[med-svn] [SCM] bowtie2 branch, master, updated. upstream/2.0.0-beta5-18-g2f459ff

[Alexandre Mestiashvili]

The following commit has been merged in the master branch:
commit bc61822d516c2ca19e74ed47e0e76dd20bb05ab3
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Wed May 9 14:22:08 2012 +0200

    fixed too-long line in changelog, added versioned URI format for copyright
    removed bug close statement (not sure if it really closes the bug)

diff --git a/debian/changelog b/debian/changelog
index a28936c..8d6ee53 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,14 +1,14 @@
 bowtie2 (2.0.0-beta5-2) UNRELEASED; urgency=low
 
   [ Alexandre Mestiashvili ]
-  * file sse_util.h has missing copyright header. The Author (Benjamin Langmead) has 
+  * file sse_util.h has missing copyright header. 
+    The Author (Benjamin Langmead) has
     confirmed that the file is distributed under GPL3 license.
 
   [ Andreas Tille ]
   * debian/upstream: Added publication
   * debian/patches/fix_makefile_machine_detection.patch + debian/rules:
     prevent -mXX and -msse2 switches for non Intel architectures
-    Closes: #668123
 
  -- Andreas Tille <tille at debian.org>  Thu, 26 Apr 2012 13:59:54 +0200
 
diff --git a/debian/copyright b/debian/copyright
index 8c3c1fe..849026b 100644
--- a/debian/copyright
+++ b/debian/copyright
@@ -1,4 +1,4 @@
-Format: http://dep.debian.net/deps/dep5/
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
 Upstream-Name: Bowtie2
 Upstream-Contact: Ben Langmead <blangmea at jhsph.edu>
 Source: http://sourceforge.net/projects/bowtie2-bio/files/bowtie2/

-- 
ultrafast memory-efficient short read aligner