[med-svn] [SCM] tabix branch, master, updated. debian/0.2.6-1-2-g938960e

Charles Plessy plessy at debian.org
Sat Jul 14 12:52:28 UTC 2012


The following commit has been merged in the master branch:
commit b8d4e98e74dab9d0ac3f5035290c14505ac24460
Author: Charles Plessy <plessy at debian.org>
Date:   Sat Jul 14 21:47:21 2012 +0900

    Indicate format to avoid stderr comment that makes autopkgtest fail.
    
    Closes: #680473
    LP: #1021500

diff --git a/debian/tests/with-example-data b/debian/tests/with-example-data
index 6af6ecf..b6aacd4 100755
--- a/debian/tests/with-example-data
+++ b/debian/tests/with-example-data
@@ -10,7 +10,7 @@ zcat /usr/share/doc/tabix/examples/example.gtf.gz > $TABIXDATA
 bgzip $TABIXDATA
 
 # Index with tabix
-tabix $TABIXDATA.gz
+tabix -p gff $TABIXDATA.gz
 
 # Extract with tabix the he features on chromosome 1 whose coordinates overlap
 # the interval 150,309–150,309.

-- 
Generic indexer for TAB-delimited genome position files.



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