[med-svn] [SCM] libbio-graphics-perl branch, meta, updated. meta/2.24-1-1-g643335f
Charles Plessy
plessy at debian.org
Mon Feb 20 04:13:41 UTC 2012
The following commit has been merged in the meta branch:
commit 643335f644294efc086fba9ac2b353cc2de833a7
Author: Charles Plessy <plessy at debian.org>
Date: Mon Feb 20 13:10:32 2012 +0900
Build logs for libbio-graphics-perl_2.26-1_amd64.changes.
diff --git a/amd64.changes b/amd64.changes
index dd1b231..807235a 100644
--- a/amd64.changes
+++ b/amd64.changes
@@ -1,56 +1,32 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA256
-
Format: 1.8
-Date: Thu, 14 Jul 2011 19:50:40 +0900
+Date: Mon, 20 Feb 2012 13:05:39 +0900
Source: libbio-graphics-perl
Binary: libbio-graphics-perl
Architecture: source all
-Version: 2.24-1
+Version: 2.26-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
libbio-graphics-perl - Generate GD images of Bio::Seq objects
+Closes: 660481
Changes:
- libbio-graphics-perl (2.24-1) unstable; urgency=low
+ libbio-graphics-perl (2.26-1) unstable; urgency=low
.
- * New usptream release.
- * Replaced deprecated ‘<’ by ‘<<’ in debian/control.
- * Renamed debian/README.Debian debian/README.test, as it only discusses tests
- * Incremented Standards-Version to reflect conformance with Policy 3.9.1
- (debian/control, no changes needed).
+ * New upstream release (Closes: #660481).
Checksums-Sha1:
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- b6e3f4686183f780ac49d36b6730ec12f80cfe54 8522 libbio-graphics-perl_2.24-1.diff.gz
- 67b506b3355b31e8e58f5d72c6918bd655f5b033 665984 libbio-graphics-perl_2.24-1_all.deb
+ a9267707c58c0f5e0f976d5955c427cf0dcccea9 1267 libbio-graphics-perl_2.26-1.dsc
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diff --git a/amd64.log b/amd64.log
index 93f8d13..b021ebd 100644
--- a/amd64.log
+++ b/amd64.log
@@ -1,18 +1,18 @@
-sbuild (Debian sbuild) 0.62.4 (25 Jun 2011) on anx191
+sbuild (Debian sbuild) 0.62.6 (07 Dec 2011) on anx191
╔══════════════════════════════════════════════════════════════════════════════╗
-║ libbio-graphics-perl 2.24-1 (amd64) 14 Jul 2011 19:57 ║
+║ libbio-graphics-perl 2.26-1 (amd64) 20 Feb 2012 13:07 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: libbio-graphics-perl
-Version: 2.24-1
-Source Version: 2.24-1
+Version: 2.26-1
+Source Version: 2.26-1
Distribution: unstable
Architecture: amd64
-I: NOTICE: Log filtering will replace 'build/libbio-graphics-perl-d4oJsj/libbio-graphics-perl-2.24' with '«PKGBUILDDIR»'
-I: NOTICE: Log filtering will replace 'build/libbio-graphics-perl-d4oJsj' with '«BUILDDIR»'
-I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-amd64-sbuild-d61436f1-759f-43af-a95a-771a878c8950' with '«CHROOT»'
+I: NOTICE: Log filtering will replace 'build/libbio-graphics-perl-Hgvo0l/libbio-graphics-perl-2.26' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/libbio-graphics-perl-Hgvo0l' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-amd64-sbuild-8ffdc859-a309-4c7c-9e84-a0b1c5ac59ed' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
@@ -21,6 +21,7 @@ I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-amd64-sbuild-d6
Hit http://ftp.jp.debian.org sid InRelease
Hit http://ftp.jp.debian.org sid/main amd64 Packages/DiffIndex
Hit http://ftp.jp.debian.org sid/main TranslationIndex
+Hit http://ftp.jp.debian.org sid/main Translation-en
Reading package lists...
Reading package lists...
Building dependency tree...
@@ -35,14 +36,14 @@ Reading state information...
Local sources
─────────────
-libbio-graphics-perl_2.24-1.dsc exists in .; copying to chroot
+libbio-graphics-perl_2.26-1.dsc exists in .; copying to chroot
Check arch
──────────
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
-dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-WliaBH/apt_archive/sbuild-build-depends-core-dummy.deb'.
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-LcCBVw/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Reading package lists...
@@ -58,7 +59,7 @@ sbuild-build-depends-core-dummy is already the newest version.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
Merged Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), libmodule-build-perl, bioperl (>= 1.6.0), libgd-gd2-perl (>= 2.3), libstatistics-descriptive-perl
Filtered Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), libmodule-build-perl, bioperl (>= 1.6.0), libgd-gd2-perl (>= 2.3), libstatistics-descriptive-perl
-dpkg-deb: building package `sbuild-build-depends-libbio-graphics-perl-dummy' in `/«BUILDDIR»/resolver-rqYk28/apt_archive/sbuild-build-depends-libbio-graphics-perl-dummy.deb'.
+dpkg-deb: building package `sbuild-build-depends-libbio-graphics-perl-dummy' in `/«BUILDDIR»/resolver-tHcJ9k/apt_archive/sbuild-build-depends-libbio-graphics-perl-dummy.deb'.
OK
Reading package lists...
@@ -73,161 +74,178 @@ Reading state information...
The following extra packages will be installed:
bioperl debhelper file fontconfig-config gettext gettext-base groff-base
html2text intltool-debian libbio-perl-perl libcroco3 libdata-stag-perl
- libexpat1 libfontconfig1 libfreetype6 libgd-gd2-perl libgd2-xpm libglib2.0-0
- libio-string-perl libjpeg62 libmagic1 libpcre3 libpipeline1
+ libexpat1 libffi5 libfontconfig1 libfreetype6 libgd-gd2-perl libgd2-xpm
+ libglib2.0-0 libio-string-perl libjpeg8 libmagic1 libpcre3 libpipeline1
libstatistics-descriptive-perl libunistring0 libx11-6 libx11-data libxau6
- libxcb1 libxdmcp6 libxml2 libxpm4 man-db po-debconf ttf-dejavu-core ucf
+ libxcb1 libxdmcp6 libxml2 libxpm4 man-db po-debconf ttf-dejavu-core
Suggested packages:
dh-make gettext-doc groff libmath-random-perl libxml-sax-expatxs-perl
libgd-tools less www-browser libmail-box-perl
Recommended packages:
- bioperl-run curl wget lynx-cur autopoint libace-perl
+ bioperl-run perl-doc libhttp-message-perl libwww-perl libcache-cache-perl
+ libbio-perl-run-perl libdbi-perl libapache-dbi-perl liburi-perl
+ libxml-simple-perl libyaml-perl libace-perl liblist-moreutils-perl
+ libxml-twig-perl libset-scalar-perl curl wget lynx-cur autopoint
libalgorithm-munkres-perl libarray-compare-perl libbio-asn1-entrezgene-perl
libclone-perl libconvert-binary-c-perl libdbd-sqlite3-perl libdbd-mysql-perl
libdbd-pg-perl libgraph-perl libgraphviz-perl libhtml-parser-perl
- liblist-moreutils-perl libpostscript-perl libset-scalar-perl
- libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl
- libspreadsheet-writeexcel-perl libsvg-perl libsvg-graph-perl liburi-perl
- libxml-dom-xpath-perl libxml-parser-perl libxml-sax-perl
- libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl
- libxml-writer-perl libxml-libxml-perl libwww-perl perl-tk
+ libpostscript-perl libsoap-lite-perl libsort-naturally-perl
+ libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-perl
+ libsvg-graph-perl libxml-dom-xpath-perl libxml-parser-perl libxml-sax-perl
+ libxml-sax-writer-perl libxml-writer-perl libxml-libxml-perl perl-tk
libxml-libxslt-perl libmldbm-perl libglib2.0-data shared-mime-info xml-core
libmail-sendmail-perl
The following NEW packages will be installed:
bioperl debhelper file fontconfig-config gettext gettext-base groff-base
html2text intltool-debian libbio-perl-perl libcroco3 libdata-stag-perl
- libexpat1 libfontconfig1 libfreetype6 libgd-gd2-perl libgd2-xpm libglib2.0-0
- libio-string-perl libjpeg62 libmagic1 libpcre3 libpipeline1
+ libexpat1 libffi5 libfontconfig1 libfreetype6 libgd-gd2-perl libgd2-xpm
+ libglib2.0-0 libio-string-perl libjpeg8 libmagic1 libpcre3 libpipeline1
libstatistics-descriptive-perl libunistring0 libx11-6 libx11-data libxau6
libxcb1 libxdmcp6 libxml2 libxpm4 man-db po-debconf
- sbuild-build-depends-libbio-graphics-perl-dummy ttf-dejavu-core ucf
-debconf: delaying package configuration, since apt-utils is not installed
+ sbuild-build-depends-libbio-graphics-perl-dummy ttf-dejavu-core
0 upgraded, 37 newly installed, 0 to remove and 0 not upgraded.
-Need to get 0 B/20.6 MB of archives.
-After this operation, 58.7 MB of additional disk space will be used.
-Selecting previously deselected package libpipeline1.
-(Reading database ... 10992 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-3_amd64.deb) ...
-Selecting previously deselected package libexpat1.
-Unpacking libexpat1 (from .../libexpat1_2.0.1-7_amd64.deb) ...
-Selecting previously deselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.4-2_amd64.deb) ...
-Selecting previously deselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu2_all.deb) ...
-Moving old data out of the way
-Selecting previously deselected package ttf-dejavu-core.
-Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-1_all.deb) ...
-Selecting previously deselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3_all.deb) ...
-Selecting previously deselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3_amd64.deb) ...
-Selecting previously deselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-3_amd64.deb) ...
-Selecting previously deselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-3_amd64.deb) ...
-Selecting previously deselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.7-3_amd64.deb) ...
-Selecting previously deselected package libx11-data.
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-Selecting previously deselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.3-2_amd64.deb) ...
-Selecting previously deselected package groff-base.
+Need to get 12.7 MB/21.0 MB of archives.
+After this operation, 53.2 MB of additional disk space will be used.
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+Get:3 http://ftp.jp.debian.org/debian/ sid/main libxml2 amd64 2.7.8.dfsg-7 [895 kB]
+Get:4 http://ftp.jp.debian.org/debian/ sid/main libcroco3 amd64 0.6.4-2 [150 kB]
+Get:5 http://ftp.jp.debian.org/debian/ sid/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:6 http://ftp.jp.debian.org/debian/ sid/main libfontconfig1 amd64 2.8.0-3.1 [283 kB]
+Get:7 http://ftp.jp.debian.org/debian/ sid/main libjpeg8 amd64 8d-1 [134 kB]
+Get:8 http://ftp.jp.debian.org/debian/ sid/main libxcb1 amd64 1.8-2 [49.7 kB]
+Get:9 http://ftp.jp.debian.org/debian/ sid/main man-db amd64 2.6.1-1 [1057 kB]
+Get:10 http://ftp.jp.debian.org/debian/ sid/main file amd64 5.10-1 [53.0 kB]
+Get:11 http://ftp.jp.debian.org/debian/ sid/main libbio-perl-perl all 1.6.901-2 [6151 kB]
+Get:12 http://ftp.jp.debian.org/debian/ sid/main bioperl all 1.6.901-2 [464 kB]
+Get:13 http://ftp.jp.debian.org/debian/ sid/main debhelper all 9.20120115 [693 kB]
+Get:14 http://ftp.jp.debian.org/debian/ sid/main libgd2-xpm amd64 2.0.36~rc1~dfsg-6 [231 kB]
+Get:15 http://ftp.jp.debian.org/debian/ sid/main libstatistics-descriptive-perl all 3.0300-1 [27.1 kB]
+Get:16 http://ftp.jp.debian.org/debian/ sid/main libgd-gd2-perl amd64 1:2.46-3+b1 [200 kB]
+debconf: delaying package configuration, since apt-utils is not installed
+Fetched 12.7 MB in 2s (4514 kB/s)
+Selecting previously unselected package libpipeline1.
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+Selecting previously unselected package libfreetype6.
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Unpacking groff-base (from .../groff-base_1.21-6_amd64.deb) ...
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-Unpacking libmagic1 (from .../libmagic1_5.04-5+b1_amd64.deb) ...
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-Selecting previously deselected package libio-string-perl.
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+Selecting previously unselected package libio-string-perl.
Unpacking libio-string-perl (from .../libio-string-perl_1.08-2_all.deb) ...
-Selecting previously deselected package libdata-stag-perl.
+Selecting previously unselected package libdata-stag-perl.
Unpacking libdata-stag-perl (from .../libdata-stag-perl_0.11-2_all.deb) ...
-Selecting previously deselected package libbio-perl-perl.
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-Selecting previously deselected package bioperl.
-Unpacking bioperl (from .../bioperl_1.6.901-1_all.deb) ...
-Selecting previously deselected package html2text.
+Selecting previously unselected package libbio-perl-perl.
+Unpacking libbio-perl-perl (from .../libbio-perl-perl_1.6.901-2_all.deb) ...
+Selecting previously unselected package bioperl.
+Unpacking bioperl (from .../bioperl_1.6.901-2_all.deb) ...
+Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_amd64.deb) ...
-Selecting previously deselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.6-1_amd64.deb) ...
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-Unpacking libcroco3 (from .../libcroco3_0.6.2-1_amd64.deb) ...
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-Unpacking libunistring0 (from .../libunistring0_0.9.3-4_amd64.deb) ...
-Selecting previously deselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-3_amd64.deb) ...
-Selecting previously deselected package intltool-debian.
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.1.1-5_amd64.deb) ...
+Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
-Selecting previously deselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
-Selecting previously deselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.9.0_all.deb) ...
-Selecting previously deselected package libjpeg62.
-Unpacking libjpeg62 (from .../libjpeg62_6b1-2_amd64.deb) ...
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-Unpacking libxpm4 (from .../libxpm4_1%3a3.5.9-1_amd64.deb) ...
-Selecting previously deselected package libgd2-xpm.
-Unpacking libgd2-xpm (from .../libgd2-xpm_2.0.36~rc1~dfsg-5.1_amd64.deb) ...
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-Unpacking libstatistics-descriptive-perl (from .../libstatistics-descriptive-perl_3.0201-1_all.deb) ...
-Selecting previously deselected package libgd-gd2-perl.
-Unpacking libgd-gd2-perl (from .../libgd-gd2-perl_1%3a2.46-1_amd64.deb) ...
-Selecting previously deselected package sbuild-build-depends-libbio-graphics-perl-dummy.
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
+Selecting previously unselected package libgd2-xpm.
+Unpacking libgd2-xpm (from .../libgd2-xpm_2.0.36~rc1~dfsg-6_amd64.deb) ...
+Selecting previously unselected package libstatistics-descriptive-perl.
+Unpacking libstatistics-descriptive-perl (from .../libstatistics-descriptive-perl_3.0300-1_all.deb) ...
+Selecting previously unselected package libgd-gd2-perl.
+Unpacking libgd-gd2-perl (from .../libgd-gd2-perl_1%3a2.46-3+b1_amd64.deb) ...
+Selecting previously unselected package sbuild-build-depends-libbio-graphics-perl-dummy.
Unpacking sbuild-build-depends-libbio-graphics-perl-dummy (from .../sbuild-build-depends-libbio-graphics-perl-dummy.deb) ...
-Setting up libpipeline1 (1.2.0-3) ...
-Setting up libexpat1 (2.0.1-7) ...
-Setting up libfreetype6 (2.4.4-2) ...
-Setting up ucf (3.0025+nmu2) ...
-Setting up ttf-dejavu-core (2.33-1) ...
-Setting up fontconfig-config (2.8.0-3) ...
-Setting up libfontconfig1 (2.8.0-3) ...
-Setting up libxau6 (1:1.0.6-3) ...
-Setting up libxdmcp6 (1:1.1.0-3) ...
-Setting up libxcb1 (1.7-3) ...
-Setting up libx11-data (2:1.4.3-2) ...
-Setting up libx11-6 (2:1.4.3-2) ...
+Setting up libpipeline1 (1.2.0-5) ...
+Setting up libmagic1 (5.10-1) ...
+Setting up libpcre3 (8.12-4) ...
+Setting up libffi5 (3.0.10-3) ...
+Setting up libglib2.0-0 (2.30.2-6) ...
+No schema files found: doing nothing.
+Setting up libxml2 (2.7.8.dfsg-7) ...
+Setting up libcroco3 (0.6.4-2) ...
+Setting up libexpat1 (2.0.1-7.2) ...
+Setting up libfreetype6 (2.4.8-1) ...
+Setting up ttf-dejavu-core (2.33-2) ...
+Setting up fontconfig-config (2.8.0-3.1) ...
+Setting up libfontconfig1 (2.8.0-3.1) ...
+Setting up libjpeg8 (8d-1) ...
+Setting up libunistring0 (0.9.3-5) ...
+Setting up libxau6 (1:1.0.6-4) ...
+Setting up libxdmcp6 (1:1.1.0-4) ...
+Setting up libxcb1 (1.8-2) ...
+Setting up libx11-data (2:1.4.4-4) ...
+Setting up libx11-6 (2:1.4.4-4) ...
+Setting up libxpm4 (1:3.5.9-4) ...
Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.0.2-1) ...
+Setting up man-db (2.6.1-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.04-5+b1) ...
-Setting up file (5.04-5+b1) ...
-Setting up gettext-base (0.18.1.1-3) ...
-Setting up libpcre3 (8.12-3) ...
-Setting up libxml2 (2.7.8.dfsg-3) ...
+Setting up file (5.10-1) ...
+Setting up gettext-base (0.18.1.1-5) ...
Setting up libio-string-perl (1.08-2) ...
Setting up libdata-stag-perl (0.11-2) ...
-Setting up libbio-perl-perl (1.6.901-1) ...
-Setting up bioperl (1.6.901-1) ...
+Setting up libbio-perl-perl (1.6.901-2) ...
+Setting up bioperl (1.6.901-2) ...
Setting up html2text (1.3.2a-15) ...
-Setting up libglib2.0-0 (2.28.6-1) ...
-No schema files found: doing nothing.
-Setting up libcroco3 (0.6.2-1) ...
-Setting up libunistring0 (0.9.3-4) ...
-Setting up gettext (0.18.1.1-3) ...
+Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.9.0) ...
-Setting up libjpeg62 (6b1-2) ...
-Setting up libxpm4 (1:3.5.9-1) ...
-Setting up libgd2-xpm (2.0.36~rc1~dfsg-5.1) ...
-Setting up libstatistics-descriptive-perl (3.0201-1) ...
-Setting up libgd-gd2-perl (1:2.46-1) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120115) ...
+Setting up libgd2-xpm (2.0.36~rc1~dfsg-6) ...
+Setting up libstatistics-descriptive-perl (3.0300-1) ...
+Setting up libgd-gd2-perl (1:2.46-3+b1) ...
Setting up sbuild-build-depends-libbio-graphics-perl-dummy (0.invalid.0) ...
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build environment │
└──────────────────────────────────────────────────────────────────────────────┘
-Kernel: Linux 2.6.32-5-amd64 amd64 (x86_64)
-Toolchain package versions: binutils_2.21.52.20110707-1 dpkg-dev_1.16.0.3 g++-4.6_4.6.1-3 gcc-4.6_4.6.1-3 libc6-dev_2.13-10 libstdc++6_4.6.1-3 libstdc++6-4.6-dev_4.6.1-3 linux-libc-dev_2.6.39-3
-Package versions: apt_0.8.15.2 base-files_6.4 base-passwd_3.5.22 bash_4.1-3 binutils_2.21.52.20110707-1 bioperl_1.6.901-1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-2 build-essential_11.5 bzip2_1.0.5-6 coreutils_8.5-1 cpp_4:4.6.1-2 cpp-4.6_4.6.1-3 dash_0.5.5.1-7.4 debconf_1.5.40 debconf-i18n_1.5.40 debfoster_2.7-1.1 debhelper_8.9.0 debian-archive-keyring_2010.08.28 debianutils_4.0.2 diffutils_1:3.0-1 dpkg_1.16.0.3 dpkg-dev_1.16.0.3 e2fslibs_1.42~WIP-2011-07-02-1 e2fsprogs_1.42~WIP-2011-07-02-1 fakeroot_1.16-1 file_5.04-5+b1 findutils_4.4.2-1+b1 fontconfig-config_2.8.0-3 g++_4:4.6.1-2 g++-4.6_4.6.1-3 gcc_4:4.6.1-2 gcc-4.6_4.6.1-3 gcc-4.6-base_4.6.1-3 gettext_0.18.1.1-3 gettext-base_0.18.1.1-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-1 groff-base_1.21-6 gzip_1.3.12-9 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.11 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-2 libattr1_1:2.4.46-2 libbio-perl-perl_1.6.901-1 libblkid1_2.19.1-2 libbz2-1.0_1.0.5-6 libc-bin_2.13-10 libc-dev-bin_2.13-10 libc6_2.13-10 libc6-dev_2.13-10 libclass-isa-perl_0.36-1 libcloog-ppl0_0.15.9-3 libcomerr2_1.42~WIP-2011-07-02-1 libcroco3_0.6.2-1 libdata-stag-perl_0.11-2 libdb5.1_5.1.25-11 libdpkg-perl_1.16.0.3 libexpat1_2.0.1-7 libfontconfig1_2.8.0-3 libfreetype6_2.4.4-2 libgc1c2_1:7.1-8 libgcc1_1:4.6.1-3 libgd-gd2-perl_1:2.46-1 libgd2-xpm_2.0.36~rc1~dfsg-5.1 libgdbm3_1.8.3-10 libglib2.0-0_2.28.6-1 libgmp10_2:5.0.1+dfsg-7 libgmpxx4ldbl_2:5.0.1+dfsg-7 libgomp1_4.6.1-3 libgpm2_1.20.4-3.4 libio-string-perl_1.08-2 libjpeg62_6b1-2 liblocale-gettext-perl_1.05-6+b1 liblzma2_5.0.0-2 libmagic1_5.04-5+b1 libmount1_2.19.1-2 libmpc2_0.9-3 libmpfr4_3.0.1-4 libncurses5_5.9-1 libpam-modules_1.1.3-2 libpam-modules-bin_1.1.3-2 libpam-runtime_1.1.3-2 libpam0g_1.1.3-2 libpcre3_8.12-3 libpipeline1_1.2.0-3 libpng12-0_1.2.44-3 libpod-plainer-perl_1.03-1 libppl-c4_0.11.2-4 libppl9_0.11.2-4 libpwl5_0.11.2-4 libquadmath0_4.6.1-3 libreadline6_6.2-2 libselinux1_2.0.98-1.1 libsepol1_2.0.42-1 libslang2_2.2.4-2 libss2_1.42~WIP-2011-07-02-1 libstatistics-descriptive-perl_3.0201-1 libstdc++6_4.6.1-3 libstdc++6-4.6-dev_4.6.1-3 libswitch-perl_2.16-1 libtext-charwidth-perl_0.04-6+b1 libtext-iconv-perl_1.7-2+b1 libtext-wrapi18n-perl_0.06-7 libtimedate-perl_1.2000-1 libunistring0_0.9.3-4 libusb-0.1-4_2:0.1.12-17 libuuid1_2.19.1-2 libx11-6_2:1.4.3-2 libx11-data_2:1.4.3-2 libxau6_1:1.0.6-3 libxcb1_1.7-3 libxdmcp6_1:1.1.0-3 libxml2_2.7.8.dfsg-3 libxpm4_1:3.5.9-1 linux-libc-dev_2.6.39-3 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-27 make_3.81-8.1 man-db_2.6.0.2-1 mawk_1.3.3-15 mount_2.19.1-2 multiarch-support_2.13-10 ncurses-base_5.9-1 ncurses-bin_5.9-1 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.12.4-1 perl-base_5.12.4-1 perl-modules_5.12.4-1 po-debconf_1.0.16+nmu1 readline-common_6.2-2 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libbio-graphics-perl-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-13.11 sysvinit_2.88dsf-13.11 sysvinit-utils_2.88dsf-13.11 tar_1.25-3 ttf-dejavu-core_2.33-1 tzdata_2011h-3 ucf_3.0025+nmu2 util-linux_2.19.1-2 xz-utils_5.0.0-2 zlib1g_1:1.2.3.4.dfsg-3
+Kernel: Linux 2.6.39-bpo.2-amd64 amd64 (x86_64)
+Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.2-14 gcc-4.6_4.6.2-14 libc6-dev_2.13-26 libstdc++6_4.6.2-14 libstdc++6-4.6-dev_4.6.2-14 linux-libc-dev_3.2.6-1
+Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bioperl_1.6.901-2 bsdmainutils_9.0.1 bsdutils_1:2.20.1-1.2 build-essential_11.5 bzip2_1.0.6-1 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.2-14 dash_0.5.7-2 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-1 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-1 e2fsprogs_1.42.1-1 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.2-14 gcc_4:4.6.2-4 gcc-4.6_4.6.2-14 gcc-4.6-base_4.6.2-14 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-2 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libbio-perl-perl_1.6.901-2 libblkid1_2.20.1-1.2 libbz2-1.0_1.0.6-1 libc-bin_2.13-26 libc-dev-bin_2.13-26 libc6_2.13-26 libc6-dev_2.13-26 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-1 libcroco3_0.6.4-2 libdata-stag-perl_0.11-2 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-14 libgd-gd2-perl_1:2.46-3+b1 libgd2-xpm_2.0.36~rc1~dfsg-6 libgdbm3_1.8.3-10 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.2-14 libgpm2_1.20.4-4 libio-string-perl_1.08-2 libjpeg8_8d-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-1.2 libmpc2_0.9-4 libmpfr4_3.1.0-3 libncurses5_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpcre3_8.12-4 libpipeline1_1.2.0-5 libpng12-0_1.2.47-1 libpod-plainer-perl_1.03-1 libquadmath0_4.6.2-14 libreadline6_6.2-8 libselinux1_2.1.0-4.1 libsemanage-common_2.1.0-2 libsemanage1_2.1.0-2 libsepol1_2.1.0-1.2 libslang2_2.2.4-6 libss2_1.42.1-1 libstatistics-descriptive-perl_3.0300-1 libstdc++6_4.6.2-14 libstdc++6-4.6-dev_4.6.2-14 libswitch-perl_2.16-2 libtimedate-perl_1.2000-1 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-1.2 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxml2_2.7.8.dfsg-7 libxpm4_1:3.5.9-4 linux-libc-dev_3.2.6-1 login_1:4.1.5-1 lsb-base_3.2-28.1 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 mount_2.20.1-1.2 multiarch-support_2.13-26 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-7 perl-base_5.14.2-7 perl-modules_5.14.2-7 po-debconf_1.0.16+nmu2 readline-common_6.2-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-libbio-graphics-perl-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 ttf-dejavu-core_2.33-2 tzdata_2011n-2 ucf_3.0025+nmu2 util-linux_2.20.1-1.2 xz-utils_5.1.1alpha+20110809-3 zlib1g_1:1.2.6.dfsg-1
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -237,10 +255,10 @@ Package versions: apt_0.8.15.2 base-files_6.4 base-passwd_3.5.22 bash_4.1-3 binu
Unpack source
─────────────
-dpkg-source: warning: extracting unsigned source package (libbio-graphics-perl_2.24-1.dsc)
-dpkg-source: info: extracting libbio-graphics-perl in libbio-graphics-perl-2.24
-dpkg-source: info: unpacking libbio-graphics-perl_2.24.orig.tar.gz
-dpkg-source: info: applying libbio-graphics-perl_2.24-1.diff.gz
+dpkg-source: warning: extracting unsigned source package (libbio-graphics-perl_2.26-1.dsc)
+dpkg-source: info: extracting libbio-graphics-perl in libbio-graphics-perl-2.26
+dpkg-source: info: unpacking libbio-graphics-perl_2.26.orig.tar.gz
+dpkg-source: info: applying libbio-graphics-perl_2.26-1.diff.gz
Check disc space
────────────────
@@ -257,7 +275,7 @@ SCHROOT_CHROOT_NAME=sid-amd64-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=1000
SCHROOT_GROUP=charles
-SCHROOT_SESSION_ID=sid-amd64-sbuild-d61436f1-759f-43af-a95a-771a878c8950
+SCHROOT_SESSION_ID=sid-amd64-sbuild-8ffdc859-a309-4c7c-9e84-a0b1c5ac59ed
SCHROOT_UID=31051
SCHROOT_USER=charles
SHELL=/bin/sh
@@ -268,27 +286,22 @@ USERNAME=charles
dpkg-buildpackage
─────────────────
-dpkg-buildpackage: export CFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export CPPFLAGS from dpkg-buildflags (origin: vendor):
-dpkg-buildpackage: export CXXFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export FFLAGS from dpkg-buildflags (origin: vendor): -g -O2
-dpkg-buildpackage: export LDFLAGS from dpkg-buildflags (origin: vendor):
dpkg-buildpackage: source package libbio-graphics-perl
-dpkg-buildpackage: source version 2.24-1
+dpkg-buildpackage: source version 2.26-1
dpkg-buildpackage: source changed by Charles Plessy <plessy at debian.org>
- dpkg-source --before-build libbio-graphics-perl-2.24
+ dpkg-source --before-build libbio-graphics-perl-2.26
dpkg-buildpackage: host architecture amd64
fakeroot debian/rules clean
dh clean
dh_testdir
dh_auto_clean
dh_clean
- dpkg-source -b libbio-graphics-perl-2.24
+ dpkg-source -b libbio-graphics-perl-2.26
dpkg-source: warning: no source format specified in debian/source/format, see dpkg-source(1)
dpkg-source: info: using source format `1.0'
-dpkg-source: info: building libbio-graphics-perl using existing libbio-graphics-perl_2.24.orig.tar.gz
-dpkg-source: info: building libbio-graphics-perl in libbio-graphics-perl_2.24-1.diff.gz
-dpkg-source: info: building libbio-graphics-perl in libbio-graphics-perl_2.24-1.dsc
+dpkg-source: info: building libbio-graphics-perl using existing libbio-graphics-perl_2.26.orig.tar.gz
+dpkg-source: info: building libbio-graphics-perl in libbio-graphics-perl_2.26-1.diff.gz
+dpkg-source: info: building libbio-graphics-perl in libbio-graphics-perl_2.26-1.dsc
debian/rules build
dh build
dh_testdir
@@ -303,15 +316,15 @@ of the modules indicated above before proceeding with this installation
Run 'Build installdeps' to install missing prerequisites.
-Creating new 'MYMETA.yml' with configuration results
-Creating new 'Build' script for 'Bio-Graphics' version '2.24'
+Created MYMETA.yml and MYMETA.json
+Creating new 'Build' script for 'Bio-Graphics' version '2.26'
dh_auto_build
Building Bio-Graphics
dh_auto_test
t/BioGraphics.t .. ok
t/Wiggle.t ....... ok
All tests successful.
-Files=2, Tests=63, 3 wallclock secs ( 0.02 usr 0.01 sys + 0.69 cusr 0.07 csys = 0.79 CPU)
+Files=2, Tests=63, 1 wallclock secs ( 0.00 usr 0.03 sys + 0.69 cusr 0.06 csys = 0.78 CPU)
Result: PASS
fakeroot debian/rules binary
dh binary
@@ -351,6 +364,7 @@ Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Grap
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/repeating_shape.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/cds.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/primers.pm
+Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/scale.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/three_letters.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/ruler_arrow.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/christmas_arrow.pm
@@ -367,10 +381,10 @@ Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Grap
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/merge_parts.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/processed_transcript.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/redgreen_box.pm
-Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/wiggle_minmax.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/merged_alignment.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/wiggle_whiskers.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/two_bolts.pm
+Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/wiggle_data.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/hidden.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/vista_plot.pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/perl5/Bio/Graphics/Glyph/segments.pm
@@ -455,6 +469,7 @@ Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/man/man3/Bio::
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/man/man3/Bio::Graphics::Glyph::whiskerplot.3pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/man/man3/Bio::Graphics::Glyph::ternary_plot.3pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/man/man3/Bio::Graphics::Glyph::dashed_line.3pm
+Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/man/man3/Bio::Graphics::Glyph::scale.3pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/man/man3/Bio::Graphics::Glyph::merged_alignment.3pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/man/man3/Bio::Graphics::Glyph::heat_map.3pm
Installing /«PKGBUILDDIR»/debian/libbio-graphics-perl/usr/share/man/man3/Bio::Graphics::Glyph::xyplot.3pm
@@ -564,20 +579,17 @@ make[1]: Leaving directory `/«PKGBUILDDIR»'
dh_link
dh_compress
dh_fixperms
- dh_strip
- dh_makeshlibs
- dh_shlibdeps
dh_installdeb
dh_gencontrol
dh_md5sums
dh_builddeb
-dpkg-deb: building package `libbio-graphics-perl' in `../libbio-graphics-perl_2.24-1_all.deb'.
- dpkg-genchanges >../libbio-graphics-perl_2.24-1_amd64.changes
+dpkg-deb: building package `libbio-graphics-perl' in `../libbio-graphics-perl_2.26-1_all.deb'.
+ dpkg-genchanges >../libbio-graphics-perl_2.26-1_amd64.changes
dpkg-genchanges: including full source code in upload
- dpkg-source --after-build libbio-graphics-perl-2.24
+ dpkg-source --after-build libbio-graphics-perl-2.26
dpkg-buildpackage: full upload (original source is included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20110714-1957
+Build finished at 20120220-1308
Finished
────────
@@ -589,62 +601,59 @@ I: Built successfully
└──────────────────────────────────────────────────────────────────────────────┘
-libbio-graphics-perl_2.24-1_amd64.changes:
+libbio-graphics-perl_2.26-1_amd64.changes:
──────────────────────────────────────────
Format: 1.8
-Date: Thu, 14 Jul 2011 19:50:40 +0900
+Date: Mon, 20 Feb 2012 13:05:39 +0900
Source: libbio-graphics-perl
Binary: libbio-graphics-perl
Architecture: source all
-Version: 2.24-1
+Version: 2.26-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Changed-By: Charles Plessy <plessy at debian.org>
Description:
libbio-graphics-perl - Generate GD images of Bio::Seq objects
+Closes: 660481
Changes:
- libbio-graphics-perl (2.24-1) unstable; urgency=low
+ libbio-graphics-perl (2.26-1) unstable; urgency=low
.
- * New usptream release.
- * Replaced deprecated ‘<’ by ‘<<’ in debian/control.
- * Renamed debian/README.Debian debian/README.test, as it only discusses tests
- * Incremented Standards-Version to reflect conformance with Policy 3.9.1
- (debian/control, no changes needed).
+ * New upstream release (Closes: #660481).
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- c5fa87df353cce37ecd379e86febe46865e05834 860229 libbio-graphics-perl_2.24.orig.tar.gz
- b6e3f4686183f780ac49d36b6730ec12f80cfe54 8522 libbio-graphics-perl_2.24-1.diff.gz
- 67b506b3355b31e8e58f5d72c6918bd655f5b033 665984 libbio-graphics-perl_2.24-1_all.deb
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- e72c7279d21b477fe37c8c25511a459f74ecfe4a73a2b6782203f7114e335b38 665984 libbio-graphics-perl_2.24-1_all.deb
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+ 74aa3474d218648b4442bf10cd236959b859c2771057a31cade8ef1a181de00f 669284 libbio-graphics-perl_2.26-1_all.deb
Files:
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- d0da5080ba2c092c4f0d215696973208 860229 perl optional libbio-graphics-perl_2.24.orig.tar.gz
- cd4540a846a63556f3aa669ffcc337ab 8522 perl optional libbio-graphics-perl_2.24-1.diff.gz
- 714e88d6e1998005cf6eb7334a4ec840 665984 perl optional libbio-graphics-perl_2.24-1_all.deb
+ 142aa01c2cf0d2a1edfaa685285b364a 1267 perl optional libbio-graphics-perl_2.26-1.dsc
+ d18c97662759998a05c9df56f99602e4 967246 perl optional libbio-graphics-perl_2.26.orig.tar.gz
+ 9a521ad27f84f6efc8acfda51c873ac8 8524 perl optional libbio-graphics-perl_2.26-1.diff.gz
+ faf617f92b9dc3cf90bdd5be67ef2721 669284 perl optional libbio-graphics-perl_2.26-1_all.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-libbio-graphics-perl_2.24-1_all.deb
+libbio-graphics-perl_2.26-1_all.deb
───────────────────────────────────
new debian package, version 2.0.
- size 665984 bytes: control archive= 6859 bytes.
+ size 669284 bytes: control archive= 6896 bytes.
903 bytes, 19 lines control
- 18575 bytes, 218 lines md5sums
+ 18739 bytes, 220 lines md5sums
Package: libbio-graphics-perl
- Version: 2.24-1
+ Version: 2.26-1
Architecture: all
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1944
+ Installed-Size: 1582
Depends: perl, bioperl (>= 1.6.0), libgd-gd2-perl (>= 2.3)
Recommends: libbio-scf-perl, libfile-spec-perl, libgd-svg-perl, libstatistics-descriptive-perl
Breaks: bioperl (<< 1.6.0)
@@ -660,240 +669,242 @@ libbio-graphics-perl_2.24-1_all.deb
type of map in which a set of discrete ranges need to be laid out on
the number line.
-drwxr-xr-x root/root 0 2011-07-14 19:57 ./
-drwxr-xr-x root/root 0 2011-07-14 19:57 ./usr/
-drwxr-xr-x root/root 0 2011-07-14 19:57 ./usr/bin/
--rwxr-xr-x root/root 2187 2011-07-14 19:57 ./usr/bin/render_msa.pl
--rwxr-xr-x root/root 12383 2011-07-14 19:57 ./usr/bin/feature_draw.pl
--rwxr-xr-x root/root 4413 2011-07-14 19:57 ./usr/bin/search_overview.pl
--rwxr-xr-x root/root 8478 2011-07-14 19:57 ./usr/bin/glyph_help.pl
--rwxr-xr-x root/root 23334 2011-07-14 19:57 ./usr/bin/frend.pl
--rwxr-xr-x root/root 5716 2011-07-14 19:57 ./usr/bin/contig_draw.pl
-drwxr-xr-x root/root 0 2011-07-14 19:57 ./usr/share/
-drwxr-xr-x root/root 0 2011-07-14 19:57 ./usr/share/man/
-drwxr-xr-x root/root 0 2011-07-14 19:57 ./usr/share/man/man3/
--rw-r--r-- root/root 5294 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::xyplot.3pm.gz
--rw-r--r-- root/root 4894 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::heat_map.3pm.gz
--rw-r--r-- root/root 3695 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::fixedwidth.3pm.gz
--rw-r--r-- root/root 2742 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::heterogeneous_segments.3pm.gz
--rw-r--r-- root/root 3090 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::spectrogram.3pm.gz
--rw-r--r-- root/root 2351 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::span.3pm.gz
--rw-r--r-- root/root 3371 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::translation.3pm.gz
--rw-r--r-- root/root 2400 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::repeating_shape.3pm.gz
--rw-r--r-- root/root 2474 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::primers.3pm.gz
--rw-r--r-- root/root 2345 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::toomany.3pm.gz
--rw-r--r-- root/root 2506 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::wave.3pm.gz
--rw-r--r-- root/root 2693 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::broken_line.3pm.gz
--rw-r--r-- root/root 2541 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::pentagram.3pm.gz
--rw-r--r-- root/root 2352 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::extending_arrow.3pm.gz
--rw-r--r-- root/root 3470 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::wiggle_density.3pm.gz
--rw-r--r-- root/root 3412 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::processed_transcript.3pm.gz
--rw-r--r-- root/root 2637 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::box.3pm.gz
--rw-r--r-- root/root 3595 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Wiggle::Loader.3pm.gz
--rw-r--r-- root/root 2494 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::triangle.3pm.gz
--rw-r--r-- root/root 3539 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::hybrid_plot.3pm.gz
--rw-r--r-- root/root 3570 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::Factory.3pm.gz
--rw-r--r-- root/root 3499 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::gene.3pm.gz
--rw-r--r-- root/root 3249 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::phylo_align.3pm.gz
--rw-r--r-- root/root 3328 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::vista_plot.3pm.gz
--rw-r--r-- root/root 2785 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::diamond.3pm.gz
--rw-r--r-- root/root 4093 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::stackedplot.3pm.gz
--rw-r--r-- root/root 2440 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::text_in_box.3pm.gz
--rw-r--r-- root/root 2740 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::lightning.3pm.gz
--rw-r--r-- root/root 2826 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::RendererI.3pm.gz
--rw-r--r-- root/root 3947 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::DrawTransmembrane.3pm.gz
--rw-r--r-- root/root 3488 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::pairplot.3pm.gz
--rw-r--r-- root/root 2606 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::weighted_arrow.3pm.gz
--rw-r--r-- root/root 5331 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Wiggle.3pm.gz
--rw-r--r-- root/root 2558 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::oval.3pm.gz
--rw-r--r-- root/root 2745 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::transcript2.3pm.gz
--rw-r--r-- root/root 2656 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::line.3pm.gz
--rw-r--r-- root/root 2446 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::christmas_arrow.3pm.gz
--rw-r--r-- root/root 2250 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::rndrect.3pm.gz
--rw-r--r-- root/root 3225 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::ruler_arrow.3pm.gz
--rw-r--r-- root/root 3150 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::ConfiguratorI.3pm.gz
--rw-r--r-- root/root 5254 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::trace.3pm.gz
--rw-r--r-- root/root 2035 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::FeatureBase.3pm.gz
--rw-r--r-- root/root 3030 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::protein.3pm.gz
--rw-r--r-- root/root 2165 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::merge_parts.3pm.gz
--rw-r--r-- root/root 2792 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::alignment.3pm.gz
--rw-r--r-- root/root 2344 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::heat_map_ideogram.3pm.gz
--rw-r--r-- root/root 2658 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::hat.3pm.gz
--rw-r--r-- root/root 5892 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::whiskerplot.3pm.gz
--rw-r--r-- root/root 3553 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::arrow.3pm.gz
--rw-r--r-- root/root 3397 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::ternary_plot.3pm.gz
--rw-r--r-- root/root 2375 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::flag.3pm.gz
--rw-r--r-- root/root 3030 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::anchored_arrow.3pm.gz
--rw-r--r-- root/root 2910 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::ragged_ends.3pm.gz
--rw-r--r-- root/root 3408 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::graded_segments.3pm.gz
--rw-r--r-- root/root 2695 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::transcript.3pm.gz
--rw-r--r-- root/root 2160 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::so_transcript.3pm.gz
--rw-r--r-- root/root 11327 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::FeatureFile.3pm.gz
--rw-r--r-- root/root 3407 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::generic.3pm.gz
--rw-r--r-- root/root 2832 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::redgreen_box.3pm.gz
--rw-r--r-- root/root 2158 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::group.3pm.gz
--rw-r--r-- root/root 2598 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::redgreen_segment.3pm.gz
--rw-r--r-- root/root 3541 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::allele_tower.3pm.gz
--rw-r--r-- root/root 1913 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Util.3pm.gz
--rw-r--r-- root/root 21792 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Panel.3pm.gz
--rw-r--r-- root/root 2239 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::FeatureFile::Iterator.3pm.gz
--rw-r--r-- root/root 2586 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::hidden.3pm.gz
--rw-r--r-- root/root 10288 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph.3pm.gz
--rw-r--r-- root/root 2530 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::crossbox.3pm.gz
--rw-r--r-- root/root 3521 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Pictogram.3pm.gz
--rw-r--r-- root/root 5624 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Feature.3pm.gz
--rw-r--r-- root/root 3247 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics.3pm.gz
--rw-r--r-- root/root 2610 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::ellipse.3pm.gz
--rw-r--r-- root/root 3455 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::dna.3pm.gz
--rw-r--r-- root/root 2538 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::ex.3pm.gz
--rw-r--r-- root/root 2381 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::saw_teeth.3pm.gz
--rw-r--r-- root/root 2450 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::three_letters.3pm.gz
--rw-r--r-- root/root 4534 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::ideogram.3pm.gz
--rw-r--r-- root/root 3695 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::wiggle_xyplot.3pm.gz
--rw-r--r-- root/root 4724 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::segments.3pm.gz
--rw-r--r-- root/root 4206 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::cds.3pm.gz
--rw-r--r-- root/root 2435 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::tic_tac_toe.3pm.gz
--rw-r--r-- root/root 2157 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::minmax.3pm.gz
--rw-r--r-- root/root 2498 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::splice_site.3pm.gz
--rw-r--r-- root/root 2242 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::track.3pm.gz
--rw-r--r-- root/root 3565 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::wiggle_box.3pm.gz
--rw-r--r-- root/root 2544 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::dashed_line.3pm.gz
--rw-r--r-- root/root 2660 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::dot.3pm.gz
--rw-r--r-- root/root 4555 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::image.3pm.gz
--rw-r--r-- root/root 3134 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::FeatureDir.3pm.gz
--rw-r--r-- root/root 3507 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::rainbow_gene.3pm.gz
--rw-r--r-- root/root 2450 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::two_bolts.3pm.gz
--rw-r--r-- root/root 2255 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::operon.3pm.gz
--rw-r--r-- root/root 2272 2011-07-14 19:57 ./usr/share/man/man3/Bio::Graphics::Glyph::segmented_keyglyph.3pm.gz
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┌──────────────────────────────────────────────────────────────────────────────┐
@@ -904,7 +915,10 @@ drwxr-xr-x root/root 0 2011-07-14 19:57 ./usr/share/doc/libbio-graphics-
lintian
───────
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I: libbio-graphics-perl source: missing-debian-source-format
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W: libbio-graphics-perl: binary-without-manpage usr/bin/glyph_help.pl
W: libbio-graphics-perl: binary-without-manpage usr/bin/render_msa.pl
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I: Lintian run was successful.
@@ -930,101 +946,25 @@ I: Lintian run was successful.
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
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-Reading state information...
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-Reading package lists...
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-After this operation, 58.7 MB disk space will be freed.
-(Reading database ... 14920 files and directories currently installed.)
-Removing sbuild-build-depends-libbio-graphics-perl-dummy ...
-Removing bioperl ...
-Removing debhelper ...
-Removing file ...
-Removing libgd-gd2-perl ...
-Removing libgd2-xpm ...
-Purging configuration files for libgd2-xpm ...
-Removing libfontconfig1 ...
-Purging configuration files for libfontconfig1 ...
-Removing fontconfig-config ...
-Purging configuration files for fontconfig-config ...
-Removing po-debconf ...
-Removing intltool-debian ...
-Removing gettext ...
-Removing gettext-base ...
-Removing man-db ...
-Purging configuration files for man-db ...
-Removing groff-base ...
-Purging configuration files for groff-base ...
-Removing html2text ...
-Purging configuration files for html2text ...
-Removing libbio-perl-perl ...
-Removing libcroco3 ...
-Purging configuration files for libcroco3 ...
-Removing libdata-stag-perl ...
-Removing libexpat1 ...
-Purging configuration files for libexpat1 ...
-Removing libfreetype6 ...
-Purging configuration files for libfreetype6 ...
-Removing libglib2.0-0 ...
-Purging configuration files for libglib2.0-0 ...
-Removing libio-string-perl ...
-Removing libjpeg62 ...
-Removing libmagic1 ...
-Purging configuration files for libmagic1 ...
-Removing libpcre3 ...
-Purging configuration files for libpcre3 ...
-Removing libpipeline1 ...
-Purging configuration files for libpipeline1 ...
-Removing libstatistics-descriptive-perl ...
-Removing libunistring0 ...
-Purging configuration files for libunistring0 ...
-Removing libxpm4 ...
-Purging configuration files for libxpm4 ...
-Removing libx11-6 ...
-Purging configuration files for libx11-6 ...
-Removing libx11-data ...
-Removing libxcb1 ...
-Purging configuration files for libxcb1 ...
-Removing libxau6 ...
-Purging configuration files for libxau6 ...
-Removing libxdmcp6 ...
-Purging configuration files for libxdmcp6 ...
-Removing libxml2 ...
-Purging configuration files for libxml2 ...
-Removing ttf-dejavu-core ...
-Removing ucf ...
-Purging configuration files for ucf ...
+Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: amd64
-Build-Space: 8360
-Build-Time: 8
+Build-Space: 8712
+Build-Time: 7
Distribution: unstable
-Install-Time: 44
-Job: libbio-graphics-perl_2.24-1.dsc
+Install-Time: 7
+Job: libbio-graphics-perl_2.26-1.dsc
Lintian: pass
Package: libbio-graphics-perl
-Package-Time: 54
-Source-Version: 2.24-1
-Space: 8360
+Package-Time: 18
+Source-Version: 2.26-1
+Space: 8712
Status: successful
-Version: 2.24-1
+Version: 2.26-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20110714-1957
-Build needed 00:00:54, 8360k disc space
+Finished at 20120220-1308
+Build needed 00:00:18, 8712k disc space
diff --git a/dsc b/dsc
index 9016d60..4625223 100644
--- a/dsc
+++ b/dsc
@@ -1,11 +1,8 @@
------BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA256
-
Format: 1.0
Source: libbio-graphics-perl
Binary: libbio-graphics-perl
Architecture: all
-Version: 2.24-1
+Version: 2.26-1
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy at debian.org>
Dm-Upload-Allowed: yes
@@ -15,30 +12,14 @@ Vcs-Browser: http://git.debian.org/?p=debian-med/libbio-graphics-perl.git
Vcs-Git: git://git.debian.org/debian-med/libbio-graphics-perl.git
Build-Depends: debhelper (>= 8), libmodule-build-perl
Build-Depends-Indep: bioperl (>= 1.6.0), libgd-gd2-perl (>= 2.3), libstatistics-descriptive-perl
+Package-List:
+ libbio-graphics-perl deb perl optional
Checksums-Sha1:
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- b6e3f4686183f780ac49d36b6730ec12f80cfe54 8522 libbio-graphics-perl_2.24-1.diff.gz
+ 2871620d581a4d5fd07fde591840dabc454e1d8e 967246 libbio-graphics-perl_2.26.orig.tar.gz
+ 40a31a6c471bcc994ce41c30ea2e9c5196ff7a51 8524 libbio-graphics-perl_2.26-1.diff.gz
Checksums-Sha256:
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- 4c3fc518d02b9ca0cc84085bf65351ed86d22e493b895c4107d8c50491fdae54 8522 libbio-graphics-perl_2.24-1.diff.gz
+ 2bc1b7e58e893a977313364c70553a0e63f8bf59af8b966438a88340e1ed323a 967246 libbio-graphics-perl_2.26.orig.tar.gz
+ 0e75b59fdf87c651ff0adda9ea85e517a08765d29a26c25e5bbf5e518964859e 8524 libbio-graphics-perl_2.26-1.diff.gz
Files:
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- cd4540a846a63556f3aa669ffcc337ab 8522 libbio-graphics-perl_2.24-1.diff.gz
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+ 9a521ad27f84f6efc8acfda51c873ac8 8524 libbio-graphics-perl_2.26-1.diff.gz
--
Generate GD images of Bio::Seq objects.
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