[med-svn] [SCM] bowtie2 branch, master, updated. upstream/2.0.0-beta6-26-g3318120

[Alexandre Mestiashvili]

The following commit has been merged in the master branch:
commit 0f973db67421a63cfbb864ff7ca3be738e2f1920
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Fri Jun 1 21:36:55 2012 +0200

    normalized architecture detection
    so for example kfreebsd-amd64 is detected as an amd64 architecture
    and msse flag is set.(Previous commit was wrong)

diff --git a/debian/rules b/debian/rules
index 099300f..1a54834 100755
--- a/debian/rules
+++ b/debian/rules
@@ -1,7 +1,7 @@
 #!/usr/bin/make -f
 
 pkg := $(shell dpkg-parsechangelog | sed -n 's/^Source: //p')
-arch := $(shell dpkg-architecture -qDEB_HOST_ARCH 2>/dev/null | awk -F- '{print $1}')
+arch := $(shell dpkg-architecture -qDEB_HOST_ARCH 2>/dev/null | awk -F- '{print $$NF}')
 
 # ENABLE_SSE=0
 ifeq ($(arch),i386)

-- 
ultrafast memory-efficient short read aligner