[med-svn] [SCM] bowtie2 branch, master, updated. upstream/2.0.0-beta5-9-g794bafa

[Alexandre Mestiashvili]

The following commit has been merged in the master branch:
commit 794bafae716cb47616d750a321585ebaf497565d
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Wed Feb 22 12:35:04 2012 +0100

    debian/rules using commit of Andreas

diff --git a/debian/rules b/debian/rules
index 559fce6..2f74e57 100755
--- a/debian/rules
+++ b/debian/rules
@@ -7,15 +7,14 @@ pkg=$(shell dpkg-parsechangelog | sed -n 's/^Source: //p')
 
 override_dh_auto_install:
 	mkdir -p $(CURDIR)/debian/$(pkg)/usr/share/man/man1/
-
 	help2man --name="wrapper for bowtie2-align" --no-info \
-	    $(CURDIR)/bowtie2 > $(CURDIR)/debian/$(pkg)/usr/share/man/man1/bowtie2.1
-	help2man --name="builds a Bowtie index from a set of DNA sequences" --no-info \
-	    $(CURDIR)/bowtie2-build > $(CURDIR)/debian/$(pkg)/usr/share/man/man1/bowtie2-build.1
-	help2man --name="extracts information from a bowtie2 index" --no-info \
-	    $(CURDIR)/bowtie2-inspect > $(CURDIR)/debian/$(pkg)/usr/share/man/man1/bowtie2-inspect.1
+		$(CURDIR)/$(pkg) > $(CURDIR)/debian/$(pkg)/usr/share/man/man1/$(pkg).1
+	help2man --name="building a colorspace index for $(pkg)" --no-info \
+		$(CURDIR)/$(pkg)-build > $(CURDIR)/debian/$(pkg)/usr/share/man/man1/$(pkg)-build.1
+	help2man --name="extracts information from a $(pkg) index" --no-info \
+		$(CURDIR)/$(pkg)-inspect > $(CURDIR)/debian/$(pkg)/usr/share/man/man1/$(pkg)-inspect.1
 	help2man --name="ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences" --no-info \
-	    $(CURDIR)/bowtie2-align> $(CURDIR)/debian/$(pkg)/usr/share/man/man1/bowtie2-align.1
+	    $(CURDIR)/$(pkg)-align> $(CURDIR)/debian/$(pkg)/usr/share/man/man1/$(pkg)-align.1
 
 override_dh_installchangelogs:
 	dh_installchangelogs NEWS

-- 
ultrafast memory-efficient short read aligner