[med-svn] [SCM] r-bioc-limma branch, meta, updated. meta/3.8.3-1-3-g292ea04
Charles Plessy
plessy at debian.org
Wed Mar 7 04:26:52 UTC 2012
The following commit has been merged in the meta branch:
commit 292ea049bc918a5ccd2b92f02d3abcf399baa3d0
Author: Charles Plessy <plessy at debian.org>
Date: Wed Mar 7 13:23:48 2012 +0900
Build and upload log for r-bioc-limma_3.10.3-1_amd64.changes.
diff --git a/amd64.changes b/amd64.changes
index 1ac7ca6..6690e33 100644
--- a/amd64.changes
+++ b/amd64.changes
@@ -2,11 +2,11 @@
Hash: SHA256
Format: 1.8
-Date: Fri, 04 Nov 2011 13:35:49 +0900
+Date: Wed, 07 Mar 2012 13:13:47 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: source amd64
-Version: 3.10.0-1
+Version: 3.10.3-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
@@ -14,40 +14,49 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.0-1) unstable; urgency=low
+ r-bioc-limma (3.10.3-1) unstable; urgency=low
.
- [eebb062] New upstream release (Bioconductor 2.9).
- [c1a8767] Include 7 digits of the commit ID in the changelog entry.
+ 0ddb00d New Upstream version.
+ .
+ [ Carlos Borroto ]
+ afe6f31 Fix for watch file.
+ .
+ [ Charles Plessy ]
+ 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
+ 4713d97 Obtain ${R:Depends} through r-base-dev.
+ 756a1da Conforms to Policy 3.9.3.
+ 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
+ 2db0d3d Verbose Debhelper.
Checksums-Sha1:
- b62723628f05c5a7a7d2f8b0ddca5fabad0cde8b 1986 r-bioc-limma_3.10.0-1.dsc
- cd3498439ab4ae8ca1fdce11126827978b275739 970029 r-bioc-limma_3.10.0.orig.tar.gz
- 511ce3b49d6d951c4176010c23e20fcf8354cafe 2332 r-bioc-limma_3.10.0-1.diff.gz
- bc917a9c12187c1ee141a1fc2f6b36b159d806aa 1469196 r-bioc-limma_3.10.0-1_amd64.deb
+ 597c62bc298878dc214ef14bdc082eb1135ceb1f 1995 r-bioc-limma_3.10.3-1.dsc
+ 2f3b66b4aa556abb79dda96fe7c7f2924ed315df 972612 r-bioc-limma_3.10.3.orig.tar.gz
+ e6c12bac2f123e2538b27dbf01f04b7f29cdb363 2738 r-bioc-limma_3.10.3-1.diff.gz
+ 1d22764e4372f52d34d41665804d3d8154598f6d 1472744 r-bioc-limma_3.10.3-1_amd64.deb
Checksums-Sha256:
- ea1e017ae647627190611237fc45573cab1e95ec3453e770b450cfdba17c79e5 1986 r-bioc-limma_3.10.0-1.dsc
- 4f8d8187ca963b0ad0726cd0ba473e58b60ae3ab19aa0cc777b44fc2f542e259 970029 r-bioc-limma_3.10.0.orig.tar.gz
- a75aabfe649c9560c7676d8c0f1004fbc44f621a67d0a827cfb1e11f2d9a6361 2332 r-bioc-limma_3.10.0-1.diff.gz
- aaba936884af7d83eb0d8c2edd597ec7117ed7d00c347924aff989ccf790c7b8 1469196 r-bioc-limma_3.10.0-1_amd64.deb
+ ced7505ca9670d04f5687857e928e6673dd6628581211252bcacb0b08784984d 1995 r-bioc-limma_3.10.3-1.dsc
+ 0431260bbd510a856218fc2a8b0181e83c48dc8a9089f2519f47c19d57bb1c55 972612 r-bioc-limma_3.10.3.orig.tar.gz
+ 1b60bcf1a2e1fc2c8c8a68c6da0aeb7d05154b512f93a465b0e7ca3c214fb2da 2738 r-bioc-limma_3.10.3-1.diff.gz
+ ea008699e4e0524d96a27d27a94258bc53d046218328bd6ec74f459bc5fd2175 1472744 r-bioc-limma_3.10.3-1_amd64.deb
Files:
- 8e44f7e3f72e6b9f45a6483b3609bb93 1986 gnu-r optional r-bioc-limma_3.10.0-1.dsc
- 2f05faeae7fb4fd451150e84c64469d6 970029 gnu-r optional r-bioc-limma_3.10.0.orig.tar.gz
- fa1a62e94c9fb182bf399b981c3c464f 2332 gnu-r optional r-bioc-limma_3.10.0-1.diff.gz
- cebdad829d4a74ecffd9ee0ed607e830 1469196 gnu-r optional r-bioc-limma_3.10.0-1_amd64.deb
+ 888f21a350e2b5b5d3e84d6628cee64c 1995 gnu-r optional r-bioc-limma_3.10.3-1.dsc
+ e0ede45f23425f0e5ac4beb66c2d3b2f 972612 gnu-r optional r-bioc-limma_3.10.3.orig.tar.gz
+ fc332d5247809d91edfb76b64878ac66 2738 gnu-r optional r-bioc-limma_3.10.3-1.diff.gz
+ c2f75d3913c43191b3561d63a9ab5003 1472744 gnu-r optional r-bioc-limma_3.10.3-1_amd64.deb
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diff --git a/amd64.log b/amd64.log
index 48e71a7..a372553 100644
--- a/amd64.log
+++ b/amd64.log
@@ -1,31 +1,68 @@
-sbuild (Debian sbuild) 0.62.5 (13 Jul 2011) on anx191
+sbuild (Debian sbuild) 0.62.6 (07 Dec 2011) on anx191
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.10.0-1 (amd64) 04 Nov 2011 13:43 ║
+║ r-bioc-limma 3.10.3-1 (amd64) 07 Mar 2012 13:14 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.10.0-1
-Source Version: 3.10.0-1
+Version: 3.10.3-1
+Source Version: 3.10.3-1
Distribution: unstable
Architecture: amd64
-I: NOTICE: Log filtering will replace 'build/r-bioc-limma-1eSCLB/r-bioc-limma-3.10.0' with '«PKGBUILDDIR»'
-I: NOTICE: Log filtering will replace 'build/r-bioc-limma-1eSCLB' with '«BUILDDIR»'
-I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-amd64-sbuild-e9c4716d-c2ff-4d26-83cd-64e3c629f46a' with '«CHROOT»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-uBqls4/r-bioc-limma-3.10.3' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-uBqls4' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-amd64-sbuild-706ea2f9-44a2-4b0f-937a-f6bd486fc7a0' with '«CHROOT»'
┌──────────────────────────────────────────────────────────────────────────────┐
│ Update chroot │
└──────────────────────────────────────────────────────────────────────────────┘
-Hit http://ftp.jp.debian.org sid InRelease
-Hit http://ftp.jp.debian.org sid/main amd64 Packages/DiffIndex
-Hit http://ftp.jp.debian.org sid/main TranslationIndex
+Get:1 http://ftp.jp.debian.org sid InRelease [197 kB]
+Get:2 http://ftp.jp.debian.org sid/main amd64 Packages/DiffIndex [3984 B]
+Get:3 http://ftp.jp.debian.org sid/main TranslationIndex [2154 B]
+Get:4 http://ftp.jp.debian.org sid/main amd64 2012-03-06-2016.18.pdiff [35.1 kB]
+Get:5 http://ftp.jp.debian.org sid/main amd64 2012-03-06-2016.18.pdiff [35.1 kB]
+Get:6 http://ftp.jp.debian.org sid/main Translation-en [3906 kB]
+Fetched 4144 kB in 1s (2344 kB/s)
Reading package lists...
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+The following packages will be upgraded:
+ apt tzdata
+2 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
+Need to get 2706 kB of archives.
+After this operation, 367 kB of additional disk space will be used.
+Get:1 http://ftp.jp.debian.org/debian/ sid/main apt amd64 0.8.15.10 [2232 kB]
+Get:2 http://ftp.jp.debian.org/debian/ sid/main tzdata all 2012b-1 [474 kB]
+debconf: delaying package configuration, since apt-utils is not installed
+Fetched 2706 kB in 0s (3669 kB/s)
+(Reading database ... 10885 files and directories currently installed.)
+Preparing to replace apt 0.8.15.9 (using .../apt_0.8.15.10_amd64.deb) ...
+Unpacking replacement apt ...
+Setting up apt (0.8.15.10) ...
+gpg: key F42584E6: "Lenny Stable Release Key <debian-release at lists.debian.org>" not changed
+gpg: key 55BE302B: "Debian Archive Automatic Signing Key (5.0/lenny) <ftpmaster at debian.org>" not changed
+gpg: key 6D849617: "Debian-Volatile Archive Automatic Signing Key (5.0/lenny)" not changed
+gpg: key B98321F9: "Squeeze Stable Release Key <debian-release at lists.debian.org>" not changed
+gpg: key 473041FA: "Debian Archive Automatic Signing Key (6.0/squeeze) <ftpmaster at debian.org>" not changed
+gpg: Total number processed: 5
+gpg: unchanged: 5
+gpg: checking the trustdb
+gpg: WARNING: digest algorithm MD5 is deprecated
+gpg: please see http://www.gnupg.org/faq/weak-digest-algos.html for more information
+gpg: no ultimately trusted keys found
+(Reading database ... 10886 files and directories currently installed.)
+Preparing to replace tzdata 2011n-2 (using .../tzdata_2012b-1_all.deb) ...
+Unpacking replacement tzdata ...
+Setting up tzdata (2012b-1) ...
+
+Current default time zone: 'Etc/UTC'
+Local time is now: Wed Mar 7 04:14:18 UTC 2012.
+Universal Time is now: Wed Mar 7 04:14:18 UTC 2012.
+Run 'dpkg-reconfigure tzdata' if you wish to change it.
+
┌──────────────────────────────────────────────────────────────────────────────┐
│ Fetch source files │
@@ -35,14 +72,14 @@ Reading state information...
Local sources
─────────────
-r-bioc-limma_3.10.0-1.dsc exists in .; copying to chroot
+r-bioc-limma_3.10.3-1.dsc exists in .; copying to chroot
Check arch
──────────
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
-dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-wJ6nxJ/apt_archive/sbuild-build-depends-core-dummy.deb'.
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-Fkbw6u/apt_archive/sbuild-build-depends-core-dummy.deb'.
OK
Reading package lists...
@@ -56,9 +93,9 @@ Building dependency tree...
Reading state information...
sbuild-build-depends-core-dummy is already the newest version.
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
-Merged Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.10.0)
-Filtered Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.10.0)
-dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-NiAcmH/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+Merged Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
+Filtered Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-Q9901d/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
OK
Reading package lists...
@@ -73,7 +110,7 @@ Reading state information...
The following extra packages will be installed:
cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base
gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
+ libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
@@ -81,22 +118,26 @@ The following extra packages will be installed:
libsm6 libthai-data libthai0 libtiff4 libtinfo-dev libunistring0 libx11-6
libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
+ r-base-dev tcl8.5 tk8.5 ttf-dejavu-core unzip x11-common xdg-utils zip
zlib1g-dev
Suggested packages:
devscripts dh-make curl defoma gettext-doc gfortran-multilib gfortran-doc
gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff ncurses-doc
ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
ttf-arphic-bkai00mp less www-browser libmail-box-perl r-doc-info r-doc-pdf
- r-mathlib r-base-html tclreadline gvfs-bin
+ r-mathlib r-base-html texlive-base texlive-latex-base
+ texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
+ texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
+ texi2html tclreadline gvfs-bin
Recommended packages:
autotools-dev patchutils autopoint libglib2.0-data shared-mime-info
x-ttcidfont-conf xml-core libmail-sendmail-perl r-recommended r-doc-html
- xterm x-terminal-emulator libfile-mimeinfo-perl x11-utils x11-xserver-utils
+ xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
cdbs debhelper dpatch file fontconfig fontconfig-config gettext gettext-base
gfortran gfortran-4.6 groff-base html2text intltool-debian libblas-dev
- libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
+ libblas3gf libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi5
libfontconfig1 libfreetype6 libgfortran3 libglib2.0-0 libice6 libjpeg8
libjpeg8-dev liblapack-dev liblapack3gf libmagic1 libncurses5-dev
libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
@@ -105,81 +146,121 @@ The following NEW packages will be installed:
libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
r-base-dev sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5
- ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
-debconf: delaying package configuration, since apt-utils is not installed
+ ttf-dejavu-core unzip x11-common xdg-utils zip zlib1g-dev
0 upgraded, 75 newly installed, 0 to remove and 0 not upgraded.
-Need to get 0 B/56.9 MB of archives.
-After this operation, 128 MB of additional disk space will be used.
+Need to get 38.4 MB/58.4 MB of archives.
+After this operation, 126 MB of additional disk space will be used.
+Get:1 http://ftp.jp.debian.org/debian/ sid/main libpipeline1 amd64 1.2.1-1 [39.2 kB]
+Get:2 http://ftp.jp.debian.org/debian/ sid/main libmagic1 amd64 5.10-1 [248 kB]
+Get:3 http://ftp.jp.debian.org/debian/ sid/main fontconfig-config all 2.8.0-3.1 [219 kB]
+Get:4 http://ftp.jp.debian.org/debian/ sid/main libfontconfig1 amd64 2.8.0-3.1 [283 kB]
+Get:5 http://ftp.jp.debian.org/debian/ sid/main libpixman-1-0 amd64 0.24.4-1 [406 kB]
+Get:6 http://ftp.jp.debian.org/debian/ sid/main libxcb1 amd64 1.8-2 [49.7 kB]
+Get:7 http://ftp.jp.debian.org/debian/ sid/main libxcb-render0 amd64 1.8-2 [18.3 kB]
+Get:8 http://ftp.jp.debian.org/debian/ sid/main libxcb-shm0 amd64 1.8-2 [10.0 kB]
+Get:9 http://ftp.jp.debian.org/debian/ sid/main libcairo2 amd64 1.10.2-7 [933 kB]
+Get:10 http://ftp.jp.debian.org/debian/ sid/main libglib2.0-0 amd64 2.30.2-6 [1846 kB]
+Get:11 http://ftp.jp.debian.org/debian/ sid/main libxml2 amd64 2.7.8.dfsg-7 [895 kB]
+Get:12 http://ftp.jp.debian.org/debian/ sid/main libcroco3 amd64 0.6.4-2 [150 kB]
+Get:13 http://ftp.jp.debian.org/debian/ sid/main libdatrie1 amd64 0.2.5-3 [28.6 kB]
+Get:14 http://ftp.jp.debian.org/debian/ sid/main libgfortran3 amd64 4.6.3-1 [358 kB]
+Get:15 http://ftp.jp.debian.org/debian/ sid/main x11-common all 1:7.6+12 [283 kB]
+Get:16 http://ftp.jp.debian.org/debian/ sid/main libjpeg8 amd64 8d-1 [134 kB]
+Get:17 http://ftp.jp.debian.org/debian/ sid/main libthai-data all 0.1.17-1 [205 kB]
+Get:18 http://ftp.jp.debian.org/debian/ sid/main libthai0 amd64 0.1.17-1 [44.8 kB]
+Get:19 http://ftp.jp.debian.org/debian/ sid/main fontconfig amd64 2.8.0-3.1 [335 kB]
+Get:20 http://ftp.jp.debian.org/debian/ sid/main libtiff4 amd64 3.9.6-1 [199 kB]
+Get:21 http://ftp.jp.debian.org/debian/ sid/main man-db amd64 2.6.1-1 [1057 kB]
+Get:22 http://ftp.jp.debian.org/debian/ sid/main file amd64 5.10-1 [53.0 kB]
+Get:23 http://ftp.jp.debian.org/debian/ sid/main cdbs all 0.4.105 [78.7 kB]
+Get:24 http://ftp.jp.debian.org/debian/ sid/main debhelper all 9.20120115 [693 kB]
+Get:25 http://ftp.jp.debian.org/debian/ sid/main dpatch all 2.0.35 [95.2 kB]
+Get:26 http://ftp.jp.debian.org/debian/ sid/main gfortran-4.6 amd64 4.6.3-1 [5564 kB]
+Get:27 http://ftp.jp.debian.org/debian/ sid/main gfortran amd64 4:4.6.2-4 [1130 B]
+Get:28 http://ftp.jp.debian.org/debian/ sid/main libbz2-dev amd64 1.0.6-1 [32.1 kB]
+Get:29 http://ftp.jp.debian.org/debian/ sid/main libjpeg8-dev amd64 8d-1 [242 kB]
+Get:30 http://ftp.jp.debian.org/debian/ sid/main zlib1g-dev amd64 1:1.2.6.dfsg-2 [213 kB]
+Get:31 http://ftp.jp.debian.org/debian/ sid/main libpng12-dev amd64 1.2.47-1 [267 kB]
+Get:32 http://ftp.jp.debian.org/debian/ sid/main libreadline6-dev amd64 6.2-8 [264 kB]
+Get:33 http://ftp.jp.debian.org/debian/ sid/main libreadline-dev amd64 6.2-8 [890 B]
+Get:34 http://ftp.jp.debian.org/debian/ sid/main xdg-utils all 1.1.0~rc1+git20111210-6 [83.7 kB]
+Get:35 http://ftp.jp.debian.org/debian/ sid/main tcl8.5 amd64 8.5.11-1 [1633 kB]
+Get:36 http://ftp.jp.debian.org/debian/ sid/main tk8.5 amd64 8.5.11-1 [1183 kB]
+Get:37 http://ftp.jp.debian.org/debian/ sid/main r-base-core amd64 2.14.2-1 [20.2 MB]
+Get:38 http://ftp.jp.debian.org/debian/ sid/main r-base-dev all 2.14.2-1 [3894 B]
+debconf: delaying package configuration, since apt-utils is not installed
+Fetched 38.4 MB in 5s (7003 kB/s)
Selecting previously unselected package libpipeline1.
-(Reading database ... 10887 files and directories currently installed.)
-Unpacking libpipeline1 (from .../libpipeline1_1.2.0-4_amd64.deb) ...
+(Reading database ... 10889 files and directories currently installed.)
+Unpacking libpipeline1 (from .../libpipeline1_1.2.1-1_amd64.deb) ...
+Selecting previously unselected package libmagic1.
+Unpacking libmagic1 (from .../libmagic1_5.10-1_amd64.deb) ...
Selecting previously unselected package libpcre3.
Unpacking libpcre3 (from .../libpcre3_8.12-4_amd64.deb) ...
-Selecting previously unselected package libglib2.0-0.
-Unpacking libglib2.0-0 (from .../libglib2.0-0_2.28.8-1_amd64.deb) ...
-Selecting previously unselected package libxml2.
-Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-5_amd64.deb) ...
-Selecting previously unselected package libcroco3.
-Unpacking libcroco3 (from .../libcroco3_0.6.2-2_amd64.deb) ...
-Selecting previously unselected package libdatrie1.
-Unpacking libdatrie1 (from .../libdatrie1_0.2.4-3_amd64.deb) ...
Selecting previously unselected package libexpat1.
Unpacking libexpat1 (from .../libexpat1_2.0.1-7.2_amd64.deb) ...
Selecting previously unselected package libfreetype6.
-Unpacking libfreetype6 (from .../libfreetype6_2.4.7-2_amd64.deb) ...
-Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu2_all.deb) ...
-Moving old data out of the way
+Unpacking libfreetype6 (from .../libfreetype6_2.4.8-1_amd64.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33-2_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.8.0-3.1_all.deb) ...
Selecting previously unselected package libfontconfig1.
-Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3_amd64.deb) ...
-Selecting previously unselected package libgfortran3.
-Unpacking libgfortran3 (from .../libgfortran3_4.6.2-3_amd64.deb) ...
-Selecting previously unselected package x11-common.
-Unpacking x11-common (from .../x11-common_1%3a7.6+9_all.deb) ...
-Selecting previously unselected package libice6.
-Unpacking libice6 (from .../libice6_2%3a1.0.7-2_amd64.deb) ...
+Unpacking libfontconfig1 (from .../libfontconfig1_2.8.0-3.1_amd64.deb) ...
Selecting previously unselected package libpixman-1-0.
-Unpacking libpixman-1-0 (from .../libpixman-1-0_0.23.8-1_amd64.deb) ...
+Unpacking libpixman-1-0 (from .../libpixman-1-0_0.24.4-1_amd64.deb) ...
Selecting previously unselected package libxau6.
-Unpacking libxau6 (from .../libxau6_1%3a1.0.6-3_amd64.deb) ...
+Unpacking libxau6 (from .../libxau6_1%3a1.0.6-4_amd64.deb) ...
Selecting previously unselected package libxdmcp6.
-Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-3_amd64.deb) ...
+Unpacking libxdmcp6 (from .../libxdmcp6_1%3a1.1.0-4_amd64.deb) ...
Selecting previously unselected package libxcb1.
-Unpacking libxcb1 (from .../libxcb1_1.7-3_amd64.deb) ...
+Unpacking libxcb1 (from .../libxcb1_1.8-2_amd64.deb) ...
Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-2_all.deb) ...
+Unpacking libx11-data (from .../libx11-data_2%3a1.4.4-4_all.deb) ...
Selecting previously unselected package libx11-6.
-Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-2_amd64.deb) ...
+Unpacking libx11-6 (from .../libx11-6_2%3a1.4.4-4_amd64.deb) ...
Selecting previously unselected package libxcb-render0.
-Unpacking libxcb-render0 (from .../libxcb-render0_1.7-3_amd64.deb) ...
+Unpacking libxcb-render0 (from .../libxcb-render0_1.8-2_amd64.deb) ...
Selecting previously unselected package libxcb-shm0.
-Unpacking libxcb-shm0 (from .../libxcb-shm0_1.7-3_amd64.deb) ...
+Unpacking libxcb-shm0 (from .../libxcb-shm0_1.8-2_amd64.deb) ...
Selecting previously unselected package libxrender1.
Unpacking libxrender1 (from .../libxrender1_1%3a0.9.6-2_amd64.deb) ...
Selecting previously unselected package libcairo2.
-Unpacking libcairo2 (from .../libcairo2_1.10.2-6.1_amd64.deb) ...
+Unpacking libcairo2 (from .../libcairo2_1.10.2-7_amd64.deb) ...
+Selecting previously unselected package libffi5.
+Unpacking libffi5 (from .../libffi5_3.0.10-3_amd64.deb) ...
+Selecting previously unselected package libglib2.0-0.
+Unpacking libglib2.0-0 (from .../libglib2.0-0_2.30.2-6_amd64.deb) ...
+Selecting previously unselected package libxml2.
+Unpacking libxml2 (from .../libxml2_2.7.8.dfsg-7_amd64.deb) ...
+Selecting previously unselected package libcroco3.
+Unpacking libcroco3 (from .../libcroco3_0.6.4-2_amd64.deb) ...
+Selecting previously unselected package libdatrie1.
+Unpacking libdatrie1 (from .../libdatrie1_0.2.5-3_amd64.deb) ...
+Selecting previously unselected package libgfortran3.
+Unpacking libgfortran3 (from .../libgfortran3_4.6.3-1_amd64.deb) ...
+Selecting previously unselected package x11-common.
+Unpacking x11-common (from .../x11-common_1%3a7.6+12_all.deb) ...
+Selecting previously unselected package libice6.
+Unpacking libice6 (from .../libice6_2%3a1.0.7-2_amd64.deb) ...
+Selecting previously unselected package libjpeg8.
+Unpacking libjpeg8 (from .../libjpeg8_8d-1_amd64.deb) ...
Selecting previously unselected package libthai-data.
-Unpacking libthai-data (from .../libthai-data_0.1.15-2_all.deb) ...
+Unpacking libthai-data (from .../libthai-data_0.1.17-1_all.deb) ...
Selecting previously unselected package libthai0.
-Unpacking libthai0 (from .../libthai0_0.1.15-2_amd64.deb) ...
+Unpacking libthai0 (from .../libthai0_0.1.17-1_amd64.deb) ...
Selecting previously unselected package libxft2.
Unpacking libxft2 (from .../libxft2_2.2.0-3_amd64.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.8.0-3_amd64.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.8.0-3.1_amd64.deb) ...
Selecting previously unselected package libpango1.0-0.
Unpacking libpango1.0-0 (from .../libpango1.0-0_1.29.4-2_amd64.deb) ...
Selecting previously unselected package libpcrecpp0.
Unpacking libpcrecpp0 (from .../libpcrecpp0_8.12-4_amd64.deb) ...
Selecting previously unselected package libsm6.
Unpacking libsm6 (from .../libsm6_2%3a1.2.0-2_amd64.deb) ...
-Selecting previously unselected package libjpeg8.
-Unpacking libjpeg8 (from .../libjpeg8_8c-2_amd64.deb) ...
Selecting previously unselected package libtiff4.
-Unpacking libtiff4 (from .../libtiff4_3.9.5-2_amd64.deb) ...
+Unpacking libtiff4 (from .../libtiff4_3.9.6-1_amd64.deb) ...
Selecting previously unselected package libunistring0.
Unpacking libunistring0 (from .../libunistring0_0.9.3-5_amd64.deb) ...
Selecting previously unselected package libxext6.
@@ -191,15 +272,13 @@ Unpacking libxt6 (from .../libxt6_1%3a1.1.1-2_amd64.deb) ...
Selecting previously unselected package groff-base.
Unpacking groff-base (from .../groff-base_1.21-6_amd64.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.0.2-2_amd64.deb) ...
-Selecting previously unselected package libmagic1.
-Unpacking libmagic1 (from .../libmagic1_5.09-2_amd64.deb) ...
+Unpacking man-db (from .../man-db_2.6.1-1_amd64.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../archives/file_5.09-2_amd64.deb) ...
+Unpacking file (from .../archives/file_5.10-1_amd64.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-5_amd64.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.99_all.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.105_all.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_amd64.deb) ...
Selecting previously unselected package gettext.
@@ -207,31 +286,31 @@ Unpacking gettext (from .../gettext_0.18.1.1-5_amd64.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
-Unpacking po-debconf (from .../po-debconf_1.0.16+nmu1_all.deb) ...
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_8.9.8_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20120115_all.deb) ...
Selecting previously unselected package dpatch.
-Unpacking dpatch (from .../archives/dpatch_2.0.33_all.deb) ...
+Unpacking dpatch (from .../archives/dpatch_2.0.35_all.deb) ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.2-3_amd64.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.3-1_amd64.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.1-3_amd64.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.2-4_amd64.deb) ...
Selecting previously unselected package libblas3gf.
Unpacking libblas3gf (from .../libblas3gf_1.2.20110419-2_amd64.deb) ...
Selecting previously unselected package libblas-dev.
Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-2_amd64.deb) ...
Selecting previously unselected package libbz2-dev.
-Unpacking libbz2-dev (from .../libbz2-dev_1.0.5-7_amd64.deb) ...
+Unpacking libbz2-dev (from .../libbz2-dev_1.0.6-1_amd64.deb) ...
Selecting previously unselected package libjpeg8-dev.
-Unpacking libjpeg8-dev (from .../libjpeg8-dev_8c-2_amd64.deb) ...
+Unpacking libjpeg8-dev (from .../libjpeg8-dev_8d-1_amd64.deb) ...
Selecting previously unselected package liblapack3gf.
Unpacking liblapack3gf (from .../liblapack3gf_3.3.1-1_amd64.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.3.1-1_amd64.deb) ...
Selecting previously unselected package libtinfo-dev.
-Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-3_amd64.deb) ...
+Unpacking libtinfo-dev (from .../libtinfo-dev_5.9-4_amd64.deb) ...
Selecting previously unselected package libncurses5-dev.
-Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-3_amd64.deb) ...
+Unpacking libncurses5-dev (from .../libncurses5-dev_5.9-4_amd64.deb) ...
Selecting previously unselected package libpaper1.
Unpacking libpaper1 (from .../libpaper1_1.1.24+nmu1_amd64.deb) ...
Selecting previously unselected package libpaper-utils.
@@ -239,121 +318,121 @@ Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu1_amd64.deb) ...
Selecting previously unselected package libpcre3-dev.
Unpacking libpcre3-dev (from .../libpcre3-dev_8.12-4_amd64.deb) ...
Selecting previously unselected package zlib1g-dev.
-Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.3.4.dfsg-3_amd64.deb) ...
+Unpacking zlib1g-dev (from .../zlib1g-dev_1%3a1.2.6.dfsg-2_amd64.deb) ...
Selecting previously unselected package libpng12-dev.
-Unpacking libpng12-dev (from .../libpng12-dev_1.2.46-3_amd64.deb) ...
+Unpacking libpng12-dev (from .../libpng12-dev_1.2.47-1_amd64.deb) ...
Selecting previously unselected package libreadline6-dev.
-Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-7_amd64.deb) ...
+Unpacking libreadline6-dev (from .../libreadline6-dev_6.2-8_amd64.deb) ...
Selecting previously unselected package libreadline-dev.
-Unpacking libreadline-dev (from .../libreadline-dev_6.2-7_amd64.deb) ...
+Unpacking libreadline-dev (from .../libreadline-dev_6.2-8_amd64.deb) ...
Selecting previously unselected package zip.
Unpacking zip (from .../archives/zip_3.0-4_amd64.deb) ...
Selecting previously unselected package unzip.
Unpacking unzip (from .../archives/unzip_6.0-5_amd64.deb) ...
Selecting previously unselected package xdg-utils.
-Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1-2_all.deb) ...
+Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-6_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.10-1_amd64.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.11-1_amd64.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.10-1_amd64.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.11-1_amd64.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_2.14.0-1_amd64.deb) ...
+Unpacking r-base-core (from .../r-base-core_2.14.2-1_amd64.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_2.14.0-1_all.deb) ...
+Unpacking r-base-dev (from .../r-base-dev_2.14.2-1_all.deb) ...
Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
-Setting up libpipeline1 (1.2.0-4) ...
+Setting up libpipeline1 (1.2.1-1) ...
+Setting up libmagic1 (5.10-1) ...
Setting up libpcre3 (8.12-4) ...
-Setting up libglib2.0-0 (2.28.8-1) ...
-No schema files found: doing nothing.
-Setting up libxml2 (2.7.8.dfsg-5) ...
-Setting up libcroco3 (0.6.2-2) ...
-Setting up libdatrie1 (0.2.4-3) ...
Setting up libexpat1 (2.0.1-7.2) ...
-Setting up libfreetype6 (2.4.7-2) ...
-Setting up ucf (3.0025+nmu2) ...
+Setting up libfreetype6 (2.4.8-1) ...
Setting up ttf-dejavu-core (2.33-2) ...
-Setting up fontconfig-config (2.8.0-3) ...
-Setting up libfontconfig1 (2.8.0-3) ...
-Setting up libgfortran3 (4.6.2-3) ...
-Setting up x11-common (1:7.6+9) ...
+Setting up fontconfig-config (2.8.0-3.1) ...
+Setting up libfontconfig1 (2.8.0-3.1) ...
+Setting up libpixman-1-0 (0.24.4-1) ...
+Setting up libxau6 (1:1.0.6-4) ...
+Setting up libxdmcp6 (1:1.1.0-4) ...
+Setting up libxcb1 (1.8-2) ...
+Setting up libx11-data (2:1.4.4-4) ...
+Setting up libx11-6 (2:1.4.4-4) ...
+Setting up libxcb-render0 (1.8-2) ...
+Setting up libxcb-shm0 (1.8-2) ...
+Setting up libxrender1 (1:0.9.6-2) ...
+Setting up libcairo2 (1.10.2-7) ...
+Setting up libffi5 (3.0.10-3) ...
+Setting up libglib2.0-0 (2.30.2-6) ...
+No schema files found: doing nothing.
+Setting up libxml2 (2.7.8.dfsg-7) ...
+Setting up libcroco3 (0.6.4-2) ...
+Setting up libdatrie1 (0.2.5-3) ...
+Setting up libgfortran3 (4.6.3-1) ...
+Setting up x11-common (1:7.6+12) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6 (2:1.0.7-2) ...
-Setting up libpixman-1-0 (0.23.8-1) ...
-Setting up libxau6 (1:1.0.6-3) ...
-Setting up libxdmcp6 (1:1.1.0-3) ...
-Setting up libxcb1 (1.7-3) ...
-Setting up libx11-data (2:1.4.4-2) ...
-Setting up libx11-6 (2:1.4.4-2) ...
-Setting up libxcb-render0 (1.7-3) ...
-Setting up libxcb-shm0 (1.7-3) ...
-Setting up libxrender1 (1:0.9.6-2) ...
-Setting up libcairo2 (1.10.2-6.1) ...
-Setting up libthai-data (0.1.15-2) ...
-Setting up libthai0 (0.1.15-2) ...
+Setting up libjpeg8 (8d-1) ...
+Setting up libthai-data (0.1.17-1) ...
+Setting up libthai0 (0.1.17-1) ...
Setting up libxft2 (2.2.0-3) ...
-Setting up fontconfig (2.8.0-3) ...
+Setting up fontconfig (2.8.0-3.1) ...
Cleaning up old fontconfig caches... done.
Regenerating fonts cache... done.
Setting up libpango1.0-0 (1.29.4-2) ...
Setting up libpcrecpp0 (8.12-4) ...
Setting up libsm6 (2:1.2.0-2) ...
-Setting up libjpeg8 (8c-2) ...
-Setting up libtiff4 (3.9.5-2) ...
+Setting up libtiff4 (3.9.6-1) ...
Setting up libunistring0 (0.9.3-5) ...
Setting up libxext6 (2:1.3.0-3) ...
Setting up libxss1 (1:1.2.1-2) ...
Setting up libxt6 (1:1.1.1-2) ...
Setting up groff-base (1.21-6) ...
-Setting up man-db (2.6.0.2-2) ...
+Setting up man-db (2.6.1-1) ...
Building database of manual pages ...
-Setting up libmagic1 (5.09-2) ...
-Setting up file (5.09-2) ...
+Setting up file (5.10-1) ...
Setting up gettext-base (0.18.1.1-5) ...
-Setting up cdbs (0.4.99) ...
+Setting up cdbs (0.4.105) ...
Setting up html2text (1.3.2a-15) ...
Setting up gettext (0.18.1.1-5) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
-Setting up po-debconf (1.0.16+nmu1) ...
-Setting up debhelper (8.9.8) ...
-Setting up dpatch (2.0.33) ...
-Setting up gfortran-4.6 (4.6.2-3) ...
-Setting up gfortran (4:4.6.1-3) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20120115) ...
+Setting up dpatch (2.0.35) ...
+Setting up gfortran-4.6 (4.6.3-1) ...
+Setting up gfortran (4:4.6.2-4) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode.
Setting up libblas3gf (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3gf to provide /usr/lib/libblas.so.3gf (libblas.so.3gf) in auto mode.
Setting up libblas-dev (1.2.20110419-2) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode.
-Setting up libbz2-dev (1.0.5-7) ...
-Setting up libjpeg8-dev (8c-2) ...
+Setting up libbz2-dev (1.0.6-1) ...
+Setting up libjpeg8-dev (8d-1) ...
Setting up liblapack3gf (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3gf to provide /usr/lib/liblapack.so.3gf (liblapack.so.3gf) in auto mode.
Setting up liblapack-dev (3.3.1-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode.
-Setting up libtinfo-dev (5.9-3) ...
-Setting up libncurses5-dev (5.9-3) ...
+Setting up libtinfo-dev (5.9-4) ...
+Setting up libncurses5-dev (5.9-4) ...
Setting up libpaper1 (1.1.24+nmu1) ...
Creating config file /etc/papersize with new version
Setting up libpaper-utils (1.1.24+nmu1) ...
Setting up libpcre3-dev (8.12-4) ...
-Setting up zlib1g-dev (1:1.2.3.4.dfsg-3) ...
-Setting up libpng12-dev (1.2.46-3) ...
-Setting up libreadline6-dev (6.2-7) ...
-Setting up libreadline-dev (6.2-7) ...
+Setting up zlib1g-dev (1:1.2.6.dfsg-2) ...
+Setting up libpng12-dev (1.2.47-1) ...
+Setting up libreadline6-dev (6.2-8) ...
+Setting up libreadline-dev (6.2-8) ...
Setting up zip (3.0-4) ...
Setting up unzip (6.0-5) ...
-Setting up xdg-utils (1.1.0~rc1-2) ...
-Setting up tcl8.5 (8.5.10-1) ...
+Setting up xdg-utils (1.1.0~rc1+git20111210-6) ...
+Setting up tcl8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode.
-Setting up tk8.5 (8.5.10-1) ...
+Setting up tk8.5 (8.5.11-1) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode.
-Setting up r-base-core (2.14.0-1) ...
+Setting up r-base-core (2.14.2-1) ...
Setting R_PAPERSIZE_USER default to 'a4'
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (2.14.0-1) ...
+Setting up r-base-dev (2.14.2-1) ...
Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -361,8 +440,8 @@ Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
└──────────────────────────────────────────────────────────────────────────────┘
Kernel: Linux 2.6.39-bpo.2-amd64 amd64 (x86_64)
-Toolchain package versions: binutils_2.21.90.20111025-1 dpkg-dev_1.16.1.1 g++-4.6_4.6.2-3 gcc-4.6_4.6.2-3 libc6-dev_2.13-21 libstdc++6_4.6.2-3 libstdc++6-4.6-dev_4.6.2-3 linux-libc-dev_3.0.0-6
-Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binutils_2.21.90.20111025-1 bsdmainutils_8.2.3 bsdutils_1:2.19.1-5 build-essential_11.5 bzip2_1.0.5-7 cdbs_0.4.99 coreutils_8.13-3 cpp_4:4.6.1-3 cpp-4.6_4.6.2-3 dash_0.5.7-2 debconf_1.5.41 debconf-i18n_1.5.41 debfoster_2.7-1.1 debhelper_8.9.8 debian-archive-keyring_2010.08.28 debianutils_4.0.4 diffutils_1:3.2-1 dpatch_2.0.33 dpkg_1.16.1.1 dpkg-dev_1.16.1.1 e2fslibs_1.42~WIP-2011-10-16-1 e2fsprogs_1.42~WIP-2011-10-16-1 fakeroot_1.18.1-1 file_5.09-2 findutils_4.4.2-1+b1 fontconfig_2.8.0-3 fontconfig-config_2.8.0-3 g++_4:4.6.1-3 g++-4.6_4.6.2-3 gcc_4:4.6.1-3 gcc-4.6_4.6.2-3 gcc-4.6-base_4.6.2-3 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.1-3 gfortran-4.6_4.6.2-3 gnupg_1.4.11-3 gpgv_1.4.11-3 grep_2.9-2 groff-base_1.21-6 gzip_1.4-1 hostname_3.06 html2text_1.3.2a-15 initscripts_2.88dsf-13.13 insserv_1.14.0-2.1 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-3 libattr1_1:2.4.46-3 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.19.1-5 libbz2-1.0_1.0.5-7 libbz2-dev_1.0.5-7 libc-bin_2.13-21 libc-dev-bin_2.13-21 libc6_2.13-21 libc6-dev_2.13-21 libcairo2_1.10.2-6.1 libclass-isa-perl_0.36-2 libcomerr2_1.42~WIP-2011-10-16-1 libcroco3_0.6.2-2 libdatrie1_0.2.4-3 libdb5.1_5.1.25-11 libdpkg-perl_1.16.1.1 libexpat1_2.0.1-7.2 libfontconfig1_2.8.0-3 libfreetype6_2.4.7-2 libgc1c2_1:7.1-8 libgcc1_1:4.6.2-3 libgdbm3_1.8.3-10 libgfortran3_4.6.2-3 libglib2.0-0_2.28.8-1 libgmp10_2:5.0.2+dfsg-2 libgomp1_4.6.2-3 libgpm2_1.20.4-4 libice6_2:1.0.7-2 libjpeg8_8c-2 libjpeg8-dev_8c-2 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblocale-gettext-perl_1.05-7 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.09-2 libmount1_2.19.1-5 libmpc2_0.9-4 libmpfr4_3.1.0-2 libncurses5_5.9-3 libncurses5-dev_5.9-3 libpam-modules_1.1.3-5 libpam-modules-bin_1.1.3-5 libpam-runtime_1.1.3-5 libpam0g_1.1.3-5 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.0-4 libpixman-1-0_0.23.8-1 libpng12-0_1.2.46-3 libpng12-dev_1.2.46-3 libpod-plainer-perl_1.03-1 libquadmath0_4.6.2-3 libreadline-dev_6.2-7 libreadline6_6.2-7 libreadline6-dev_6.2-7 libselinux1_2.1.0-4 libsepol1_2.1.0-1.1 libslang2_2.2.4-3 libsm6_2:1.2.0-2 libss2_1.42~WIP-2011-10-16-1 libstdc++6_4.6.2-3 libstdc++6-4.6-dev_4.6.2-3 libswitch-perl_2.16-2 libtext-charwidth-perl_0.04-7 libtext-iconv-perl_1.7-4 libtext-wrapi18n-perl_0.06-7 libthai-data_0.1.15-2 libthai0_0.1.15-2 libtiff4_3.9.5-2 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-3 libtinfo5_5.9-3 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-19 libuuid1_2.19.1-5 libx11-6_2:1.4.4-2 libx11-data_2:1.4.4-2 libxau6_1:1.0.6-3 libxcb-render0_1.7-3 libxcb-shm0_1.7-3 libxcb1_1.7-3 libxdmcp6_1:1.1.0-3 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-5 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.0.0-6 login_1:4.1.4.2+svn3283-3 lsb-base_3.2-28 make_3.81-8.1 man-db_2.6.0.2-2 mawk_1.3.3-16 mount_2.19.1-5 multiarch-support_2.13-21 ncurses-base_5.9-3 ncurses-bin_5.9-3 passwd_1:4.1.4.2+svn3283-3 patch_2.6.1-2 perl_5.12.4-6 perl-base_5.12.4-6 perl-modules_5.12.4-6 po-debconf_1.0.16+nmu1 r-base-core_2.14.0-1 r-base-dev_2.14.0-1 readline-common_6.2-7 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-limma-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-13.13 sysvinit_2.88dsf-13.13 sysvinit-utils_2.88dsf-13.13 tar_1.26-2 tcl8.5_8.5.10-1 tk8.5_8.5.10-1 ttf-dejavu-core_2.33-2 tzdata_2011n-1 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.19.1-5 x11-common_1:7.6+9 xdg-utils_1.1.0~rc1-2 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.3.4.dfsg-3 zlib1g-dev_1:1.2.3.4.dfsg-3
+Toolchain package versions: binutils_2.22-5 dpkg-dev_1.16.1.2 g++-4.6_4.6.3-1 gcc-4.6_4.6.3-1 libc6-dev_2.13-27 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 linux-libc-dev_3.2.9-1
+Package versions: apt_0.8.15.10 base-files_6.7 base-passwd_3.5.24 bash_4.2-1 binutils_2.22-5 bsdmainutils_9.0.1 bsdutils_1:2.20.1-4 build-essential_11.5 bzip2_1.0.6-1 cdbs_0.4.105 coreutils_8.13-3 cpp_4:4.6.2-4 cpp-4.6_4.6.3-1 dash_0.5.7-3 debconf_1.5.41 debfoster_2.7-1.1 debhelper_9.20120115 debian-archive-keyring_2010.08.28 debianutils_4.2.1 diffutils_1:3.2-2 dpatch_2.0.35 dpkg_1.16.1.2 dpkg-dev_1.16.1.2 e2fslibs_1.42.1-2 e2fsprogs_1.42.1-2 fakeroot_1.18.2-1 file_5.10-1 findutils_4.4.2-4 fontconfig_2.8.0-3.1 fontconfig-config_2.8.0-3.1 g++_4:4.6.2-4 g++-4.6_4.6.3-1 gcc_4:4.6.2-4 gcc-4.6_4.6.3-1 gcc-4.6-base_4.6.3-1 gettext_0.18.1.1-5 gettext-base_0.18.1.1-5 gfortran_4:4.6.2-4 gfortran-4.6_4.6.3-1 gnupg_1.4.12-3 gpgv_1.4.12-3 grep_2.10-1 groff-base_1.21-6 gzip_1.4-3 hostname_3.11 html2text_1.3.2a-15 initscripts_2.88dsf-22 insserv_1.14.0-2.2 intltool-debian_0.35.0+20060710.1 libacl1_2.2.51-5 libattr1_1:2.4.46-5 libblas-dev_1.2.20110419-2 libblas3gf_1.2.20110419-2 libblkid1_2.20.1-4 libbz2-1.0_1.0.6-1 libbz2-dev_1.0.6-1 libc-bin_2.13-27 libc-dev-bin_2.13-27 libc6_2.13-27 libc6-dev_2.13-27 libcairo2_1.10.2-7 libclass-isa-perl_0.36-3 libcomerr2_1.42.1-2 libcroco3_0.6.4-2 libdatrie1_0.2.5-3 libdb5.1_5.1.29-1 libdpkg-perl_1.16.1.2 libexpat1_2.0.1-7.2 libffi5_3.0.10-3 libfontconfig1_2.8.0-3.1 libfreetype6_2.4.8-1 libgc1c2_1:7.1-8 libgcc1_1:4.6.3-1 libgdbm3_1.8.3-10 libgfortran3_4.6.3-1 libglib2.0-0_2.30.2-6 libgmp10_2:5.0.4+dfsg-1 libgomp1_4.6.3-1 libgpm2_1.20.4-4 libice6_2:1.0.7-2 libjpeg8_8d-1 libjpeg8-dev_8d-1 liblapack-dev_3.3.1-1 liblapack3gf_3.3.1-1 liblzma2_5.1.1alpha+20110809-2 liblzma5_5.1.1alpha+20110809-3 libmagic1_5.10-1 libmount1_2.20.1-4 libmpc2_0.9-4 libmpfr4_3.1.0-4 libncurses5_5.9-4 libncurses5-dev_5.9-4 libpam-modules_1.1.3-7 libpam-modules-bin_1.1.3-7 libpam-runtime_1.1.3-7 libpam0g_1.1.3-7 libpango1.0-0_1.29.4-2 libpaper-utils_1.1.24+nmu1 libpaper1_1.1.24+nmu1 libpcre3_8.12-4 libpcre3-dev_8.12-4 libpcrecpp0_8.12-4 libpipeline1_1.2.1-1 libpixman-1-0_0.24.4-1 libpng12-0_1.2.47-1 libpng12-dev_1.2.47-1 libpod-plainer-perl_1.03-1 libquadmath0_4.6.3-1 libreadline-dev_6.2-8 libreadline6_6.2-8 libreadline6-dev_6.2-8 libselinux1_2.1.9-2 libsemanage-common_2.1.6-2 libsemanage1_2.1.6-2 libsepol1_2.1.4-1 libslang2_2.2.4-6 libsm6_2:1.2.0-2 libss2_1.42.1-2 libstdc++6_4.6.3-1 libstdc++6-4.6-dev_4.6.3-1 libswitch-perl_2.16-2 libthai-data_0.1.17-1 libthai0_0.1.17-1 libtiff4_3.9.6-1 libtimedate-perl_1.2000-1 libtinfo-dev_5.9-4 libtinfo5_5.9-4 libunistring0_0.9.3-5 libusb-0.1-4_2:0.1.12-20 libustr-1.0-1_1.0.4-2 libuuid1_2.20.1-4 libx11-6_2:1.4.4-4 libx11-data_2:1.4.4-4 libxau6_1:1.0.6-4 libxcb-render0_1.8-2 libxcb-shm0_1.8-2 libxcb1_1.8-2 libxdmcp6_1:1.1.0-4 libxext6_2:1.3.0-3 libxft2_2.2.0-3 libxml2_2.7.8.dfsg-7 libxrender1_1:0.9.6-2 libxss1_1:1.2.1-2 libxt6_1:1.1.1-2 linux-libc-dev_3.2.9-1 login_1:4.1.5-1 lsb-base_3.2+Debian30 make_3.81-8.1 man-db_2.6.1-1 mawk_1.3.3-16 mount_2.20.1-4 multiarch-support_2.13-27 ncurses-base_5.9-4 ncurses-bin_5.9-4 passwd_1:4.1.5-1 patch_2.6.1-3 perl_5.14.2-9 perl-base_5.14.2-9 perl-modules_5.14.2-9 po-debconf_1.0.16+nmu2 r-base-core_2.14.2-1 r-base-dev_2.14.2-1 readline-common_6.2-8 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-bioc-limma-dummy_0.invalid.0 sed_4.2.1-9 sensible-utils_0.0.6 sysv-rc_2.88dsf-22 sysvinit_2.88dsf-22 sysvinit-utils_2.88dsf-22 tar_1.26-4 tcl8.5_8.5.11-1 tk8.5_8.5.11-1 ttf-dejavu-core_2.33-2 tzdata_2012b-1 ucf_3.0025+nmu2 unzip_6.0-5 util-linux_2.20.1-4 x11-common_1:7.6+12 xdg-utils_1.1.0~rc1+git20111210-6 xz-utils_5.1.1alpha+20110809-3 zip_3.0-4 zlib1g_1:1.2.6.dfsg-2 zlib1g-dev_1:1.2.6.dfsg-2
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -372,10 +451,10 @@ Package versions: apt_0.8.15.9 base-files_6.5 base-passwd_3.5.23 bash_4.1-3 binu
Unpack source
─────────────
-dpkg-source: warning: extracting unsigned source package (r-bioc-limma_3.10.0-1.dsc)
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.0
-dpkg-source: info: unpacking r-bioc-limma_3.10.0.orig.tar.gz
-dpkg-source: info: applying r-bioc-limma_3.10.0-1.diff.gz
+dpkg-source: warning: extracting unsigned source package (r-bioc-limma_3.10.3-1.dsc)
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.10.3
+dpkg-source: info: unpacking r-bioc-limma_3.10.3.orig.tar.gz
+dpkg-source: info: applying r-bioc-limma_3.10.3-1.diff.gz
Check disc space
────────────────
@@ -392,7 +471,7 @@ SCHROOT_CHROOT_NAME=sid-amd64-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=1000
SCHROOT_GROUP=charles
-SCHROOT_SESSION_ID=sid-amd64-sbuild-e9c4716d-c2ff-4d26-83cd-64e3c629f46a
+SCHROOT_SESSION_ID=sid-amd64-sbuild-706ea2f9-44a2-4b0f-937a-f6bd486fc7a0
SCHROOT_UID=31051
SCHROOT_USER=charles
SHELL=/bin/sh
@@ -404,9 +483,9 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.10.0-1
+dpkg-buildpackage: source version 3.10.3-1
dpkg-buildpackage: source changed by Charles Plessy <plessy at debian.org>
- dpkg-source --before-build r-bioc-limma-3.10.0
+ dpkg-source --before-build r-bioc-limma-3.10.3
dpkg-buildpackage: host architecture amd64
fakeroot debian/rules clean
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
@@ -427,17 +506,30 @@ for dir in debian/patches ; do \
rm -f $dir/*.log ; \
done
dh_clean
+ rm -f debian/r-bioc-limma.substvars
+ rm -f debian/r-bioc-limma.*.debhelper
+ rm -rf debian/r-bioc-limma/
+ rm -f debian/*.debhelper.log
+ rm -f debian/files
+ find . \( \( -type f -a \
+ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
+ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
+ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
+ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
+ \) -exec rm -f {} \; \) -o \
+ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
+ rm -f *-stamp
if test -d src; then \
find src -regex ".*\..*o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- dpkg-source -b r-bioc-limma-3.10.0
+ dpkg-source -b r-bioc-limma-3.10.3
dpkg-source: warning: no source format specified in debian/source/format, see dpkg-source(1)
dpkg-source: info: using source format `1.0'
-dpkg-source: info: building r-bioc-limma using existing r-bioc-limma_3.10.0.orig.tar.gz
-dpkg-source: info: building r-bioc-limma in r-bioc-limma_3.10.0-1.diff.gz
-dpkg-source: info: building r-bioc-limma in r-bioc-limma_3.10.0-1.dsc
+dpkg-source: info: building r-bioc-limma using existing r-bioc-limma_3.10.3.orig.tar.gz
+dpkg-source: info: building r-bioc-limma in r-bioc-limma_3.10.3-1.diff.gz
+dpkg-source: info: building r-bioc-limma in r-bioc-limma_3.10.3-1.dsc
debian/rules build
/usr/share/cdbs/1/rules/simple-patchsys.mk:31: WARNING: simple-patchsys.mk is deprecated - please use source format 3.0 (quilt) instead
test -x debian/rules
@@ -462,9 +554,15 @@ make[1]: Leaving directory `/«PKGBUILDDIR»'
test -x debian/rules
dh_testroot
dh_prep
+ rm -f debian/r-bioc-limma.substvars
+ rm -f debian/r-bioc-limma.*.debhelper
+ rm -rf debian/r-bioc-limma/
dh_installdirs -A
+ install -d debian/r-bioc-limma
mkdir -p "."
dh_installdirs usr/lib/R/site-library
+ install -d debian/r-bioc-limma/usr/lib/R/site-library
+echo "R:Depends=r-base-core (>= 2.14.2-1)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
@@ -505,8 +603,10 @@ if test -f debian/overrides; then \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
-echo "R:Depends=r-base-core (>= 2.14.0~)" >> debian/r-bioc-limma.substvars
dh_installdocs -pr-bioc-limma
+ install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
+ install -g 0 -o 0 -m 644 -p debian/README.Debian debian/r-bioc-limma/usr/share/doc/r-bioc-limma/README.Debian
+ install -g 0 -o 0 -m 644 -p debian/copyright debian/r-bioc-limma/usr/share/doc/r-bioc-limma/copyright
dh_installexamples -pr-bioc-limma
dh_installman -pr-bioc-limma
dh_installinfo -pr-bioc-limma
@@ -514,12 +614,17 @@ dh_installmenu -pr-bioc-limma
dh_installcron -pr-bioc-limma
dh_installinit -pr-bioc-limma
dh_installdebconf -pr-bioc-limma
+ install -o 0 -g 0 -d debian/r-bioc-limma/DEBIAN
dh_installemacsen -pr-bioc-limma
dh_installcatalogs -pr-bioc-limma
+ grep -s -v '^misc:Depends=' debian/r-bioc-limma.substvars > debian/r-bioc-limma.substvars.new || true
+ mv debian/r-bioc-limma.substvars.new debian/r-bioc-limma.substvars
dh_installpam -pr-bioc-limma
dh_installlogrotate -pr-bioc-limma
dh_installlogcheck -pr-bioc-limma
dh_installchangelogs -pr-bioc-limma inst/doc/changelog.txt
+ install -o 0 -g 0 -p -m644 debian/changelog debian/r-bioc-limma/usr/share/doc/r-bioc-limma/changelog.Debian
+ install -o 0 -g 0 -p -m644 inst/doc/changelog.txt debian/r-bioc-limma/usr/share/doc/r-bioc-limma/changelog
dh_installudev -pr-bioc-limma
dh_lintian -pr-bioc-limma
dh_bugfiles -pr-bioc-limma
@@ -528,22 +633,48 @@ dh_link -pr-bioc-limma
dh_installmime -pr-bioc-limma
dh_installgsettings -pr-bioc-limma
dh_strip -pr-bioc-limma
+ strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
+ cd debian/r-bioc-limma
+ chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
+ find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
+ find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
+ find debian/r-bioc-limma/usr/share/doc -type f ! -regex 'debian/r-bioc-limma/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 644
+ find debian/r-bioc-limma/usr/share/doc -type d -print0 2>/dev/null | xargs -0r chmod 755
+ find debian/r-bioc-limma/usr/share/man debian/r-bioc-limma/usr/man/ debian/r-bioc-limma/usr/X11*/man/ -type f -print0 2>/dev/null | xargs -0r chmod 644
+ find debian/r-bioc-limma -perm -5 -type f \( -name '*.so.*' -or -name '*.so' -or -name '*.la' -or -name '*.a' \) -print0 2>/dev/null | xargs -0r chmod 644
+ find debian/r-bioc-limma/usr/include -type f -print0 2>/dev/null | xargs -0r chmod 644
+ find debian/r-bioc-limma/usr/share/applications -type f -print0 2>/dev/null | xargs -0r chmod 644
+ find debian/r-bioc-limma -perm -5 -type f \( -name '*.cmxs' \) -print0 2>/dev/null | xargs -0r chmod 644
+ find debian/r-bioc-limma/usr/lib/perl5 debian/r-bioc-limma/usr/share/perl5 -type f -perm -5 -name '*.pm' -print0 2>/dev/null | xargs -0r chmod a-X
+ find debian/r-bioc-limma/usr/lib -type f -name '*.ali' -print0 2>/dev/null | xargs -0r chmod uga-w
dh_makeshlibs -pr-bioc-limma
+ rm -f debian/r-bioc-limma/DEBIAN/shlibs
dh_installdeb -pr-bioc-limma
dh_perl -pr-bioc-limma
dh_shlibdeps -pr-bioc-limma
+ dpkg-shlibdeps -Tdebian/r-bioc-limma.substvars debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_gencontrol -pr-bioc-limma
+ echo misc:Depends= >> debian/r-bioc-limma.substvars
+ dpkg-gencontrol -ldebian/changelog -Tdebian/r-bioc-limma.substvars -Pdebian/r-bioc-limma
+ chmod 644 debian/r-bioc-limma/DEBIAN/control
+ chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
+ (cd debian/r-bioc-limma >/dev/null ; find . -type f ! -regex '.*/DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
+ chmod 644 debian/r-bioc-limma/DEBIAN/md5sums
+ chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.0-1_amd64.deb'.
- dpkg-genchanges >../r-bioc-limma_3.10.0-1_amd64.changes
+ dpkg-deb --build debian/r-bioc-limma ..
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.10.3-1_amd64.deb'.
+ dpkg-genchanges >../r-bioc-limma_3.10.3-1_amd64.changes
dpkg-genchanges: including full source code in upload
- dpkg-source --after-build r-bioc-limma-3.10.0
+ dpkg-source --after-build r-bioc-limma-3.10.3
dpkg-buildpackage: full upload (original source is included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20111104-1344
+Build finished at 20120307-1314
Finished
────────
@@ -555,15 +686,15 @@ I: Built successfully
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.0-1_amd64.changes:
+r-bioc-limma_3.10.3-1_amd64.changes:
────────────────────────────────────
Format: 1.8
-Date: Fri, 04 Nov 2011 13:35:49 +0900
+Date: Wed, 07 Mar 2012 13:13:47 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: source amd64
-Version: 3.10.0-1
+Version: 3.10.3-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
@@ -571,44 +702,53 @@ Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.10.0-1) unstable; urgency=low
+ r-bioc-limma (3.10.3-1) unstable; urgency=low
+ .
+ 0ddb00d New Upstream version.
.
- [eebb062] New upstream release (Bioconductor 2.9).
- [c1a8767] Include 7 digits of the commit ID in the changelog entry.
+ [ Carlos Borroto ]
+ afe6f31 Fix for watch file.
+ .
+ [ Charles Plessy ]
+ 7ef2264 Removing inst/doc/usersguide.pdf, as its source is missing.
+ 4713d97 Obtain ${R:Depends} through r-base-dev.
+ 756a1da Conforms to Policy 3.9.3.
+ 68495e3 Renamed debian/upstream-metadata.yaml to debian/upstream.
+ 2db0d3d Verbose Debhelper.
Checksums-Sha1:
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- cd3498439ab4ae8ca1fdce11126827978b275739 970029 r-bioc-limma_3.10.0.orig.tar.gz
- 511ce3b49d6d951c4176010c23e20fcf8354cafe 2332 r-bioc-limma_3.10.0-1.diff.gz
- bc917a9c12187c1ee141a1fc2f6b36b159d806aa 1469196 r-bioc-limma_3.10.0-1_amd64.deb
+ d86180a26aa4449e64c7b3189c6beee779390c0e 1109 r-bioc-limma_3.10.3-1.dsc
+ 2f3b66b4aa556abb79dda96fe7c7f2924ed315df 972612 r-bioc-limma_3.10.3.orig.tar.gz
+ e6c12bac2f123e2538b27dbf01f04b7f29cdb363 2738 r-bioc-limma_3.10.3-1.diff.gz
+ 1d22764e4372f52d34d41665804d3d8154598f6d 1472744 r-bioc-limma_3.10.3-1_amd64.deb
Checksums-Sha256:
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- 4f8d8187ca963b0ad0726cd0ba473e58b60ae3ab19aa0cc777b44fc2f542e259 970029 r-bioc-limma_3.10.0.orig.tar.gz
- a75aabfe649c9560c7676d8c0f1004fbc44f621a67d0a827cfb1e11f2d9a6361 2332 r-bioc-limma_3.10.0-1.diff.gz
- aaba936884af7d83eb0d8c2edd597ec7117ed7d00c347924aff989ccf790c7b8 1469196 r-bioc-limma_3.10.0-1_amd64.deb
+ deb1a06374af7abb68fec3e7c88868d523ea2bec66d3f9c07c3ba8d911028cc1 1109 r-bioc-limma_3.10.3-1.dsc
+ 0431260bbd510a856218fc2a8b0181e83c48dc8a9089f2519f47c19d57bb1c55 972612 r-bioc-limma_3.10.3.orig.tar.gz
+ 1b60bcf1a2e1fc2c8c8a68c6da0aeb7d05154b512f93a465b0e7ca3c214fb2da 2738 r-bioc-limma_3.10.3-1.diff.gz
+ ea008699e4e0524d96a27d27a94258bc53d046218328bd6ec74f459bc5fd2175 1472744 r-bioc-limma_3.10.3-1_amd64.deb
Files:
- 1753c162ce442246858bc8355117799b 1100 gnu-r optional r-bioc-limma_3.10.0-1.dsc
- 2f05faeae7fb4fd451150e84c64469d6 970029 gnu-r optional r-bioc-limma_3.10.0.orig.tar.gz
- fa1a62e94c9fb182bf399b981c3c464f 2332 gnu-r optional r-bioc-limma_3.10.0-1.diff.gz
- cebdad829d4a74ecffd9ee0ed607e830 1469196 gnu-r optional r-bioc-limma_3.10.0-1_amd64.deb
+ 61f760bb88827467598c5f32571fd220 1109 gnu-r optional r-bioc-limma_3.10.3-1.dsc
+ e0ede45f23425f0e5ac4beb66c2d3b2f 972612 gnu-r optional r-bioc-limma_3.10.3.orig.tar.gz
+ fc332d5247809d91edfb76b64878ac66 2738 gnu-r optional r-bioc-limma_3.10.3-1.diff.gz
+ c2f75d3913c43191b3561d63a9ab5003 1472744 gnu-r optional r-bioc-limma_3.10.3-1_amd64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.10.0-1_amd64.deb
+r-bioc-limma_3.10.3-1_amd64.deb
───────────────────────────────
new debian package, version 2.0.
- size 1469196 bytes: control archive= 1542 bytes.
- 770 bytes, 16 lines control
- 2297 bytes, 30 lines md5sums
+ size 1472744 bytes: control archive= 1572 bytes.
+ 771 bytes, 16 lines control
+ 2372 bytes, 31 lines md5sums
Package: r-bioc-limma
- Version: 3.10.0-1
+ Version: 3.10.3-1
Architecture: amd64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1671
- Depends: libc6 (>= 2.2.5), r-base-core (>= 2.14.0~)
+ Installed-Size: 1677
+ Depends: libc6 (>= 2.2.5), r-base-core (>= 2.14.2-1)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -620,51 +760,52 @@ r-bioc-limma_3.10.0-1_amd64.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/lib/
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/lib/R/
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/lib/R/site-library/limma/
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 197369 2011-11-04 13:44 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 3776 2011-11-04 13:44 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 383 2011-11-04 13:44 ./usr/lib/R/site-library/limma/R/limma
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 451815 2011-11-04 13:44 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 6221 2011-11-04 13:44 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 3260 2011-11-04 13:44 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 2392 2011-11-04 13:44 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 1301 2011-11-04 13:44 ./usr/lib/R/site-library/limma/help/paths.rds
--rwxr-xr-x root/root 1230 2011-11-04 13:44 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 1901 2011-11-04 13:44 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 34556 2011-11-04 13:44 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2011-11-04 13:44 ./usr/lib/R/site-library/limma/html/R.css
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 6023 2011-11-04 13:44 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5603 2011-11-04 13:44 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 518 2011-11-04 13:44 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 2886 2011-11-04 13:44 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 216 2011-11-04 13:44 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 1053 2011-11-04 13:44 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 1984 2011-11-04 13:44 ./usr/lib/R/site-library/limma/NEWS.Rd
--rw-r--r-- root/root 966 2011-11-04 13:44 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10904 2011-11-04 13:44 ./usr/lib/R/site-library/limma/libs/limma.so
--rw-r--r-- root/root 9458 2011-11-04 13:44 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/lib/R/site-library/limma/doc/
--rwxr-xr-x root/root 673 2011-11-04 13:44 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 42743 2011-11-04 13:44 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rwxr-xr-x root/root 87742 2011-11-04 13:44 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rwxr-xr-x root/root 1711 2011-11-04 13:44 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 737661 2011-11-04 13:44 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/share/
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/share/doc/
-drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 26832 2011-11-01 08:30 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 2118 2011-11-04 13:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 329 2011-11-04 13:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/lib/
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/lib/R/
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/lib/R/site-library/limma/
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 198240 2012-03-07 13:14 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 3772 2012-03-07 13:14 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 383 2012-03-07 13:14 ./usr/lib/R/site-library/limma/R/limma
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 454589 2012-03-07 13:14 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 6221 2012-03-07 13:14 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 3259 2012-03-07 13:14 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 2392 2012-03-07 13:14 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 1301 2012-03-07 13:14 ./usr/lib/R/site-library/limma/help/paths.rds
+-rwxr-xr-x root/root 1230 2012-03-07 13:14 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 1901 2012-03-07 13:14 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 34556 2012-03-07 13:14 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2012-03-07 13:14 ./usr/lib/R/site-library/limma/html/R.css
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 6022 2012-03-07 13:14 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5603 2012-03-07 13:14 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 518 2012-03-07 13:14 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 2886 2012-03-07 13:14 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 216 2012-03-07 13:14 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 1051 2012-03-07 13:14 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 2173 2012-03-07 13:14 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 966 2012-03-07 13:14 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 10904 2012-03-07 13:14 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 9458 2012-03-07 13:14 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/lib/R/site-library/limma/doc/
+-rwxr-xr-x root/root 673 2012-03-07 13:14 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 42743 2012-03-07 13:14 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rwxr-xr-x root/root 89361 2012-03-07 13:14 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rwxr-xr-x root/root 1711 2012-03-07 13:14 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 737677 2012-03-07 13:14 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/share/
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/share/doc/
+drwxr-xr-x root/root 0 2012-03-07 13:14 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 27284 2012-03-03 11:22 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 2302 2012-03-07 13:14 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 560 2012-03-07 13:14 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 264 2012-03-07 13:14 ./usr/share/doc/r-bioc-limma/README.Debian
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -675,8 +816,9 @@ drwxr-xr-x root/root 0 2011-11-04 13:44 ./usr/share/doc/r-bioc-limma/
lintian
───────
+Subroutine IO::Socket::INET6::sockaddr_in6 redefined at /usr/share/perl/5.14/Exporter.pm line 67.
+ at /usr/share/perl5/IO/Socket/INET6.pm line 21
I: r-bioc-limma source: missing-debian-source-format
-P: r-bioc-limma source: unversioned-copyright-format-uri http://dep.debian.net/deps/dep5/
W: r-bioc-limma: copyright-without-copyright-notice
W: r-bioc-limma: executable-not-elf-or-script usr/lib/R/site-library/limma/doc/index.html
W: r-bioc-limma: executable-not-elf-or-script usr/lib/R/site-library/limma/doc/changelog.txt
@@ -690,171 +832,25 @@ I: Lintian run was successful.
└──────────────────────────────────────────────────────────────────────────────┘
Purging /«BUILDDIR»
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages will be REMOVED:
- cdbs* debhelper* dpatch* file* fontconfig* fontconfig-config* gettext*
- gettext-base* gfortran* gfortran-4.6* groff-base* html2text*
- intltool-debian* libblas-dev* libblas3gf* libbz2-dev* libcairo2* libcroco3*
- libdatrie1* libexpat1* libfontconfig1* libfreetype6* libgfortran3*
- libglib2.0-0* libice6* libjpeg8* libjpeg8-dev* liblapack-dev* liblapack3gf*
- libmagic1* libncurses5-dev* libpango1.0-0* libpaper-utils* libpaper1*
- libpcre3* libpcre3-dev* libpcrecpp0* libpipeline1* libpixman-1-0*
- libpng12-dev* libreadline-dev* libreadline6-dev* libsm6* libthai-data*
- libthai0* libtiff4* libtinfo-dev* libunistring0* libx11-6* libx11-data*
- libxau6* libxcb-render0* libxcb-shm0* libxcb1* libxdmcp6* libxext6* libxft2*
- libxml2* libxrender1* libxss1* libxt6* man-db* po-debconf* r-base-core*
- r-base-dev* sbuild-build-depends-r-bioc-limma-dummy* tcl8.5* tk8.5*
- ttf-dejavu-core* ucf* unzip* x11-common* xdg-utils* zip* zlib1g-dev*
-0 upgraded, 0 newly installed, 75 to remove and 0 not upgraded.
-After this operation, 128 MB disk space will be freed.
-(Reading database ... 14781 files and directories currently installed.)
-Removing sbuild-build-depends-r-bioc-limma-dummy ...
-Removing r-base-dev ...
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-Purging configuration files for dpatch ...
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-Removing ttf-dejavu-core ...
-Removing ucf ...
-Purging configuration files for ucf ...
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-All runlevel operations denied by policy
-invoke-rc.d: policy-rc.d denied execution of stop.
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-Removing xdg-utils ...
-Removing zip ...
-Removing zlib1g-dev ...
+Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: amd64
-Build-Space: 6224
+Build-Space: 6256
Build-Time: 9
Distribution: unstable
-Install-Time: 90
-Job: r-bioc-limma_3.10.0-1.dsc
+Install-Time: 14
+Job: r-bioc-limma_3.10.3-1.dsc
Lintian: pass
Package: r-bioc-limma
-Package-Time: 103
-Source-Version: 3.10.0-1
-Space: 6224
+Package-Time: 29
+Source-Version: 3.10.3-1
+Space: 6256
Status: successful
-Version: 3.10.0-1
+Version: 3.10.3-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20111104-1344
-Build needed 00:01:43, 6224k disc space
+Finished at 20120307-1314
+Build needed 00:00:29, 6256k disc space
diff --git a/dsc b/dsc
index c6030a3..42ef63c 100644
--- a/dsc
+++ b/dsc
@@ -5,41 +5,41 @@ Format: 1.0
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: any
-Version: 3.10.0-1
+Version: 3.10.3-1
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy at debian.org>
Dm-Upload-Allowed: yes
Homepage: http://bioinf.wehi.edu.au/limma/
-Standards-Version: 3.9.2
+Standards-Version: 3.9.3
Vcs-Browser: http://git.debian.org/?p=debian-med/r-bioc-limma.git
Vcs-Git: git://git.debian.org/git/debian-med/r-bioc-limma.git
-Build-Depends: debhelper (>= 8), cdbs, r-base-dev (>= 2.10.0)
+Build-Depends: debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
Package-List:
r-bioc-limma deb gnu-r optional
Checksums-Sha1:
- cd3498439ab4ae8ca1fdce11126827978b275739 970029 r-bioc-limma_3.10.0.orig.tar.gz
- 511ce3b49d6d951c4176010c23e20fcf8354cafe 2332 r-bioc-limma_3.10.0-1.diff.gz
+ 2f3b66b4aa556abb79dda96fe7c7f2924ed315df 972612 r-bioc-limma_3.10.3.orig.tar.gz
+ e6c12bac2f123e2538b27dbf01f04b7f29cdb363 2738 r-bioc-limma_3.10.3-1.diff.gz
Checksums-Sha256:
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- a75aabfe649c9560c7676d8c0f1004fbc44f621a67d0a827cfb1e11f2d9a6361 2332 r-bioc-limma_3.10.0-1.diff.gz
+ 0431260bbd510a856218fc2a8b0181e83c48dc8a9089f2519f47c19d57bb1c55 972612 r-bioc-limma_3.10.3.orig.tar.gz
+ 1b60bcf1a2e1fc2c8c8a68c6da0aeb7d05154b512f93a465b0e7ca3c214fb2da 2738 r-bioc-limma_3.10.3-1.diff.gz
Files:
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- fa1a62e94c9fb182bf399b981c3c464f 2332 r-bioc-limma_3.10.0-1.diff.gz
+ e0ede45f23425f0e5ac4beb66c2d3b2f 972612 r-bioc-limma_3.10.3.orig.tar.gz
+ fc332d5247809d91edfb76b64878ac66 2738 r-bioc-limma_3.10.3-1.diff.gz
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diff --git a/upload b/upload
new file mode 100644
index 0000000..f899608
--- /dev/null
+++ b/upload
@@ -0,0 +1,6 @@
+u r-bioc-limma_3.10.3-1.dsc ftp.upload.debian.org Wed Mar 7 13:23:27 2012
+u r-bioc-limma_3.10.3.orig.tar.gz ftp.upload.debian.org Wed Mar 7 13:23:31 2012
+u r-bioc-limma_3.10.3-1.diff.gz ftp.upload.debian.org Wed Mar 7 13:23:32 2012
+u r-bioc-limma_3.10.3-1_amd64.deb ftp.upload.debian.org Wed Mar 7 13:23:35 2012
+u r-bioc-limma_3.10.3-1_amd64.changes ftp.upload.debian.org Wed Mar 7 13:23:36 2012
+s r-bioc-limma_3.10.3-1_amd64.changes ftp.upload.debian.org Wed Mar 7 13:23:36 2012
--
linear models for microarray data
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