[med-svn] r10093 - trunk/packages/R/r-cran-epi/trunk/debian

Andreas Tille tille at alioth.debian.org
Mon Mar 26 13:34:03 UTC 2012 

Author: tille
Date: 2012-03-26 13:34:02 +0000 (Mon, 26 Mar 2012)
New Revision: 10093

Added:
   trunk/packages/R/r-cran-epi/trunk/debian/README.test
   trunk/packages/R/r-cran-epi/trunk/debian/docs
   trunk/packages/R/r-cran-epi/trunk/debian/upstream
Removed:
   trunk/packages/R/r-cran-epi/trunk/debian/README.Debian
Modified:
   trunk/packages/R/r-cran-epi/trunk/debian/changelog
   trunk/packages/R/r-cran-epi/trunk/debian/control
   trunk/packages/R/r-cran-epi/trunk/debian/copyright
   trunk/packages/R/r-cran-epi/trunk/debian/rules
Log:
New upstream version, debian/upstream containing References, R:Depends substitution variable, packaging updates


Deleted: trunk/packages/R/r-cran-epi/trunk/debian/README.Debian
===================================================================
--- trunk/packages/R/r-cran-epi/trunk/debian/README.Debian	2012-03-26 12:30:12 UTC (rev 10092)
+++ trunk/packages/R/r-cran-epi/trunk/debian/README.Debian	2012-03-26 13:34:02 UTC (rev 10093)
@@ -1,5 +0,0 @@
-Notes on how this package can be tested.
-────────────────────────────────────────
-
-This package can be tested by loading it into R with the command
-‘library(Epi)’ in order to confirm its integrity.

Added: trunk/packages/R/r-cran-epi/trunk/debian/README.test
===================================================================
--- trunk/packages/R/r-cran-epi/trunk/debian/README.test	                        (rev 0)
+++ trunk/packages/R/r-cran-epi/trunk/debian/README.test	2012-03-26 13:34:02 UTC (rev 10093)
@@ -0,0 +1,5 @@
+Notes on how this package can be tested.
+────────────────────────────────────────
+
+This package can be tested by loading it into R with the command
+‘library(Epi)’ in order to confirm its integrity.

Modified: trunk/packages/R/r-cran-epi/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-cran-epi/trunk/debian/changelog	2012-03-26 12:30:12 UTC (rev 10092)
+++ trunk/packages/R/r-cran-epi/trunk/debian/changelog	2012-03-26 13:34:02 UTC (rev 10093)
@@ -1,3 +1,20 @@
+r-cran-epi (1.1.33-1) unstable; urgency=low
+
+  * New upstream version
+  * debian/upstream:  Add References
+  * debian/control:
+    - Standards-Version: 3.9.3 (no changes needed)
+    - Build-Depends: r-base-dev (>= 2.14.2~20120222)
+  * debian/rules:
+    - Remove R:Depends substitution variable which is now
+      included in /usr/share/R/debian/r-cran.mk
+  * debian/README.Debian is rather README.test
+  * debian/docs: Install README.test
+  * debian/copyright: Enhances DEP5 compatibility and verified using
+      cme fix dpkg-copyright
+
+ -- Andreas Tille <tille at debian.org>  Mon, 26 Mar 2012 15:04:33 +0200
+
 r-cran-epi (1.1.24-1) unstable; urgency=low
 
   * New upstream version

Modified: trunk/packages/R/r-cran-epi/trunk/debian/control
===================================================================
--- trunk/packages/R/r-cran-epi/trunk/debian/control	2012-03-26 12:30:12 UTC (rev 10092)
+++ trunk/packages/R/r-cran-epi/trunk/debian/control	2012-03-26 13:34:02 UTC (rev 10093)
@@ -4,8 +4,8 @@
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille at debian.org>
 DM-Upload-Allowed: yes
-Build-Depends: debhelper (>= 8), cdbs, r-base-dev
-Standards-Version: 3.9.2
+Build-Depends: debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222)
+Standards-Version: 3.9.3
 Homepage: http://staff.pubhealth.ku.dk/~bxc/Epi/
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-cran-epi/trunk/
 Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/R/r-cran-epi/trunk/

Modified: trunk/packages/R/r-cran-epi/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-cran-epi/trunk/debian/copyright	2012-03-26 12:30:12 UTC (rev 10092)
+++ trunk/packages/R/r-cran-epi/trunk/debian/copyright	2012-03-26 13:34:02 UTC (rev 10093)
@@ -1,12 +1,11 @@
-Format-Specification: http://wiki.debian.org/Proposals/CopyrightFormat
-Upstream-Author: Bendix Carstensen <bxc at steno.dk>
-Packaged-By: Andreas Tille <tille at debian.org>
-Packaged-Date: Mon, 24 Nov 2008 13:12:38 +0100
-Upstream-Source: http://cran.r-project.org/src/contrib/
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: Epi
+Upstream-Contact: Bendix Carstensen <bxc at steno.dk>
+Source: http://cran.r-project.org/src/contrib/
 
 Files: *
+Copyright: 2008-2012 Bendix Carstensen, Martyn Plummer, Esa Laara, Michael Hills et. al.
 License: GPL2+
-Copyright: 2008 Bendix Carstensen, Martyn Plummer, Esa Laara, Michael Hills et. al.
  This program is free software: you can redistribute it and/or modify
  it under the terms of the GNU General Public License as published by
  the Free Software Foundation, either version 2 of the License, or
@@ -19,10 +18,12 @@
  .
  You should have received a copy of the GNU General Public License
  along with this program.  If not, see <http://www.gnu.org/licenses/>.
-X-Comment: On Debian systems, the complete text of the GNU Public
+ .
+ On Debian systems, the complete text of the GNU Public
  License can be found in `/usr/share/common-licenses/GPL'.
 
 Files: debian/*
-Copyright: © 2008 Andreas Tille <tille at debian.org>
-License: Same as r-cran-epitools itelf
- (see above)
+Copyright: 2008-2012 Andreas Tille <tille at debian.org>
+License: GPL2+
+ Same as r-cran-epitools itelf
+

Added: trunk/packages/R/r-cran-epi/trunk/debian/docs
===================================================================
--- trunk/packages/R/r-cran-epi/trunk/debian/docs	                        (rev 0)
+++ trunk/packages/R/r-cran-epi/trunk/debian/docs	2012-03-26 13:34:02 UTC (rev 10093)
@@ -0,0 +1 @@
+debian/README.test

Modified: trunk/packages/R/r-cran-epi/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-cran-epi/trunk/debian/rules	2012-03-26 12:30:12 UTC (rev 10092)
+++ trunk/packages/R/r-cran-epi/trunk/debian/rules	2012-03-26 13:34:02 UTC (rev 10093)
@@ -8,9 +8,6 @@
 DEB_COMPRESS_EXCLUDE_ALL := .pdf
 
 install/$(package)::
-	# Require a number equal or superior than the R version the package was built with.
-	echo "R:Depends=r-base-core (>= $(shell R --version | head -n1 | perl -ne 'print / +([0-9]\.[0-9]+\.[0-9])/')~)" >> debian/r-$(debRreposname)-$(cranName).substvars
-	#
 	mv debian/$(package)/usr/lib/R/site-library/Epi/doc/* debian/$(package)/usr/share/doc/$(package)
 	rmdir debian/$(package)/usr/lib/R/site-library/Epi/doc
 	# install examples and unset executable flag (which is the reason why no debian/examples

Added: trunk/packages/R/r-cran-epi/trunk/debian/upstream
===================================================================
--- trunk/packages/R/r-cran-epi/trunk/debian/upstream	                        (rev 0)
+++ trunk/packages/R/r-cran-epi/trunk/debian/upstream	2012-03-26 13:34:02 UTC (rev 10093)
@@ -0,0 +1,9 @@
+Reference:
+  Title: "Lexis: An R Class for Epidemiological Studies with Long-Term Follow-Up"
+  Author: Martyn Plummer, Bendix Carstensen
+  Journal: Journal of Statistical Software
+  Year: 2011
+  Volume: 38
+  Number: 5
+  Pages: 1--12
+  URL: http://www.jstatsoft.org/v38/i05/

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