[med-svn] r10073 - trunk/packages/theseus/trunk/debian

[Andreas Tille]

Author: tille
Date: 2012-03-24 07:23:37 +0000 (Sat, 24 Mar 2012)
New Revision: 10073

Added:
   trunk/packages/theseus/trunk/debian/dirs
   trunk/packages/theseus/trunk/debian/upstream
Modified:
   trunk/packages/theseus/trunk/debian/changelog
Log:
Create debian/upstream files from citation.bib; attention: here we now have another example for multiple references - just testing hereby how this works out


Modified: trunk/packages/theseus/trunk/debian/changelog
===================================================================
--- trunk/packages/theseus/trunk/debian/changelog	2012-03-24 07:19:23 UTC (rev 10072)
+++ trunk/packages/theseus/trunk/debian/changelog	2012-03-24 07:23:37 UTC (rev 10073)
@@ -6,6 +6,8 @@
     - Fixed Vcs fields
   * debian/{control,rules}: Do not mention quilt explicitely
     which is not needed with source version 3.0 (quilt)
+  * debian/upstream: Use information from debian/citation.bib
+    for References in upstream yaml format
 
  -- Andreas Tille <tille at debian.org>  Sat, 24 Mar 2012 07:48:57 +0100
 

Added: trunk/packages/theseus/trunk/debian/dirs
===================================================================
--- trunk/packages/theseus/trunk/debian/dirs	                        (rev 0)
+++ trunk/packages/theseus/trunk/debian/dirs	2012-03-24 07:23:37 UTC (rev 10073)
@@ -0,0 +1 @@
+usr/bin

Added: trunk/packages/theseus/trunk/debian/upstream
===================================================================
--- trunk/packages/theseus/trunk/debian/upstream	                        (rev 0)
+++ trunk/packages/theseus/trunk/debian/upstream	2012-03-24 07:23:37 UTC (rev 10073)
@@ -0,0 +1,33 @@
+Name: disulfinder
+Reference:
+ - Author: Theobald, Douglas L. and Wuttke, Deborah S.
+   Title: "THESEUS: maximum likelihood superpositioning and analysis of macromolecular structures"
+   Journal: Bioinformatics
+   Volume: 22
+   Number: 17
+   Pages: 2171-2172
+   DOI: 10.1093/bioinformatics/btl332
+   Year: 2006
+   URL: http://bioinformatics.oxfordjournals.org/cgi/content/abstract/22/17/2171
+   eprint: http://bioinformatics.oxfordjournals.org/cgi/reprint/22/17/2171.pdf
+ - Author: Theobald, Douglas L. and Wuttke, Deborah S.
+   Title: Empirical Bayes hierarchical models for regularizing maximum likelihood estimation in the matrix Gaussian Procrustes problem
+   Journal: Proceedings of the National Academy of Sciences
+   Volume: 103
+   Number: 49
+   Pages: 18521-18527
+   DOI: 10.1073/pnas.0508445103
+   Year: 2006
+   URL: http://www.pnas.org/content/103/49/18521.abstract
+   eprint: http://www.pnas.org/content/103/49/18521.full.pdf+html
+ - Author: Theobald, Douglas L AND Wuttke, Deborah S
+   Title: Accurate Structural Correlations from Maximum Likelihood Superpositions
+   Journal: PLoS Comput Biol
+   Publisher: Public Library of Science
+   Year:2008
+   Month: Feb
+   Volume: 4
+   URL: http://dx.doi.org/10.1371%2Fjournal.pcbi.0040043
+   Pages: e43
+   Number: 2
+   DOI: 10.1371/journal.pcbi.0040043