[med-svn] r10824 - trunk/packages/tree-puzzle/trunk/debian

[Andreas Tille]

Author: tille
Date: 2012-05-11 08:30:36 +0000 (Fri, 11 May 2012)
New Revision: 10824

Added:
   trunk/packages/tree-puzzle/trunk/debian/upstream
Modified:
   trunk/packages/tree-puzzle/trunk/debian/changelog
Log:
Citation of the day


Modified: trunk/packages/tree-puzzle/trunk/debian/changelog
===================================================================
--- trunk/packages/tree-puzzle/trunk/debian/changelog	2012-05-11 03:48:48 UTC (rev 10823)
+++ trunk/packages/tree-puzzle/trunk/debian/changelog	2012-05-11 08:30:36 UTC (rev 10824)
@@ -1,3 +1,9 @@
+tree-puzzle (5.2-8) UNRELEASED; urgency=low
+
+  * debian/upstream: Add publications
+
+ -- Andreas Tille <tille at debian.org>  Fri, 11 May 2012 10:29:17 +0200
+
 tree-puzzle (5.2-7) unstable; urgency=low
 
   * debian/control:

Added: trunk/packages/tree-puzzle/trunk/debian/upstream
===================================================================
--- trunk/packages/tree-puzzle/trunk/debian/upstream	                        (rev 0)
+++ trunk/packages/tree-puzzle/trunk/debian/upstream	2012-05-11 08:30:36 UTC (rev 10824)
@@ -0,0 +1,63 @@
+Reference:
+ - Author: Heiko A. Schmidt and Korbinian Strimmer and Martin Vingron and Arndt von Haeseler
+   Title: TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
+   Journal: Bioinformatics
+   Year: 2002
+   Volume: 18
+   Number: 3
+   Pages: 502-504
+   DOI: 10.1093/bioinformatics/18.3.502
+   PMID: 11934758
+   URL: http://bioinformatics.oxfordjournals.org/content/18/3/502
+   eprint: http://bioinformatics.oxfordjournals.org/content/18/3/502.full.pdf+html
+ - Author: Korbinian Strimmer and Arndt von Haeseler
+   Title: Quartet puzzling: A quartet maximum likelihood method for reconstructing tree topologies
+   Journal: Mol. Biol. Evol.
+   Year: 1996
+   Volume: 13
+   Number: 7
+   Pages: 964-969
+   URL: http://mbe.oxfordjournals.org/content/13/7/964.citation
+   eprint: http://mbe.oxfordjournals.org/content/13/7/964.full.pdf+html
+ - Author: Korbinian Strimmer and Arndt von Haeseler
+   Title: Likelihood-mapping: A simple method to visualize phylogenetic content of a sequence alignment
+   Journal: Proceedings of the National Academy of Sciences of the United States of America
+   Year: 1997
+   Volume: 94
+   Number: 13
+   Pages: 6815-6819
+   PMID: 9192648
+   URL: http://www.pnas.org/content/94/13/6815.long
+   eprint: http://www.pnas.org/content/94/13/6815.full.pdf+html
+ - Author: Korbinian Strimmer and N. Goldman and Arndt von Haeseler
+   Title: Bayesian Probabilities and Quartet Puzzling
+   Journal: Molecular Biology and Evolution
+   Year: 1997
+   Volume: 14
+   Number: 2
+   Pages: 210-213
+   URL: http://mbe.oxfordjournals.org/content/14/2/210.citation
+   eprint: http://mbe.oxfordjournals.org/content/14/2/210.full.pdf+html
+ - Author: Heiko A. Schmidt and Korbinian Strimmer and Martin Vingron and Arndt von Haeseler
+   Title: TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
+   Journal: Bioinformatics
+   Year: 2002
+   Volume: 18
+   Number: 3
+   Pages: 502-504
+   DOI: 10.1093/bioinformatics/18.3.502
+   PMID: 11934758
+   URL: http://bioinformatics.oxfordjournals.org/content/18/3/502
+   eprint: http://bioinformatics.oxfordjournals.org/content/18/3/502.full.pdf+html
+   debian-package: tree-ppuzzle 
+ - Author: Heiko A. Schmidt and E. Petzold and Martin Vingron and Arndt von Haeseler
+   Title: Molecular phylogenetics: parallelized parameter estimation and quartet puzzling
+   Journal: Journal of Parallel and Distributed Computing
+   Year: 2003
+   Volume: 63
+   Number: 7-8
+   Pages: 719–727
+   DOI: 10.1016/S0743-7315(03)00129-1
+   URL: http://www.sciencedirect.com/science/article/pii/S0743731503001291
+   eprint: http://pdn.sciencedirect.com/science?_ob=MiamiImageURL&_cid=272438&_user=661252&_pii=S0743731503001291&_check=y&_origin=article&_zone=toolbar&_coverDate=31-Aug-2003&view=c&originContentFamily=serial&wchp=dGLbVlt-zSkWb&md5=3ed4a64214b45f1cd935565b0cbc909b/1-s2.0-S0743731503001291-main.pdf
+   debian-package: tree-ppuzzle