[med-svn] [SCM] tophat annotated tag, upstream/1.4.0, created. upstream/1.4.0

[Carlos Borroto]

The annotated tag, upstream/1.4.0 has been created
        at  c8ac4d8b811ad57747d3d87d3dd36828ea4ebeae (tag)
   tagging  b911a2571a18bf8935c2d1e984d533ec2a968d61 (commit)
  replaces  upstream/1.3.3
 tagged by  Carlos Borroto
        on  Tue Jan 10 11:49:16 2012 -0500

- Shortlog ------------------------------------------------------------
Upstream version 1.4.0

Carlos Borroto (2):
      Imported Upstream version 1.3.3
      Imported Upstream version 1.4.0

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A spliced read mapper for RNA-Seq