[med-svn] r10138 - trunk/packages/seq-gen/trunk/debian

[Alex Mestiashvili]

Author: malex-guest
Date: 2012-03-29 09:32:57 +0000 (Thu, 29 Mar 2012)
New Revision: 10138

Modified:
   trunk/packages/seq-gen/trunk/debian/changelog
   trunk/packages/seq-gen/trunk/debian/control
   trunk/packages/seq-gen/trunk/debian/copyright
   trunk/packages/seq-gen/trunk/debian/get-orig-source
   trunk/packages/seq-gen/trunk/debian/seq-gen.1
Log:
  * debian/control section changed to non-free/science
  * fixed debian/watch and debian/get-orig-source scripts
  * debian/seq-gen.1 fixed hyphen-used-as-minus-sign warning



Modified: trunk/packages/seq-gen/trunk/debian/changelog
===================================================================
--- trunk/packages/seq-gen/trunk/debian/changelog	2012-03-29 08:44:59 UTC (rev 10137)
+++ trunk/packages/seq-gen/trunk/debian/changelog	2012-03-29 09:32:57 UTC (rev 10138)
@@ -1,8 +1,11 @@
 seq-gen (1.3.3-1) unstable; urgency=low
 
   * New upstream release 1.3.3 
+  * debian/control section changed to non-free/science
+  * fixed debian/watch and debian/get-orig-source scripts
+  * debian/seq-gen.1 fixed hyphen-used-as-minus-sign warning
 
- -- Alexandre Mestiashvili <alex at biotec.tu-dresden.de>  Fri, 23 Dec 2011 10:55:46 +0100
+ -- Alexandre Mestiashvili <alex at biotec.tu-dresden.de>  Thu, 23 Mar 2012 11:28:46 +0100
 
 seq-gen (1.3.2-2) unstable; urgency=low
 

Modified: trunk/packages/seq-gen/trunk/debian/control
===================================================================
--- trunk/packages/seq-gen/trunk/debian/control	2012-03-29 08:44:59 UTC (rev 10137)
+++ trunk/packages/seq-gen/trunk/debian/control	2012-03-29 09:32:57 UTC (rev 10138)
@@ -1,12 +1,12 @@
 Source: seq-gen
-Section: science
+Section: non-free/science
 Priority: optional
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 DM-Upload-Allowed: yes
 Uploaders: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>,
  Andreas Tille <tille at debian.org>
 Build-Depends: debhelper (>= 8)
-Standards-Version: 3.9.2
+Standards-Version: 3.9.3
 Homepage: http://tree.bio.ed.ac.uk/software/seqgen/ 
 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/seq-gen/?rev=0&sc=0
 Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/seq-gen/trunk/

Modified: trunk/packages/seq-gen/trunk/debian/copyright
===================================================================
--- trunk/packages/seq-gen/trunk/debian/copyright	2012-03-29 08:44:59 UTC (rev 10137)
+++ trunk/packages/seq-gen/trunk/debian/copyright	2012-03-29 09:32:57 UTC (rev 10138)
@@ -1,4 +1,4 @@
-Format: http://dep.debian.net/deps/dep5/
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: seq-gen
 Source: http://tree.bio.ed.ac.uk/software/seqgen/
 

Modified: trunk/packages/seq-gen/trunk/debian/get-orig-source
===================================================================
--- trunk/packages/seq-gen/trunk/debian/get-orig-source	2012-03-29 08:44:59 UTC (rev 10137)
+++ trunk/packages/seq-gen/trunk/debian/get-orig-source	2012-03-29 09:32:57 UTC (rev 10138)
@@ -1,5 +1,7 @@
 #!/bin/bash
 
+#one should run uscan --force-download in order to run get-orig-source.
+
 #taken from figtree get-orig-source
 PKG=`dpkg-parsechangelog | awk '/Source:/ {print $2}'`
 
@@ -24,7 +26,7 @@
 mkdir ../tarballs/${PKG}-${VERSION}
 
 #convert to proper name
-tar -xvzf ../tarballs/${PKG}_${VERSION}.tgz -C ../tarballs/${PKG}-${VERSION}/ --strip-components=1
+tar -xvf ../tarballs/${PKG}_${VERSION}.tgz -C ../tarballs/${PKG}-${VERSION}/ --strip-components=1
 
 cd ../tarballs
 find ${PKG}-${VERSION}/ -type f -name "._*" -exec rm -f '{}' \;

Modified: trunk/packages/seq-gen/trunk/debian/seq-gen.1
===================================================================
--- trunk/packages/seq-gen/trunk/debian/seq-gen.1	2012-03-29 08:44:59 UTC (rev 10137)
+++ trunk/packages/seq-gen/trunk/debian/seq-gen.1	2012-03-29 09:32:57 UTC (rev 10138)
@@ -1,13 +1,13 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.38.2.
-.TH SEQ-GEN "1" "March 2011" "seq-gen 1.3.2" "User Commands"
+.TH SEQ-GEN "1" "March 2011" "seq-gen 1.3.3" "User Commands"
 .SH NAME
 seq-gen \- Sequence Generator
 .SH SYNOPSIS
 .B seq-gen
-[\fI-m MODEL\fR] [\fI-l #\fR] [\fI-n #\fR] [\fI-p #\fR] [\fI-s # | -d #\fR] [\fI-k #\fR][\-c #1 #2 #3 | \-a\fR # [\-g #]] [\-f e | #] [\-t # | \-r\fR #][\-z #] [\-o[p][r][n]] [\-w[a][r]] [\-x NAME] [\-q] [\-h] [treefile]
+[\fI-m MODEL\fR] [\fI-l #\fR] [\fI-n #\fR] [\fI-p #\fR] [\fI-s # | \-d #\fR] [\fI-k #\fR][\-c #1 #2 #3 | \-a\fR # [\-g #]] [\-f e | #] [\-t # | \-r\fR #][\-z #] [\-o[p][r][n]] [\-w[a][r]] [\-x NAME] [\-q] [\-h] [treefile]
 .SH DESCRIPTION
 Sequence Generator \- seq\-gen
-Version 1.3.2
+Version 1.3.3
 .IP
 .HP
 \fB\-l\fR: # = sequence length [default = 1000].