 http://ftp.de.debian.org unstable/contrib Sources [54.5 kB]
+Get:6 http://ftp.de.debian.org unstable/non-free Sources [97.8 kB]
+Get:7 http://ftp.de.debian.org unstable/main s390 Packages [5802 kB]
+Get:8 http://incoming.debian.org unstable/main Sources [6221 kB]
Get:9 http://ftp.de.debian.org unstable/contrib s390 Packages [36.7 kB]
Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
-Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2154 B]
-Get:11 http://ftp.de.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:12 http://ftp.de.debian.org unstable/main Translation-en [3906 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [55.0 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [98.8 kB]
-Get:15 http://incoming.debian.org unstable/main s390 Packages [5710 kB]
+Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
+Get:11 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:12 http://ftp.de.debian.org unstable/main Translation-en [3936 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [54.5 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.7 kB]
+Get:15 http://incoming.debian.org unstable/main s390 Packages [5802 kB]
Get:16 http://incoming.debian.org unstable/contrib s390 Packages [36.7 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:17 http://incoming.debian.org unstable/main TranslationIndex [2154 B]
-Get:18 http://incoming.debian.org Release [1616 B]
-Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:20 http://incoming.debian.org unstable/main Translation-en [3906 kB]
-Get:21 http://incoming.debian.org Sources [64.3 kB]
-Get:22 http://incoming.debian.org Packages [853 kB]
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3936 kB]
+Get:21 http://incoming.debian.org Sources [42.9 kB]
+Get:22 http://incoming.debian.org Packages [682 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.5 MB in 35s (940 kB/s)
+Fetched 33.5 MB in 19s (1755 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -86,11 +87,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 2s (343 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 1s (197 kB/s)
Download complete and in download only mode
Check arch
@@ -110,12 +111,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 45 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 45 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -124,75 +125,77 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
Checking for already installed dependencies...
-base-files: already installed (6.5)
+base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
bash: already installed (4.2-1)
-coreutils: already installed (8.13-3)
-dash: already installed (0.5.7-2)
-debianutils: already installed (4.2.1)
-diffutils: already installed (1:3.2-1)
-dpkg: already installed (1.16.1.2)
-e2fsprogs: already installed (1.42-1)
+coreutils: already installed (8.13-3.1)
+dash: already installed (0.5.7-3)
+debianutils: already installed (4.3)
+diffutils: already installed (1:3.2-2)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-1)
findutils: already installed (4.4.2-4)
grep: already installed (2.10-1)
-gzip: already installed (1.4-2)
-hostname: already installed (3.10)
-ncurses-base: already installed (5.9-4)
-ncurses-bin: already installed (5.9-4)
-perl-base: already installed (5.14.2-7)
+gzip: already installed (1.4-5)
+hostname: already installed (3.11)
+ncurses-base: already installed (5.9-5)
+ncurses-bin: already installed (5.9-5)
+perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
-login: already installed (1:4.1.4.2+svn3283-3)
-sysvinit-utils: already installed (2.88dsf-22)
-sysvinit: already installed (2.88dsf-22)
+login: already installed (1:4.1.5-1)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
tar: already installed (1.26-4)
-bsdutils: already installed (1:2.20.1-1.2)
-mount: already installed (2.20.1-1.2)
-util-linux: already installed (2.20.1-1.2)
-libc6-dev: already installed (2.13-25)
-gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+bsdutils: already installed (1:2.20.1-4)
+mount: already installed (2.20.1-4)
+util-linux: already installed (2.20.1-4)
+libc6-dev: already installed (2.13-27)
+gcc: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
- gcc-4.6 gcc-4.6-base gettext gettext-base gfortran gfortran-4.6 groff-base
- html2text intltool-debian libblas-dev libblas3gf libbz2-dev libcairo2
- libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6 libgcc1
- libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3gf libmagic1 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libstdc++6 libstdc++6-4.6-dev libthai-data libthai0 libtiff4
- libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
- libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
- libxt6 man-db po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip
- x11-common xdg-utils zip zlib1g zlib1g-dev
+ bsdmainutils cpp cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
+ gcc gcc-4.6 gcc-4.6-base gcc-4.7-base gettext gettext-base gfortran
+ gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf
+ libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1
+ libfreetype6 libgcc1 libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5
+ libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev
+ libthai-data libthai0 libtiff4 libtinfo-dev libtinfo5 libunistring0 libx11-6
+ libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
+ libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
+ r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip
+ zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make curl
- defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-4.6-multilib
- libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg libquadmath-dbg libmudflap0-dbg
- gettext-doc gfortran-multilib gfortran-doc gfortran-4.6-multilib
- gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
- ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ curl defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib
+ manpages-dev autoconf automake1.9 libtool flex bison gdb gcc-doc
+ gcc-4.6-multilib libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg
+ libquadmath-dbg libmudflap0-dbg gettext-doc gfortran-multilib gfortran-doc
+ gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
+ ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info libgpm2
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext
@@ -208,217 +211,234 @@ The following NEW packages will be installed:
po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip
x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libgcc1 libgomp1 libstdc++6
- libstdc++6-4.6-dev zlib1g
-9 upgraded, 76 newly installed, 0 to remove and 36 not upgraded.
-Need to get 68.0 MB of archives.
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base gcc-4.7-base libgcc1 libgomp1
+ libncurses5 libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin
+14 upgraded, 76 newly installed, 0 to remove and 12 not upgraded.
+Need to get 69.6 MB of archives.
After this operation, 115 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main libgomp1 s390 4.6.3-1 [30.5 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6-base s390 4.6.3-1 [139 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main libgcc1 s390 1:4.6.3-1 [31.2 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main cpp-4.6 s390 4.6.3-1 [3855 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libstdc++6-4.6-dev s390 4.6.3-1 [1677 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main g++-4.6 s390 4.6.3-1 [5882 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6 s390 4.6.3-1 [4171 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main libstdc++6 s390 4.6.3-1 [362 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main zlib1g s390 1:1.2.6.dfsg-2 [89.4 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390 1.2.1-1 [40.0 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390 5.10-1 [259 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390 8.12-4 [228 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main libexpat1 s390 2.0.1-7.2 [137 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 s390 2.4.8-1 [439 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 s390 2.8.0-3.1 [286 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 s390 0.24.4-1 [376 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 s390 1.2.47-1 [192 kB]
-Get:20 http://ftp.de.debian.org/debian/ unstable/main libxau6 s390 1:1.0.6-4 [17.1 kB]
-Get:21 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 s390 1:1.1.0-4 [23.8 kB]
-Get:22 http://ftp.de.debian.org/debian/ unstable/main libxcb1 s390 1.8-2 [53.0 kB]
-Get:23 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
-Get:24 http://ftp.de.debian.org/debian/ unstable/main libx11-6 s390 2:1.4.4-4 [892 kB]
-Get:25 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 s390 1.8-2 [18.9 kB]
-Get:26 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 s390 1.8-2 [10.2 kB]
-Get:27 http://ftp.de.debian.org/debian/ unstable/main libxrender1 s390 1:0.9.6-2 [31.2 kB]
-Get:28 http://ftp.de.debian.org/debian/ unstable/main libcairo2 s390 1.10.2-7 [976 kB]
-Get:29 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390 3.0.10-3 [25.3 kB]
-Get:30 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390 2.30.2-6 [1875 kB]
-Get:31 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390 2.7.8.dfsg-7 [882 kB]
-Get:32 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390 0.6.4-2 [149 kB]
-Get:33 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 s390 0.2.5-3 [29.7 kB]
-Get:34 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 s390 4.6.3-1 [296 kB]
-Get:35 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
-Get:36 http://ftp.de.debian.org/debian/ unstable/main libice6 s390 2:1.0.7-2 [57.1 kB]
-Get:37 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 s390 8d-1 [141 kB]
-Get:38 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
-Get:39 http://ftp.de.debian.org/debian/ unstable/main libthai0 s390 0.1.17-1 [46.0 kB]
-Get:40 http://ftp.de.debian.org/debian/ unstable/main libxft2 s390 2.2.0-3 [60.3 kB]
-Get:41 http://ftp.de.debian.org/debian/ unstable/main fontconfig s390 2.8.0-3.1 [336 kB]
-Get:42 http://ftp.de.debian.org/debian/ unstable/main libpango1.0-0 s390 1.29.4-2 [465 kB]
-Get:43 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 s390 8.12-4 [114 kB]
-Get:44 http://ftp.de.debian.org/debian/ unstable/main libsm6 s390 2:1.2.0-2 [30.3 kB]
-Get:45 http://ftp.de.debian.org/debian/ unstable/main libtiff4 s390 3.9.6-1 [210 kB]
-Get:46 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390 0.9.3-5 [433 kB]
-Get:47 http://ftp.de.debian.org/debian/ unstable/main libxext6 s390 2:1.3.0-3 [52.3 kB]
-Get:48 http://ftp.de.debian.org/debian/ unstable/main libxss1 s390 1:1.2.1-2 [16.8 kB]
-Get:49 http://ftp.de.debian.org/debian/ unstable/main libxt6 s390 1:1.1.1-2 [206 kB]
-Get:50 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390 9.0.1 [213 kB]
-Get:51 http://ftp.de.debian.org/debian/ unstable/main groff-base s390 1.21-6 [1156 kB]
-Get:52 http://ftp.de.debian.org/debian/ unstable/main man-db s390 2.6.1-1 [1068 kB]
-Get:53 http://ftp.de.debian.org/debian/ unstable/main file s390 5.10-1 [53.5 kB]
-Get:54 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390 0.18.1.1-5 [143 kB]
-Get:55 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.105 [78.7 kB]
-Get:56 http://ftp.de.debian.org/debian/ unstable/main html2text s390 1.3.2a-15 [101 kB]
-Get:57 http://ftp.de.debian.org/debian/ unstable/main gettext s390 0.18.1.1-5 [2073 kB]
-Get:58 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:59 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:60 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120115 [693 kB]
-Get:61 http://ftp.de.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
-Get:62 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.6 s390 4.6.3-1 [4520 kB]
-Get:63 http://ftp.de.debian.org/debian/ unstable/main gfortran s390 4:4.6.2-4 [1130 B]
-Get:64 http://ftp.de.debian.org/debian/ unstable/main libblas3gf s390 1.2.20110419-2 [191 kB]
-Get:65 http://ftp.de.debian.org/debian/ unstable/main libblas-dev s390 1.2.20110419-2 [203 kB]
-Get:66 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev s390 1.0.6-1 [35.7 kB]
-Get:67 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev s390 8d-1 [243 kB]
-Get:68 http://ftp.de.debian.org/debian/ unstable/main liblapack3gf s390 3.3.1-1 [1720 kB]
-Get:69 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev s390 3.3.1-1 [1920 kB]
-Get:70 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev s390 5.9-4 [113 kB]
-Get:71 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev s390 5.9-4 [396 kB]
-Get:72 http://ftp.de.debian.org/debian/ unstable/main libpaper1 s390 1.1.24+nmu1 [21.9 kB]
-Get:73 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils s390 1.1.24+nmu1 [18.4 kB]
-Get:74 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev s390 8.12-4 [308 kB]
-Get:75 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390 1:1.2.6.dfsg-2 [213 kB]
-Get:76 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev s390 1.2.47-1 [270 kB]
-Get:77 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev s390 6.2-8 [258 kB]
-Get:78 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev s390 6.2-8 [894 B]
-Get:79 http://ftp.de.debian.org/debian/ unstable/main zip s390 3.0-4 [347 kB]
-Get:80 http://ftp.de.debian.org/debian/ unstable/main unzip s390 6.0-5 [195 kB]
-Get:81 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
-Get:82 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 s390 8.5.11-1 [1654 kB]
-Get:83 http://ftp.de.debian.org/debian/ unstable/main tk8.5 s390 8.5.11-1 [1200 kB]
-Get:84 http://ftp.de.debian.org/debian/ unstable/main r-base-core s390 2.14.2-1 [20.1 MB]
-Get:85 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 2.14.2-1 [3894 B]
+Get:1 http://ftp.de.debian.org/debian/ unstable/main ncurses-bin s390 5.9-6 [336 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main libgomp1 s390 4.7.0-3 [33.4 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main gcc-4.7-base s390 4.7.0-3 [139 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libstdc++6 s390 4.7.0-3 [365 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libgcc1 s390 1:4.7.0-3 [31.1 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libtinfo5 s390 5.9-6 [279 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main libncurses5 s390 5.9-6 [300 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390 1.2.1-1 [40.0 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390 5.11-1 [260 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390 1:8.30-4 [247 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libexpat1 s390 2.1.0-1 [140 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 s390 2.4.9-1 [449 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 s390 2.8.0-3.1 [286 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 s390 0.24.4-1 [376 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 s390 1.2.49-1 [191 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main libxau6 s390 1:1.0.7-1 [18.6 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 s390 1:1.1.0-4 [23.8 kB]
+Get:20 http://ftp.de.debian.org/debian/ unstable/main libxcb1 s390 1.8.1-1 [53.2 kB]
+Get:21 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
+Get:22 http://ftp.de.debian.org/debian/ unstable/main libx11-6 s390 2:1.4.4-4 [892 kB]
+Get:23 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 s390 1.8.1-1 [18.9 kB]
+Get:24 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 s390 1.8.1-1 [10.2 kB]
+Get:25 http://ftp.de.debian.org/debian/ unstable/main libxrender1 s390 1:0.9.6-2 [31.2 kB]
+Get:26 http://ftp.de.debian.org/debian/ unstable/main libcairo2 s390 1.12.0-2 [901 kB]
+Get:27 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390 3.0.10-3 [25.3 kB]
+Get:28 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390 2.32.0-4 [2099 kB]
+Get:29 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390 2.7.8.dfsg-7 [882 kB]
+Get:30 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390 0.6.5-1 [150 kB]
+Get:31 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 s390 0.2.5-3 [29.7 kB]
+Get:32 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 s390 4.7.0-3 [291 kB]
+Get:33 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
+Get:34 http://ftp.de.debian.org/debian/ unstable/main libice6 s390 2:1.0.8-2 [63.6 kB]
+Get:35 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 s390 8d-1 [141 kB]
+Get:36 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
+Get:37 http://ftp.de.debian.org/debian/ unstable/main libthai0 s390 0.1.17-1 [46.0 kB]
+Get:38 http://ftp.de.debian.org/debian/ unstable/main libxft2 s390 2.2.0-3 [60.3 kB]
+Get:39 http://ftp.de.debian.org/debian/ unstable/main fontconfig s390 2.8.0-3.1 [336 kB]
+Get:40 http://ftp.de.debian.org/debian/ unstable/main libpango1.0-0 s390 1.30.0-1 [469 kB]
+Get:41 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 s390 1:8.30-4 [125 kB]
+Get:42 http://ftp.de.debian.org/debian/ unstable/main libsm6 s390 2:1.2.1-2 [35.0 kB]
+Get:43 http://ftp.de.debian.org/debian/ unstable/main libtiff4 s390 3.9.6-2 [210 kB]
+Get:44 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390 0.9.3-5 [433 kB]
+Get:45 http://ftp.de.debian.org/debian/ unstable/main libxext6 s390 2:1.3.0-3 [52.3 kB]
+Get:46 http://ftp.de.debian.org/debian/ unstable/main libxss1 s390 1:1.2.1-2 [16.8 kB]
+Get:47 http://ftp.de.debian.org/debian/ unstable/main libxt6 s390 1:1.1.1-2 [206 kB]
+Get:48 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390 9.0.1 [213 kB]
+Get:49 http://ftp.de.debian.org/debian/ unstable/main groff-base s390 1.21-7 [1145 kB]
+Get:50 http://ftp.de.debian.org/debian/ unstable/main man-db s390 2.6.1-2 [1068 kB]
+Get:51 http://ftp.de.debian.org/debian/ unstable/main g++-4.6 s390 4.6.3-3 [5891 kB]
+Get:52 http://ftp.de.debian.org/debian/ unstable/main libstdc++6-4.6-dev s390 4.6.3-3 [1676 kB]
+Get:53 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6 s390 4.6.3-3 [4176 kB]
+Get:54 http://ftp.de.debian.org/debian/ unstable/main cpp-4.6 s390 4.6.3-3 [3856 kB]
+Get:55 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6-base s390 4.6.3-3 [139 kB]
+Get:56 http://ftp.de.debian.org/debian/ unstable/main file s390 5.11-1 [53.7 kB]
+Get:57 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390 0.18.1.1-5 [143 kB]
+Get:58 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.109 [79.4 kB]
+Get:59 http://ftp.de.debian.org/debian/ unstable/main cpp s390 4:4.6.3-4 [16.3 kB]
+Get:60 http://ftp.de.debian.org/debian/ unstable/main html2text s390 1.3.2a-15 [101 kB]
+Get:61 http://ftp.de.debian.org/debian/ unstable/main gettext s390 0.18.1.1-5 [2073 kB]
+Get:62 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:63 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:64 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120410 [694 kB]
+Get:65 http://ftp.de.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
+Get:66 http://ftp.de.debian.org/debian/ unstable/main gcc s390 4:4.6.3-4 [5016 B]
+Get:67 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.6 s390 4.6.3-3 [4521 kB]
+Get:68 http://ftp.de.debian.org/debian/ unstable/main gfortran s390 4:4.6.3-4 [1126 B]
+Get:69 http://ftp.de.debian.org/debian/ unstable/main libblas3gf s390 1.2.20110419-2 [191 kB]
+Get:70 http://ftp.de.debian.org/debian/ unstable/main libblas-dev s390 1.2.20110419-2 [203 kB]
+Get:71 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev s390 1.0.6-1 [35.7 kB]
+Get:72 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev s390 8d-1 [243 kB]
+Get:73 http://ftp.de.debian.org/debian/ unstable/main liblapack3gf s390 3.3.1-1 [1720 kB]
+Get:74 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev s390 3.3.1-1 [1920 kB]
+Get:75 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev s390 5.9-6 [113 kB]
+Get:76 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev s390 5.9-6 [398 kB]
+Get:77 http://ftp.de.debian.org/debian/ unstable/main libpaper1 s390 1.1.24+nmu1 [21.9 kB]
+Get:78 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils s390 1.1.24+nmu1 [18.4 kB]
+Get:79 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev s390 1:8.30-4 [351 kB]
+Get:80 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390 1:1.2.6.dfsg-2 [213 kB]
+Get:81 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev s390 1.2.49-1 [269 kB]
+Get:82 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev s390 6.2-8 [258 kB]
+Get:83 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev s390 6.2-8 [894 B]
+Get:84 http://ftp.de.debian.org/debian/ unstable/main zip s390 3.0-4 [347 kB]
+Get:85 http://ftp.de.debian.org/debian/ unstable/main unzip s390 6.0-6 [195 kB]
+Get:86 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:87 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 s390 8.5.11-1 [1654 kB]
+Get:88 http://ftp.de.debian.org/debian/ unstable/main tk8.5 s390 8.5.11-1 [1200 kB]
+Get:89 http://ftp.de.debian.org/debian/ unstable/main r-base-core s390 2.15.0-1 [20.4 MB]
+Get:90 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 2.15.0-1 [3900 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 68.0 MB in 24s (2753 kB/s)
-(Reading database ... 10605 files and directories currently installed.)
-Preparing to replace libgomp1 4.6.2-12 (using .../libgomp1_4.6.3-1_s390.deb) ...
-Unpacking replacement libgomp1 ...
-Preparing to replace gcc-4.6-base 4.6.2-12 (using .../gcc-4.6-base_4.6.3-1_s390.deb) ...
-Unpacking replacement gcc-4.6-base ...
-Setting up gcc-4.6-base (4.6.3-1) ...
-(Reading database ... 10606 files and directories currently installed.)
-Preparing to replace libgcc1 1:4.6.2-12 (using .../libgcc1_1%3a4.6.3-1_s390.deb) ...
-Unpacking replacement libgcc1 ...
-Setting up libgcc1 (1:4.6.3-1) ...
-(Reading database ... 10606 files and directories currently installed.)
-Preparing to replace cpp-4.6 4.6.2-12 (using .../cpp-4.6_4.6.3-1_s390.deb) ...
-Unpacking replacement cpp-4.6 ...
-Preparing to replace libstdc++6-4.6-dev 4.6.2-12 (using .../libstdc++6-4.6-dev_4.6.3-1_s390.deb) ...
-Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.2-12 (using .../g++-4.6_4.6.3-1_s390.deb) ...
-Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.2-12 (using .../gcc-4.6_4.6.3-1_s390.deb) ...
-Unpacking replacement gcc-4.6 ...
-Preparing to replace libstdc++6 4.6.2-12 (using .../libstdc++6_4.6.3-1_s390.deb) ...
-Unpacking replacement libstdc++6 ...
-Setting up libstdc++6 (4.6.3-1) ...
-(Reading database ... 10606 files and directories currently installed.)
-Preparing to replace zlib1g 1:1.2.3.4.dfsg-3 (using .../zlib1g_1%3a1.2.6.dfsg-2_s390.deb) ...
-Unpacking replacement zlib1g ...
-Setting up zlib1g (1:1.2.6.dfsg-2) ...
-Selecting previously unselected package libpipeline1.
-(Reading database ... 10606 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_s390.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_s390.deb) ...
-Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-4_s390.deb) ...
-Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_s390.deb) ...
-Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_s390.deb) ...
+Fetched 69.6 MB in 8s (8313 kB/s)
+(Reading database ... 10731 files and directories currently installed.)
+Preparing to replace ncurses-bin 5.9-5 (using .../ncurses-bin_5.9-6_s390.deb) ...
+Unpacking replacement ncurses-bin ...
+Setting up ncurses-bin (5.9-6) ...
+(Reading database ... 10731 files and directories currently installed.)
+Preparing to replace libgomp1:s390 4.7.0-1 (using .../libgomp1_4.7.0-3_s390.deb) ...
+Unpacking replacement libgomp1:s390 ...
+Preparing to replace gcc-4.7-base:s390 4.7.0-1 (using .../gcc-4.7-base_4.7.0-3_s390.deb) ...
+Unpacking replacement gcc-4.7-base:s390 ...
+Setting up gcc-4.7-base:s390 (4.7.0-3) ...
+(Reading database ... 10731 files and directories currently installed.)
+Preparing to replace libstdc++6:s390 4.7.0-1 (using .../libstdc++6_4.7.0-3_s390.deb) ...
+Unpacking replacement libstdc++6:s390 ...
+Setting up libstdc++6:s390 (4.7.0-3) ...
+(Reading database ... 10731 files and directories currently installed.)
+Preparing to replace libgcc1:s390 1:4.7.0-1 (using .../libgcc1_1%3a4.7.0-3_s390.deb) ...
+Unpacking replacement libgcc1:s390 ...
+Setting up libgcc1:s390 (1:4.7.0-3) ...
+(Reading database ... 10731 files and directories currently installed.)
+Preparing to replace libtinfo5:s390 5.9-5 (using .../libtinfo5_5.9-6_s390.deb) ...
+Unpacking replacement libtinfo5:s390 ...
+Setting up libtinfo5:s390 (5.9-6) ...
+(Reading database ... 10731 files and directories currently installed.)
+Preparing to replace libncurses5:s390 5.9-5 (using .../libncurses5_5.9-6_s390.deb) ...
+Unpacking replacement libncurses5:s390 ...
+Setting up libncurses5:s390 (5.9-6) ...
+Selecting previously unselected package libpipeline1:s390.
+(Reading database ... 10731 files and directories currently installed.)
+Unpacking libpipeline1:s390 (from .../libpipeline1_1.2.1-1_s390.deb) ...
+Selecting previously unselected package libmagic1:s390.
+Unpacking libmagic1:s390 (from .../libmagic1_5.11-1_s390.deb) ...
+Selecting previously unselected package libpcre3:s390.
+Unpacking libpcre3:s390 (from .../libpcre3_1%3a8.30-4_s390.deb) ...
+Selecting previously unselected package libexpat1:s390.
+Unpacking libexpat1:s390 (from .../libexpat1_2.1.0-1_s390.deb) ...
+Selecting previously unselected package libfreetype6:s390.
+Unpacking libfreetype6:s390 (from .../libfreetype6_2.4.9-1_s390.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3.1_all.deb) ...
-Selecting previously unselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_s390.deb) ...
-Selecting previously unselected package libpixman-1-0.
-Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_s390.deb) ...
-Selecting previously unselected package libpng12-0.
-Unpacking libpng12-0 (from .../libpng12-0_1.2.47-1_s390.deb) ...
-Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_s390.deb) ...
-Selecting previously unselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_s390.deb) ...
-Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_s390.deb) ...
+Selecting previously unselected package libfontconfig1:s390.
+Unpacking libfontconfig1:s390 (from .../libfontconfig1_2.8.0-3.1_s390.deb) ...
+Selecting previously unselected package libpixman-1-0:s390.
+Unpacking libpixman-1-0:s390 (from .../libpixman-1-0_0.24.4-1_s390.deb) ...
+Selecting previously unselected package libpng12-0:s390.
+Unpacking libpng12-0:s390 (from .../libpng12-0_1.2.49-1_s390.deb) ...
+Selecting previously unselected package libxau6:s390.
+Unpacking libxau6:s390 (from .../libxau6_1%3a1.0.7-1_s390.deb) ...
+Selecting previously unselected package libxdmcp6:s390.
+Unpacking libxdmcp6:s390 (from .../libxdmcp6_1%3a1.1.0-4_s390.deb) ...
+Selecting previously unselected package libxcb1:s390.
+Unpacking libxcb1:s390 (from .../libxcb1_1.8.1-1_s390.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
-Selecting previously unselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_s390.deb) ...
-Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_s390.deb) ...
-Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_s390.deb) ...
-Selecting previously unselected package libxrender1.
-Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_s390.deb) ...
-Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_s390.deb) ...
-Selecting previously unselected package libffi5.
-Unpacking libffi5 (from .../libffi5_3.0.10-3_s390.deb) ...
-Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_s390.deb) ...
+Selecting previously unselected package libx11-6:s390.
+Unpacking libx11-6:s390 (from .../libx11-6_2%3a1.4.4-4_s390.deb) ...
+Selecting previously unselected package libxcb-render0:s390.
+Unpacking libxcb-render0:s390 (from .../libxcb-render0_1.8.1-1_s390.deb) ...
+Selecting previously unselected package libxcb-shm0:s390.
+Unpacking libxcb-shm0:s390 (from .../libxcb-shm0_1.8.1-1_s390.deb) ...
+Selecting previously unselected package libxrender1:s390.
+Unpacking libxrender1:s390 (from .../libxrender1_1%3a0.9.6-2_s390.deb) ...
+Selecting previously unselected package libcairo2:s390.
+Unpacking libcairo2:s390 (from .../libcairo2_1.12.0-2_s390.deb) ...
+Selecting previously unselected package libffi5:s390.
+Unpacking libffi5:s390 (from .../libffi5_3.0.10-3_s390.deb) ...
+Selecting previously unselected package libglib2.0-0:s390.
+Unpacking libglib2.0-0:s390 (from .../libglib2.0-0_2.32.0-4_s390.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_s390.deb) ...
-Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_s390.deb) ...
-Selecting previously unselected package libdatrie1.
-Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_s390.deb) ...
-Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_s390.deb) ...
+Selecting previously unselected package libcroco3:s390.
+Unpacking libcroco3:s390 (from .../libcroco3_0.6.5-1_s390.deb) ...
+Selecting previously unselected package libdatrie1:s390.
+Unpacking libdatrie1:s390 (from .../libdatrie1_0.2.5-3_s390.deb) ...
+Selecting previously unselected package libgfortran3:s390.
+Unpacking libgfortran3:s390 (from .../libgfortran3_4.7.0-3_s390.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
-Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_s390.deb) ...
-Selecting previously unselected package libjpeg8.
-Unpacking libjpeg8 (from .../libjpeg8_8d-1_s390.deb) ...
+Selecting previously unselected package libice6:s390.
+Unpacking libice6:s390 (from .../libice6_2%3a1.0.8-2_s390.deb) ...
+Selecting previously unselected package libjpeg8:s390.
+Unpacking libjpeg8:s390 (from .../libjpeg8_8d-1_s390.deb) ...
Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.17-1_all.deb) ...
-Selecting previously unselected package libthai0.
-Unpacking libthai0 (from .../libthai0_0.1.17-1_s390.deb) ...
-Selecting previously unselected package libxft2.
-Unpacking libxft2 (from .../libxft2_2.2.0-3_s390.deb) ...
+Selecting previously unselected package libthai0:s390.
+Unpacking libthai0:s390 (from .../libthai0_0.1.17-1_s390.deb) ...
+Selecting previously unselected package libxft2:s390.
+Unpacking libxft2:s390 (from .../libxft2_2.2.0-3_s390.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_s390.deb) ...
-Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_s390.deb) ...
-Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_s390.deb) ...
-Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_s390.deb) ...
-Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_s390.deb) ...
-Selecting previously unselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-5_s390.deb) ...
-Selecting previously unselected package libxext6.
-Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3_s390.deb) ...
-Selecting previously unselected package libxss1.
-Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_s390.deb) ...
-Selecting previously unselected package libxt6.
-Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_s390.deb) ...
+Selecting previously unselected package libpango1.0-0:s390.
+Unpacking libpango1.0-0:s390 (from .../libpango1.0-0_1.30.0-1_s390.deb) ...
+Selecting previously unselected package libpcrecpp0:s390.
+Unpacking libpcrecpp0:s390 (from .../libpcrecpp0_1%3a8.30-4_s390.deb) ...
+Selecting previously unselected package libsm6:s390.
+Unpacking libsm6:s390 (from .../libsm6_2%3a1.2.1-2_s390.deb) ...
+Selecting previously unselected package libtiff4:s390.
+Unpacking libtiff4:s390 (from .../libtiff4_3.9.6-2_s390.deb) ...
+Selecting previously unselected package libunistring0:s390.
+Unpacking libunistring0:s390 (from .../libunistring0_0.9.3-5_s390.deb) ...
+Selecting previously unselected package libxext6:s390.
+Unpacking libxext6:s390 (from .../libxext6_2%3a1.3.0-3_s390.deb) ...
+Selecting previously unselected package libxss1:s390.
+Unpacking libxss1:s390 (from .../libxss1_1%3a1.2.1-2_s390.deb) ...
+Selecting previously unselected package libxt6:s390.
+Unpacking libxt6:s390 (from .../libxt6_1%3a1.1.1-2_s390.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_s390.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6_s390.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-7_s390.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_s390.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_s390.deb) ...
+Preparing to replace g++-4.6 4.6.3-1 (using .../g++-4.6_4.6.3-3_s390.deb) ...
+Unpacking replacement g++-4.6 ...
+Preparing to replace libstdc++6-4.6-dev 4.6.3-1 (using .../libstdc++6-4.6-dev_4.6.3-3_s390.deb) ...
+Unpacking replacement libstdc++6-4.6-dev ...
+Preparing to replace gcc-4.6 4.6.3-1 (using .../gcc-4.6_4.6.3-3_s390.deb) ...
+Unpacking replacement gcc-4.6 ...
+Preparing to replace cpp-4.6 4.6.3-1 (using .../cpp-4.6_4.6.3-3_s390.deb) ...
+Unpacking replacement cpp-4.6 ...
+Preparing to replace gcc-4.6-base:s390 4.6.3-1 (using .../gcc-4.6-base_4.6.3-3_s390.deb) ...
+Unpacking replacement gcc-4.6-base:s390 ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.10-1_s390.deb) ...
+Unpacking file (from .../archives/file_5.11-1_s390.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_s390.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
+Preparing to replace cpp 4:4.6.3-3 (using .../cpp_4%3a4.6.3-4_s390.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_s390.deb) ...
Selecting previously unselected package gettext.
@@ -428,47 +448,50 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
+Preparing to replace gcc 4:4.6.3-3 (using .../gcc_4%3a4.6.3-4_s390.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_s390.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-3_s390.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_s390.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_s390.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_s390.deb) ...
Selecting previously unselected package libblas-dev.
Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-2_s390.deb) ...
-Selecting previously unselected package libbz2-dev.
-Unpacking libbz2-dev (from .../libbz2-dev_1.0.6-1_s390.deb) ...
-Selecting previously unselected package libjpeg8-dev.
-Unpacking libjpeg8-dev (from .../libjpeg8-dev_8d-1_s390.deb) ...
+Selecting previously unselected package libbz2-dev:s390.
+Unpacking libbz2-dev:s390 (from .../libbz2-dev_1.0.6-1_s390.deb) ...
+Selecting previously unselected package libjpeg8-dev:s390.
+Unpacking libjpeg8-dev:s390 (from .../libjpeg8-dev_8d-1_s390.deb) ...
Selecting previously unselected package liblapack3gf.
Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_s390.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_s390.deb) ...
-Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_s390.deb) ...
+Selecting previously unselected package libtinfo-dev:s390.
+Unpacking libtinfo-dev:s390 (from .../libtinfo-dev_5.9-6_s390.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_s390.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_s390.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_s390.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_s390.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_s390.deb) ...
-Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_s390.deb) ...
+Selecting previously unselected package zlib1g-dev:s390.
+Unpacking zlib1g-dev:s390 (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_s390.deb) ...
-Selecting previously unselected package libreadline6-dev.
-Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_s390.deb) ...
-Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_s390.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_s390.deb) ...
+Selecting previously unselected package libreadline6-dev:s390.
+Unpacking libreadline6-dev:s390 (from .../libreadline6-dev_6.2-8_s390.deb) ...
+Selecting previously unselected package libreadline-dev:s390.
+Unpacking libreadline-dev:s390 (from .../libreadline-dev_6.2-8_s390.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../archives/zip_3.0-4_s390.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../archives/unzip_6.0-5_s390.deb) ...
+Unpacking unzip (from .../archives/unzip_6.0-6_s390.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -476,119 +499,122 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_s390.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_s390.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_s390.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_s390.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libgomp1 (4.6.3-1) ...
-Setting up cpp-4.6 (4.6.3-1) ...
-Setting up gcc-4.6 (4.6.3-1) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libpcre3 (8.12-4) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
+Setting up libgomp1:s390 (4.7.0-3) ...
+Setting up libpipeline1:s390 (1.2.1-1) ...
+Setting up libmagic1:s390 (5.11-1) ...
+Setting up libpcre3:s390 (1:8.30-4) ...
+Setting up libexpat1:s390 (2.1.0-1) ...
+Setting up libfreetype6:s390 (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libpng12-0 (1.2.47-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
-Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libfontconfig1:s390 (2.8.0-3.1) ...
+Setting up libpixman-1-0:s390 (0.24.4-1) ...
+Setting up libpng12-0:s390 (1.2.49-1) ...
+Setting up libxau6:s390 (1:1.0.7-1) ...
+Setting up libxdmcp6:s390 (1:1.1.0-4) ...
+Setting up libxcb1:s390 (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libx11-6:s390 (2:1.4.4-4) ...
+Setting up libxcb-render0:s390 (1.8.1-1) ...
+Setting up libxcb-shm0:s390 (1.8.1-1) ...
+Setting up libxrender1:s390 (1:0.9.6-2) ...
+Setting up libcairo2:s390 (1.12.0-2) ...
+Setting up libffi5:s390 (3.0.10-3) ...
+Setting up libglib2.0-0:s390 (2.32.0-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libcroco3:s390 (0.6.5-1) ...
+Setting up libdatrie1:s390 (0.2.5-3) ...
+Setting up libgfortran3:s390 (4.7.0-3) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
-Setting up libjpeg8 (8d-1) ...
+Setting up libice6:s390 (2:1.0.8-2) ...
+Setting up libjpeg8:s390 (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3) ...
+Setting up libthai0:s390 (0.1.17-1) ...
+Setting up libxft2:s390 (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5) ...
-Setting up libxext6 (2:1.3.0-3) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2) ...
+Setting up libpango1.0-0:s390 (1.30.0-1) ...
+Setting up libpcrecpp0:s390 (1:8.30-4) ...
+Setting up libsm6:s390 (2:1.2.1-2) ...
+Setting up libtiff4:s390 (3.9.6-2) ...
+Setting up libunistring0:s390 (0.9.3-5) ...
+Setting up libxext6:s390 (2:1.3.0-3) ...
+Setting up libxss1:s390 (1:1.2.1-2) ...
+Setting up libxt6:s390 (1:1.1.1-2) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.1-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up gcc-4.6-base:s390 (4.6.3-3) ...
+Setting up cpp-4.6 (4.6.3-3) ...
+Setting up gcc-4.6 (4.6.3-3) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
+Setting up cpp (4:4.6.3-4) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gcc (4:4.6.3-4) ...
+Setting up gfortran-4.6 (4.6.3-3) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
Setting up libblas-dev (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
+Setting up libbz2-dev:s390 (1.0.6-1) ...
+Setting up libjpeg8-dev:s390 (8d-1) ...
Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev:s390 (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8) ...
-Setting up libreadline-dev (6.2-8) ...
+Setting up libpcre3-dev (1:8.30-4) ...
+Setting up zlib1g-dev:s390 (1:1.2.6.dfsg-2) ...
+Setting up libpng12-dev (1.2.49-1) ...
+Setting up libreadline6-dev:s390 (6.2-8) ...
+Setting up libreadline-dev:s390 (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
-Setting up libstdc++6-4.6-dev (4.6.3-1) ...
-Setting up g++-4.6 (4.6.3-1) ...
+Setting up r-base-dev (2.15.0-1) ...
+Setting up g++-4.6 (4.6.3-3) ...
+Setting up libstdc++6-4.6-dev (4.6.3-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 36 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 12 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-s390x s390 (s390x)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-25 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.1-2
-Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42-1 e2fsprogs_1.42-1 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.4-base_4.4.6-14 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-2 hostname_3.10 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-25 libc-dev-bin_2.13-25 libc6_2.13-25 libc6-dev_2.13-25 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42-1 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.3+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libncurses5-dev_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.0-4.1 libsepol1_2.1.0-1.2 libslang2_2.2.4-5 libsm6_2:1.2.0-2 libss2_1.42-1 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libuuid1_2.20.1-1.2 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.1-2 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-25 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-7 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-1.2 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.13-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.3-3 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.4-base_4.4.7-1 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-3 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.12.0-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10 libgfortran3_4.7.0-3 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 libice6_2:1.0.8-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncurses5-dev_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libsm6_2:1.2.1-2 libss2_1.42.2-1 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-5 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -599,12 +625,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -614,8 +640,8 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture s390
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -623,9 +649,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -654,25 +680,25 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build
+ debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -686,44 +712,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -762,7 +788,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -787,27 +813,27 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_s390.deb'.
- dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../r-bioc-limma_3.10.3-1_s390.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_s390.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_s390.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0448
+Build finished at 20120412-0332
-r-bioc-limma_3.10.3-1_s390.changes:
+r-bioc-limma_3.12.0~dfsg-1_s390.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: s390
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
@@ -815,44 +841,39 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 3e15b2e22237ae1fc42989d734c75949d56574b5 1476292 r-bioc-limma_3.10.3-1_s390.deb
+ ed78bce333ecfef0b3bc851e6f6cda4e6454c0b6 811302 r-bioc-limma_3.12.0~dfsg-1_s390.deb
Checksums-Sha256:
- 72dab88e436d43a17e32532b091156ad387594e487300de676fa5dc9160f086d 1476292 r-bioc-limma_3.10.3-1_s390.deb
+ 9a68b65c141b45d0f7ded2d1ea94cc5844471c8996eac8eac084de8130f1e5ce 811302 r-bioc-limma_3.12.0~dfsg-1_s390.deb
Files:
- 89061625a8765a1e697433c055a92f12 1476292 gnu-r optional r-bioc-limma_3.10.3-1_s390.deb
+ 1aed29a08a42e20b909b8fa0f1335731 811302 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_s390.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_s390.deb
-──────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_s390.deb
+───────────────────────────────────
new debian package, version 2.0.
- size 1476292 bytes: control archive= 1569 bytes.
- 770 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 811302 bytes: control archive= 1538 bytes.
+ 774 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: s390
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1679
- Depends: libc6 (>= 2.1.3), r-base-core (>= 2.14.2-1)
+ Installed-Size: 983
+ Depends: libc6 (>= 2.1.3), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -864,52 +885,51 @@ r-bioc-limma_3.10.3-1_s390.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 9458 2012-03-07 04:48 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 383 2012-03-07 04:48 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 198254 2012-03-07 04:48 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 3774 2012-03-07 04:48 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2012-03-07 04:48 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 34556 2012-03-07 04:48 ./usr/lib/R/site-library/limma/html/00Index.html
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 8492 2012-03-07 04:48 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1350 2012-03-07 04:48 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 458765 2012-03-07 04:48 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3268 2012-03-07 04:48 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 2392 2012-03-07 04:48 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 6221 2012-03-07 04:48 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 1901 2012-03-07 04:48 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 1711 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rwxr-xr-x root/root 673 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 737677 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 42743 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rwxr-xr-x root/root 89361 2012-03-07 04:48 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 965 2012-03-07 04:48 ./usr/lib/R/site-library/limma/DESCRIPTION
--rw-r--r-- root/root 2173 2012-03-07 04:48 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 518 2012-03-07 04:48 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 216 2012-03-07 04:48 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 5603 2012-03-07 04:48 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 2886 2012-03-07 04:48 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 1052 2012-03-07 04:48 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6022 2012-03-07 04:48 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rwxr-xr-x root/root 1230 2012-03-07 04:48 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 04:48 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2012-03-07 04:48 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 560 2012-03-07 04:48 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 2302 2012-03-07 04:48 ./usr/share/doc/r-bioc-limma/copyright
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 9754 2012-04-12 03:32 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 383 2012-04-12 03:32 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 202046 2012-04-12 03:32 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 3828 2012-04-12 03:32 ./usr/lib/R/site-library/limma/R/limma.rdx
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2012-04-12 03:32 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 35015 2012-04-12 03:32 ./usr/lib/R/site-library/limma/html/00Index.html
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 8492 2012-04-12 03:32 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1374 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 473044 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3350 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 2431 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 6317 2012-04-12 03:32 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 1901 2012-04-12 03:32 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 1711 2012-04-12 03:32 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rwxr-xr-x root/root 673 2012-04-12 03:32 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 42743 2012-04-12 03:32 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 91993 2012-04-12 03:32 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 965 2012-04-12 03:32 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 3989 2012-04-12 03:32 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 521 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 220 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 5727 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 2943 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 1051 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 6157 2012-04-12 03:32 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rwxr-xr-x root/root 1230 2012-04-12 03:32 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 03:32 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 264 2012-04-12 03:32 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 27996 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 683 2012-04-12 03:32 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 2457 2012-04-12 03:32 ./usr/share/doc/r-bioc-limma/copyright
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -923,7 +943,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390-sbuild-904fa078-6f5a-4ef9-b02c-dd2ca198ee59/build/buildd-r-bioc-limma_3.10.3-1-s390-9B6x2C
+Purging /var/lib/schroot/mount/sid-s390-sbuild-45d5e6e6-1279-495c-a624-0af01f7d8ade/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390-5azzDZ
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -931,22 +951,22 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: s390
-Build-Space: 5340
+Build-Space: 3276
Build-Time: 14
Distribution: sid
-Install-Time: 43
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 29
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 107
-Source-Version: 3.10.3-1
-Space: 5340
+Package-Time: 76
+Source-Version: 3.12.0~dfsg-1
+Space: 3276
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0448
-Build needed 00:01:47, 5340k disc space
+Finished at 20120412-0332
+Build needed 00:01:16, 3276k disc space
Signature with key 'E7C67939' requested:
-From buildd at zandonai.debian.org Wed Mar 07 04:50:52 2012
+From buildd at zandonai.debian.org Thu Apr 12 03:34:22 2012
Return-path: <buildd at zandonai.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
@@ -954,66 +974,67 @@ Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1S58pw-0004hi-Bq
- for logs at buildd.debian.org; Wed, 07 Mar 2012 04:50:52 +0000
+ id 1SIAne-0007Eo-LL
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 03:34:22 +0000
Received: from zandonai.debian.org ([80.245.147.46])
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EMAIL=hostmaster at zandonai.debian.org (verified)
by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1S58pv-0007hu-Gb; Wed, 07 Mar 2012 04:50:51 +0000
+ id 1SIAnd-0003Sl-C1; Thu, 12 Apr 2012 03:34:21 +0000
Received: from buildd by zandonai.debian.org with local (Exim 4.72)
(envelope-from <buildd at zandonai.debian.org>)
- id 1S58pv-0001Jf-0W; Wed, 07 Mar 2012 04:50:51 +0000
-Message-Id: <E1S58pv-0001Jf-0W at zandonai.debian.org>
+ id 1SIAnc-0008Os-HO; Thu, 12 Apr 2012 03:34:20 +0000
+Message-Id: <E1SIAnc-0008Os-HO at zandonai.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 7 Mar 2012 04:50:50 +0000
+Date: Thu, 12 Apr 2012 03:34:20 +0000
From: buildd on zandonai <buildd at zandonai.debian.org>
To: aurelien at aurel32.net,phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on s390x (dist=sid)
-Key-Id: 96C8554F
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on s390x
+ (dist=sid)
+Key-Id: BE1C5586
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (s390x) 07 Mar 2012 04:49 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (s390x) 12 Apr 2012 03:33 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: s390x
-Get:1 http://ftp.de.debian.org unstable InRelease [197 kB]
-Get:2 http://incoming.debian.org unstable InRelease [197 kB]
-Get:3 http://ftp.de.debian.org unstable/main Sources [6225 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [208 kB]
+Get:2 http://incoming.debian.org unstable InRelease [208 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [6216 kB]
+Get:4 http://ftp.de.debian.org unstable/contrib Sources [54.5 kB]
+Get:5 http://ftp.de.debian.org unstable/non-free Sources [97.8 kB]
+Get:6 http://ftp.de.debian.org unstable/main s390x Packages [5689 kB]
Ign http://incoming.debian.org InRelease
-Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [6231 kB]
-Get:6 http://ftp.de.debian.org unstable/contrib Sources [55.0 kB]
-Get:7 http://ftp.de.debian.org unstable/non-free Sources [98.5 kB]
-Get:8 http://ftp.de.debian.org unstable/main s390x Packages [5316 kB]
-Get:9 http://ftp.de.debian.org unstable/contrib s390x Packages [35.0 kB]
+Get:7 http://ftp.de.debian.org unstable/contrib s390x Packages [36.3 kB]
+Get:8 http://incoming.debian.org Release.gpg [836 B]
Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
-Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2154 B]
-Get:11 http://ftp.de.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:12 http://ftp.de.debian.org unstable/main Translation-en [3906 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [55.0 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [98.8 kB]
-Get:15 http://incoming.debian.org unstable/main s390x Packages [5322 kB]
-Get:16 http://incoming.debian.org unstable/contrib s390x Packages [35.0 kB]
+Get:9 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
+Get:10 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:11 http://ftp.de.debian.org unstable/main Translation-en [3936 kB]
+Get:12 http://incoming.debian.org unstable/main Sources [6221 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [54.5 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.7 kB]
+Get:15 http://incoming.debian.org unstable/main s390x Packages [5706 kB]
+Get:16 http://incoming.debian.org unstable/contrib s390x Packages [36.3 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:17 http://incoming.debian.org unstable/main TranslationIndex [2154 B]
-Get:18 http://incoming.debian.org Release [1616 B]
-Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:20 http://incoming.debian.org unstable/main Translation-en [3906 kB]
-Get:21 http://incoming.debian.org Sources [64.3 kB]
-Get:22 http://incoming.debian.org Packages [853 kB]
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3936 kB]
+Get:21 http://incoming.debian.org Sources [42.9 kB]
+Get:22 http://incoming.debian.org Packages [682 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 32.7 MB in 33s (969 kB/s)
+Fetched 33.3 MB in 12s (2752 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1034,11 +1055,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 2s (329 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 0s (307 kB/s)
Download complete and in download only mode
Check arch
@@ -1058,12 +1079,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 27 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 27 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1073,46 +1094,52 @@ Checking correctness of dependencies...
Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
Checking for already installed dependencies...
libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+gcc: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1+b1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
- libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
- libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
- po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common
- xdg-utils zip zlib1g-dev
+ bsdmainutils cpp cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
+ gcc gcc-4.6 gcc-4.6-base gcc-4.7-base gettext gettext-base gfortran
+ gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf
+ libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1
+ libfreetype6 libgcc1 libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5
+ libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev
+ libthai-data libthai0 libtiff4 libtinfo-dev libtinfo5 libunistring0 libx11-6
+ libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
+ libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
+ r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip
+ zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make curl defoma gettext-doc
- gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc
- libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
- ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
- libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
- texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
- texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
- texlive-latex-extra texinfo texi2html tclreadline gvfs-bin
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ curl defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib
+ manpages-dev autoconf automake1.9 libtool flex bison gdb gcc-doc
+ gcc-4.6-multilib libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg
+ libquadmath-dbg libmudflap0-dbg gettext-doc gfortran-multilib gfortran-doc
+ gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
+ ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
+ ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
+ texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
+ texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info libgpm2
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext
@@ -1127,180 +1154,235 @@ The following NEW packages will be installed:
libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip
x11-common xdg-utils zip zlib1g-dev
-0 upgraded, 76 newly installed, 0 to remove and 10 not upgraded.
-Need to get 57.4 MB of archives.
+The following packages will be upgraded:
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base gcc-4.7-base libgcc1 libgomp1
+ libncurses5 libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin
+14 upgraded, 76 newly installed, 0 to remove and 13 not upgraded.
+Need to get 75.2 MB of archives.
After this operation, 127 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.1-1 [40.5 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 5.10-1 [255 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 8.12-4+b1 [235 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main libexpat1 s390x 2.0.1-7.2 [141 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 s390x 2.4.8-1 [456 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 s390x 2.8.0-3.1 [285 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 s390x 0.24.4-1 [348 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 s390x 1.2.47-1 [193 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main libxau6 s390x 1:1.0.6-4 [17.0 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 s390x 1:1.1.0-4 [23.5 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main libxcb1 s390x 1.8-2 [52.6 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main libx11-6 s390x 2:1.4.4-4 [907 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 s390x 1.8-2 [19.0 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 s390x 1.8-2 [10.2 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main libxrender1 s390x 1:0.9.6-2 [32.9 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main libcairo2 s390x 1.10.2-7 [978 kB]
-Get:20 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3+b1 [26.2 kB]
-Get:21 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.30.2-6 [1867 kB]
-Get:22 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-7 [894 kB]
-Get:23 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390x 0.6.4-2 [150 kB]
-Get:24 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 s390x 0.2.5-3 [29.7 kB]
-Get:25 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 s390x 4.6.3-1 [350 kB]
-Get:26 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
-Get:27 http://ftp.de.debian.org/debian/ unstable/main libice6 s390x 2:1.0.7-2+b1 [59.2 kB]
-Get:28 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 s390x 8d-1 [190 kB]
-Get:29 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
-Get:30 http://ftp.de.debian.org/debian/ unstable/main libthai0 s390x 0.1.17-1 [46.6 kB]
-Get:31 http://ftp.de.debian.org/debian/ unstable/main libxft2 s390x 2.2.0-3 [61.0 kB]
-Get:32 http://ftp.de.debian.org/debian/ unstable/main fontconfig s390x 2.8.0-3.1 [337 kB]
-Get:33 http://ftp.de.debian.org/debian/ unstable/main libpango1.0-0 s390x 1.29.4-2 [468 kB]
-Get:34 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 s390x 8.12-4+b1 [114 kB]
-Get:35 http://ftp.de.debian.org/debian/ unstable/main libsm6 s390x 2:1.2.0-2 [30.3 kB]
-Get:36 http://ftp.de.debian.org/debian/ unstable/main libtiff4 s390x 3.9.6-1 [211 kB]
-Get:37 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
-Get:38 http://ftp.de.debian.org/debian/ unstable/main libxext6 s390x 2:1.3.0-3 [53.8 kB]
-Get:39 http://ftp.de.debian.org/debian/ unstable/main libxss1 s390x 1:1.2.1-2 [16.9 kB]
-Get:40 http://ftp.de.debian.org/debian/ unstable/main libxt6 s390x 1:1.1.1-2 [213 kB]
-Get:41 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.1 [214 kB]
-Get:42 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.21-6+b1 [1184 kB]
-Get:43 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.1-1 [1070 kB]
-Get:44 http://ftp.de.debian.org/debian/ unstable/main file s390x 5.10-1 [53.6 kB]
-Get:45 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-5+b1 [157 kB]
-Get:46 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.105 [78.7 kB]
-Get:47 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
-Get:48 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-5+b1 [2163 kB]
-Get:49 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:50 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:51 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120115 [693 kB]
-Get:52 http://ftp.de.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
-Get:53 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.6 s390x 4.6.3-1 [4788 kB]
-Get:54 http://ftp.de.debian.org/debian/ unstable/main gfortran s390x 4:4.6.2-4 [1132 B]
-Get:55 http://ftp.de.debian.org/debian/ unstable/main libblas3gf s390x 1.2.20110419-2 [221 kB]
-Get:56 http://ftp.de.debian.org/debian/ unstable/main libblas-dev s390x 1.2.20110419-2 [230 kB]
-Get:57 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev s390x 1.0.6-1 [38.8 kB]
-Get:58 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev s390x 8d-1 [297 kB]
-Get:59 http://ftp.de.debian.org/debian/ unstable/main liblapack3gf s390x 3.3.1-1 [4037 kB]
-Get:60 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev s390x 3.3.1-1 [4296 kB]
-Get:61 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev s390x 5.9-4+b1 [121 kB]
-Get:62 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev s390x 5.9-4+b1 [413 kB]
-Get:63 http://ftp.de.debian.org/debian/ unstable/main libpaper1 s390x 1.1.24+nmu1 [21.9 kB]
-Get:64 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils s390x 1.1.24+nmu1 [18.3 kB]
-Get:65 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev s390x 8.12-4+b1 [318 kB]
-Get:66 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.6.dfsg-2 [217 kB]
-Get:67 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev s390x 1.2.47-1 [273 kB]
-Get:68 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev s390x 6.2-8+b1 [272 kB]
-Get:69 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev s390x 6.2-8+b1 [898 B]
-Get:70 http://ftp.de.debian.org/debian/ unstable/main zip s390x 3.0-4 [349 kB]
-Get:71 http://ftp.de.debian.org/debian/ unstable/main unzip s390x 6.0-5 [202 kB]
-Get:72 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
-Get:73 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 s390x 8.5.11-1 [1652 kB]
-Get:74 http://ftp.de.debian.org/debian/ unstable/main tk8.5 s390x 8.5.11-1 [1224 kB]
-Get:75 http://ftp.de.debian.org/debian/ unstable/main r-base-core s390x 2.14.2-1 [20.2 MB]
-Get:76 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 2.14.2-1 [3894 B]
+Get:1 http://ftp.de.debian.org/debian/ unstable/main ncurses-bin s390x 5.9-6 [336 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main libgomp1 s390x 4.7.0-3 [29.8 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main gcc-4.7-base s390x 4.7.0-3 [139 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libstdc++6 s390x 4.7.0-3 [379 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libgcc1 s390x 1:4.7.0-3 [31.0 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libtinfo5 s390x 5.9-6 [280 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main libncurses5 s390x 5.9-6 [304 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.1-1 [40.5 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 5.11-1 [256 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 1:8.30-4 [253 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libexpat1 s390x 2.1.0-1 [144 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 s390x 2.4.9-1 [465 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 s390x 2.8.0-3.1 [285 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 s390x 0.24.4-1 [348 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 s390x 1.2.49-1 [193 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main libxau6 s390x 1:1.0.7-1 [18.6 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 s390x 1:1.1.0-4 [23.5 kB]
+Get:20 http://ftp.de.debian.org/debian/ unstable/main libxcb1 s390x 1.8.1-1 [52.7 kB]
+Get:21 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
+Get:22 http://ftp.de.debian.org/debian/ unstable/main libx11-6 s390x 2:1.4.4-4 [907 kB]
+Get:23 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 s390x 1.8.1-1 [19.0 kB]
+Get:24 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 s390x 1.8.1-1 [10.2 kB]
+Get:25 http://ftp.de.debian.org/debian/ unstable/main libxrender1 s390x 1:0.9.6-2 [32.9 kB]
+Get:26 http://ftp.de.debian.org/debian/ unstable/main libcairo2 s390x 1.12.0-2 [895 kB]
+Get:27 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3+b1 [26.2 kB]
+Get:28 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.32.0-4 [2084 kB]
+Get:29 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-7 [894 kB]
+Get:30 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390x 0.6.5-1 [151 kB]
+Get:31 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 s390x 0.2.5-3 [29.7 kB]
+Get:32 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 s390x 4.7.0-3 [358 kB]
+Get:33 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
+Get:34 http://ftp.de.debian.org/debian/ unstable/main libice6 s390x 2:1.0.8-2 [65.6 kB]
+Get:35 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 s390x 8d-1 [190 kB]
+Get:36 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
+Get:37 http://ftp.de.debian.org/debian/ unstable/main libthai0 s390x 0.1.17-1 [46.6 kB]
+Get:38 http://ftp.de.debian.org/debian/ unstable/main libxft2 s390x 2.2.0-3 [61.0 kB]
+Get:39 http://ftp.de.debian.org/debian/ unstable/main fontconfig s390x 2.8.0-3.1 [337 kB]
+Get:40 http://ftp.de.debian.org/debian/ unstable/main libpango1.0-0 s390x 1.30.0-1 [473 kB]
+Get:41 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 s390x 1:8.30-4 [126 kB]
+Get:42 http://ftp.de.debian.org/debian/ unstable/main libsm6 s390x 2:1.2.1-2 [34.9 kB]
+Get:43 http://ftp.de.debian.org/debian/ unstable/main libtiff4 s390x 3.9.6-2 [211 kB]
+Get:44 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
+Get:45 http://ftp.de.debian.org/debian/ unstable/main libxext6 s390x 2:1.3.0-3 [53.8 kB]
+Get:46 http://ftp.de.debian.org/debian/ unstable/main libxss1 s390x 1:1.2.1-2 [16.9 kB]
+Get:47 http://ftp.de.debian.org/debian/ unstable/main libxt6 s390x 1:1.1.1-2 [213 kB]
+Get:48 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.1 [214 kB]
+Get:49 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.21-7 [1187 kB]
+Get:50 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.1-2 [1070 kB]
+Get:51 http://ftp.de.debian.org/debian/ unstable/main g++-4.6 s390x 4.6.3-3 [5558 kB]
+Get:52 http://ftp.de.debian.org/debian/ unstable/main libstdc++6-4.6-dev s390x 4.6.3-3 [1719 kB]
+Get:53 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6 s390x 4.6.3-3 [4358 kB]
+Get:54 http://ftp.de.debian.org/debian/ unstable/main cpp-4.6 s390x 4.6.3-3 [4048 kB]
+Get:55 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6-base s390x 4.6.3-3 [140 kB]
+Get:56 http://ftp.de.debian.org/debian/ unstable/main file s390x 5.11-1 [53.9 kB]
+Get:57 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-5+b1 [157 kB]
+Get:58 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.109 [79.4 kB]
+Get:59 http://ftp.de.debian.org/debian/ unstable/main cpp s390x 4:4.6.3-4 [16.3 kB]
+Get:60 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
+Get:61 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-5+b1 [2163 kB]
+Get:62 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:63 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:64 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120410 [694 kB]
+Get:65 http://ftp.de.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
+Get:66 http://ftp.de.debian.org/debian/ unstable/main gcc s390x 4:4.6.3-4 [5038 B]
+Get:67 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.6 s390x 4.6.3-3 [4789 kB]
+Get:68 http://ftp.de.debian.org/debian/ unstable/main gfortran s390x 4:4.6.3-4 [1132 B]
+Get:69 http://ftp.de.debian.org/debian/ unstable/main libblas3gf s390x 1.2.20110419-2 [221 kB]
+Get:70 http://ftp.de.debian.org/debian/ unstable/main libblas-dev s390x 1.2.20110419-2 [230 kB]
+Get:71 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev s390x 1.0.6-1 [38.8 kB]
+Get:72 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev s390x 8d-1 [297 kB]
+Get:73 http://ftp.de.debian.org/debian/ unstable/main liblapack3gf s390x 3.3.1-1 [4037 kB]
+Get:74 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev s390x 3.3.1-1 [4296 kB]
+Get:75 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev s390x 5.9-6 [121 kB]
+Get:76 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev s390x 5.9-6 [414 kB]
+Get:77 http://ftp.de.debian.org/debian/ unstable/main libpaper1 s390x 1.1.24+nmu1 [21.9 kB]
+Get:78 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils s390x 1.1.24+nmu1 [18.3 kB]
+Get:79 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev s390x 1:8.30-4 [359 kB]
+Get:80 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.6.dfsg-2 [217 kB]
+Get:81 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev s390x 1.2.49-1 [273 kB]
+Get:82 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev s390x 6.2-8+b1 [272 kB]
+Get:83 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev s390x 6.2-8+b1 [898 B]
+Get:84 http://ftp.de.debian.org/debian/ unstable/main zip s390x 3.0-4 [349 kB]
+Get:85 http://ftp.de.debian.org/debian/ unstable/main unzip s390x 6.0-6 [203 kB]
+Get:86 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:87 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 s390x 8.5.11-1 [1652 kB]
+Get:88 http://ftp.de.debian.org/debian/ unstable/main tk8.5 s390x 8.5.11-1 [1224 kB]
+Get:89 http://ftp.de.debian.org/debian/ unstable/main r-base-core s390x 2.15.0-1 [20.5 MB]
+Get:90 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 2.15.0-1 [3900 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 57.4 MB in 25s (2259 kB/s)
-Selecting previously unselected package libpipeline1.
-(Reading database ... 10784 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_s390x.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_s390x.deb) ...
-Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-4+b1_s390x.deb) ...
-Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_s390x.deb) ...
-Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_s390x.deb) ...
+Fetched 75.2 MB in 7s (10.4 MB/s)
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace ncurses-bin 5.9-5 (using .../ncurses-bin_5.9-6_s390x.deb) ...
+Unpacking replacement ncurses-bin ...
+Setting up ncurses-bin (5.9-6) ...
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace libgomp1:s390x 4.7.0-1 (using .../libgomp1_4.7.0-3_s390x.deb) ...
+Unpacking replacement libgomp1:s390x ...
+Preparing to replace gcc-4.7-base:s390x 4.7.0-1 (using .../gcc-4.7-base_4.7.0-3_s390x.deb) ...
+Unpacking replacement gcc-4.7-base:s390x ...
+Setting up gcc-4.7-base:s390x (4.7.0-3) ...
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace libstdc++6:s390x 4.7.0-1 (using .../libstdc++6_4.7.0-3_s390x.deb) ...
+Unpacking replacement libstdc++6:s390x ...
+Setting up libstdc++6:s390x (4.7.0-3) ...
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace libgcc1:s390x 1:4.7.0-1 (using .../libgcc1_1%3a4.7.0-3_s390x.deb) ...
+Unpacking replacement libgcc1:s390x ...
+Setting up libgcc1:s390x (1:4.7.0-3) ...
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace libtinfo5:s390x 5.9-5 (using .../libtinfo5_5.9-6_s390x.deb) ...
+Unpacking replacement libtinfo5:s390x ...
+Setting up libtinfo5:s390x (5.9-6) ...
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace libncurses5:s390x 5.9-5 (using .../libncurses5_5.9-6_s390x.deb) ...
+Unpacking replacement libncurses5:s390x ...
+Setting up libncurses5:s390x (5.9-6) ...
+Selecting previously unselected package libpipeline1:s390x.
+(Reading database ... 10853 files and directories currently installed.)
+Unpacking libpipeline1:s390x (from .../libpipeline1_1.2.1-1_s390x.deb) ...
+Selecting previously unselected package libmagic1:s390x.
+Unpacking libmagic1:s390x (from .../libmagic1_5.11-1_s390x.deb) ...
+Selecting previously unselected package libpcre3:s390x.
+Unpacking libpcre3:s390x (from .../libpcre3_1%3a8.30-4_s390x.deb) ...
+Selecting previously unselected package libexpat1:s390x.
+Unpacking libexpat1:s390x (from .../libexpat1_2.1.0-1_s390x.deb) ...
+Selecting previously unselected package libfreetype6:s390x.
+Unpacking libfreetype6:s390x (from .../libfreetype6_2.4.9-1_s390x.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3.1_all.deb) ...
-Selecting previously unselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_s390x.deb) ...
-Selecting previously unselected package libpixman-1-0.
-Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_s390x.deb) ...
-Selecting previously unselected package libpng12-0.
-Unpacking libpng12-0 (from .../libpng12-0_1.2.47-1_s390x.deb) ...
-Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_s390x.deb) ...
-Selecting previously unselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_s390x.deb) ...
-Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_s390x.deb) ...
+Selecting previously unselected package libfontconfig1:s390x.
+Unpacking libfontconfig1:s390x (from .../libfontconfig1_2.8.0-3.1_s390x.deb) ...
+Selecting previously unselected package libpixman-1-0:s390x.
+Unpacking libpixman-1-0:s390x (from .../libpixman-1-0_0.24.4-1_s390x.deb) ...
+Selecting previously unselected package libpng12-0:s390x.
+Unpacking libpng12-0:s390x (from .../libpng12-0_1.2.49-1_s390x.deb) ...
+Selecting previously unselected package libxau6:s390x.
+Unpacking libxau6:s390x (from .../libxau6_1%3a1.0.7-1_s390x.deb) ...
+Selecting previously unselected package libxdmcp6:s390x.
+Unpacking libxdmcp6:s390x (from .../libxdmcp6_1%3a1.1.0-4_s390x.deb) ...
+Selecting previously unselected package libxcb1:s390x.
+Unpacking libxcb1:s390x (from .../libxcb1_1.8.1-1_s390x.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
-Selecting previously unselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_s390x.deb) ...
-Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_s390x.deb) ...
-Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_s390x.deb) ...
-Selecting previously unselected package libxrender1.
-Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_s390x.deb) ...
-Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_s390x.deb) ...
-Selecting previously unselected package libffi5.
-Unpacking libffi5 (from .../libffi5_3.0.10-3+b1_s390x.deb) ...
-Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_s390x.deb) ...
+Selecting previously unselected package libx11-6:s390x.
+Unpacking libx11-6:s390x (from .../libx11-6_2%3a1.4.4-4_s390x.deb) ...
+Selecting previously unselected package libxcb-render0:s390x.
+Unpacking libxcb-render0:s390x (from .../libxcb-render0_1.8.1-1_s390x.deb) ...
+Selecting previously unselected package libxcb-shm0:s390x.
+Unpacking libxcb-shm0:s390x (from .../libxcb-shm0_1.8.1-1_s390x.deb) ...
+Selecting previously unselected package libxrender1:s390x.
+Unpacking libxrender1:s390x (from .../libxrender1_1%3a0.9.6-2_s390x.deb) ...
+Selecting previously unselected package libcairo2:s390x.
+Unpacking libcairo2:s390x (from .../libcairo2_1.12.0-2_s390x.deb) ...
+Selecting previously unselected package libffi5:s390x.
+Unpacking libffi5:s390x (from .../libffi5_3.0.10-3+b1_s390x.deb) ...
+Selecting previously unselected package libglib2.0-0:s390x.
+Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.32.0-4_s390x.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_s390x.deb) ...
-Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_s390x.deb) ...
-Selecting previously unselected package libdatrie1.
-Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_s390x.deb) ...
-Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_s390x.deb) ...
+Selecting previously unselected package libcroco3:s390x.
+Unpacking libcroco3:s390x (from .../libcroco3_0.6.5-1_s390x.deb) ...
+Selecting previously unselected package libdatrie1:s390x.
+Unpacking libdatrie1:s390x (from .../libdatrie1_0.2.5-3_s390x.deb) ...
+Selecting previously unselected package libgfortran3:s390x.
+Unpacking libgfortran3:s390x (from .../libgfortran3_4.7.0-3_s390x.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
-Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2+b1_s390x.deb) ...
-Selecting previously unselected package libjpeg8.
-Unpacking libjpeg8 (from .../libjpeg8_8d-1_s390x.deb) ...
+Selecting previously unselected package libice6:s390x.
+Unpacking libice6:s390x (from .../libice6_2%3a1.0.8-2_s390x.deb) ...
+Selecting previously unselected package libjpeg8:s390x.
+Unpacking libjpeg8:s390x (from .../libjpeg8_8d-1_s390x.deb) ...
Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.17-1_all.deb) ...
-Selecting previously unselected package libthai0.
-Unpacking libthai0 (from .../libthai0_0.1.17-1_s390x.deb) ...
-Selecting previously unselected package libxft2.
-Unpacking libxft2 (from .../libxft2_2.2.0-3_s390x.deb) ...
+Selecting previously unselected package libthai0:s390x.
+Unpacking libthai0:s390x (from .../libthai0_0.1.17-1_s390x.deb) ...
+Selecting previously unselected package libxft2:s390x.
+Unpacking libxft2:s390x (from .../libxft2_2.2.0-3_s390x.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_s390x.deb) ...
-Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_s390x.deb) ...
-Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4+b1_s390x.deb) ...
-Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_s390x.deb) ...
-Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_s390x.deb) ...
-Selecting previously unselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
-Selecting previously unselected package libxext6.
-Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3_s390x.deb) ...
-Selecting previously unselected package libxss1.
-Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_s390x.deb) ...
-Selecting previously unselected package libxt6.
-Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_s390x.deb) ...
+Selecting previously unselected package libpango1.0-0:s390x.
+Unpacking libpango1.0-0:s390x (from .../libpango1.0-0_1.30.0-1_s390x.deb) ...
+Selecting previously unselected package libpcrecpp0:s390x.
+Unpacking libpcrecpp0:s390x (from .../libpcrecpp0_1%3a8.30-4_s390x.deb) ...
+Selecting previously unselected package libsm6:s390x.
+Unpacking libsm6:s390x (from .../libsm6_2%3a1.2.1-2_s390x.deb) ...
+Selecting previously unselected package libtiff4:s390x.
+Unpacking libtiff4:s390x (from .../libtiff4_3.9.6-2_s390x.deb) ...
+Selecting previously unselected package libunistring0:s390x.
+Unpacking libunistring0:s390x (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
+Selecting previously unselected package libxext6:s390x.
+Unpacking libxext6:s390x (from .../libxext6_2%3a1.3.0-3_s390x.deb) ...
+Selecting previously unselected package libxss1:s390x.
+Unpacking libxss1:s390x (from .../libxss1_1%3a1.2.1-2_s390x.deb) ...
+Selecting previously unselected package libxt6:s390x.
+Unpacking libxt6:s390x (from .../libxt6_1%3a1.1.1-2_s390x.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_s390x.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6+b1_s390x.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-7_s390x.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_s390x.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_s390x.deb) ...
+Preparing to replace g++-4.6 4.6.3-1 (using .../g++-4.6_4.6.3-3_s390x.deb) ...
+Unpacking replacement g++-4.6 ...
+Preparing to replace libstdc++6-4.6-dev 4.6.3-1 (using .../libstdc++6-4.6-dev_4.6.3-3_s390x.deb) ...
+Unpacking replacement libstdc++6-4.6-dev ...
+Preparing to replace gcc-4.6 4.6.3-1 (using .../gcc-4.6_4.6.3-3_s390x.deb) ...
+Unpacking replacement gcc-4.6 ...
+Preparing to replace cpp-4.6 4.6.3-1 (using .../cpp-4.6_4.6.3-3_s390x.deb) ...
+Unpacking replacement cpp-4.6 ...
+Preparing to replace gcc-4.6-base:s390x 4.6.3-1 (using .../gcc-4.6-base_4.6.3-3_s390x.deb) ...
+Unpacking replacement gcc-4.6-base:s390x ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.10-1_s390x.deb) ...
+Unpacking file (from .../archives/file_5.11-1_s390x.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5+b1_s390x.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
+Preparing to replace cpp 4:4.6.3-3 (using .../cpp_4%3a4.6.3-4_s390x.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15+b1_s390x.deb) ...
Selecting previously unselected package gettext.
@@ -1310,47 +1392,50 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
+Preparing to replace gcc 4:4.6.3-3 (using .../gcc_4%3a4.6.3-4_s390x.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_s390x.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-3_s390x.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_s390x.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_s390x.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_s390x.deb) ...
Selecting previously unselected package libblas-dev.
Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-2_s390x.deb) ...
-Selecting previously unselected package libbz2-dev.
-Unpacking libbz2-dev (from .../libbz2-dev_1.0.6-1_s390x.deb) ...
-Selecting previously unselected package libjpeg8-dev.
-Unpacking libjpeg8-dev (from .../libjpeg8-dev_8d-1_s390x.deb) ...
+Selecting previously unselected package libbz2-dev:s390x.
+Unpacking libbz2-dev:s390x (from .../libbz2-dev_1.0.6-1_s390x.deb) ...
+Selecting previously unselected package libjpeg8-dev:s390x.
+Unpacking libjpeg8-dev:s390x (from .../libjpeg8-dev_8d-1_s390x.deb) ...
Selecting previously unselected package liblapack3gf.
Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_s390x.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_s390x.deb) ...
-Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4+b1_s390x.deb) ...
+Selecting previously unselected package libtinfo-dev:s390x.
+Unpacking libtinfo-dev:s390x (from .../libtinfo-dev_5.9-6_s390x.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4+b1_s390x.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_s390x.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_s390x.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_s390x.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4+b1_s390x.deb) ...
-Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390x.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_s390x.deb) ...
+Selecting previously unselected package zlib1g-dev:s390x.
+Unpacking zlib1g-dev:s390x (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390x.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_s390x.deb) ...
-Selecting previously unselected package libreadline6-dev.
-Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8+b1_s390x.deb) ...
-Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8+b1_s390x.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_s390x.deb) ...
+Selecting previously unselected package libreadline6-dev:s390x.
+Unpacking libreadline6-dev:s390x (from .../libreadline6-dev_6.2-8+b1_s390x.deb) ...
+Selecting previously unselected package libreadline-dev:s390x.
+Unpacking libreadline-dev:s390x (from .../libreadline-dev_6.2-8+b1_s390x.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../archives/zip_3.0-4_s390x.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../archives/unzip_6.0-5_s390x.deb) ...
+Unpacking unzip (from .../archives/unzip_6.0-6_s390x.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -1358,114 +1443,122 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_s390x.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_s390x.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_s390x.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_s390x.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libpcre3 (8.12-4+b1) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
+Setting up libgomp1:s390x (4.7.0-3) ...
+Setting up libpipeline1:s390x (1.2.1-1) ...
+Setting up libmagic1:s390x (5.11-1) ...
+Setting up libpcre3:s390x (1:8.30-4) ...
+Setting up libexpat1:s390x (2.1.0-1) ...
+Setting up libfreetype6:s390x (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libpng12-0 (1.2.47-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
-Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libfontconfig1:s390x (2.8.0-3.1) ...
+Setting up libpixman-1-0:s390x (0.24.4-1) ...
+Setting up libpng12-0:s390x (1.2.49-1) ...
+Setting up libxau6:s390x (1:1.0.7-1) ...
+Setting up libxdmcp6:s390x (1:1.1.0-4) ...
+Setting up libxcb1:s390x (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3+b1) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libx11-6:s390x (2:1.4.4-4) ...
+Setting up libxcb-render0:s390x (1.8.1-1) ...
+Setting up libxcb-shm0:s390x (1.8.1-1) ...
+Setting up libxrender1:s390x (1:0.9.6-2) ...
+Setting up libcairo2:s390x (1.12.0-2) ...
+Setting up libffi5:s390x (3.0.10-3+b1) ...
+Setting up libglib2.0-0:s390x (2.32.0-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libcroco3:s390x (0.6.5-1) ...
+Setting up libdatrie1:s390x (0.2.5-3) ...
+Setting up libgfortran3:s390x (4.7.0-3) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2+b1) ...
-Setting up libjpeg8 (8d-1) ...
+Setting up libice6:s390x (2:1.0.8-2) ...
+Setting up libjpeg8:s390x (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3) ...
+Setting up libthai0:s390x (0.1.17-1) ...
+Setting up libxft2:s390x (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4+b1) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5+b1) ...
-Setting up libxext6 (2:1.3.0-3) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2) ...
+Setting up libpango1.0-0:s390x (1.30.0-1) ...
+Setting up libpcrecpp0:s390x (1:8.30-4) ...
+Setting up libsm6:s390x (2:1.2.1-2) ...
+Setting up libtiff4:s390x (3.9.6-2) ...
+Setting up libunistring0:s390x (0.9.3-5+b1) ...
+Setting up libxext6:s390x (2:1.3.0-3) ...
+Setting up libxss1:s390x (1:1.2.1-2) ...
+Setting up libxt6:s390x (1:1.1.1-2) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6+b1) ...
-Setting up man-db (2.6.1-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up gcc-4.6-base:s390x (4.6.3-3) ...
+Setting up cpp-4.6 (4.6.3-3) ...
+Setting up gcc-4.6 (4.6.3-3) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5+b1) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
+Setting up cpp (4:4.6.3-4) ...
Setting up html2text (1.3.2a-15+b1) ...
Setting up gettext (0.18.1.1-5+b1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gcc (4:4.6.3-4) ...
+Setting up gfortran-4.6 (4.6.3-3) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
Setting up libblas-dev (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
+Setting up libbz2-dev:s390x (1.0.6-1) ...
+Setting up libjpeg8-dev:s390x (8d-1) ...
Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4+b1) ...
-Setting up libncurses5-dev (5.9-4+b1) ...
+Setting up libtinfo-dev:s390x (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4+b1) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8+b1) ...
-Setting up libreadline-dev (6.2-8+b1) ...
+Setting up libpcre3-dev (1:8.30-4) ...
+Setting up zlib1g-dev:s390x (1:1.2.6.dfsg-2) ...
+Setting up libpng12-dev (1.2.49-1) ...
+Setting up libreadline6-dev:s390x (6.2-8+b1) ...
+Setting up libreadline-dev:s390x (6.2-8+b1) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.0-1) ...
+Setting up g++-4.6 (4.6.3-3) ...
+Setting up libstdc++6-4.6-dev (4.6.3-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 13 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-s390x s390x (s390x)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.7-1
-Package versions: apt_0.8.15.9+b1 base-files_6.5+b1 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3+b1 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.41 debconf-i18n_1.5.41 debfoster_2.7-1.1+b1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1+b1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-3 gpgv_1.4.12-3 grep_2.10-1 groff-base_1.21-6+b1 gzip_1.4-2+b1 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3+b1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10+b1 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2+b1 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblocale-gettext-perl_1.05-7+b2 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.10-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-3+b1 libncurses5_5.9-4+b1 libncurses5-dev_5.9-4+b1 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4+b1 libpcre3-dev_8.12-4+b1 libpcrecpp0_8.12-4+b1 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libreadline-dev_6.2-8+b1 libreadline6_6.2-8+b1 libreadline6-dev_6.2-8+b1 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-1 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42.1-2 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4+b1 libtinfo5_5.9-4+b1 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.7-1 login_1:4.1.5-1 lsb-base_3.2+Debian29 make_3.81-8.1+b1 man-db_2.6.1-1 mawk_1.3.3-16+b1 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-4+b1 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3+b1 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.13-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1+b1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.3-3 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-3 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.12.0-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10+b1 libgfortran3_4.7.0-3 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 libice6_2:1.0.8-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblocale-gettext-perl_1.05-7+b2 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncurses5-dev_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libreadline-dev_6.2-8+b1 libreadline6_6.2-8+b1 libreadline6-dev_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libsm6_2:1.2.1-2 libss2_1.42.2-1 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1+b1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3+b1 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -1476,12 +1569,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -1491,8 +1584,8 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture s390x
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -1500,9 +1593,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -1531,25 +1624,25 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build
+ debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -1563,44 +1656,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -1639,7 +1732,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -1664,27 +1757,27 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_s390x.deb'.
- dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../r-bioc-limma_3.10.3-1_s390x.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_s390x.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_s390x.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0450
+Build finished at 20120412-0334
-r-bioc-limma_3.10.3-1_s390x.changes:
+r-bioc-limma_3.12.0~dfsg-1_s390x.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: s390x
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
@@ -1692,44 +1785,39 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 97a42e3c7baf0601db9e4d4dc25c87ddf292e967 1477070 r-bioc-limma_3.10.3-1_s390x.deb
+ 587b528418fc8e4e3840891e7934552c524a95c2 809774 r-bioc-limma_3.12.0~dfsg-1_s390x.deb
Checksums-Sha256:
- c1bbe80fecc80d0d7eeb8f38fb75a8e2cad2e421c7312a06ed79cdbee7a884f0 1477070 r-bioc-limma_3.10.3-1_s390x.deb
+ f7d1fac1135b8627276fbd2f8a988c7f26c6b0b8c464854fd5bce9b856d734c9 809774 r-bioc-limma_3.12.0~dfsg-1_s390x.deb
Files:
- 1fd83a4a2cbff3f839d90b87e897b5fc 1477070 gnu-r optional r-bioc-limma_3.10.3-1_s390x.deb
+ b931a98b35a4f4a330435e9c6fccd852 809774 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_s390x.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_s390x.deb
-───────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_s390x.deb
+────────────────────────────────────
new debian package, version 2.0.
- size 1477070 bytes: control archive= 1573 bytes.
- 770 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 809774 bytes: control archive= 1538 bytes.
+ 774 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: s390x
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1681
- Depends: libc6 (>= 2.13), r-base-core (>= 2.14.2-1)
+ Installed-Size: 985
+ Depends: libc6 (>= 2.13), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -1741,52 +1829,51 @@ r-bioc-limma_3.10.3-1_s390x.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 9458 2012-03-07 04:50 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 383 2012-03-07 04:50 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 198253 2012-03-07 04:50 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 3773 2012-03-07 04:50 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2012-03-07 04:50 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 34556 2012-03-07 04:50 ./usr/lib/R/site-library/limma/html/00Index.html
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10632 2012-03-07 04:50 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1352 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 458658 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3284 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 2392 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 6221 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 1901 2012-03-07 04:50 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 1711 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rwxr-xr-x root/root 673 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 737677 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 42743 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rwxr-xr-x root/root 89361 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 966 2012-03-07 04:50 ./usr/lib/R/site-library/limma/DESCRIPTION
--rw-r--r-- root/root 2173 2012-03-07 04:50 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 518 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 216 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 5603 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 2886 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 1052 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6022 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rwxr-xr-x root/root 1230 2012-03-07 04:50 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2012-03-07 04:50 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 560 2012-03-07 04:50 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 2302 2012-03-07 04:50 ./usr/share/doc/r-bioc-limma/copyright
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 9754 2012-04-12 03:34 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 383 2012-04-12 03:34 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 202046 2012-04-12 03:34 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 3828 2012-04-12 03:34 ./usr/lib/R/site-library/limma/R/limma.rdx
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2012-04-12 03:34 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 35015 2012-04-12 03:34 ./usr/lib/R/site-library/limma/html/00Index.html
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 10632 2012-04-12 03:34 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1367 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 472900 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3345 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 2431 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 6317 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 1901 2012-04-12 03:34 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 1711 2012-04-12 03:34 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rwxr-xr-x root/root 673 2012-04-12 03:34 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 42743 2012-04-12 03:34 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 91993 2012-04-12 03:34 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 966 2012-04-12 03:34 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 3989 2012-04-12 03:34 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 521 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 220 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 5727 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 2943 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 1050 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 6157 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rwxr-xr-x root/root 1230 2012-04-12 03:34 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 264 2012-04-12 03:34 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 27996 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 683 2012-04-12 03:34 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 2457 2012-04-12 03:34 ./usr/share/doc/r-bioc-limma/copyright
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1800,7 +1887,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390x-sbuild-09f2bd23-781e-476e-9561-8510bdfcacac/sid-s390x-sbuild/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm
+Purging /var/lib/schroot/mount/sid-s390x-sbuild-05dddfa4-21bf-4e7f-a8c3-6f6286a6040f/sid-s390x-sbuild/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1808,18 +1895,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: s390x
-Build-Space: 5336
-Build-Time: 16
+Build-Space: 3272
+Build-Time: 15
Distribution: sid
-Install-Time: 42
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 28
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 107
-Source-Version: 3.10.3-1
-Space: 5336
+Package-Time: 76
+Source-Version: 3.12.0~dfsg-1
+Space: 3272
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0450
-Build needed 00:01:47, 5336k disc space
-Signature with key '96C8554F' requested:
+Finished at 20120412-0334
+Build needed 00:01:16, 3272k disc space
+Signature with key 'BE1C5586' requested:
diff --git a/s390x.log b/s390x.log
index a5dc055..c9ad264 100644
--- a/s390x.log
+++ b/s390x.log
@@ -1,4 +1,4 @@
-From buildd at zandonai.debian.org Wed Mar 07 04:50:52 2012
+From buildd at zandonai.debian.org Thu Apr 12 03:34:22 2012
Return-path: <buildd at zandonai.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
@@ -6,66 +6,67 @@ Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1S58pw-0004hi-Bq
- for logs at buildd.debian.org; Wed, 07 Mar 2012 04:50:52 +0000
+ id 1SIAne-0007Eo-LL
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 03:34:22 +0000
Received: from zandonai.debian.org ([80.245.147.46])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=zandonai.debian.org,
EMAIL=hostmaster at zandonai.debian.org (verified)
by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1S58pv-0007hu-Gb; Wed, 07 Mar 2012 04:50:51 +0000
+ id 1SIAnd-0003Sl-C1; Thu, 12 Apr 2012 03:34:21 +0000
Received: from buildd by zandonai.debian.org with local (Exim 4.72)
(envelope-from <buildd at zandonai.debian.org>)
- id 1S58pv-0001Jf-0W; Wed, 07 Mar 2012 04:50:51 +0000
-Message-Id: <E1S58pv-0001Jf-0W at zandonai.debian.org>
+ id 1SIAnc-0008Os-HO; Thu, 12 Apr 2012 03:34:20 +0000
+Message-Id: <E1SIAnc-0008Os-HO at zandonai.debian.org>
MIME-Version: 1.0
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-Date: Wed, 7 Mar 2012 04:50:50 +0000
+Date: Thu, 12 Apr 2012 03:34:20 +0000
From: buildd on zandonai <buildd at zandonai.debian.org>
To: aurelien at aurel32.net,phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on s390x (dist=sid)
-Key-Id: 96C8554F
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on s390x
+ (dist=sid)
+Key-Id: BE1C5586
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (s390x) 07 Mar 2012 04:49 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (s390x) 12 Apr 2012 03:33 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: s390x
-Get:1 http://ftp.de.debian.org unstable InRelease [197 kB]
-Get:2 http://incoming.debian.org unstable InRelease [197 kB]
-Get:3 http://ftp.de.debian.org unstable/main Sources [6225 kB]
+Get:1 http://ftp.de.debian.org unstable InRelease [208 kB]
+Get:2 http://incoming.debian.org unstable InRelease [208 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [6216 kB]
+Get:4 http://ftp.de.debian.org unstable/contrib Sources [54.5 kB]
+Get:5 http://ftp.de.debian.org unstable/non-free Sources [97.8 kB]
+Get:6 http://ftp.de.debian.org unstable/main s390x Packages [5689 kB]
Ign http://incoming.debian.org InRelease
-Get:4 http://incoming.debian.org Release.gpg [836 B]
-Get:5 http://incoming.debian.org unstable/main Sources [6231 kB]
-Get:6 http://ftp.de.debian.org unstable/contrib Sources [55.0 kB]
-Get:7 http://ftp.de.debian.org unstable/non-free Sources [98.5 kB]
-Get:8 http://ftp.de.debian.org unstable/main s390x Packages [5316 kB]
-Get:9 http://ftp.de.debian.org unstable/contrib s390x Packages [35.0 kB]
+Get:7 http://ftp.de.debian.org unstable/contrib s390x Packages [36.3 kB]
+Get:8 http://incoming.debian.org Release.gpg [836 B]
Ign http://ftp.de.debian.org unstable/contrib TranslationIndex
-Get:10 http://ftp.de.debian.org unstable/main TranslationIndex [2154 B]
-Get:11 http://ftp.de.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:12 http://ftp.de.debian.org unstable/main Translation-en [3906 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [55.0 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [98.8 kB]
-Get:15 http://incoming.debian.org unstable/main s390x Packages [5322 kB]
-Get:16 http://incoming.debian.org unstable/contrib s390x Packages [35.0 kB]
+Get:9 http://ftp.de.debian.org unstable/main TranslationIndex [2223 B]
+Get:10 http://ftp.de.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:11 http://ftp.de.debian.org unstable/main Translation-en [3936 kB]
+Get:12 http://incoming.debian.org unstable/main Sources [6221 kB]
+Get:13 http://incoming.debian.org unstable/contrib Sources [54.5 kB]
+Get:14 http://incoming.debian.org unstable/non-free Sources [97.7 kB]
+Get:15 http://incoming.debian.org unstable/main s390x Packages [5706 kB]
+Get:16 http://incoming.debian.org unstable/contrib s390x Packages [36.3 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:17 http://incoming.debian.org unstable/main TranslationIndex [2154 B]
-Get:18 http://incoming.debian.org Release [1616 B]
-Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:20 http://incoming.debian.org unstable/main Translation-en [3906 kB]
-Get:21 http://incoming.debian.org Sources [64.3 kB]
-Get:22 http://incoming.debian.org Packages [853 kB]
+Get:17 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:18 http://incoming.debian.org Release [1601 B]
+Get:19 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:20 http://incoming.debian.org unstable/main Translation-en [3936 kB]
+Get:21 http://incoming.debian.org Sources [42.9 kB]
+Get:22 http://incoming.debian.org Packages [682 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 32.7 MB in 33s (969 kB/s)
+Fetched 33.3 MB in 12s (2752 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -86,11 +87,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 2s (329 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 0s (307 kB/s)
Download complete and in download only mode
Check arch
@@ -110,12 +111,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 27 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 27 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -125,46 +126,52 @@ Checking correctness of dependencies...
Build-Depends: libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
Checking for already installed dependencies...
libc6-dev: already installed (2.13-27)
-gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+gcc: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-3 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1+b1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
- libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
- libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
- po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common
- xdg-utils zip zlib1g-dev
+ bsdmainutils cpp cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
+ gcc gcc-4.6 gcc-4.6-base gcc-4.7-base gettext gettext-base gfortran
+ gfortran-4.6 groff-base html2text intltool-debian libblas-dev libblas3gf
+ libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1
+ libfreetype6 libgcc1 libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5
+ libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev
+ libthai-data libthai0 libtiff4 libtinfo-dev libtinfo5 libunistring0 libx11-6
+ libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
+ libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
+ r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip
+ zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make curl defoma gettext-doc
- gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc
- libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
- ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
- libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
- texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
- texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
- texlive-latex-extra texinfo texi2html tclreadline gvfs-bin
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ curl defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib
+ manpages-dev autoconf automake1.9 libtool flex bison gdb gcc-doc
+ gcc-4.6-multilib libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg
+ libquadmath-dbg libmudflap0-dbg gettext-doc gfortran-multilib gfortran-doc
+ gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
+ ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
+ ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
+ texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
+ texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info libgpm2
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext
@@ -179,180 +186,235 @@ The following NEW packages will be installed:
libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip
x11-common xdg-utils zip zlib1g-dev
-0 upgraded, 76 newly installed, 0 to remove and 10 not upgraded.
-Need to get 57.4 MB of archives.
+The following packages will be upgraded:
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base gcc-4.7-base libgcc1 libgomp1
+ libncurses5 libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin
+14 upgraded, 76 newly installed, 0 to remove and 13 not upgraded.
+Need to get 75.2 MB of archives.
After this operation, 127 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.1-1 [40.5 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 5.10-1 [255 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 8.12-4+b1 [235 kB]
-Get:4 http://ftp.de.debian.org/debian/ unstable/main libexpat1 s390x 2.0.1-7.2 [141 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 s390x 2.4.8-1 [456 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 s390x 2.8.0-3.1 [285 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 s390x 0.24.4-1 [348 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 s390x 1.2.47-1 [193 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main libxau6 s390x 1:1.0.6-4 [17.0 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 s390x 1:1.1.0-4 [23.5 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main libxcb1 s390x 1.8-2 [52.6 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main libx11-6 s390x 2:1.4.4-4 [907 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 s390x 1.8-2 [19.0 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 s390x 1.8-2 [10.2 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main libxrender1 s390x 1:0.9.6-2 [32.9 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main libcairo2 s390x 1.10.2-7 [978 kB]
-Get:20 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3+b1 [26.2 kB]
-Get:21 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.30.2-6 [1867 kB]
-Get:22 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-7 [894 kB]
-Get:23 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390x 0.6.4-2 [150 kB]
-Get:24 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 s390x 0.2.5-3 [29.7 kB]
-Get:25 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 s390x 4.6.3-1 [350 kB]
-Get:26 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
-Get:27 http://ftp.de.debian.org/debian/ unstable/main libice6 s390x 2:1.0.7-2+b1 [59.2 kB]
-Get:28 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 s390x 8d-1 [190 kB]
-Get:29 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
-Get:30 http://ftp.de.debian.org/debian/ unstable/main libthai0 s390x 0.1.17-1 [46.6 kB]
-Get:31 http://ftp.de.debian.org/debian/ unstable/main libxft2 s390x 2.2.0-3 [61.0 kB]
-Get:32 http://ftp.de.debian.org/debian/ unstable/main fontconfig s390x 2.8.0-3.1 [337 kB]
-Get:33 http://ftp.de.debian.org/debian/ unstable/main libpango1.0-0 s390x 1.29.4-2 [468 kB]
-Get:34 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 s390x 8.12-4+b1 [114 kB]
-Get:35 http://ftp.de.debian.org/debian/ unstable/main libsm6 s390x 2:1.2.0-2 [30.3 kB]
-Get:36 http://ftp.de.debian.org/debian/ unstable/main libtiff4 s390x 3.9.6-1 [211 kB]
-Get:37 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
-Get:38 http://ftp.de.debian.org/debian/ unstable/main libxext6 s390x 2:1.3.0-3 [53.8 kB]
-Get:39 http://ftp.de.debian.org/debian/ unstable/main libxss1 s390x 1:1.2.1-2 [16.9 kB]
-Get:40 http://ftp.de.debian.org/debian/ unstable/main libxt6 s390x 1:1.1.1-2 [213 kB]
-Get:41 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.1 [214 kB]
-Get:42 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.21-6+b1 [1184 kB]
-Get:43 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.1-1 [1070 kB]
-Get:44 http://ftp.de.debian.org/debian/ unstable/main file s390x 5.10-1 [53.6 kB]
-Get:45 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-5+b1 [157 kB]
-Get:46 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.105 [78.7 kB]
-Get:47 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
-Get:48 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-5+b1 [2163 kB]
-Get:49 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:50 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:51 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120115 [693 kB]
-Get:52 http://ftp.de.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
-Get:53 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.6 s390x 4.6.3-1 [4788 kB]
-Get:54 http://ftp.de.debian.org/debian/ unstable/main gfortran s390x 4:4.6.2-4 [1132 B]
-Get:55 http://ftp.de.debian.org/debian/ unstable/main libblas3gf s390x 1.2.20110419-2 [221 kB]
-Get:56 http://ftp.de.debian.org/debian/ unstable/main libblas-dev s390x 1.2.20110419-2 [230 kB]
-Get:57 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev s390x 1.0.6-1 [38.8 kB]
-Get:58 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev s390x 8d-1 [297 kB]
-Get:59 http://ftp.de.debian.org/debian/ unstable/main liblapack3gf s390x 3.3.1-1 [4037 kB]
-Get:60 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev s390x 3.3.1-1 [4296 kB]
-Get:61 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev s390x 5.9-4+b1 [121 kB]
-Get:62 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev s390x 5.9-4+b1 [413 kB]
-Get:63 http://ftp.de.debian.org/debian/ unstable/main libpaper1 s390x 1.1.24+nmu1 [21.9 kB]
-Get:64 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils s390x 1.1.24+nmu1 [18.3 kB]
-Get:65 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev s390x 8.12-4+b1 [318 kB]
-Get:66 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.6.dfsg-2 [217 kB]
-Get:67 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev s390x 1.2.47-1 [273 kB]
-Get:68 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev s390x 6.2-8+b1 [272 kB]
-Get:69 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev s390x 6.2-8+b1 [898 B]
-Get:70 http://ftp.de.debian.org/debian/ unstable/main zip s390x 3.0-4 [349 kB]
-Get:71 http://ftp.de.debian.org/debian/ unstable/main unzip s390x 6.0-5 [202 kB]
-Get:72 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
-Get:73 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 s390x 8.5.11-1 [1652 kB]
-Get:74 http://ftp.de.debian.org/debian/ unstable/main tk8.5 s390x 8.5.11-1 [1224 kB]
-Get:75 http://ftp.de.debian.org/debian/ unstable/main r-base-core s390x 2.14.2-1 [20.2 MB]
-Get:76 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 2.14.2-1 [3894 B]
+Get:1 http://ftp.de.debian.org/debian/ unstable/main ncurses-bin s390x 5.9-6 [336 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main libgomp1 s390x 4.7.0-3 [29.8 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main gcc-4.7-base s390x 4.7.0-3 [139 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libstdc++6 s390x 4.7.0-3 [379 kB]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main libgcc1 s390x 1:4.7.0-3 [31.0 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libtinfo5 s390x 5.9-6 [280 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main libncurses5 s390x 5.9-6 [304 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.1-1 [40.5 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 5.11-1 [256 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 1:8.30-4 [253 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libexpat1 s390x 2.1.0-1 [144 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 s390x 2.4.9-1 [465 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 s390x 2.8.0-3.1 [285 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 s390x 0.24.4-1 [348 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 s390x 1.2.49-1 [193 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main libxau6 s390x 1:1.0.7-1 [18.6 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 s390x 1:1.1.0-4 [23.5 kB]
+Get:20 http://ftp.de.debian.org/debian/ unstable/main libxcb1 s390x 1.8.1-1 [52.7 kB]
+Get:21 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
+Get:22 http://ftp.de.debian.org/debian/ unstable/main libx11-6 s390x 2:1.4.4-4 [907 kB]
+Get:23 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 s390x 1.8.1-1 [19.0 kB]
+Get:24 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 s390x 1.8.1-1 [10.2 kB]
+Get:25 http://ftp.de.debian.org/debian/ unstable/main libxrender1 s390x 1:0.9.6-2 [32.9 kB]
+Get:26 http://ftp.de.debian.org/debian/ unstable/main libcairo2 s390x 1.12.0-2 [895 kB]
+Get:27 http://ftp.de.debian.org/debian/ unstable/main libffi5 s390x 3.0.10-3+b1 [26.2 kB]
+Get:28 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.32.0-4 [2084 kB]
+Get:29 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.7.8.dfsg-7 [894 kB]
+Get:30 http://ftp.de.debian.org/debian/ unstable/main libcroco3 s390x 0.6.5-1 [151 kB]
+Get:31 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 s390x 0.2.5-3 [29.7 kB]
+Get:32 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 s390x 4.7.0-3 [358 kB]
+Get:33 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
+Get:34 http://ftp.de.debian.org/debian/ unstable/main libice6 s390x 2:1.0.8-2 [65.6 kB]
+Get:35 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 s390x 8d-1 [190 kB]
+Get:36 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
+Get:37 http://ftp.de.debian.org/debian/ unstable/main libthai0 s390x 0.1.17-1 [46.6 kB]
+Get:38 http://ftp.de.debian.org/debian/ unstable/main libxft2 s390x 2.2.0-3 [61.0 kB]
+Get:39 http://ftp.de.debian.org/debian/ unstable/main fontconfig s390x 2.8.0-3.1 [337 kB]
+Get:40 http://ftp.de.debian.org/debian/ unstable/main libpango1.0-0 s390x 1.30.0-1 [473 kB]
+Get:41 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 s390x 1:8.30-4 [126 kB]
+Get:42 http://ftp.de.debian.org/debian/ unstable/main libsm6 s390x 2:1.2.1-2 [34.9 kB]
+Get:43 http://ftp.de.debian.org/debian/ unstable/main libtiff4 s390x 3.9.6-2 [211 kB]
+Get:44 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
+Get:45 http://ftp.de.debian.org/debian/ unstable/main libxext6 s390x 2:1.3.0-3 [53.8 kB]
+Get:46 http://ftp.de.debian.org/debian/ unstable/main libxss1 s390x 1:1.2.1-2 [16.9 kB]
+Get:47 http://ftp.de.debian.org/debian/ unstable/main libxt6 s390x 1:1.1.1-2 [213 kB]
+Get:48 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.1 [214 kB]
+Get:49 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.21-7 [1187 kB]
+Get:50 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.1-2 [1070 kB]
+Get:51 http://ftp.de.debian.org/debian/ unstable/main g++-4.6 s390x 4.6.3-3 [5558 kB]
+Get:52 http://ftp.de.debian.org/debian/ unstable/main libstdc++6-4.6-dev s390x 4.6.3-3 [1719 kB]
+Get:53 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6 s390x 4.6.3-3 [4358 kB]
+Get:54 http://ftp.de.debian.org/debian/ unstable/main cpp-4.6 s390x 4.6.3-3 [4048 kB]
+Get:55 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6-base s390x 4.6.3-3 [140 kB]
+Get:56 http://ftp.de.debian.org/debian/ unstable/main file s390x 5.11-1 [53.9 kB]
+Get:57 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-5+b1 [157 kB]
+Get:58 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.109 [79.4 kB]
+Get:59 http://ftp.de.debian.org/debian/ unstable/main cpp s390x 4:4.6.3-4 [16.3 kB]
+Get:60 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
+Get:61 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-5+b1 [2163 kB]
+Get:62 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:63 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:64 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20120410 [694 kB]
+Get:65 http://ftp.de.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
+Get:66 http://ftp.de.debian.org/debian/ unstable/main gcc s390x 4:4.6.3-4 [5038 B]
+Get:67 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.6 s390x 4.6.3-3 [4789 kB]
+Get:68 http://ftp.de.debian.org/debian/ unstable/main gfortran s390x 4:4.6.3-4 [1132 B]
+Get:69 http://ftp.de.debian.org/debian/ unstable/main libblas3gf s390x 1.2.20110419-2 [221 kB]
+Get:70 http://ftp.de.debian.org/debian/ unstable/main libblas-dev s390x 1.2.20110419-2 [230 kB]
+Get:71 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev s390x 1.0.6-1 [38.8 kB]
+Get:72 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev s390x 8d-1 [297 kB]
+Get:73 http://ftp.de.debian.org/debian/ unstable/main liblapack3gf s390x 3.3.1-1 [4037 kB]
+Get:74 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev s390x 3.3.1-1 [4296 kB]
+Get:75 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev s390x 5.9-6 [121 kB]
+Get:76 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev s390x 5.9-6 [414 kB]
+Get:77 http://ftp.de.debian.org/debian/ unstable/main libpaper1 s390x 1.1.24+nmu1 [21.9 kB]
+Get:78 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils s390x 1.1.24+nmu1 [18.3 kB]
+Get:79 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev s390x 1:8.30-4 [359 kB]
+Get:80 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.6.dfsg-2 [217 kB]
+Get:81 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev s390x 1.2.49-1 [273 kB]
+Get:82 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev s390x 6.2-8+b1 [272 kB]
+Get:83 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev s390x 6.2-8+b1 [898 B]
+Get:84 http://ftp.de.debian.org/debian/ unstable/main zip s390x 3.0-4 [349 kB]
+Get:85 http://ftp.de.debian.org/debian/ unstable/main unzip s390x 6.0-6 [203 kB]
+Get:86 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:87 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 s390x 8.5.11-1 [1652 kB]
+Get:88 http://ftp.de.debian.org/debian/ unstable/main tk8.5 s390x 8.5.11-1 [1224 kB]
+Get:89 http://ftp.de.debian.org/debian/ unstable/main r-base-core s390x 2.15.0-1 [20.5 MB]
+Get:90 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 2.15.0-1 [3900 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 57.4 MB in 25s (2259 kB/s)
-Selecting previously unselected package libpipeline1.
-(Reading database ... 10784 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_s390x.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_s390x.deb) ...
-Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-4+b1_s390x.deb) ...
-Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_s390x.deb) ...
-Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_s390x.deb) ...
+Fetched 75.2 MB in 7s (10.4 MB/s)
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace ncurses-bin 5.9-5 (using .../ncurses-bin_5.9-6_s390x.deb) ...
+Unpacking replacement ncurses-bin ...
+Setting up ncurses-bin (5.9-6) ...
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace libgomp1:s390x 4.7.0-1 (using .../libgomp1_4.7.0-3_s390x.deb) ...
+Unpacking replacement libgomp1:s390x ...
+Preparing to replace gcc-4.7-base:s390x 4.7.0-1 (using .../gcc-4.7-base_4.7.0-3_s390x.deb) ...
+Unpacking replacement gcc-4.7-base:s390x ...
+Setting up gcc-4.7-base:s390x (4.7.0-3) ...
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace libstdc++6:s390x 4.7.0-1 (using .../libstdc++6_4.7.0-3_s390x.deb) ...
+Unpacking replacement libstdc++6:s390x ...
+Setting up libstdc++6:s390x (4.7.0-3) ...
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace libgcc1:s390x 1:4.7.0-1 (using .../libgcc1_1%3a4.7.0-3_s390x.deb) ...
+Unpacking replacement libgcc1:s390x ...
+Setting up libgcc1:s390x (1:4.7.0-3) ...
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace libtinfo5:s390x 5.9-5 (using .../libtinfo5_5.9-6_s390x.deb) ...
+Unpacking replacement libtinfo5:s390x ...
+Setting up libtinfo5:s390x (5.9-6) ...
+(Reading database ... 10853 files and directories currently installed.)
+Preparing to replace libncurses5:s390x 5.9-5 (using .../libncurses5_5.9-6_s390x.deb) ...
+Unpacking replacement libncurses5:s390x ...
+Setting up libncurses5:s390x (5.9-6) ...
+Selecting previously unselected package libpipeline1:s390x.
+(Reading database ... 10853 files and directories currently installed.)
+Unpacking libpipeline1:s390x (from .../libpipeline1_1.2.1-1_s390x.deb) ...
+Selecting previously unselected package libmagic1:s390x.
+Unpacking libmagic1:s390x (from .../libmagic1_5.11-1_s390x.deb) ...
+Selecting previously unselected package libpcre3:s390x.
+Unpacking libpcre3:s390x (from .../libpcre3_1%3a8.30-4_s390x.deb) ...
+Selecting previously unselected package libexpat1:s390x.
+Unpacking libexpat1:s390x (from .../libexpat1_2.1.0-1_s390x.deb) ...
+Selecting previously unselected package libfreetype6:s390x.
+Unpacking libfreetype6:s390x (from .../libfreetype6_2.4.9-1_s390x.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3.1_all.deb) ...
-Selecting previously unselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_s390x.deb) ...
-Selecting previously unselected package libpixman-1-0.
-Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_s390x.deb) ...
-Selecting previously unselected package libpng12-0.
-Unpacking libpng12-0 (from .../libpng12-0_1.2.47-1_s390x.deb) ...
-Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_s390x.deb) ...
-Selecting previously unselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_s390x.deb) ...
-Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_s390x.deb) ...
+Selecting previously unselected package libfontconfig1:s390x.
+Unpacking libfontconfig1:s390x (from .../libfontconfig1_2.8.0-3.1_s390x.deb) ...
+Selecting previously unselected package libpixman-1-0:s390x.
+Unpacking libpixman-1-0:s390x (from .../libpixman-1-0_0.24.4-1_s390x.deb) ...
+Selecting previously unselected package libpng12-0:s390x.
+Unpacking libpng12-0:s390x (from .../libpng12-0_1.2.49-1_s390x.deb) ...
+Selecting previously unselected package libxau6:s390x.
+Unpacking libxau6:s390x (from .../libxau6_1%3a1.0.7-1_s390x.deb) ...
+Selecting previously unselected package libxdmcp6:s390x.
+Unpacking libxdmcp6:s390x (from .../libxdmcp6_1%3a1.1.0-4_s390x.deb) ...
+Selecting previously unselected package libxcb1:s390x.
+Unpacking libxcb1:s390x (from .../libxcb1_1.8.1-1_s390x.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
-Selecting previously unselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_s390x.deb) ...
-Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_s390x.deb) ...
-Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_s390x.deb) ...
-Selecting previously unselected package libxrender1.
-Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_s390x.deb) ...
-Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_s390x.deb) ...
-Selecting previously unselected package libffi5.
-Unpacking libffi5 (from .../libffi5_3.0.10-3+b1_s390x.deb) ...
-Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_s390x.deb) ...
+Selecting previously unselected package libx11-6:s390x.
+Unpacking libx11-6:s390x (from .../libx11-6_2%3a1.4.4-4_s390x.deb) ...
+Selecting previously unselected package libxcb-render0:s390x.
+Unpacking libxcb-render0:s390x (from .../libxcb-render0_1.8.1-1_s390x.deb) ...
+Selecting previously unselected package libxcb-shm0:s390x.
+Unpacking libxcb-shm0:s390x (from .../libxcb-shm0_1.8.1-1_s390x.deb) ...
+Selecting previously unselected package libxrender1:s390x.
+Unpacking libxrender1:s390x (from .../libxrender1_1%3a0.9.6-2_s390x.deb) ...
+Selecting previously unselected package libcairo2:s390x.
+Unpacking libcairo2:s390x (from .../libcairo2_1.12.0-2_s390x.deb) ...
+Selecting previously unselected package libffi5:s390x.
+Unpacking libffi5:s390x (from .../libffi5_3.0.10-3+b1_s390x.deb) ...
+Selecting previously unselected package libglib2.0-0:s390x.
+Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.32.0-4_s390x.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_s390x.deb) ...
-Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_s390x.deb) ...
-Selecting previously unselected package libdatrie1.
-Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_s390x.deb) ...
-Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_s390x.deb) ...
+Selecting previously unselected package libcroco3:s390x.
+Unpacking libcroco3:s390x (from .../libcroco3_0.6.5-1_s390x.deb) ...
+Selecting previously unselected package libdatrie1:s390x.
+Unpacking libdatrie1:s390x (from .../libdatrie1_0.2.5-3_s390x.deb) ...
+Selecting previously unselected package libgfortran3:s390x.
+Unpacking libgfortran3:s390x (from .../libgfortran3_4.7.0-3_s390x.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
-Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2+b1_s390x.deb) ...
-Selecting previously unselected package libjpeg8.
-Unpacking libjpeg8 (from .../libjpeg8_8d-1_s390x.deb) ...
+Selecting previously unselected package libice6:s390x.
+Unpacking libice6:s390x (from .../libice6_2%3a1.0.8-2_s390x.deb) ...
+Selecting previously unselected package libjpeg8:s390x.
+Unpacking libjpeg8:s390x (from .../libjpeg8_8d-1_s390x.deb) ...
Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.17-1_all.deb) ...
-Selecting previously unselected package libthai0.
-Unpacking libthai0 (from .../libthai0_0.1.17-1_s390x.deb) ...
-Selecting previously unselected package libxft2.
-Unpacking libxft2 (from .../libxft2_2.2.0-3_s390x.deb) ...
+Selecting previously unselected package libthai0:s390x.
+Unpacking libthai0:s390x (from .../libthai0_0.1.17-1_s390x.deb) ...
+Selecting previously unselected package libxft2:s390x.
+Unpacking libxft2:s390x (from .../libxft2_2.2.0-3_s390x.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_s390x.deb) ...
-Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_s390x.deb) ...
-Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4+b1_s390x.deb) ...
-Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_s390x.deb) ...
-Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_s390x.deb) ...
-Selecting previously unselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
-Selecting previously unselected package libxext6.
-Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3_s390x.deb) ...
-Selecting previously unselected package libxss1.
-Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_s390x.deb) ...
-Selecting previously unselected package libxt6.
-Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_s390x.deb) ...
+Selecting previously unselected package libpango1.0-0:s390x.
+Unpacking libpango1.0-0:s390x (from .../libpango1.0-0_1.30.0-1_s390x.deb) ...
+Selecting previously unselected package libpcrecpp0:s390x.
+Unpacking libpcrecpp0:s390x (from .../libpcrecpp0_1%3a8.30-4_s390x.deb) ...
+Selecting previously unselected package libsm6:s390x.
+Unpacking libsm6:s390x (from .../libsm6_2%3a1.2.1-2_s390x.deb) ...
+Selecting previously unselected package libtiff4:s390x.
+Unpacking libtiff4:s390x (from .../libtiff4_3.9.6-2_s390x.deb) ...
+Selecting previously unselected package libunistring0:s390x.
+Unpacking libunistring0:s390x (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
+Selecting previously unselected package libxext6:s390x.
+Unpacking libxext6:s390x (from .../libxext6_2%3a1.3.0-3_s390x.deb) ...
+Selecting previously unselected package libxss1:s390x.
+Unpacking libxss1:s390x (from .../libxss1_1%3a1.2.1-2_s390x.deb) ...
+Selecting previously unselected package libxt6:s390x.
+Unpacking libxt6:s390x (from .../libxt6_1%3a1.1.1-2_s390x.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_s390x.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6+b1_s390x.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-7_s390x.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_s390x.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_s390x.deb) ...
+Preparing to replace g++-4.6 4.6.3-1 (using .../g++-4.6_4.6.3-3_s390x.deb) ...
+Unpacking replacement g++-4.6 ...
+Preparing to replace libstdc++6-4.6-dev 4.6.3-1 (using .../libstdc++6-4.6-dev_4.6.3-3_s390x.deb) ...
+Unpacking replacement libstdc++6-4.6-dev ...
+Preparing to replace gcc-4.6 4.6.3-1 (using .../gcc-4.6_4.6.3-3_s390x.deb) ...
+Unpacking replacement gcc-4.6 ...
+Preparing to replace cpp-4.6 4.6.3-1 (using .../cpp-4.6_4.6.3-3_s390x.deb) ...
+Unpacking replacement cpp-4.6 ...
+Preparing to replace gcc-4.6-base:s390x 4.6.3-1 (using .../gcc-4.6-base_4.6.3-3_s390x.deb) ...
+Unpacking replacement gcc-4.6-base:s390x ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.10-1_s390x.deb) ...
+Unpacking file (from .../archives/file_5.11-1_s390x.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5+b1_s390x.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
+Preparing to replace cpp 4:4.6.3-3 (using .../cpp_4%3a4.6.3-4_s390x.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15+b1_s390x.deb) ...
Selecting previously unselected package gettext.
@@ -362,47 +424,50 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
+Preparing to replace gcc 4:4.6.3-3 (using .../gcc_4%3a4.6.3-4_s390x.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_s390x.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-3_s390x.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_s390x.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_s390x.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_s390x.deb) ...
Selecting previously unselected package libblas-dev.
Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-2_s390x.deb) ...
-Selecting previously unselected package libbz2-dev.
-Unpacking libbz2-dev (from .../libbz2-dev_1.0.6-1_s390x.deb) ...
-Selecting previously unselected package libjpeg8-dev.
-Unpacking libjpeg8-dev (from .../libjpeg8-dev_8d-1_s390x.deb) ...
+Selecting previously unselected package libbz2-dev:s390x.
+Unpacking libbz2-dev:s390x (from .../libbz2-dev_1.0.6-1_s390x.deb) ...
+Selecting previously unselected package libjpeg8-dev:s390x.
+Unpacking libjpeg8-dev:s390x (from .../libjpeg8-dev_8d-1_s390x.deb) ...
Selecting previously unselected package liblapack3gf.
Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_s390x.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_s390x.deb) ...
-Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4+b1_s390x.deb) ...
+Selecting previously unselected package libtinfo-dev:s390x.
+Unpacking libtinfo-dev:s390x (from .../libtinfo-dev_5.9-6_s390x.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4+b1_s390x.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_s390x.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_s390x.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_s390x.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4+b1_s390x.deb) ...
-Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390x.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_s390x.deb) ...
+Selecting previously unselected package zlib1g-dev:s390x.
+Unpacking zlib1g-dev:s390x (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_s390x.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_s390x.deb) ...
-Selecting previously unselected package libreadline6-dev.
-Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8+b1_s390x.deb) ...
-Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8+b1_s390x.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_s390x.deb) ...
+Selecting previously unselected package libreadline6-dev:s390x.
+Unpacking libreadline6-dev:s390x (from .../libreadline6-dev_6.2-8+b1_s390x.deb) ...
+Selecting previously unselected package libreadline-dev:s390x.
+Unpacking libreadline-dev:s390x (from .../libreadline-dev_6.2-8+b1_s390x.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../archives/zip_3.0-4_s390x.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../archives/unzip_6.0-5_s390x.deb) ...
+Unpacking unzip (from .../archives/unzip_6.0-6_s390x.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -410,114 +475,122 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_s390x.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_s390x.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_s390x.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_s390x.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libpcre3 (8.12-4+b1) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
+Setting up libgomp1:s390x (4.7.0-3) ...
+Setting up libpipeline1:s390x (1.2.1-1) ...
+Setting up libmagic1:s390x (5.11-1) ...
+Setting up libpcre3:s390x (1:8.30-4) ...
+Setting up libexpat1:s390x (2.1.0-1) ...
+Setting up libfreetype6:s390x (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libpng12-0 (1.2.47-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
-Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libfontconfig1:s390x (2.8.0-3.1) ...
+Setting up libpixman-1-0:s390x (0.24.4-1) ...
+Setting up libpng12-0:s390x (1.2.49-1) ...
+Setting up libxau6:s390x (1:1.0.7-1) ...
+Setting up libxdmcp6:s390x (1:1.1.0-4) ...
+Setting up libxcb1:s390x (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3+b1) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libx11-6:s390x (2:1.4.4-4) ...
+Setting up libxcb-render0:s390x (1.8.1-1) ...
+Setting up libxcb-shm0:s390x (1.8.1-1) ...
+Setting up libxrender1:s390x (1:0.9.6-2) ...
+Setting up libcairo2:s390x (1.12.0-2) ...
+Setting up libffi5:s390x (3.0.10-3+b1) ...
+Setting up libglib2.0-0:s390x (2.32.0-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libcroco3:s390x (0.6.5-1) ...
+Setting up libdatrie1:s390x (0.2.5-3) ...
+Setting up libgfortran3:s390x (4.7.0-3) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2+b1) ...
-Setting up libjpeg8 (8d-1) ...
+Setting up libice6:s390x (2:1.0.8-2) ...
+Setting up libjpeg8:s390x (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3) ...
+Setting up libthai0:s390x (0.1.17-1) ...
+Setting up libxft2:s390x (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4+b1) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5+b1) ...
-Setting up libxext6 (2:1.3.0-3) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2) ...
+Setting up libpango1.0-0:s390x (1.30.0-1) ...
+Setting up libpcrecpp0:s390x (1:8.30-4) ...
+Setting up libsm6:s390x (2:1.2.1-2) ...
+Setting up libtiff4:s390x (3.9.6-2) ...
+Setting up libunistring0:s390x (0.9.3-5+b1) ...
+Setting up libxext6:s390x (2:1.3.0-3) ...
+Setting up libxss1:s390x (1:1.2.1-2) ...
+Setting up libxt6:s390x (1:1.1.1-2) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6+b1) ...
-Setting up man-db (2.6.1-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up gcc-4.6-base:s390x (4.6.3-3) ...
+Setting up cpp-4.6 (4.6.3-3) ...
+Setting up gcc-4.6 (4.6.3-3) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5+b1) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
+Setting up cpp (4:4.6.3-4) ...
Setting up html2text (1.3.2a-15+b1) ...
Setting up gettext (0.18.1.1-5+b1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gcc (4:4.6.3-4) ...
+Setting up gfortran-4.6 (4.6.3-3) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
Setting up libblas-dev (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
+Setting up libbz2-dev:s390x (1.0.6-1) ...
+Setting up libjpeg8-dev:s390x (8d-1) ...
Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4+b1) ...
-Setting up libncurses5-dev (5.9-4+b1) ...
+Setting up libtinfo-dev:s390x (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4+b1) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8+b1) ...
-Setting up libreadline-dev (6.2-8+b1) ...
+Setting up libpcre3-dev (1:8.30-4) ...
+Setting up zlib1g-dev:s390x (1:1.2.6.dfsg-2) ...
+Setting up libpng12-dev (1.2.49-1) ...
+Setting up libreadline6-dev:s390x (6.2-8+b1) ...
+Setting up libreadline-dev:s390x (6.2-8+b1) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.0-1) ...
+Setting up g++-4.6 (4.6.3-3) ...
+Setting up libstdc++6-4.6-dev (4.6.3-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 10 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 13 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-s390x s390x (s390x)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.7-1
-Package versions: apt_0.8.15.9+b1 base-files_6.5+b1 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3+b1 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.41 debconf-i18n_1.5.41 debfoster_2.7-1.1+b1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1+b1 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-3 gpgv_1.4.12-3 grep_2.10-1 groff-base_1.21-6+b1 gzip_1.4-2+b1 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3+b1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10+b1 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2+b1 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblocale-gettext-perl_1.05-7+b2 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.10-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-3+b1 libncurses5_5.9-4+b1 libncurses5-dev_5.9-4+b1 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4+b1 libpcre3-dev_8.12-4+b1 libpcrecpp0_8.12-4+b1 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libreadline-dev_6.2-8+b1 libreadline6_6.2-8+b1 libreadline6-dev_6.2-8+b1 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-1 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42.1-2 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4+b1 libtinfo5_5.9-4+b1 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.7-1 login_1:4.1.5-1 lsb-base_3.2+Debian29 make_3.81-8.1+b1 man-db_2.6.1-1 mawk_1.3.3-16+b1 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-4+b1 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3+b1 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.13-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5+b1 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debconf-i18n_1.5.42 debfoster_2.7-1.1+b1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.3-3 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-3 gettext_0.18.1.1-5+b1 gettext-base_0.18.1.1-5+b1 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-3 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15+b1 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.12.0-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3+b1 libfile-fcntllock-perl_0.14-1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8+b1 libgcc1_1:4.7.0-3 libgdbm3_1.8.3-10+b1 libgfortran3_4.7.0-3 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-3 libice6_2:1.0.8-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblocale-gettext-perl_1.05-7+b2 liblzma5_5.1.1alpha+20110809-3+b1 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4+b1 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncurses5-dev_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libreadline-dev_6.2-8+b1 libreadline6_6.2-8+b1 libreadline6-dev_6.2-8+b1 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-2 libslang2_2.2.4-7 libsm6_2:1.2.1-2 libss2_1.42.2-1 libstdc++6_4.7.0-3 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7+b2 libtext-iconv-perl_1.7-5 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5+b1 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_3.2+Debian31 make_3.81-8.1+b1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9+b1 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3+b1 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -528,12 +601,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -543,8 +616,8 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture s390x
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -552,9 +625,9 @@ test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -583,25 +656,25 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build
+ debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -615,44 +688,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -691,7 +764,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -716,27 +789,27 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_s390x.deb'.
- dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../r-bioc-limma_3.10.3-1_s390x.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_s390x.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_s390x.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0450
+Build finished at 20120412-0334
-r-bioc-limma_3.10.3-1_s390x.changes:
+r-bioc-limma_3.12.0~dfsg-1_s390x.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: s390x
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
@@ -744,44 +817,39 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 97a42e3c7baf0601db9e4d4dc25c87ddf292e967 1477070 r-bioc-limma_3.10.3-1_s390x.deb
+ 587b528418fc8e4e3840891e7934552c524a95c2 809774 r-bioc-limma_3.12.0~dfsg-1_s390x.deb
Checksums-Sha256:
- c1bbe80fecc80d0d7eeb8f38fb75a8e2cad2e421c7312a06ed79cdbee7a884f0 1477070 r-bioc-limma_3.10.3-1_s390x.deb
+ f7d1fac1135b8627276fbd2f8a988c7f26c6b0b8c464854fd5bce9b856d734c9 809774 r-bioc-limma_3.12.0~dfsg-1_s390x.deb
Files:
- 1fd83a4a2cbff3f839d90b87e897b5fc 1477070 gnu-r optional r-bioc-limma_3.10.3-1_s390x.deb
+ b931a98b35a4f4a330435e9c6fccd852 809774 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_s390x.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_s390x.deb
-───────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_s390x.deb
+────────────────────────────────────
new debian package, version 2.0.
- size 1477070 bytes: control archive= 1573 bytes.
- 770 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 809774 bytes: control archive= 1538 bytes.
+ 774 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: s390x
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1681
- Depends: libc6 (>= 2.13), r-base-core (>= 2.14.2-1)
+ Installed-Size: 985
+ Depends: libc6 (>= 2.13), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -793,52 +861,51 @@ r-bioc-limma_3.10.3-1_s390x.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 9458 2012-03-07 04:50 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 383 2012-03-07 04:50 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 198253 2012-03-07 04:50 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 3773 2012-03-07 04:50 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2012-03-07 04:50 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 34556 2012-03-07 04:50 ./usr/lib/R/site-library/limma/html/00Index.html
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10632 2012-03-07 04:50 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1352 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 458658 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3284 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 2392 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 6221 2012-03-07 04:50 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 1901 2012-03-07 04:50 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 1711 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rwxr-xr-x root/root 673 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 737677 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 42743 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rwxr-xr-x root/root 89361 2012-03-07 04:50 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 966 2012-03-07 04:50 ./usr/lib/R/site-library/limma/DESCRIPTION
--rw-r--r-- root/root 2173 2012-03-07 04:50 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 518 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 216 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 5603 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 2886 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 1052 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6022 2012-03-07 04:50 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rwxr-xr-x root/root 1230 2012-03-07 04:50 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 04:50 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2012-03-07 04:50 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 560 2012-03-07 04:50 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 2302 2012-03-07 04:50 ./usr/share/doc/r-bioc-limma/copyright
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 9754 2012-04-12 03:34 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 383 2012-04-12 03:34 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 202046 2012-04-12 03:34 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 3828 2012-04-12 03:34 ./usr/lib/R/site-library/limma/R/limma.rdx
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2012-04-12 03:34 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 35015 2012-04-12 03:34 ./usr/lib/R/site-library/limma/html/00Index.html
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 10632 2012-04-12 03:34 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1367 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 472900 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3345 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 2431 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 6317 2012-04-12 03:34 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 1901 2012-04-12 03:34 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 1711 2012-04-12 03:34 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rwxr-xr-x root/root 673 2012-04-12 03:34 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 42743 2012-04-12 03:34 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 91993 2012-04-12 03:34 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 966 2012-04-12 03:34 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 3989 2012-04-12 03:34 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 521 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 220 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 5727 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 2943 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 1050 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 6157 2012-04-12 03:34 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rwxr-xr-x root/root 1230 2012-04-12 03:34 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 03:34 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 264 2012-04-12 03:34 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 27996 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 683 2012-04-12 03:34 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 2457 2012-04-12 03:34 ./usr/share/doc/r-bioc-limma/copyright
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -852,7 +919,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390x-sbuild-09f2bd23-781e-476e-9561-8510bdfcacac/sid-s390x-sbuild/build/buildd-r-bioc-limma_3.10.3-1-s390x-ilG_dm
+Purging /var/lib/schroot/mount/sid-s390x-sbuild-05dddfa4-21bf-4e7f-a8c3-6f6286a6040f/sid-s390x-sbuild/build/buildd-r-bioc-limma_3.12.0~dfsg-1-s390x-h1hFly
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -860,18 +927,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: s390x
-Build-Space: 5336
-Build-Time: 16
+Build-Space: 3272
+Build-Time: 15
Distribution: sid
-Install-Time: 42
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 28
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 107
-Source-Version: 3.10.3-1
-Space: 5336
+Package-Time: 76
+Source-Version: 3.12.0~dfsg-1
+Space: 3272
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0450
-Build needed 00:01:47, 5336k disc space
-Signature with key '96C8554F' requested:
+Finished at 20120412-0334
+Build needed 00:01:16, 3272k disc space
+Signature with key 'BE1C5586' requested:
diff --git a/sparc.log b/sparc.log
index 1336d78..616f55a 100644
--- a/sparc.log
+++ b/sparc.log
@@ -1,4 +1,4 @@
-From buildd at schroeder.debian.org Wed Mar 07 04:59:48 2012
+From buildd at schroeder.debian.org Thu Apr 12 03:38:13 2012
Return-path: <buildd at schroeder.debian.org>
Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
@@ -6,67 +6,68 @@ Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
EMAIL=hostmaster at merikanto.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at schroeder.debian.org>)
- id 1S58ya-0006Ml-8z
- for logs at buildd.debian.org; Wed, 07 Mar 2012 04:59:48 +0000
-Received: from schroeder.debian.org ([193.198.184.11])
+ id 1SIArM-0007hF-Qh
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 03:38:12 +0000
+Received: from [2001:b68:ff:5:203:baff:fe5a:53a5] (helo=schroeder.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=schroeder.debian.org,
EMAIL=hostmaster at schroeder.debian.org (verified)
by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
(Exim 4.72) (envelope-from <buildd at schroeder.debian.org>)
- id 1S58yZ-0008GE-7O
- for logs at buildd.debian.org; Wed, 07 Mar 2012 04:59:47 +0000
+ id 1SIArM-0003fG-16
+ for logs at buildd.debian.org; Thu, 12 Apr 2012 03:38:12 +0000
Received: from buildd by schroeder.debian.org with local (Exim 4.72)
(envelope-from <buildd at schroeder.debian.org>)
- id 1S58yX-00024l-Dj; Wed, 07 Mar 2012 04:59:45 +0000
-Message-Id: <E1S58yX-00024l-Dj at schroeder.debian.org>
+ id 1SIArK-0004nJ-5x; Thu, 12 Apr 2012 03:38:10 +0000
+Message-Id: <E1SIArK-0004nJ-5x at schroeder.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Wed, 7 Mar 2012 04:59:45 +0000
+Date: Thu, 12 Apr 2012 03:38:10 +0000
From: buildd on schroeder <buildd at schroeder.debian.org>
To: logs at buildd.debian.org,buildd-admin at schroeder.debian.org
-Subject: Log for successful build of r-bioc-limma_3.10.3-1 on sparc (dist=sid)
+Subject: Log for successful build of r-bioc-limma_3.12.0~dfsg-1 on sparc
+ (dist=sid)
Key-Id: 24E4F805
Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on schroeder.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.3-1 (sparc) 07 Mar 2012 04:52 ║
+║ r-bioc-limma 3.12.0~dfsg-1 (sparc) 12 Apr 2012 03:32 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.3-1
-Source Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
+Source Version: 3.12.0~dfsg-1
Architecture: sparc
-Get:1 http://ftp.hr.debian.org unstable InRelease [197 kB]
-Get:2 http://incoming.debian.org unstable InRelease [197 kB]
-Get:3 http://ftp.hr.debian.org unstable/main Sources [6231 kB]
-Get:4 http://ftp.hr.debian.org unstable/contrib Sources [55.0 kB]
-Get:5 http://ftp.hr.debian.org unstable/non-free Sources [98.8 kB]
+Get:1 http://ftp.hr.debian.org unstable InRelease [208 kB]
+Get:2 http://incoming.debian.org unstable InRelease [208 kB]
+Get:3 http://ftp.hr.debian.org unstable/main Sources [6216 kB]
+Get:4 http://ftp.hr.debian.org unstable/contrib Sources [54.5 kB]
+Get:5 http://ftp.hr.debian.org unstable/non-free Sources [97.8 kB]
Ign http://incoming.debian.org InRelease
-Get:6 http://ftp.hr.debian.org unstable/main sparc Packages [5757 kB]
-Get:7 http://incoming.debian.org Release.gpg [836 B]
-Get:8 http://incoming.debian.org Release [1616 B]
-Get:9 http://incoming.debian.org unstable/main Sources [6231 kB]
-Get:10 http://ftp.hr.debian.org unstable/contrib sparc Packages [36.9 kB]
+Get:6 http://incoming.debian.org Release.gpg [836 B]
+Get:7 http://ftp.hr.debian.org unstable/main sparc Packages [5815 kB]
+Get:8 http://incoming.debian.org Release [1601 B]
+Get:9 http://incoming.debian.org unstable/main Sources [6221 kB]
+Get:10 http://ftp.hr.debian.org unstable/contrib sparc Packages [36.7 kB]
Ign http://ftp.hr.debian.org unstable/contrib TranslationIndex
-Get:11 http://ftp.hr.debian.org unstable/main TranslationIndex [2154 B]
-Get:12 http://ftp.hr.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:13 http://ftp.hr.debian.org unstable/main Translation-en [3906 kB]
-Get:14 http://incoming.debian.org unstable/contrib Sources [55.0 kB]
-Get:15 http://incoming.debian.org unstable/non-free Sources [98.8 kB]
-Get:16 http://incoming.debian.org unstable/main sparc Packages [5757 kB]
-Get:17 http://incoming.debian.org unstable/contrib sparc Packages [36.9 kB]
+Get:11 http://ftp.hr.debian.org unstable/main TranslationIndex [2223 B]
+Get:12 http://ftp.hr.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:13 http://ftp.hr.debian.org unstable/main Translation-en [3936 kB]
+Get:14 http://incoming.debian.org unstable/contrib Sources [54.5 kB]
+Get:15 http://incoming.debian.org unstable/non-free Sources [97.7 kB]
+Get:16 http://incoming.debian.org unstable/main sparc Packages [5815 kB]
+Get:17 http://incoming.debian.org unstable/contrib sparc Packages [36.7 kB]
Ign http://incoming.debian.org unstable/contrib TranslationIndex
-Get:18 http://incoming.debian.org unstable/main TranslationIndex [2154 B]
-Get:19 http://incoming.debian.org Sources [63.4 kB]
-Get:20 http://incoming.debian.org Packages [849 kB]
-Get:21 http://incoming.debian.org unstable/contrib Translation-en [37.1 kB]
-Get:22 http://incoming.debian.org unstable/main Translation-en [3906 kB]
+Get:18 http://incoming.debian.org unstable/main TranslationIndex [2223 B]
+Get:19 http://incoming.debian.org Sources [42.9 kB]
+Get:20 http://incoming.debian.org Packages [682 kB]
+Get:21 http://incoming.debian.org unstable/contrib Translation-en [37.0 kB]
+Get:22 http://incoming.debian.org unstable/main Translation-en [3936 kB]
Ign http://incoming.debian.org Translation-en
-Fetched 33.6 MB in 51s (653 kB/s)
+Fetched 33.5 MB in 37s (902 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -87,11 +88,11 @@ Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 977 kB of source archives.
-Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (dsc) [1995 B]
-Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (tar) [973 kB]
-Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.10.3-1 (diff) [2738 B]
-Fetched 977 kB in 4s (237 kB/s)
+Need to get 288 kB of source archives.
+Get:1 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (dsc) [2030 B]
+Get:2 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (tar) [283 kB]
+Get:3 http://incoming.debian.org/buildd-unstable/ r-bioc-limma 3.12.0~dfsg-1 (diff) [3098 B]
+Fetched 288 kB in 1s (175 kB/s)
Download complete and in download only mode
Check arch
@@ -111,12 +112,12 @@ Installing positive dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 20 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -127,70 +128,74 @@ Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diff
Checking for already installed dependencies...
base-files: already installed (6.7)
base-passwd: already installed (3.5.24)
-bash: already installed (4.2-1)
-coreutils: already installed (8.13-3)
+bash: already installed (4.2-2)
+coreutils: already installed (8.13-3.1)
dash: already installed (0.5.7-3)
-debianutils: already installed (4.2.1)
+debianutils: already installed (4.3)
diffutils: already installed (1:3.2-2)
-dpkg: already installed (1.16.1.2)
-e2fsprogs: already installed (1.42.1-2)
+dpkg: already installed (1.16.2)
+e2fsprogs: already installed (1.42.2-1)
findutils: already installed (4.4.2-4)
grep: already installed (2.10-1)
-gzip: already installed (1.4-2)
+gzip: already installed (1.4-5)
hostname: already installed (3.11)
-ncurses-base: already installed (5.9-4)
-ncurses-bin: already installed (5.9-4)
+ncurses-base: already installed (5.9-5)
+ncurses-bin: already installed (5.9-5)
perl-base: already installed (5.14.2-9)
sed: already installed (4.2.1-9)
login: already installed (1:4.1.5-1)
-sysvinit-utils: already installed (2.88dsf-22)
-sysvinit: already installed (2.88dsf-22)
+sysvinit-utils: already installed (2.88dsf-22.1)
+sysvinit: already installed (2.88dsf-22.1)
tar: already installed (1.26-4)
bsdutils: already installed (1:2.20.1-4)
mount: already installed (2.20.1-4)
util-linux: already installed (2.20.1-4)
libc6-dev: already installed (2.13-27)
libc6-dev-sparc64: already installed (2.13-27)
-gcc: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.2-4 >= 4:4.4.3 is satisfied)
+gcc: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.3-4 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.1)
-dpkg-dev: already installed (1.16.1.2 >= 1.13.5 is satisfied)
+dpkg-dev: already installed (1.16.2 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20120115
+Using default version 9.20120410
cdbs: missing
r-base-dev: missing
-Using default version 2.14.2-1
+Using default version 2.15.0-1
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils dpatch file fontconfig fontconfig-config gettext gettext-base
- gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
- libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
+ bsdmainutils cpp-4.6 dpatch file fontconfig fontconfig-config g++-4.6
+ gcc-4.6 gcc-4.6-base gcc-4.7-base gettext gettext-base gfortran gfortran-4.6
+ groff-base html2text intltool-debian libblas-dev libblas3gf libbz2-dev
+ libcairo2 libcroco3 libdatrie1 libexpat1 libffi5 libfontconfig1 libfreetype6
+ libgcc1 libgfortran3 libglib2.0-0 libgomp1 libice6 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3gf libmagic1 libncurses5 libncurses5-dev
libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff4 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
- po-debconf r-base-core tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common
- xdg-utils zip zlib1g-dev
+ libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev libthai-data libthai0
+ libtiff4 libtinfo-dev libtinfo5 libunistring0 libx11-6 libx11-data libxau6
+ libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
+ libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf r-base-core tcl8.5
+ tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make curl defoma gettext-doc
- gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc
- libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
- ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
- libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
- texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
- texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
- texlive-latex-extra texinfo texi2html tclreadline gvfs-bin
+ wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make curl
+ defoma g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-4.6-multilib
+ libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg libquadmath-dbg libmudflap0-dbg
+ binutils-gold gettext-doc gfortran-multilib gfortran-doc
+ gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
+ ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
+ ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
+ texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
+ texi2html tclreadline gvfs-bin
Recommended packages:
- autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
- x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev patchutils autopoint libglib2.0-data shared-mime-info libgpm2
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper dpatch file fontconfig fontconfig-config gettext
@@ -205,180 +210,231 @@ The following NEW packages will be installed:
libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6 man-db
po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip
x11-common xdg-utils zip zlib1g-dev
-0 upgraded, 76 newly installed, 0 to remove and 5 not upgraded.
-Need to get 55.1 MB of archives.
-After this operation, 114 MB of additional disk space will be used.
-Get:1 http://ftp.hr.debian.org/debian/ unstable/main libpipeline1 sparc 1.2.1-1 [35.8 kB]
-Get:2 http://ftp.hr.debian.org/debian/ unstable/main libmagic1 sparc 5.10-1 [248 kB]
-Get:3 http://ftp.hr.debian.org/debian/ unstable/main libpcre3 sparc 8.12-4 [231 kB]
-Get:4 http://ftp.hr.debian.org/debian/ unstable/main libexpat1 sparc 2.0.1-7.2 [128 kB]
-Get:5 http://ftp.hr.debian.org/debian/ unstable/main libfreetype6 sparc 2.4.8-1 [401 kB]
-Get:6 http://ftp.hr.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
-Get:7 http://ftp.hr.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
-Get:8 http://ftp.hr.debian.org/debian/ unstable/main libfontconfig1 sparc 2.8.0-3.1 [274 kB]
-Get:9 http://ftp.hr.debian.org/debian/ unstable/main libpixman-1-0 sparc 0.24.4-1 [373 kB]
-Get:10 http://ftp.hr.debian.org/debian/ unstable/main libpng12-0 sparc 1.2.47-1 [181 kB]
-Get:11 http://ftp.hr.debian.org/debian/ unstable/main libxau6 sparc 1:1.0.6-4 [16.1 kB]
-Get:12 http://ftp.hr.debian.org/debian/ unstable/main libxdmcp6 sparc 1:1.1.0-4 [22.0 kB]
-Get:13 http://ftp.hr.debian.org/debian/ unstable/main libxcb1 sparc 1.8-2 [39.5 kB]
-Get:14 http://ftp.hr.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
-Get:15 http://ftp.hr.debian.org/debian/ unstable/main libx11-6 sparc 2:1.4.4-4 [830 kB]
-Get:16 http://ftp.hr.debian.org/debian/ unstable/main libxcb-render0 sparc 1.8-2 [15.6 kB]
-Get:17 http://ftp.hr.debian.org/debian/ unstable/main libxcb-shm0 sparc 1.8-2 [9684 B]
-Get:18 http://ftp.hr.debian.org/debian/ unstable/main libxrender1 sparc 1:0.9.6-2 [28.8 kB]
-Get:19 http://ftp.hr.debian.org/debian/ unstable/main libcairo2 sparc 1.10.2-7 [890 kB]
-Get:20 http://ftp.hr.debian.org/debian/ unstable/main libffi5 sparc 3.0.10-3 [22.7 kB]
-Get:21 http://ftp.hr.debian.org/debian/ unstable/main libglib2.0-0 sparc 2.30.2-6 [1694 kB]
-Get:22 http://ftp.hr.debian.org/debian/ unstable/main libxml2 sparc 2.7.8.dfsg-7 [819 kB]
-Get:23 http://ftp.hr.debian.org/debian/ unstable/main libcroco3 sparc 0.6.4-2 [135 kB]
-Get:24 http://ftp.hr.debian.org/debian/ unstable/main libdatrie1 sparc 0.2.5-3 [26.1 kB]
-Get:25 http://ftp.hr.debian.org/debian/ unstable/main libgfortran3 sparc 4.6.3-1 [260 kB]
-Get:26 http://ftp.hr.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
-Get:27 http://ftp.hr.debian.org/debian/ unstable/main libice6 sparc 2:1.0.7-2 [50.9 kB]
-Get:28 http://ftp.hr.debian.org/debian/ unstable/main libjpeg8 sparc 8d-1 [137 kB]
-Get:29 http://ftp.hr.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
-Get:30 http://ftp.hr.debian.org/debian/ unstable/main libthai0 sparc 0.1.17-1 [43.0 kB]
-Get:31 http://ftp.hr.debian.org/debian/ unstable/main libxft2 sparc 2.2.0-3 [55.0 kB]
-Get:32 http://ftp.hr.debian.org/debian/ unstable/main fontconfig sparc 2.8.0-3.1 [332 kB]
-Get:33 http://ftp.hr.debian.org/debian/ unstable/main libpango1.0-0 sparc 1.29.4-2 [416 kB]
-Get:34 http://ftp.hr.debian.org/debian/ unstable/main libpcrecpp0 sparc 8.12-4 [111 kB]
-Get:35 http://ftp.hr.debian.org/debian/ unstable/main libsm6 sparc 2:1.2.0-2 [28.6 kB]
-Get:36 http://ftp.hr.debian.org/debian/ unstable/main libtiff4 sparc 3.9.6-1 [187 kB]
-Get:37 http://ftp.hr.debian.org/debian/ unstable/main libunistring0 sparc 0.9.3-5 [416 kB]
-Get:38 http://ftp.hr.debian.org/debian/ unstable/main libxext6 sparc 2:1.3.0-3 [47.5 kB]
-Get:39 http://ftp.hr.debian.org/debian/ unstable/main libxss1 sparc 1:1.2.1-2 [15.9 kB]
-Get:40 http://ftp.hr.debian.org/debian/ unstable/main libxt6 sparc 1:1.1.1-2 [184 kB]
-Get:41 http://ftp.hr.debian.org/debian/ unstable/main bsdmainutils sparc 9.0.1 [205 kB]
-Get:42 http://ftp.hr.debian.org/debian/ unstable/main groff-base sparc 1.21-6 [1155 kB]
-Get:43 http://ftp.hr.debian.org/debian/ unstable/main man-db sparc 2.6.1-1 [1039 kB]
-Get:44 http://ftp.hr.debian.org/debian/ unstable/main file sparc 5.10-1 [52.5 kB]
-Get:45 http://ftp.hr.debian.org/debian/ unstable/main gettext-base sparc 0.18.1.1-5 [140 kB]
-Get:46 http://ftp.hr.debian.org/debian/ unstable/main cdbs all 0.4.105 [78.7 kB]
-Get:47 http://ftp.hr.debian.org/debian/ unstable/main html2text sparc 1.3.2a-15 [100 kB]
-Get:48 http://ftp.hr.debian.org/debian/ unstable/main gettext sparc 0.18.1.1-5 [1983 kB]
-Get:49 http://ftp.hr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:50 http://ftp.hr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:51 http://ftp.hr.debian.org/debian/ unstable/main debhelper all 9.20120115 [693 kB]
-Get:52 http://ftp.hr.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
-Get:53 http://ftp.hr.debian.org/debian/ unstable/main gfortran-4.6 sparc 4.6.3-1 [4152 kB]
-Get:54 http://ftp.hr.debian.org/debian/ unstable/main gfortran sparc 4:4.6.2-4 [1132 B]
-Get:55 http://ftp.hr.debian.org/debian/ unstable/main libblas3gf sparc 1.2.20110419-2 [188 kB]
-Get:56 http://ftp.hr.debian.org/debian/ unstable/main libblas-dev sparc 1.2.20110419-2 [200 kB]
-Get:57 http://ftp.hr.debian.org/debian/ unstable/main libbz2-dev sparc 1.0.6-1 [36.0 kB]
-Get:58 http://ftp.hr.debian.org/debian/ unstable/main libjpeg8-dev sparc 8d-1 [243 kB]
-Get:59 http://ftp.hr.debian.org/debian/ unstable/main liblapack3gf sparc 3.3.1-1 [3975 kB]
-Get:60 http://ftp.hr.debian.org/debian/ unstable/main liblapack-dev sparc 3.3.1-1 [4389 kB]
-Get:61 http://ftp.hr.debian.org/debian/ unstable/main libtinfo-dev sparc 5.9-4 [97.8 kB]
-Get:62 http://ftp.hr.debian.org/debian/ unstable/main libncurses5-dev sparc 5.9-4 [385 kB]
-Get:63 http://ftp.hr.debian.org/debian/ unstable/main libpaper1 sparc 1.1.24+nmu1 [21.1 kB]
-Get:64 http://ftp.hr.debian.org/debian/ unstable/main libpaper-utils sparc 1.1.24+nmu1 [17.9 kB]
-Get:65 http://ftp.hr.debian.org/debian/ unstable/main libpcre3-dev sparc 8.12-4 [312 kB]
-Get:66 http://ftp.hr.debian.org/debian/ unstable/main zlib1g-dev sparc 1:1.2.6.dfsg-2 [209 kB]
-Get:67 http://ftp.hr.debian.org/debian/ unstable/main libpng12-dev sparc 1.2.47-1 [264 kB]
-Get:68 http://ftp.hr.debian.org/debian/ unstable/main libreadline6-dev sparc 6.2-8 [258 kB]
-Get:69 http://ftp.hr.debian.org/debian/ unstable/main libreadline-dev sparc 6.2-8 [892 B]
-Get:70 http://ftp.hr.debian.org/debian/ unstable/main zip sparc 3.0-4 [335 kB]
-Get:71 http://ftp.hr.debian.org/debian/ unstable/main unzip sparc 6.0-5 [191 kB]
-Get:72 http://ftp.hr.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
-Get:73 http://ftp.hr.debian.org/debian/ unstable/main tcl8.5 sparc 8.5.11-1 [1579 kB]
-Get:74 http://ftp.hr.debian.org/debian/ unstable/main tk8.5 sparc 8.5.11-1 [1122 kB]
-Get:75 http://ftp.hr.debian.org/debian/ unstable/main r-base-core sparc 2.14.2-1 [20.1 MB]
-Get:76 http://ftp.hr.debian.org/debian/ unstable/main r-base-dev all 2.14.2-1 [3894 B]
+The following packages will be upgraded:
+ cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base gcc-4.7-base libgcc1 libgomp1
+ libncurses5 libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin
+12 upgraded, 76 newly installed, 0 to remove and 8 not upgraded.
+Need to get 71.6 MB of archives.
+After this operation, 113 MB of additional disk space will be used.
+Get:1 http://ftp.hr.debian.org/debian/ unstable/main ncurses-bin sparc 5.9-6 [334 kB]
+Get:2 http://ftp.hr.debian.org/debian/ unstable/main libgomp1 sparc 4.7.0-2 [23.0 kB]
+Get:3 http://ftp.hr.debian.org/debian/ unstable/main gcc-4.7-base sparc 4.7.0-2 [139 kB]
+Get:4 http://ftp.hr.debian.org/debian/ unstable/main libstdc++6 sparc 4.7.0-2 [322 kB]
+Get:5 http://ftp.hr.debian.org/debian/ unstable/main libgcc1 sparc 1:4.7.0-2 [30.2 kB]
+Get:6 http://ftp.hr.debian.org/debian/ unstable/main libtinfo5 sparc 5.9-6 [267 kB]
+Get:7 http://ftp.hr.debian.org/debian/ unstable/main libncurses5 sparc 5.9-6 [279 kB]
+Get:8 http://ftp.hr.debian.org/debian/ unstable/main libpipeline1 sparc 1.2.1-1 [35.8 kB]
+Get:9 http://ftp.hr.debian.org/debian/ unstable/main libmagic1 sparc 5.11-1 [249 kB]
+Get:10 http://ftp.hr.debian.org/debian/ unstable/main libpcre3 sparc 1:8.30-4 [246 kB]
+Get:11 http://ftp.hr.debian.org/debian/ unstable/main libexpat1 sparc 2.1.0-1 [131 kB]
+Get:12 http://ftp.hr.debian.org/debian/ unstable/main libfreetype6 sparc 2.4.9-1 [410 kB]
+Get:13 http://ftp.hr.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33-2 [1552 kB]
+Get:14 http://ftp.hr.debian.org/debian/ unstable/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:15 http://ftp.hr.debian.org/debian/ unstable/main libfontconfig1 sparc 2.8.0-3.1 [274 kB]
+Get:16 http://ftp.hr.debian.org/debian/ unstable/main libpixman-1-0 sparc 0.24.4-1 [373 kB]
+Get:17 http://ftp.hr.debian.org/debian/ unstable/main libpng12-0 sparc 1.2.49-1 [181 kB]
+Get:18 http://ftp.hr.debian.org/debian/ unstable/main libxau6 sparc 1:1.0.7-1 [17.6 kB]
+Get:19 http://ftp.hr.debian.org/debian/ unstable/main libxdmcp6 sparc 1:1.1.0-4 [22.0 kB]
+Get:20 http://ftp.hr.debian.org/debian/ unstable/main libxcb1 sparc 1.8.1-1 [39.7 kB]
+Get:21 http://ftp.hr.debian.org/debian/ unstable/main libx11-data all 2:1.4.4-4 [187 kB]
+Get:22 http://ftp.hr.debian.org/debian/ unstable/main libx11-6 sparc 2:1.4.4-4 [830 kB]
+Get:23 http://ftp.hr.debian.org/debian/ unstable/main libxcb-render0 sparc 1.8.1-1 [15.6 kB]
+Get:24 http://ftp.hr.debian.org/debian/ unstable/main libxcb-shm0 sparc 1.8.1-1 [9692 B]
+Get:25 http://ftp.hr.debian.org/debian/ unstable/main libxrender1 sparc 1:0.9.6-2 [28.8 kB]
+Get:26 http://ftp.hr.debian.org/debian/ unstable/main libcairo2 sparc 1.12.0-2 [849 kB]
+Get:27 http://ftp.hr.debian.org/debian/ unstable/main libffi5 sparc 3.0.10-3 [22.7 kB]
+Get:28 http://ftp.hr.debian.org/debian/ unstable/main libglib2.0-0 sparc 2.32.0-4 [1902 kB]
+Get:29 http://ftp.hr.debian.org/debian/ unstable/main libxml2 sparc 2.7.8.dfsg-7 [819 kB]
+Get:30 http://ftp.hr.debian.org/debian/ unstable/main libcroco3 sparc 0.6.5-1 [135 kB]
+Get:31 http://ftp.hr.debian.org/debian/ unstable/main libdatrie1 sparc 0.2.5-3 [26.1 kB]
+Get:32 http://ftp.hr.debian.org/debian/ unstable/main libgfortran3 sparc 4.7.0-2 [259 kB]
+Get:33 http://ftp.hr.debian.org/debian/ unstable/main x11-common all 1:7.6+12 [283 kB]
+Get:34 http://ftp.hr.debian.org/debian/ unstable/main libice6 sparc 2:1.0.8-2 [56.0 kB]
+Get:35 http://ftp.hr.debian.org/debian/ unstable/main libjpeg8 sparc 8d-1 [137 kB]
+Get:36 http://ftp.hr.debian.org/debian/ unstable/main libthai-data all 0.1.17-1 [205 kB]
+Get:37 http://ftp.hr.debian.org/debian/ unstable/main libthai0 sparc 0.1.17-1 [43.0 kB]
+Get:38 http://ftp.hr.debian.org/debian/ unstable/main libxft2 sparc 2.2.0-3 [55.0 kB]
+Get:39 http://ftp.hr.debian.org/debian/ unstable/main fontconfig sparc 2.8.0-3.1 [332 kB]
+Get:40 http://ftp.hr.debian.org/debian/ unstable/main libpango1.0-0 sparc 1.30.0-1 [422 kB]
+Get:41 http://ftp.hr.debian.org/debian/ unstable/main libpcrecpp0 sparc 1:8.30-4 [123 kB]
+Get:42 http://ftp.hr.debian.org/debian/ unstable/main libsm6 sparc 2:1.2.1-2 [32.1 kB]
+Get:43 http://ftp.hr.debian.org/debian/ unstable/main libtiff4 sparc 3.9.6-2 [187 kB]
+Get:44 http://ftp.hr.debian.org/debian/ unstable/main libunistring0 sparc 0.9.3-5 [416 kB]
+Get:45 http://ftp.hr.debian.org/debian/ unstable/main libxext6 sparc 2:1.3.0-3 [47.5 kB]
+Get:46 http://ftp.hr.debian.org/debian/ unstable/main libxss1 sparc 1:1.2.1-2 [15.9 kB]
+Get:47 http://ftp.hr.debian.org/debian/ unstable/main libxt6 sparc 1:1.1.1-2 [184 kB]
+Get:48 http://ftp.hr.debian.org/debian/ unstable/main bsdmainutils sparc 9.0.1 [205 kB]
+Get:49 http://ftp.hr.debian.org/debian/ unstable/main groff-base sparc 1.21-7 [1123 kB]
+Get:50 http://ftp.hr.debian.org/debian/ unstable/main man-db sparc 2.6.1-2 [1031 kB]
+Get:51 http://ftp.hr.debian.org/debian/ unstable/main g++-4.6 sparc 4.6.3-3 [5546 kB]
+Get:52 http://ftp.hr.debian.org/debian/ unstable/main libstdc++6-4.6-dev sparc 4.6.3-3 [1660 kB]
+Get:53 http://ftp.hr.debian.org/debian/ unstable/main gcc-4.6 sparc 4.6.3-3 [3723 kB]
+Get:54 http://ftp.hr.debian.org/debian/ unstable/main cpp-4.6 sparc 4.6.3-3 [3539 kB]
+Get:55 http://ftp.hr.debian.org/debian/ unstable/main gcc-4.6-base sparc 4.6.3-3 [140 kB]
+Get:56 http://ftp.hr.debian.org/debian/ unstable/main file sparc 5.11-1 [52.7 kB]
+Get:57 http://ftp.hr.debian.org/debian/ unstable/main gettext-base sparc 0.18.1.1-5 [140 kB]
+Get:58 http://ftp.hr.debian.org/debian/ unstable/main cdbs all 0.4.109 [79.4 kB]
+Get:59 http://ftp.hr.debian.org/debian/ unstable/main html2text sparc 1.3.2a-15 [100 kB]
+Get:60 http://ftp.hr.debian.org/debian/ unstable/main gettext sparc 0.18.1.1-5 [1983 kB]
+Get:61 http://ftp.hr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:62 http://ftp.hr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:63 http://ftp.hr.debian.org/debian/ unstable/main debhelper all 9.20120410 [694 kB]
+Get:64 http://ftp.hr.debian.org/debian/ unstable/main dpatch all 2.0.35 [95.2 kB]
+Get:65 http://ftp.hr.debian.org/debian/ unstable/main gfortran-4.6 sparc 4.6.3-3 [4152 kB]
+Get:66 http://ftp.hr.debian.org/debian/ unstable/main gfortran sparc 4:4.6.3-4 [1134 B]
+Get:67 http://ftp.hr.debian.org/debian/ unstable/main libblas3gf sparc 1.2.20110419-2 [188 kB]
+Get:68 http://ftp.hr.debian.org/debian/ unstable/main libblas-dev sparc 1.2.20110419-2 [200 kB]
+Get:69 http://ftp.hr.debian.org/debian/ unstable/main libbz2-dev sparc 1.0.6-1 [36.0 kB]
+Get:70 http://ftp.hr.debian.org/debian/ unstable/main libjpeg8-dev sparc 8d-1 [243 kB]
+Get:71 http://ftp.hr.debian.org/debian/ unstable/main liblapack3gf sparc 3.3.1-1 [3975 kB]
+Get:72 http://ftp.hr.debian.org/debian/ unstable/main liblapack-dev sparc 3.3.1-1 [4389 kB]
+Get:73 http://ftp.hr.debian.org/debian/ unstable/main libtinfo-dev sparc 5.9-6 [97.8 kB]
+Get:74 http://ftp.hr.debian.org/debian/ unstable/main libncurses5-dev sparc 5.9-6 [386 kB]
+Get:75 http://ftp.hr.debian.org/debian/ unstable/main libpaper1 sparc 1.1.24+nmu1 [21.1 kB]
+Get:76 http://ftp.hr.debian.org/debian/ unstable/main libpaper-utils sparc 1.1.24+nmu1 [17.9 kB]
+Get:77 http://ftp.hr.debian.org/debian/ unstable/main libpcre3-dev sparc 1:8.30-4 [353 kB]
+Get:78 http://ftp.hr.debian.org/debian/ unstable/main zlib1g-dev sparc 1:1.2.6.dfsg-2 [209 kB]
+Get:79 http://ftp.hr.debian.org/debian/ unstable/main libpng12-dev sparc 1.2.49-1 [263 kB]
+Get:80 http://ftp.hr.debian.org/debian/ unstable/main libreadline6-dev sparc 6.2-8 [258 kB]
+Get:81 http://ftp.hr.debian.org/debian/ unstable/main libreadline-dev sparc 6.2-8 [892 B]
+Get:82 http://ftp.hr.debian.org/debian/ unstable/main zip sparc 3.0-4 [335 kB]
+Get:83 http://ftp.hr.debian.org/debian/ unstable/main unzip sparc 6.0-6 [191 kB]
+Get:84 http://ftp.hr.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:85 http://ftp.hr.debian.org/debian/ unstable/main tcl8.5 sparc 8.5.11-1 [1579 kB]
+Get:86 http://ftp.hr.debian.org/debian/ unstable/main tk8.5 sparc 8.5.11-1 [1122 kB]
+Get:87 http://ftp.hr.debian.org/debian/ unstable/main r-base-core sparc 2.15.0-1 [20.4 MB]
+Get:88 http://ftp.hr.debian.org/debian/ unstable/main r-base-dev all 2.15.0-1 [3900 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 55.1 MB in 32s (1698 kB/s)
-Selecting previously unselected package libpipeline1.
-(Reading database ... 11074 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_sparc.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.10-1_sparc.deb) ...
-Selecting previously unselected package libpcre3.
-Unpacking libpcre3 (from .../libpcre3_8.12-4_sparc.deb) ...
-Selecting previously unselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_sparc.deb) ...
-Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_sparc.deb) ...
+Fetched 71.6 MB in 39s (1808 kB/s)
+(Reading database ... 11147 files and directories currently installed.)
+Preparing to replace ncurses-bin 5.9-5 (using .../ncurses-bin_5.9-6_sparc.deb) ...
+Unpacking replacement ncurses-bin ...
+Setting up ncurses-bin (5.9-6) ...
+(Reading database ... 11147 files and directories currently installed.)
+Preparing to replace libgomp1:sparc 4.7.0-1 (using .../libgomp1_4.7.0-2_sparc.deb) ...
+Unpacking replacement libgomp1:sparc ...
+Preparing to replace gcc-4.7-base:sparc 4.7.0-1 (using .../gcc-4.7-base_4.7.0-2_sparc.deb) ...
+Unpacking replacement gcc-4.7-base:sparc ...
+Setting up gcc-4.7-base:sparc (4.7.0-2) ...
+(Reading database ... 11147 files and directories currently installed.)
+Preparing to replace libstdc++6:sparc 4.7.0-1 (using .../libstdc++6_4.7.0-2_sparc.deb) ...
+Unpacking replacement libstdc++6:sparc ...
+Setting up libstdc++6:sparc (4.7.0-2) ...
+(Reading database ... 11147 files and directories currently installed.)
+Preparing to replace libgcc1:sparc 1:4.7.0-1 (using .../libgcc1_1%3a4.7.0-2_sparc.deb) ...
+Unpacking replacement libgcc1:sparc ...
+Setting up libgcc1:sparc (1:4.7.0-2) ...
+(Reading database ... 11147 files and directories currently installed.)
+Preparing to replace libtinfo5:sparc 5.9-5 (using .../libtinfo5_5.9-6_sparc.deb) ...
+Unpacking replacement libtinfo5:sparc ...
+Setting up libtinfo5:sparc (5.9-6) ...
+(Reading database ... 11147 files and directories currently installed.)
+Preparing to replace libncurses5:sparc 5.9-5 (using .../libncurses5_5.9-6_sparc.deb) ...
+Unpacking replacement libncurses5:sparc ...
+Setting up libncurses5:sparc (5.9-6) ...
+Selecting previously unselected package libpipeline1:sparc.
+(Reading database ... 11147 files and directories currently installed.)
+Unpacking libpipeline1:sparc (from .../libpipeline1_1.2.1-1_sparc.deb) ...
+Selecting previously unselected package libmagic1:sparc.
+Unpacking libmagic1:sparc (from .../libmagic1_5.11-1_sparc.deb) ...
+Selecting previously unselected package libpcre3:sparc.
+Unpacking libpcre3:sparc (from .../libpcre3_1%3a8.30-4_sparc.deb) ...
+Selecting previously unselected package libexpat1:sparc.
+Unpacking libexpat1:sparc (from .../libexpat1_2.1.0-1_sparc.deb) ...
+Selecting previously unselected package libfreetype6:sparc.
+Unpacking libfreetype6:sparc (from .../libfreetype6_2.4.9-1_sparc.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3.1_all.deb) ...
-Selecting previously unselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_sparc.deb) ...
-Selecting previously unselected package libpixman-1-0.
-Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_sparc.deb) ...
-Selecting previously unselected package libpng12-0.
-Unpacking libpng12-0 (from .../libpng12-0_1.2.47-1_sparc.deb) ...
-Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_sparc.deb) ...
-Selecting previously unselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_sparc.deb) ...
-Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.8-2_sparc.deb) ...
+Selecting previously unselected package libfontconfig1:sparc.
+Unpacking libfontconfig1:sparc (from .../libfontconfig1_2.8.0-3.1_sparc.deb) ...
+Selecting previously unselected package libpixman-1-0:sparc.
+Unpacking libpixman-1-0:sparc (from .../libpixman-1-0_0.24.4-1_sparc.deb) ...
+Selecting previously unselected package libpng12-0:sparc.
+Unpacking libpng12-0:sparc (from .../libpng12-0_1.2.49-1_sparc.deb) ...
+Selecting previously unselected package libxau6:sparc.
+Unpacking libxau6:sparc (from .../libxau6_1%3a1.0.7-1_sparc.deb) ...
+Selecting previously unselected package libxdmcp6:sparc.
+Unpacking libxdmcp6:sparc (from .../libxdmcp6_1%3a1.1.0-4_sparc.deb) ...
+Selecting previously unselected package libxcb1:sparc.
+Unpacking libxcb1:sparc (from .../libxcb1_1.8.1-1_sparc.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
-Selecting previously unselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_sparc.deb) ...
-Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_sparc.deb) ...
-Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_sparc.deb) ...
-Selecting previously unselected package libxrender1.
-Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_sparc.deb) ...
-Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-7_sparc.deb) ...
-Selecting previously unselected package libffi5.
-Unpacking libffi5 (from .../libffi5_3.0.10-3_sparc.deb) ...
-Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_sparc.deb) ...
+Selecting previously unselected package libx11-6:sparc.
+Unpacking libx11-6:sparc (from .../libx11-6_2%3a1.4.4-4_sparc.deb) ...
+Selecting previously unselected package libxcb-render0:sparc.
+Unpacking libxcb-render0:sparc (from .../libxcb-render0_1.8.1-1_sparc.deb) ...
+Selecting previously unselected package libxcb-shm0:sparc.
+Unpacking libxcb-shm0:sparc (from .../libxcb-shm0_1.8.1-1_sparc.deb) ...
+Selecting previously unselected package libxrender1:sparc.
+Unpacking libxrender1:sparc (from .../libxrender1_1%3a0.9.6-2_sparc.deb) ...
+Selecting previously unselected package libcairo2:sparc.
+Unpacking libcairo2:sparc (from .../libcairo2_1.12.0-2_sparc.deb) ...
+Selecting previously unselected package libffi5:sparc.
+Unpacking libffi5:sparc (from .../libffi5_3.0.10-3_sparc.deb) ...
+Selecting previously unselected package libglib2.0-0:sparc.
+Unpacking libglib2.0-0:sparc (from .../libglib2.0-0_2.32.0-4_sparc.deb) ...
Selecting previously unselected package libxml2.
Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_sparc.deb) ...
-Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.4-2_sparc.deb) ...
-Selecting previously unselected package libdatrie1.
-Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_sparc.deb) ...
-Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_sparc.deb) ...
+Selecting previously unselected package libcroco3:sparc.
+Unpacking libcroco3:sparc (from .../libcroco3_0.6.5-1_sparc.deb) ...
+Selecting previously unselected package libdatrie1:sparc.
+Unpacking libdatrie1:sparc (from .../libdatrie1_0.2.5-3_sparc.deb) ...
+Selecting previously unselected package libgfortran3:sparc.
+Unpacking libgfortran3:sparc (from .../libgfortran3_4.7.0-2_sparc.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
-Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_sparc.deb) ...
-Selecting previously unselected package libjpeg8.
-Unpacking libjpeg8 (from .../libjpeg8_8d-1_sparc.deb) ...
+Selecting previously unselected package libice6:sparc.
+Unpacking libice6:sparc (from .../libice6_2%3a1.0.8-2_sparc.deb) ...
+Selecting previously unselected package libjpeg8:sparc.
+Unpacking libjpeg8:sparc (from .../libjpeg8_8d-1_sparc.deb) ...
Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.17-1_all.deb) ...
-Selecting previously unselected package libthai0.
-Unpacking libthai0 (from .../libthai0_0.1.17-1_sparc.deb) ...
-Selecting previously unselected package libxft2.
-Unpacking libxft2 (from .../libxft2_2.2.0-3_sparc.deb) ...
+Selecting previously unselected package libthai0:sparc.
+Unpacking libthai0:sparc (from .../libthai0_0.1.17-1_sparc.deb) ...
+Selecting previously unselected package libxft2:sparc.
+Unpacking libxft2:sparc (from .../libxft2_2.2.0-3_sparc.deb) ...
Selecting previously unselected package fontconfig.
Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_sparc.deb) ...
-Selecting previously unselected package libpango1.0-0.
-Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_sparc.deb) ...
-Selecting previously unselected package libpcrecpp0.
-Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_sparc.deb) ...
-Selecting previously unselected package libsm6.
-Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_sparc.deb) ...
-Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.6-1_sparc.deb) ...
-Selecting previously unselected package libunistring0.
-Unpacking libunistring0 (from .../libunistring0_0.9.3-5_sparc.deb) ...
-Selecting previously unselected package libxext6.
-Unpacking libxext6 (from .../libxext6_2%3a1.3.0-3_sparc.deb) ...
-Selecting previously unselected package libxss1.
-Unpacking libxss1 (from .../libxss1_1%3a1.2.1-2_sparc.deb) ...
-Selecting previously unselected package libxt6.
-Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_sparc.deb) ...
+Selecting previously unselected package libpango1.0-0:sparc.
+Unpacking libpango1.0-0:sparc (from .../libpango1.0-0_1.30.0-1_sparc.deb) ...
+Selecting previously unselected package libpcrecpp0:sparc.
+Unpacking libpcrecpp0:sparc (from .../libpcrecpp0_1%3a8.30-4_sparc.deb) ...
+Selecting previously unselected package libsm6:sparc.
+Unpacking libsm6:sparc (from .../libsm6_2%3a1.2.1-2_sparc.deb) ...
+Selecting previously unselected package libtiff4:sparc.
+Unpacking libtiff4:sparc (from .../libtiff4_3.9.6-2_sparc.deb) ...
+Selecting previously unselected package libunistring0:sparc.
+Unpacking libunistring0:sparc (from .../libunistring0_0.9.3-5_sparc.deb) ...
+Selecting previously unselected package libxext6:sparc.
+Unpacking libxext6:sparc (from .../libxext6_2%3a1.3.0-3_sparc.deb) ...
+Selecting previously unselected package libxss1:sparc.
+Unpacking libxss1:sparc (from .../libxss1_1%3a1.2.1-2_sparc.deb) ...
+Selecting previously unselected package libxt6:sparc.
+Unpacking libxt6:sparc (from .../libxt6_1%3a1.1.1-2_sparc.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.1_sparc.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.21-6_sparc.deb) ...
+Unpacking groff-base (from .../groff-base_1.21-7_sparc.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.1-1_sparc.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-2_sparc.deb) ...
+Preparing to replace g++-4.6 4.6.3-1 (using .../g++-4.6_4.6.3-3_sparc.deb) ...
+Unpacking replacement g++-4.6 ...
+Preparing to replace libstdc++6-4.6-dev 4.6.3-1 (using .../libstdc++6-4.6-dev_4.6.3-3_sparc.deb) ...
+Unpacking replacement libstdc++6-4.6-dev ...
+Preparing to replace gcc-4.6 4.6.3-1 (using .../gcc-4.6_4.6.3-3_sparc.deb) ...
+Unpacking replacement gcc-4.6 ...
+Preparing to replace cpp-4.6 4.6.3-1 (using .../cpp-4.6_4.6.3-3_sparc.deb) ...
+Unpacking replacement cpp-4.6 ...
+Preparing to replace gcc-4.6-base:sparc 4.6.3-1 (using .../gcc-4.6-base_4.6.3-3_sparc.deb) ...
+Unpacking replacement gcc-4.6-base:sparc ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.10-1_sparc.deb) ...
+Unpacking file (from .../archives/file_5.11-1_sparc.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_sparc.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.109_all.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_sparc.deb) ...
Selecting previously unselected package gettext.
@@ -388,47 +444,47 @@ Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) .
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120410_all.deb) ...
Selecting previously unselected package dpatch.
Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_sparc.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-3_sparc.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_sparc.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.3-4_sparc.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_sparc.deb) ...
Selecting previously unselected package libblas-dev.
Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-2_sparc.deb) ...
-Selecting previously unselected package libbz2-dev.
-Unpacking libbz2-dev (from .../libbz2-dev_1.0.6-1_sparc.deb) ...
-Selecting previously unselected package libjpeg8-dev.
-Unpacking libjpeg8-dev (from .../libjpeg8-dev_8d-1_sparc.deb) ...
+Selecting previously unselected package libbz2-dev:sparc.
+Unpacking libbz2-dev:sparc (from .../libbz2-dev_1.0.6-1_sparc.deb) ...
+Selecting previously unselected package libjpeg8-dev:sparc.
+Unpacking libjpeg8-dev:sparc (from .../libjpeg8-dev_8d-1_sparc.deb) ...
Selecting previously unselected package liblapack3gf.
Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_sparc.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_sparc.deb) ...
-Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_sparc.deb) ...
+Selecting previously unselected package libtinfo-dev:sparc.
+Unpacking libtinfo-dev:sparc (from .../libtinfo-dev_5.9-6_sparc.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_sparc.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-6_sparc.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_sparc.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_sparc.deb) ...
Selecting previously unselected package libpcre3-dev.
-Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_sparc.deb) ...
-Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_sparc.deb) ...
+Unpacking libpcre3-dev (from .../libpcre3-dev_1%3a8.30-4_sparc.deb) ...
+Selecting previously unselected package zlib1g-dev:sparc.
+Unpacking zlib1g-dev:sparc (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_sparc.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_sparc.deb) ...
-Selecting previously unselected package libreadline6-dev.
-Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_sparc.deb) ...
-Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_sparc.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-1_sparc.deb) ...
+Selecting previously unselected package libreadline6-dev:sparc.
+Unpacking libreadline6-dev:sparc (from .../libreadline6-dev_6.2-8_sparc.deb) ...
+Selecting previously unselected package libreadline-dev:sparc.
+Unpacking libreadline-dev:sparc (from .../libreadline-dev_6.2-8_sparc.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../archives/zip_3.0-4_sparc.deb) ...
Selecting previously unselected package unzip.
-Unpacking unzip (from .../archives/unzip_6.0-5_sparc.deb) ...
+Unpacking unzip (from .../archives/unzip_6.0-6_sparc.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
@@ -436,114 +492,120 @@ Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_sparc.deb) ...
Selecting previously unselected package tk8.5.
Unpacking tk8.5 (from .../tk8.5_8.5.11-1_sparc.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.2-1_sparc.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.15.0-1_sparc.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
-Setting up libpipeline1 (1.2.1-1) ...
-Setting up libmagic1 (5.10-1) ...
-Setting up libpcre3 (8.12-4) ...
-Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.8-1) ...
+Unpacking r-base-dev (from .../r-base-dev_2.15.0-1_all.deb) ...
+Setting up libgomp1:sparc (4.7.0-2) ...
+Setting up libpipeline1:sparc (1.2.1-1) ...
+Setting up libmagic1:sparc (5.11-1) ...
+Setting up libpcre3:sparc (1:8.30-4) ...
+Setting up libexpat1:sparc (2.1.0-1) ...
+Setting up libfreetype6:sparc (2.4.9-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
Setting up fontconfig-config (2.8.0-3.1) ...
-Setting up libfontconfig1 (2.8.0-3.1) ...
-Setting up libpixman-1-0 (0.24.4-1) ...
-Setting up libpng12-0 (1.2.47-1) ...
-Setting up libxau6 (1:1.0.6-4) ...
-Setting up libxdmcp6 (1:1.1.0-4) ...
-Setting up libxcb1 (1.8-2) ...
+Setting up libfontconfig1:sparc (2.8.0-3.1) ...
+Setting up libpixman-1-0:sparc (0.24.4-1) ...
+Setting up libpng12-0:sparc (1.2.49-1) ...
+Setting up libxau6:sparc (1:1.0.7-1) ...
+Setting up libxdmcp6:sparc (1:1.1.0-4) ...
+Setting up libxcb1:sparc (1.8.1-1) ...
Setting up libx11-data (2:1.4.4-4) ...
-Setting up libx11-6 (2:1.4.4-4) ...
-Setting up libxcb-render0 (1.8-2) ...
-Setting up libxcb-shm0 (1.8-2) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-7) ...
-Setting up libffi5 (3.0.10-3) ...
-Setting up libglib2.0-0 (2.30.2-6) ...
+Setting up libx11-6:sparc (2:1.4.4-4) ...
+Setting up libxcb-render0:sparc (1.8.1-1) ...
+Setting up libxcb-shm0:sparc (1.8.1-1) ...
+Setting up libxrender1:sparc (1:0.9.6-2) ...
+Setting up libcairo2:sparc (1.12.0-2) ...
+Setting up libffi5:sparc (3.0.10-3) ...
+Setting up libglib2.0-0:sparc (2.32.0-4) ...
No schema files found: doing nothing.
Setting up libxml2 (2.7.8.dfsg-7) ...
-Setting up libcroco3 (0.6.4-2) ...
-Setting up libdatrie1 (0.2.5-3) ...
-Setting up libgfortran3 (4.6.3-1) ...
+Setting up libcroco3:sparc (0.6.5-1) ...
+Setting up libdatrie1:sparc (0.2.5-3) ...
+Setting up libgfortran3:sparc (4.7.0-2) ...
Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
-Setting up libice6 (2:1.0.7-2) ...
-Setting up libjpeg8 (8d-1) ...
+Setting up libice6:sparc (2:1.0.8-2) ...
+Setting up libjpeg8:sparc (8d-1) ...
Setting up libthai-data (0.1.17-1) ...
-Setting up libthai0 (0.1.17-1) ...
-Setting up libxft2 (2.2.0-3) ...
+Setting up libthai0:sparc (0.1.17-1) ...
+Setting up libxft2:sparc (2.2.0-3) ...
Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
-Setting up libpango1.0-0 (1.29.4-2) ...
-Setting up libpcrecpp0 (8.12-4) ...
-Setting up libsm6 (2:1.2.0-2) ...
-Setting up libtiff4 (3.9.6-1) ...
-Setting up libunistring0 (0.9.3-5) ...
-Setting up libxext6 (2:1.3.0-3) ...
-Setting up libxss1 (1:1.2.1-2) ...
-Setting up libxt6 (1:1.1.1-2) ...
+Setting up libpango1.0-0:sparc (1.30.0-1) ...
+Setting up libpcrecpp0:sparc (1:8.30-4) ...
+Setting up libsm6:sparc (2:1.2.1-2) ...
+Setting up libtiff4:sparc (3.9.6-2) ...
+Setting up libunistring0:sparc (0.9.3-5) ...
+Setting up libxext6:sparc (2:1.3.0-3) ...
+Setting up libxss1:sparc (1:1.2.1-2) ...
+Setting up libxt6:sparc (1:1.1.1-2) ...
Setting up bsdmainutils (9.0.1) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode.
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode.
-Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.1-1) ...
+Setting up groff-base (1.21-7) ...
+Setting up man-db (2.6.1-2) ...
Building database of manual pages ...
-Setting up file (5.10-1) ...
+Setting up gcc-4.6-base:sparc (4.6.3-3) ...
+Setting up cpp-4.6 (4.6.3-3) ...
+Setting up gcc-4.6 (4.6.3-3) ...
+Setting up file (5.11-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.105) ...
+Setting up cdbs (0.4.109) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20120115) ...
+Setting up debhelper (9.20120410) ...
Setting up dpatch (2.0.35) ...
-Setting up gfortran-4.6 (4.6.3-1) ...
-Setting up gfortran (4:4.6.2-4) ...
+Setting up gfortran-4.6 (4.6.3-3) ...
+Setting up gfortran (4:4.6.3-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
Setting up libblas-dev (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.6-1) ...
-Setting up libjpeg8-dev (8d-1) ...
+Setting up libbz2-dev:sparc (1.0.6-1) ...
+Setting up libjpeg8-dev:sparc (8d-1) ...
Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-4) ...
-Setting up libncurses5-dev (5.9-4) ...
+Setting up libtinfo-dev:sparc (5.9-6) ...
+Setting up libncurses5-dev (5.9-6) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
-Setting up libpcre3-dev (8.12-4) ...
-Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
-Setting up libpng12-dev (1.2.47-1) ...
-Setting up libreadline6-dev (6.2-8) ...
-Setting up libreadline-dev (6.2-8) ...
+Setting up libpcre3-dev (1:8.30-4) ...
+Setting up zlib1g-dev:sparc (1:1.2.6.dfsg-2) ...
+Setting up libpng12-dev (1.2.49-1) ...
+Setting up libreadline6-dev:sparc (6.2-8) ...
+Setting up libreadline-dev:sparc (6.2-8) ...
Setting up zip (3.0-4) ...
-Setting up unzip (6.0-5) ...
+Setting up unzip (6.0-6) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.2-1) ...
+Setting up r-base-core (2.15.0-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.2-1) ...
+Setting up r-base-dev (2.15.0-1) ...
+Setting up g++-4.6 (4.6.3-3) ...
+Setting up libstdc++6-4.6-dev (4.6.3-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 5 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-sparc64-smp sparc (sparc64)
-Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.6-1
-Package versions: apt_0.8.15.9 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-3 gpgv_1.4.12-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-2 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libc6-dev-sparc64_2.13-27 libc6-sparc64_2.13-27 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libncurses5-dev_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-1 libsm6_2:1.2.0-2 libss2_1.42.1-2 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.6-1 login_1:4.1.5-1 lsb-base_3.2+Debian29 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
+Toolchain package versions: binutils_2.22-6 dpkg-dev_1.16.2 g++-4.6_4.6.3-3 gcc-4.6_4.6.3-3 libc6-dev_2.13-27 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-3 linux-libc-dev_3.2.13-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-2 binutils_2.22-6 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.109 coreutils_8.13-3.1 cpp_4:4.6.3-4 cpp-4.6_4.6.3-3 dash_0.5.7-3 debconf_1.5.42 debfoster_2.7-1.1 debhelper_9.20120410 debian-archive-keyring_2010.08.28 debianutils_4.3 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.2 dpkg-dev_1.16.2 e2fslibs_1.42.2-1 e2fsprogs_1.42.2-1 fakeroot_1.18.2-1 file_5.11-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.3-4 g++-4.6_4.6.3-3 gcc_4:4.6.3-4 gcc-4.6_4.6.3-3 gcc-4.6-base_4.6.3-3 gcc-4.7-base_4.7.0-2 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.3-4 gfortran-4.6_4.6.3-3 gnupg_1.4.12-4 gpgv_1.4.12-4 grep_2.10-1 groff-base_1.21-7 gzip_1.4-5 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22.1 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libc6-dev-sparc64_2.13-27 libc6-sparc64_2.13-27 libcairo2_1.12.0-2 libclass-isa-perl_0.36-3 libcomerr2_1.42.2-1 libcroco3_0.6.5-1 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.2 libexpat1_2.1.0-1 libffi5_3.0.10-3 libfile-fcntllock-perl_0.14-1+b1 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.9-1 libgc1c2_1:7.1-8 libgcc1_1:4.7.0-2 libgdbm3_1.8.3-10 libgfortran3_4.7.0-2 libglib2.0-0_2.32.0-4 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.7.0-2 libice6_2:1.0.8-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.11-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-6 libncurses5-dev_5.9-6 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.30.0-1 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_1:8.30-4 libpcre3-dev_1:8.30-4 libpcrecpp0_1:8.30-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.49-1 libpng12-dev_1.2.49-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-4 libsemanage-common_2.1.6-5 libsemanage1_2.1.6-5 libsepol1_2.1.4-3 libsm6_2:1.2.1-2 libss2_1.42.2-1 libstdc++6_4.7.0-2 libstdc++6-4.6-dev_4.6.3-3 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-6 libtinfo5_5.9-6 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.7-1 libxcb-render0_1.8.1-1 libxcb-shm0_1.8.1-1 libxcb1_1.8.1-1 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.13-1 login_1:4.1.5-1 lsb-base_4.1+Debian0 make_3.81-8.1 man-db_2.6.1-2 mawk_1.3.3-17 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-5 ncurses-bin_5.9-6 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.15.0-1 r-base-dev_2.15.0-1 readline-common_6.2-8 sed_4.2.1-9 sensible-utils_0.0.6 sudo_1.8.3p2-1 sysv-rc_2.88dsf-22.1 sysvinit_2.88dsf-22.1 sysvinit-utils_2.88dsf-22.1 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-6 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -554,12 +616,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Wed Mar 7 04:21:28 2012 UTC using RSA key ID 2295D502
+gpgv: Signature made Thu Apr 12 02:45:32 2012 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.10.3-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
-dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.12.0~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.12.0~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.12.0~dfsg.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.12.0~dfsg-1.diff.gz
Check disc space
────────────────
@@ -569,18 +631,18 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.3-1
- dpkg-source --before-build r-bioc-limma-3.10.3
+dpkg-buildpackage: source version 3.12.0~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: host architecture sparc
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
dh_testroot
/usr/bin/make -f debian/rules reverse-config
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg'
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg'
if [ "reverse-patches" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "reverse-patches" != "reverse-patches" ]; then touch debian/stamp-patched; fi
@@ -609,25 +671,25 @@ if test -d src; then \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build
+ debian/rules build-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
mkdir -p "."
/usr/bin/make -f debian/rules reverse-config
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
make[1]: Nothing to be done for `reverse-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg'
if [ "debian/stamp-patched" = "reverse-patches" ]; then rm -f debian/stamp-patched; fi
patches:
if [ "debian/stamp-patched" != "reverse-patches" ]; then touch debian/stamp-patched; fi
if [ "debian/stamp-patched" != "reverse-patches" ] ; then \
/usr/bin/make -f debian/rules update-config ; \
fi
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg'
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3'
make[1]: Nothing to be done for `update-config'.
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg'
fakeroot debian/rules binary-arch
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -641,44 +703,44 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 2.15.0-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/src'
-gcc -std=gnu99 -I/usr/share/R/include -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/src'
-installing to /build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
-** building package indices ...
-*** tangling vignette sources ...
+** building package indices
+** installing vignettes
'limma.Rnw'
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -717,7 +779,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
- cd '/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi/r-bioc-limma-3.10.3'
+ cd '/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP/r-bioc-limma-3.12.0~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -742,27 +804,27 @@ dh_gencontrol -pr-bioc-limma
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
- (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_sparc.deb'.
- dpkg-genchanges -B -msparc Build Daemon (schroeder) <buildd_sparc-schroeder at buildd.debian.org> >../r-bioc-limma_3.10.3-1_sparc.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.12.0~dfsg-1_sparc.deb'.
+ dpkg-genchanges -B -msparc Build Daemon (schroeder) <buildd_sparc-schroeder at buildd.debian.org> >../r-bioc-limma_3.12.0~dfsg-1_sparc.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.10.3
+ dpkg-source --after-build r-bioc-limma-3.12.0~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20120307-0459
+Build finished at 20120412-0337
-r-bioc-limma_3.10.3-1_sparc.changes:
+r-bioc-limma_3.12.0~dfsg-1_sparc.changes:
Format: 1.8
-Date: Wed, 07 Mar 2012 13:13:47 +0900
+Date: Thu, 12 Apr 2012 11:40:40 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: sparc
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
Distribution: sid
Urgency: low
Maintainer: sparc Build Daemon (schroeder) <buildd_sparc-schroeder at buildd.debian.org>
@@ -770,44 +832,39 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.3-1) unstable; urgency=low
- .
- 0ddb00d New Upstream version.
- .
- [ Carlos Borroto ]
- afe6f31 Fix for watch file.
+ r-bioc-limma (3.12.0~dfsg-1) unstable; urgency=low
.
[ Charles Plessy ]
- 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
- 4713d97 Obtain ${R:Depends} through r-base-dev.
- 756a1da Conforms to Policy 3.9.3.
- 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
- 2db0d3d Verbose Debhelper.
+ 2d3420e Imported Upstream version 3.12.0~dfsg
+ 4bbb8e4 Document LIMMA's copyright as a whole.
+ .
+ [ Andreas Tille ]
+ 8a61a4c Obtain references from inst/CITATION
Checksums-Sha1:
- 6be130454f073221ac457a7b67be917fcf3bcd7d 1474484 r-bioc-limma_3.10.3-1_sparc.deb
+ 2b6e2351bf3b1e03b660649ec5c47f1c0ed2ca1c 808474 r-bioc-limma_3.12.0~dfsg-1_sparc.deb
Checksums-Sha256:
- 1f7fb04dfd31cd506933b122ca88376f5e6dfa5797c8c81407c3e61a43dfd819 1474484 r-bioc-limma_3.10.3-1_sparc.deb
+ 99b52f4aac04bfb89e7069dcaa7ccc76113e73fa91ca4d56a9666603d675fa82 808474 r-bioc-limma_3.12.0~dfsg-1_sparc.deb
Files:
- 1d069de1ad8434f09d3e61d4f8aa62fe 1474484 gnu-r optional r-bioc-limma_3.10.3-1_sparc.deb
+ a093cceedc93b19715a1f0608f8cb0a2 808474 gnu-r optional r-bioc-limma_3.12.0~dfsg-1_sparc.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.3-1_sparc.deb
-───────────────────────────────
+r-bioc-limma_3.12.0~dfsg-1_sparc.deb
+────────────────────────────────────
new debian package, version 2.0.
- size 1474484 bytes: control archive= 1565 bytes.
- 769 bytes, 16 lines control
- 2372 bytes, 31 lines md5sums
+ size 808474 bytes: control archive= 1540 bytes.
+ 773 bytes, 16 lines control
+ 2290 bytes, 30 lines md5sums
Package: r-bioc-limma
- Version: 3.10.3-1
+ Version: 3.12.0~dfsg-1
Architecture: sparc
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1678
- Depends: libc6 (>= 2.6), r-base-core (>= 2.14.2-1)
+ Installed-Size: 982
+ Depends: libc6 (>= 2.6), r-base-core (>= 2.15.0-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -819,52 +876,51 @@ r-bioc-limma_3.10.3-1_sparc.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/share/
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/share/doc/
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 27284 2012-03-03 02:22 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 2302 2012-03-07 04:58 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 264 2012-03-07 04:58 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 560 2012-03-07 04:58 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
-drwxr-xr-x root/root 0 2012-03-07 04:58 ./usr/lib/
-drwxr-xr-x root/root 0 2012-03-07 04:58 ./usr/lib/R/
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 9458 2012-03-07 04:59 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2012-03-07 04:59 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 34556 2012-03-07 04:59 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1901 2012-03-07 04:58 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 6221 2012-03-07 04:59 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 3263 2012-03-07 04:59 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 458053 2012-03-07 04:59 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 1348 2012-03-07 04:59 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 2392 2012-03-07 04:59 ./usr/lib/R/site-library/limma/help/aliases.rds
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 89361 2012-03-07 04:59 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 737677 2012-03-07 04:59 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rwxr-xr-x root/root 1711 2012-03-07 04:59 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rwxr-xr-x root/root 673 2012-03-07 04:59 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 42743 2012-03-07 04:59 ./usr/lib/R/site-library/limma/doc/limma.pdf
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 6022 2012-03-07 04:59 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5603 2012-03-07 04:59 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 216 2012-03-07 04:59 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 518 2012-03-07 04:59 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 2886 2012-03-07 04:59 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 1052 2012-03-07 04:58 ./usr/lib/R/site-library/limma/Meta/package.rds
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 3768 2012-03-07 04:59 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 198251 2012-03-07 04:59 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 383 2012-03-07 04:59 ./usr/lib/R/site-library/limma/R/limma
--rwxr-xr-x root/root 1230 2012-03-07 04:59 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2012-03-07 04:59 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 8168 2012-03-07 04:59 ./usr/lib/R/site-library/limma/libs/limma.so
--rw-r--r-- root/root 2173 2012-03-07 04:59 ./usr/lib/R/site-library/limma/NEWS.Rd
--rw-r--r-- root/root 970 2012-03-07 04:58 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/share/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 27996 2012-03-30 22:32 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 2457 2012-04-12 03:36 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 264 2012-04-12 03:36 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 683 2012-04-12 03:36 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 9754 2012-04-12 03:37 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2012-04-12 03:37 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 35015 2012-04-12 03:37 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1901 2012-04-12 03:37 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 6317 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 3343 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 472630 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 1367 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 2431 2012-04-12 03:37 ./usr/lib/R/site-library/limma/help/aliases.rds
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 91993 2012-04-12 03:37 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rwxr-xr-x root/root 1711 2012-04-12 03:37 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rwxr-xr-x root/root 673 2012-04-12 03:37 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 42743 2012-04-12 03:37 ./usr/lib/R/site-library/limma/doc/limma.pdf
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 6157 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5727 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 220 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 521 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 2943 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 1054 2012-04-12 03:37 ./usr/lib/R/site-library/limma/Meta/package.rds
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 3831 2012-04-12 03:37 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 202045 2012-04-12 03:37 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 383 2012-04-12 03:37 ./usr/lib/R/site-library/limma/R/limma
+-rwxr-xr-x root/root 1230 2012-04-12 03:37 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2012-04-12 03:37 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 8168 2012-04-12 03:37 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 3989 2012-04-12 03:37 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 970 2012-04-12 03:37 ./usr/lib/R/site-library/limma/DESCRIPTION
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -878,7 +934,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-sparc-sbuild-07cc4502-9ed0-4b70-b5c7-f9ebce6805c4/build/buildd-r-bioc-limma_3.10.3-1-sparc-oFledi
+Purging /var/lib/schroot/mount/sid-sparc-sbuild-5ea088ab-1a75-4319-b695-fc31d0735d4d/build/buildd-r-bioc-limma_3.12.0~dfsg-1-sparc-Zs4wWP
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -886,18 +942,18 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: sparc
-Build-Space: 5328
-Build-Time: 55
+Build-Space: 3268
+Build-Time: 59
Distribution: sid
-Install-Time: 308
-Job: r-bioc-limma_3.10.3-1
+Install-Time: 207
+Job: r-bioc-limma_3.12.0~dfsg-1
Package: r-bioc-limma
-Package-Time: 440
-Source-Version: 3.10.3-1
-Space: 5328
+Package-Time: 327
+Source-Version: 3.12.0~dfsg-1
+Space: 3268
Status: successful
-Version: 3.10.3-1
+Version: 3.12.0~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20120307-0459
-Build needed 00:07:20, 5328k disc space
+Finished at 20120412-0337
+Build needed 00:05:27, 3268k disc space
Signature with key '24E4F805' requested:
--
linear models for microarray data
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