[med-svn] r10097 - trunk/packages/R/r-cran-epir/trunk/debian
Andreas Tille
tille at alioth.debian.org
Mon Mar 26 14:33:35 UTC 2012
Author: tille
Date: 2012-03-26 14:33:35 +0000 (Mon, 26 Mar 2012)
New Revision: 10097
Added:
trunk/packages/R/r-cran-epir/trunk/debian/README.test
trunk/packages/R/r-cran-epir/trunk/debian/docs
Removed:
trunk/packages/R/r-cran-epir/trunk/debian/README.Debian
Modified:
trunk/packages/R/r-cran-epir/trunk/debian/changelog
trunk/packages/R/r-cran-epir/trunk/debian/control
trunk/packages/R/r-cran-epir/trunk/debian/copyright
trunk/packages/R/r-cran-epir/trunk/debian/rules
Log:
New upstream version (added (build-)depends); R:Depends substitution variable; DEP5; other usual packaging updates
Deleted: trunk/packages/R/r-cran-epir/trunk/debian/README.Debian
===================================================================
--- trunk/packages/R/r-cran-epir/trunk/debian/README.Debian 2012-03-26 13:59:56 UTC (rev 10096)
+++ trunk/packages/R/r-cran-epir/trunk/debian/README.Debian 2012-03-26 14:33:35 UTC (rev 10097)
@@ -1,7 +0,0 @@
-Notes on how this package can be tested.
-────────────────────────────────────────
-
-This package can be tested by loading it into R with the command
-‘library(epiR)’ in order to confirm its integrity.
-
- -- Andreas Tille <tille at debian.org> Fri, 30 Jul 2010 23:09:30 +0200
Added: trunk/packages/R/r-cran-epir/trunk/debian/README.test
===================================================================
--- trunk/packages/R/r-cran-epir/trunk/debian/README.test (rev 0)
+++ trunk/packages/R/r-cran-epir/trunk/debian/README.test 2012-03-26 14:33:35 UTC (rev 10097)
@@ -0,0 +1,7 @@
+Notes on how this package can be tested.
+────────────────────────────────────────
+
+This package can be tested by loading it into R with the command
+‘library(epiR)’ in order to confirm its integrity.
+
+ -- Andreas Tille <tille at debian.org> Fri, 30 Jul 2010 23:09:30 +0200
Modified: trunk/packages/R/r-cran-epir/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-cran-epir/trunk/debian/changelog 2012-03-26 13:59:56 UTC (rev 10096)
+++ trunk/packages/R/r-cran-epir/trunk/debian/changelog 2012-03-26 14:33:35 UTC (rev 10097)
@@ -1,3 +1,21 @@
+r-cran-epir (0.9-38-1) unstable; urgency=low
+
+ * New upstream version
+ * debian/control:
+ - Standards-Version: 3.9.3 (no changes needed)
+ - Build-Depends: r-base-dev (>= 2.14.2~20120222),
+ r-cran-survival, r-cran-hmisc
+ - Depends: r-cran-survival, r-cran-hmisc
+ * debian/rules:
+ - Remove R:Depends substitution variable which is now
+ included in /usr/share/R/debian/r-cran.mk
+ * debian/README.Debian is rather README.test
+ * debian/docs: Install README.test
+ * debian/copyright: Enhanced DEP5 compatibility and verified using
+ cme fix dpkg-copyright
+
+ -- Andreas Tille <tille at debian.org> Mon, 26 Mar 2012 16:09:03 +0200
+
r-cran-epir (0.9-32-1) unstable; urgency=low
* New upstream version
Modified: trunk/packages/R/r-cran-epir/trunk/debian/control
===================================================================
--- trunk/packages/R/r-cran-epir/trunk/debian/control 2012-03-26 13:59:56 UTC (rev 10096)
+++ trunk/packages/R/r-cran-epir/trunk/debian/control 2012-03-26 14:33:35 UTC (rev 10097)
@@ -4,15 +4,16 @@
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
Uploaders: Andreas Tille <tille at debian.org>
DM-Upload-Allowed: yes
-Build-Depends: debhelper (>= 8), cdbs, r-base-dev
-Standards-Version: 3.9.2
+Build-Depends: debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222), r-cran-survival,
+ r-cran-hmisc
+Standards-Version: 3.9.3
Homepage: http://cran.r-project.org/web/packages/epiR
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-cran-epir/trunk/
Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/R/r-cran-epir/trunk/
Package: r-cran-epir
Architecture: all
-Depends: ${shlibs:Depends}, ${R:Depends}
+Depends: ${shlibs:Depends}, ${R:Depends}, r-cran-survival, r-cran-hmisc
Suggests: r-cran-surveillance, r-cran-epi, r-cran-epibasix, r-cran-epitools
Description: GNU R Functions for analysing epidemiological data
A package for analysing epidemiological data. Contains functions for
Modified: trunk/packages/R/r-cran-epir/trunk/debian/copyright
===================================================================
--- trunk/packages/R/r-cran-epir/trunk/debian/copyright 2012-03-26 13:59:56 UTC (rev 10096)
+++ trunk/packages/R/r-cran-epir/trunk/debian/copyright 2012-03-26 14:33:35 UTC (rev 10097)
@@ -1,33 +1,31 @@
-Format: Machine-readable license summary, see http://dep.debian.net/deps/dep5/
-
-Name: EpiR
-Contact: Mark Stevenson <M.Stevenson at massey.ac.nz>
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: EpiR
+Upstream-Contact: Mark Stevenson <M.Stevenson at massey.ac.nz>
Source: http://cran.r-project.org/web/packages/epiR
+Files: *
+Copyright: 2009-2012 Mark Stevenson with contributions from Telmo Nunes, Javier Sanchez, and Ron Thornton
License: GPL-2+
-Copyright: 2009 Mark Stevenson with contributions from Telmo Nunes, Javier Sanchez, and Ron Thornton
- This program is free software: you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation, either version 2 of the License, or
- (at your option) any later version.
-
- This program is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- GNU General Public License for more details.
-
- You should have received a copy of the GNU General Public License
- along with this program. If not, see <http://www.gnu.org/licenses/>.
+Files: debian/*
+Copyright: 2008-2012 Andreas Tille <tille at debian.org>
+ 2009 Charles Plessy <plessy at debian.org>
+License: GPL-2+
-Comment: On Debian systems, the complete text of the GNU Public
+License: GPL-2+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 2 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program. If not, see <http://www.gnu.org/licenses/>.
+ .
+ On Debian systems, the complete text of the GNU Public
License version 2 can be found in `/usr/share/common-licenses/GPL-2'.
-
-Files: debian/*
-Copyright: 2008 Andreas Tille <tille at debian.org>
- 2009 Charles Plessy <plessy at debian.org>
-License: Same as r-cran-epir itelf
- (see above)
-Packaged-By: Andreas Tille <tille at debian.org>
-Packaged-Date: Thu, 19 Nov 2009 15:38:39 +0100
Added: trunk/packages/R/r-cran-epir/trunk/debian/docs
===================================================================
--- trunk/packages/R/r-cran-epir/trunk/debian/docs (rev 0)
+++ trunk/packages/R/r-cran-epir/trunk/debian/docs 2012-03-26 14:33:35 UTC (rev 10097)
@@ -0,0 +1 @@
+debian/README.test
Modified: trunk/packages/R/r-cran-epir/trunk/debian/rules
===================================================================
--- trunk/packages/R/r-cran-epir/trunk/debian/rules 2012-03-26 13:59:56 UTC (rev 10096)
+++ trunk/packages/R/r-cran-epir/trunk/debian/rules 2012-03-26 14:33:35 UTC (rev 10097)
@@ -6,7 +6,5 @@
include /usr/share/R/debian/r-cran.mk
# Require a number equal or superior than the R version the package was built with.
-install/r-$(debRreposname)-$(cranName)::
- echo "R:Depends=r-base-core (>= $(shell R --version | head -n1 | perl -ne 'print / +([0-9]\.[0-9]+\.[0-9])/')~)" >> debian/r-$(debRreposname)-$(cranName).substvars
+install/$(package)::
chmod a-x debian/$(package)/usr/lib/R/site-library/epiR/DESCRIPTION
-# chmod a-x debian/$(package)/usr/lib/R/site-library/$(cranName)/DESCRIPTION
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