[med-svn] r9842 - trunk/packages/clustalw-mpi/trunk/debian

[Andreas Tille]

Author: tille
Date: 2012-03-01 11:06:28 +0000 (Thu, 01 Mar 2012)
New Revision: 9842

Added:
   trunk/packages/clustalw-mpi/trunk/debian/upstream
Modified:
   trunk/packages/clustalw-mpi/trunk/debian/changelog
   trunk/packages/clustalw-mpi/trunk/debian/control
Log:
Add bibliographic information


Modified: trunk/packages/clustalw-mpi/trunk/debian/changelog
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/changelog	2012-03-01 10:52:44 UTC (rev 9841)
+++ trunk/packages/clustalw-mpi/trunk/debian/changelog	2012-03-01 11:06:28 UTC (rev 9842)
@@ -5,7 +5,9 @@
     - Updated Standards-Version to 3.9.3 (no changes needed)
     - Homepage has changed
     - Build-Depends: mpi-default-dev
+      Depends: mpi-default-bin
       Closes: #661740
+    - Depends ${misc:Depends}
   * debian/source/format: 3.0 (quilt)
   * Debhelper compat level 8 (control+compat)
   * debian/copyright: Fixed DEP5 issues using
@@ -16,6 +18,7 @@
   * debian/watch: Deleted because not working
   * debian/rules: Delete get-orig-source target because not working
     any more - source vanished
+  * debian/upstream: bibliographic information
 
  -- Andreas Tille <tille at debian.org>  Thu, 01 Mar 2012 11:41:19 +0100
 

Modified: trunk/packages/clustalw-mpi/trunk/debian/control
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/control	2012-03-01 10:52:44 UTC (rev 9841)
+++ trunk/packages/clustalw-mpi/trunk/debian/control	2012-03-01 11:06:28 UTC (rev 9842)
@@ -17,7 +17,7 @@
 Architecture: any
 Enhances: clustalw
 Suggests: seaview, clustalx
-Depends: ${shlibs:Depends}, lam-runtime
+Depends: ${shlibs:Depends}, ${misc:Depends}, mpi-default-bin
 Description: MPI-distributed global sequence alignment with ClustalW
  ClustalW is a popular tool for multiple sequence alignment. The
  alignment is achieved via three steps: pairwise alignment,

Added: trunk/packages/clustalw-mpi/trunk/debian/upstream
===================================================================
--- trunk/packages/clustalw-mpi/trunk/debian/upstream	                        (rev 0)
+++ trunk/packages/clustalw-mpi/trunk/debian/upstream	2012-03-01 11:06:28 UTC (rev 9842)
@@ -0,0 +1,14 @@
+Contact: Dr. Kuo-Bin Li <kbli at ym.edu.tw>
+Name: ClustalW-MPI
+Homepage: http://www.bii.a-star.edu.sg/achievements/applications/clustalw/
+Remark: The source is only available in a previous version (0.13) at the homepage
+Reference:
+  author: Kuo-Bin Li
+  title: "ClustalW-MPI: ClustalW Analysis Using Distributed and Parallel Computing"
+  journal: Bioinformatics
+  volume: 19
+  number: 12
+  pages: 1585-1586
+  year: 2003
+  DOI: 10.1093/bioinformatics/btg192
+  PMID: 12912844