[med-svn] r9753 - in trunk/packages/hhsuite/trunk/debian: . patches

Wed Feb 22 15:25:40 UTC 2012

Author: lkajan-guest
Date: 2012-02-22 15:25:40 +0000 (Wed, 22 Feb 2012)
New Revision: 9753

Modified:
   trunk/packages/hhsuite/trunk/debian/README.source
   trunk/packages/hhsuite/trunk/debian/control
   trunk/packages/hhsuite/trunk/debian/copyright
   trunk/packages/hhsuite/trunk/debian/patches/Makefile
   trunk/packages/hhsuite/trunk/debian/patches/default_path
Log:
debian/copyright enhanced; patches are now described in hearder; control file enhanced.

Modified: trunk/packages/hhsuite/trunk/debian/README.source
===================================================================

--- trunk/packages/hhsuite/trunk/debian/README.source	2012-02-22 13:27:26 UTC (rev 9752)
+++ trunk/packages/hhsuite/trunk/debian/README.source	2012-02-22 15:25:40 UTC (rev 9753)
@@ -3,15 +3,6 @@
 
 Patches
 .......
+Patches are documented in their headers.
 
-Makefile:
-* makes Makefile DESTDIR-aware
-* uses $(MAKE) -C for making in subdirectories
-* fixes install mode of data files
-* deinstall -> uninstall
-
-default_path:
-* fixes issues where the path in help pages is taken from the build-time
-  location of the executables
-
 # vim:et:ts=2:

Modified: trunk/packages/hhsuite/trunk/debian/control
===================================================================
--- trunk/packages/hhsuite/trunk/debian/control	2012-02-22 13:27:26 UTC (rev 9752)
+++ trunk/packages/hhsuite/trunk/debian/control	2012-02-22 15:25:40 UTC (rev 9753)
@@ -35,7 +35,6 @@
 Package: hhsuite-dbg
 Architecture: amd64
 Section: debug
-Priority: extra
 Depends: hhsuite (= ${binary:Version}), ${shlibs:Depends}, ${misc:Depends}
 Description: sensitive protein sequence searching based on HMM-HMM alignment
  HH-suite is an open-source software package for sensitive protein sequence
@@ -86,7 +85,6 @@
 Package: libffindex0-dbg
 Architecture: any
 Section: debug
-Priority: extra
 Depends: libffindex0 (= ${binary:Version}), ${misc:Depends}
 Description: simple index/database for huge amounts of small files
  FFindex is a very simple index/database for huge amounts of small files. The

Modified: trunk/packages/hhsuite/trunk/debian/copyright
===================================================================
--- trunk/packages/hhsuite/trunk/debian/copyright	2012-02-22 13:27:26 UTC (rev 9752)
+++ trunk/packages/hhsuite/trunk/debian/copyright	2012-02-22 15:25:40 UTC (rev 9753)
@@ -1,8 +1,10 @@
 Format: http://dep.debian.net/deps/dep5
 Upstream-Name: hhsuite
-Source: ftp://toolkit.lmb.uni-muenchen.de/HH-suite/hhsuite-([0-9.]+)\.tar\.gz
+Upstream-Contact: Andreas Hauser <hauser at genzentrum.lmu.de>
+                  Johannes Soeding <soeding at genzentrum.lmu.de>
+Source: ftp://toolkit.lmb.uni-muenchen.de/HH-suite/releases/hhsuite-([0-9.]+)\.tar\.gz
 
-Files: src/fmemopen.c lib/ffindex/src/ext/fmemopen.c
+Files: src/fmemopen.c src/fmemopen.h lib/ffindex/src/ext/fmemopen.c lib/ffindex/src/ext/fmemopen.h
 Copyright: 2009 Open Information Security Foundation
 License: GPL-2.0+
 
@@ -12,11 +14,11 @@
 
 Files: src/pngwriter.cc src/pngwriter.h
 Copyright: 2002, 2003 Paul Blackburn
-License: GPL
+License: GPL-2.0+
 
 Files: lib/ffindex/*
 Copyright: Andy Hauser <hauser at genzentrum.lmu.de>
-License: Create Commons license "Attribution-ShareAlike 3.0"
+License: CC-BY-SA-3.0
 
 Files: debian/*
 Copyright: 2012 Laszlo Kajan <lkajan at rostlab.org>
@@ -24,11 +26,49 @@
 
 Files: *
 Copyright: 2006, 2012 Johannes Soeding
-	   2012 Michael Remmert
-	   2012 Andreas Hauser <hauser at genzentrum.lmu.de>
+           2012 Michael Remmert
+           2012 Andreas Hauser <hauser at genzentrum.lmu.de>
            2006, 2009, 2012 Andreas Biegert
 License: GPL-3.0+
 
+License: CC-BY-SA-3.0
+ Create Commons license "Attribution-ShareAlike 3.0"
+ .
+ See: http://creativecommons.org/licenses/by-sa/3.0/
+ .
+ Basically you are free:
+ .
+     * to Share — to copy, distribute and transmit the work
+     * to Remix — to adapt the work
+ .
+ Under the following conditions:
+ .
+     * Attribution
+       You must attribute the work in the manner specified by the author or
+       licensor (but not in any way that suggests that they endorse you or your
+       use of the work).
+     * Share Alike
+       If you alter, transform, or build upon this work, you may distribute the
+       resulting work only under the same or similar license to this one. 
+
+License: GPL-2.0+
+ This program is free software; you can redistribute it and/or
+ modify it under the terms of the GNU General Public License
+ as published by the Free Software Foundation; either version 2
+ of the License, or (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program; if not, write to the Free Software
+ Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.
+ .
+ On Debian systems, the complete text of the GNU General
+ Public License version 2 can be found in "/usr/share/common-licenses/GPL-2".
+
 License: GPL-3.0+
  This program is free software: you can redistribute it and/or modify
  it under the terms of the GNU General Public License as published by
@@ -45,3 +85,4 @@
  .
  On Debian systems, the complete text of the GNU General
  Public License version 3 can be found in "/usr/share/common-licenses/GPL-3".
+

Modified: trunk/packages/hhsuite/trunk/debian/patches/Makefile
===================================================================
--- trunk/packages/hhsuite/trunk/debian/patches/Makefile	2012-02-22 13:27:26 UTC (rev 9752)
+++ trunk/packages/hhsuite/trunk/debian/patches/Makefile	2012-02-22 15:25:40 UTC (rev 9753)
@@ -1,3 +1,7 @@
+* make Makefile DESTDIR-aware
+* use $(MAKE) -C for making in subdirectories
+* fix install mode of data files
+* deinstall -> uninstall
 Index: hhsuite-2.0.12/Makefile
 ===================================================================
 --- hhsuite-2.0.12.orig/Makefile	2012-02-17 13:52:02.000000000 +0100

Modified: trunk/packages/hhsuite/trunk/debian/patches/default_path
===================================================================
--- trunk/packages/hhsuite/trunk/debian/patches/default_path	2012-02-22 13:27:26 UTC (rev 9752)
+++ trunk/packages/hhsuite/trunk/debian/patches/default_path	2012-02-22 15:25:40 UTC (rev 9753)
@@ -1,3 +1,4 @@
+* fix issues where the path in help pages is taken from the build-time location of the executables
 Index: hhsuite-2.0.12/lib/ffindex/src/ffindex_build.c
 ===================================================================
 --- hhsuite-2.0.12.orig/lib/ffindex/src/ffindex_build.c	2012-02-22 14:15:27.966982036 +0100


