[med-svn] r12003 - in trunk/packages/circos/tags: . 0.61-2 0.61-2/debian

Olivier Sallou osallou at alioth.debian.org
Mon Aug 6 07:33:05 UTC 2012


Author: osallou
Date: 2012-08-06 07:33:04 +0000 (Mon, 06 Aug 2012)
New Revision: 12003

Added:
   trunk/packages/circos/tags/0.61-2/
   trunk/packages/circos/tags/0.61-2/debian/
   trunk/packages/circos/tags/0.61-2/debian/changelog
   trunk/packages/circos/tags/0.61-2/debian/control
   trunk/packages/circos/tags/0.61-2/debian/copyright
   trunk/packages/circos/tags/0.61-2/debian/fonts-circos-symbols.install
Removed:
   trunk/packages/circos/tags/0.61-2/debian/
   trunk/packages/circos/tags/0.61-2/debian/changelog
   trunk/packages/circos/tags/0.61-2/debian/control
   trunk/packages/circos/tags/0.61-2/debian/copyright
   trunk/packages/circos/tags/0.61-2/debian/otf-symbols-circos.install
Log:
[svn-buildpackage] Tagging circos 0.61-2

Deleted: trunk/packages/circos/tags/0.61-2/debian/changelog
===================================================================
--- trunk/packages/circos/trunk/debian/changelog	2012-08-05 21:45:29 UTC (rev 11989)
+++ trunk/packages/circos/tags/0.61-2/debian/changelog	2012-08-06 07:33:04 UTC (rev 12003)
@@ -1,24 +0,0 @@
-circos (0.61-1) unstable; urgency=low
-
-  [ Olivier Sallou ]
-  * New upstream release
-
-  [ Charles Plessy ]
-  * renamed debian/upstream-metadata.yaml to debian/upstream
-
-  [ Andreas Tille ]
-  * debian/upstream: enhanced citation information 
-
- -- Olivier Sallou <osallou at debian.org>  Thu, 14 Jun 2012 12:56:33 +0200
-
-circos (0.55-2) unstable; urgency=low
-
-  * Add pre-depends on dpkg to support xz compression (required for Ubuntu) 
-
- -- Olivier Sallou <olivier.sallou at irisa.fr>  Wed, 19 Oct 2011 14:16:18 +0200
-
-circos (0.55-1) unstable; urgency=low
-
-  * First debian import (Closes: #632174) 
-
- -- Olivier Sallou <olivier.sallou at irisa.fr>  Wed, 29 Jun 2011 12:04:57 +0200

Copied: trunk/packages/circos/tags/0.61-2/debian/changelog (from rev 11997, trunk/packages/circos/trunk/debian/changelog)
===================================================================
--- trunk/packages/circos/tags/0.61-2/debian/changelog	                        (rev 0)
+++ trunk/packages/circos/tags/0.61-2/debian/changelog	2012-08-06 07:33:04 UTC (rev 12003)
@@ -0,0 +1,35 @@
+circos (0.61-2) unstable; urgency=low
+
+  [ Olivier Sallou ]
+  * debian/control:
+    - Update description (Closes: #682802).
+    - Rename otf-symbols-circos to fonts-circos-symbols to fit the Font
+     Packages Naming Policy.
+    - Move to Standards 3.9.3
+
+ -- Olivier Sallou <osallou at debian.org>  Thu, 14 Jun 2012 13:46:15 +0200
+
+circos (0.61-1) unstable; urgency=low
+
+  [ Olivier Sallou ]
+  * New upstream release
+
+  [ Charles Plessy ]
+  * renamed debian/upstream-metadata.yaml to debian/upstream
+
+  [ Andreas Tille ]
+  * debian/upstream: enhanced citation information 
+
+ -- Olivier Sallou <osallou at debian.org>  Thu, 14 Jun 2012 12:56:33 +0200
+
+circos (0.55-2) unstable; urgency=low
+
+  * Add pre-depends on dpkg to support xz compression (required for Ubuntu) 
+
+ -- Olivier Sallou <olivier.sallou at irisa.fr>  Wed, 19 Oct 2011 14:16:18 +0200
+
+circos (0.55-1) unstable; urgency=low
+
+  * First debian import (Closes: #632174) 
+
+ -- Olivier Sallou <olivier.sallou at irisa.fr>  Wed, 29 Jun 2011 12:04:57 +0200

Deleted: trunk/packages/circos/tags/0.61-2/debian/control
===================================================================
--- trunk/packages/circos/trunk/debian/control	2012-08-05 21:45:29 UTC (rev 11989)
+++ trunk/packages/circos/tags/0.61-2/debian/control	2012-08-06 07:33:04 UTC (rev 12003)
@@ -1,41 +0,0 @@
-Source: circos
-Section: science
-Priority: optional
-Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Olivier Sallou <olivier.sallou at irisa.fr>,
-DM-Upload-Allowed: yes
-Build-Depends: debhelper (>= 8.0.0)
-Standards-Version: 3.9.2
-Homepage: http://circos.ca/
-Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/circos/trunk/
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/circos/
-
-Package: circos
-Architecture: all
-Pre-Depends: dpkg (>= 1.15.6)
-Depends: ${misc:Depends}, ${perl:Depends}, perl (>= 5.10), otf-symbols-circos, fonts-cmu,
- libregexp-common-perl, libcarp-always-perl, libconfig-general-perl (>= 2.5),
- libdata-dumper-simple-perl, libgd-gd2-perl, libgetopt-simple-perl,
- libmath-bezier-perl, libmath-round-perl, libparams-validate-perl, libreadonly-perl,
- libset-intspan-perl (>= 1.16), liblist-allutils-perl, libfile-basedir-perl,libfile-spec-perl,
- libmath-bigint-perl,libmath-vec-perl, libio-all-perl, libmath-vecstat-perl, libgraphics-colorobject-perl,
- libtext-format-perl, libfont-ttf-perl
-Recommends: circos-tools
-Description: Package for visualizing data and information
- Circos visualizes data in a circular layout — this makes Circos 
- ideal for exploring relationships between objects or positions.
- Circos is ideal for creating publication-quality infographics 
- and illustrations with a high data-to-ink ratio, richly layered
-  data and pleasant symmetries. You have fine control each element
- in the figure to tailor its focus points and detail to your audience.
-
-Package: otf-symbols-circos
-Section: fonts
-Architecture: all
-Pre-Depends: dpkg (>= 1.15.6)
-Depends: ${misc:Depends}
-Description: Fonts used by default in Circos
- Circos visualizes data in a circular layout — this makes Circos
- ideal for exploring relationships between objects or positions.
- .
- This package contains a set of font usedby default with Circos.

Copied: trunk/packages/circos/tags/0.61-2/debian/control (from rev 11996, trunk/packages/circos/trunk/debian/control)
===================================================================
--- trunk/packages/circos/tags/0.61-2/debian/control	                        (rev 0)
+++ trunk/packages/circos/tags/0.61-2/debian/control	2012-08-06 07:33:04 UTC (rev 12003)
@@ -0,0 +1,55 @@
+Source: circos
+Section: science
+Priority: optional
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Olivier Sallou <osallou at debian.org>,
+DM-Upload-Allowed: yes
+Build-Depends: debhelper (>= 8.0.0)
+Standards-Version: 3.9.3
+Homepage: http://circos.ca/
+Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/circos/trunk/
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/circos/
+
+Package: circos
+Architecture: all
+Pre-Depends: dpkg (>= 1.15.6)
+Depends: ${misc:Depends}, ${perl:Depends}, perl (>= 5.10), fonts-circos-symbols, fonts-cmu,
+ libregexp-common-perl, libcarp-always-perl, libconfig-general-perl (>= 2.5),
+ libdata-dumper-simple-perl, libgd-gd2-perl, libgetopt-simple-perl,
+ libmath-bezier-perl, libmath-round-perl, libparams-validate-perl, libreadonly-perl,
+ libset-intspan-perl (>= 1.16), liblist-allutils-perl, libfile-basedir-perl,libfile-spec-perl,
+ libmath-bigint-perl,libmath-vec-perl, libio-all-perl, libmath-vecstat-perl, libgraphics-colorobject-perl,
+ libtext-format-perl, libfont-ttf-perl
+Recommends: circos-tools
+Description: plotter for visualizing data
+ Circos visualizes data in a circular layout — ideal for exploring
+ relationships between objects or positions, and creating highly
+ informative publication-quality graphics.
+ .
+ This package provides the Circos plotting engine, which is command-line
+ driven (like gnuplot) and fully scriptable.
+
+Package: otf-symbols-circos
+Pre-Depends: dpkg (>= 1.15.6)
+Depends: fonts-circos-symbols, ${misc:Depends}
+Architecture: all
+Section: oldlibs
+Priority: extra
+Description: transitional dummy package
+ This package is a dummy transitional package. It can be safely removed.
+
+
+Package: fonts-circos-symbols
+Replaces: otf-symbols-circos (<< 0.61-2)
+Conflicts: otf-symbols-circos (<< 0.61-2)
+Provides: otf-symbols-circos
+Section: fonts
+Architecture: all
+Pre-Depends: dpkg (>= 1.15.6)
+Depends: ${misc:Depends}
+Description: plotter for visualizing data - standard fonts 
+ Circos visualizes data in a circular layout — ideal for exploring
+ relationships between objects or positions, and creating highly
+ informative publication-quality graphics.
+ .
+ This package provides a set of fonts used by default with Circos.

Deleted: trunk/packages/circos/tags/0.61-2/debian/copyright
===================================================================
--- trunk/packages/circos/trunk/debian/copyright	2012-08-05 21:45:29 UTC (rev 11989)
+++ trunk/packages/circos/tags/0.61-2/debian/copyright	2012-08-06 07:33:04 UTC (rev 12003)
@@ -1,107 +0,0 @@
-Format: http://anonscm.debian.org/viewvc/dep/web/deps/dep5.mdwn?revision=174
-Upstream-Name: circos
-Source: http://circos.ca/distribution/circos-0.55.tgz
-
-Files: *
-Copyright: Copyright 2004-2011 Martin Krzywinski
-License: GPL-2+
-
-Files: fonts/modern/*
-Copyright: 2005, Andrey V. Panov
-License: X11 with fonts exception
- Permission is hereby granted, free of charge, to any person obtaining a
- copy of this software and associated documentation files (the
- "Software"), to deal in the Software without restriction, including
- without limitation the rights to use, copy, modify, merge, publish,
- distribute, and/or sell copies of the Software, and to permit persons to
- whom the Software is furnished to do so, provided that the above
- copyright notice(s) and this permission notice appear in all copies of
- the Software and that both the above copyright notice(s) and this
- permission notice appear in supporting documentation.
- .
- THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
- OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
- MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT OF
- THIRD PARTY RIGHTS. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR HOLDERS
- INCLUDED IN THIS NOTICE BE LIABLE FOR ANY CLAIM, OR ANY SPECIAL INDIRECT
- OR CONSEQUENTIAL DAMAGES, OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS
- OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR
- OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
- PERFORMANCE OF THIS SOFTWARE.
- .
- Except as contained in this notice, the name of a copyright holder shall
- not be used in advertising or otherwise to promote the sale, use or
- other dealings in this Software without prior written authorization of
- the copyright holder.
- .
- As a special exception, if you create a document which uses these fonts,
- and embed these fonts or unaltered portions of these fonts into the
- document, these fonts does not by itself cause the resulting document to
- be covered by the X11 License. This exception does not however
- invalidate any other reasons why the document might be covered by the
- X11 License. If you modify these fonts, you may extend this exception to
- your version of the fonts, but you are not obligated to do so. If you do
- not wish to do so, delete this exception statement from your version.
-Comment: See http://bugs.debian.org/620537
-
-Files: fonts/symbols/*
-Copyright: Copyright 2004-2011 Martin Krzywinski
-License: GPL-2+
-Comment: See etc/conts.fonf:
- # All wingding and webding fonts have been replaced
- # by a GPL glyph font designed by Martin Krzywinski
- # for Circos.
-
-Files: etc/brewer.*
-Copyright: Cynthia A. Brewer, Mark Harrower, Pennsylvania State University
-License: Apache-2.0
- Licensed under the Apache License, Version 2.0 (the "License");
- you may not use this file except in compliance with the License.
- You may obtain a copy of the License at
- .
-     http://www.apache.org/licenses/LICENSE-2.0
- .
- Unless required by applicable law or agreed to in writing, software
- distributed under the License is distributed on an "AS IS" BASIS,
- WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- See the License for the specific language governing permissions and
- limitations under the License.
-Comment: On Debian systems, the complete text of the Apache License,
- Version 2.0 can be found in ‘/usr/share/common-licenses/Apache-2.0’.
-
-Files: debian/*
-Copyright: 2011 Olivier Sallou <olivier.sallou at irisa.fr>
-License: GPL-2+
- This package is free software; you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation; either version 2 of the License, or
- (at your option) any later version.
- .
- This package is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- GNU General Public License for more details.
- .
- You should have received a copy of the GNU General Public License
- along with this program. If not, see <http://www.gnu.org/licenses/>
- .
- On Debian systems, the complete text of the GNU General
- Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
-
-License: GPL-2+
- This package is free software; you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation; either version 2 of the License, or
- (at your option) any later version.
- .
- This package is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- GNU General Public License for more details.
- .
- You should have received a copy of the GNU General Public License
- along with this program. If not, see <http://www.gnu.org/licenses/>
- .
- On Debian systems, the complete text of the GNU General
- Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
-

Copied: trunk/packages/circos/tags/0.61-2/debian/copyright (from rev 11993, trunk/packages/circos/trunk/debian/copyright)
===================================================================
--- trunk/packages/circos/tags/0.61-2/debian/copyright	                        (rev 0)
+++ trunk/packages/circos/tags/0.61-2/debian/copyright	2012-08-06 07:33:04 UTC (rev 12003)
@@ -0,0 +1,107 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: circos
+Source: http://circos.ca/distribution/circos-0.55.tgz
+
+Files: *
+Copyright: Copyright 2004-2011 Martin Krzywinski
+License: GPL-2+
+
+Files: fonts/modern/*
+Copyright: 2005, Andrey V. Panov
+License: X11 with fonts exception
+ Permission is hereby granted, free of charge, to any person obtaining a
+ copy of this software and associated documentation files (the
+ "Software"), to deal in the Software without restriction, including
+ without limitation the rights to use, copy, modify, merge, publish,
+ distribute, and/or sell copies of the Software, and to permit persons to
+ whom the Software is furnished to do so, provided that the above
+ copyright notice(s) and this permission notice appear in all copies of
+ the Software and that both the above copyright notice(s) and this
+ permission notice appear in supporting documentation.
+ .
+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
+ OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT OF
+ THIRD PARTY RIGHTS. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR HOLDERS
+ INCLUDED IN THIS NOTICE BE LIABLE FOR ANY CLAIM, OR ANY SPECIAL INDIRECT
+ OR CONSEQUENTIAL DAMAGES, OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS
+ OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR
+ OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION WITH THE USE OR
+ PERFORMANCE OF THIS SOFTWARE.
+ .
+ Except as contained in this notice, the name of a copyright holder shall
+ not be used in advertising or otherwise to promote the sale, use or
+ other dealings in this Software without prior written authorization of
+ the copyright holder.
+ .
+ As a special exception, if you create a document which uses these fonts,
+ and embed these fonts or unaltered portions of these fonts into the
+ document, these fonts does not by itself cause the resulting document to
+ be covered by the X11 License. This exception does not however
+ invalidate any other reasons why the document might be covered by the
+ X11 License. If you modify these fonts, you may extend this exception to
+ your version of the fonts, but you are not obligated to do so. If you do
+ not wish to do so, delete this exception statement from your version.
+Comment: See http://bugs.debian.org/620537
+
+Files: fonts/symbols/*
+Copyright: Copyright 2004-2011 Martin Krzywinski
+License: GPL-2+
+Comment: See etc/conts.fonf:
+ # All wingding and webding fonts have been replaced
+ # by a GPL glyph font designed by Martin Krzywinski
+ # for Circos.
+
+Files: etc/brewer.*
+Copyright: Cynthia A. Brewer, Mark Harrower, Pennsylvania State University
+License: Apache-2.0
+ Licensed under the Apache License, Version 2.0 (the "License");
+ you may not use this file except in compliance with the License.
+ You may obtain a copy of the License at
+ .
+     http://www.apache.org/licenses/LICENSE-2.0
+ .
+ Unless required by applicable law or agreed to in writing, software
+ distributed under the License is distributed on an "AS IS" BASIS,
+ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ See the License for the specific language governing permissions and
+ limitations under the License.
+Comment: On Debian systems, the complete text of the Apache License,
+ Version 2.0 can be found in ‘/usr/share/common-licenses/Apache-2.0’.
+
+Files: debian/*
+Copyright: 2011 Olivier Sallou <olivier.sallou at irisa.fr>
+License: GPL-2+
+ This package is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
+
+License: GPL-2+
+ This package is free software; you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation; either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This package is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
+

Copied: trunk/packages/circos/tags/0.61-2/debian/fonts-circos-symbols.install (from rev 11994, trunk/packages/circos/trunk/debian/fonts-circos-symbols.install)
===================================================================
--- trunk/packages/circos/tags/0.61-2/debian/fonts-circos-symbols.install	                        (rev 0)
+++ trunk/packages/circos/tags/0.61-2/debian/fonts-circos-symbols.install	2012-08-06 07:33:04 UTC (rev 12003)
@@ -0,0 +1 @@
+fonts/symbols usr/share/circos/fonts/

Deleted: trunk/packages/circos/tags/0.61-2/debian/otf-symbols-circos.install
===================================================================
--- trunk/packages/circos/trunk/debian/otf-symbols-circos.install	2012-08-05 21:45:29 UTC (rev 11989)
+++ trunk/packages/circos/tags/0.61-2/debian/otf-symbols-circos.install	2012-08-06 07:33:04 UTC (rev 12003)
@@ -1 +0,0 @@
-fonts/symbols usr/share/circos/fonts/




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