[med-svn] [SCM] cufflinks branch, master, updated. debian/1.3.0-1-2-g45b0330

[Andreas Tille]

The following commit has been merged in the master branch:
commit 45b0330498a19c9a985e07f94b8ff9060f0a60de
Author: Andreas Tille <tille at debian.org>
Date:   Sat Feb 18 18:58:35 2012 +0100

    Added references from tasks file

diff --git a/debian/changelog b/debian/changelog
index 68e4d98..46fc8d1 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -3,7 +3,10 @@ cufflinks (1.3.0-2) UNRELEASED; urgency=low
   [ Carlos Borroto ]
   * Added tophat to Enhances
 
- -- Carlos Borroto <carlos.borroto at gmail.com>  Wed, 08 Feb 2012 11:24:44 -0500
+  [ Andreas Tille ]
+  * debian/upstream: Added references as specified in tasks file
+
+ -- Andreas Tille <tille at debian.org>  Sat, 18 Feb 2012 18:57:55 +0100
 
 cufflinks (1.3.0-1) unstable; urgency=low
 
diff --git a/debian/upstream b/debian/upstream
new file mode 100644
index 0000000..d07522c
--- /dev/null
+++ b/debian/upstream
@@ -0,0 +1,10 @@
+Contact: Cole Trapnell <cole at cs.umd.edu>
+Homepage: http://cufflinks.cbcb.umd.edu/
+Name: Cufflinks
+Reference:
+  Authors: Trapnell C, Williams BA, Pertea G, Mortazavi AM, Kwan G, van Baren MJ, Salzberg SL, Wold B, Pachter L.
+  Title: Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
+  Journal: Nature Biotechnology
+  DOI: doi:10.1038/nbt.1621
+  URL: http://www.nature.com/nbt/journal/v28/n5/full/nbt.1621.html
+  Year: 2010

-- 
Transcript assembly, differential expression, and differential regulation for RNA-Seq.