[med-svn] r10999 - trunk/packages/sift/trunk/debian

[Andreas Tille]

Author: tille
Date: 2012-05-25 08:46:12 +0000 (Fri, 25 May 2012)
New Revision: 10999

Added:
   trunk/packages/sift/trunk/debian/upstream
Modified:
   trunk/packages/sift/trunk/debian/changelog
Log:
Citation of the day


Modified: trunk/packages/sift/trunk/debian/changelog
===================================================================
--- trunk/packages/sift/trunk/debian/changelog	2012-05-24 21:26:20 UTC (rev 10998)
+++ trunk/packages/sift/trunk/debian/changelog	2012-05-25 08:46:12 UTC (rev 10999)
@@ -1,3 +1,9 @@
+sift (4.0.3b-4) UNRELEASED; urgency=low
+
+  * debian/upstream: Add citations
+
+ -- Andreas Tille <tille at debian.org>  Fri, 25 May 2012 10:45:33 +0200
+
 sift (4.0.3b-3) unstable; urgency=low
 
   * Added patches from Michael Bienia <geser at ubuntu.com>.

Added: trunk/packages/sift/trunk/debian/upstream
===================================================================
--- trunk/packages/sift/trunk/debian/upstream	                        (rev 0)
+++ trunk/packages/sift/trunk/debian/upstream	2012-05-25 08:46:12 UTC (rev 10999)
@@ -0,0 +1,55 @@
+Reference:
+ - Author: Prateek Kumar and Steven Henikoff and Pauline C Ng
+   Title: Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm
+   Journal: Nature Protocols
+   Year: 2009
+   Volume: 4
+   Number: 7
+   Pages: 1073-81
+   DOI: 10.1038/nprot.2009.86
+   PMID: 19561590
+   URL: http://www.nature.com/nprot/journal/v4/n7/full/nprot.2009.86.html
+   eprint: http://www.nature.com/nprot/journal/v4/n7/pdf/nprot.2009.86.pdf
+ - Author: Pauline C Ng and Steven Henikoff
+   Title: Predicting the effects of amino acid substitutions on protein function
+   Journal: Annu Rev Genomics Hum Genet.
+   Year: 2006
+   Volume: 7
+   Pages: 61-80
+   DOI: 10.1146/annurev.genom.7.080505.115630
+   PMID: 16824020
+   URL: http://www.annualreviews.org/doi/abs/10.1146/annurev.genom.7.080505.115630
+   eprint: http://www.annualreviews.org/doi/pdf/10.1146/annurev.genom.7.080505.115630
+ - Author: Pauline C Ng and Steven Henikoff
+   Title: "SIFT: Predicting amino acid changes that affect protein function"
+   Journal: Nucleic Acids Research
+   Year: 2003
+   Volume: 31
+   Number: 13
+   Pages: 3812-4
+   DOI: 10.1093/nar/gkg509
+   PMID: 12824425
+   URL: http://nar.oxfordjournals.org/content/31/13/3812.abstract
+   eprint: http://nar.oxfordjournals.org/content/31/13/3812.full.pdf+html
+ - Author: Pauline C Ng and Steven Henikoff
+   Title: "Accounting for human polymorphisms predicted to affect protein function"
+   Journal: Genome Research
+   Year: 2002
+   Volume: 12
+   Number: 3
+   Pages: 436-46
+   DOI: 10.1101/gr.212802
+   PMID: 11875032
+   URL: http://genome.cshlp.org/content/12/3/436
+   eprint: http://genome.cshlp.org/content/12/3/436.full.pdf+html
+ - Author: Pauline C Ng and Steven Henikoff
+   Title: Predicting deleterious amino acid substitutions
+   Journal: Genome Research
+   Year: 2001
+   Volume: 11
+   Number: 5
+   Pages: 863-74
+   DOI: 10.1101/gr.176601
+   PMID: 11337480
+   URL: http://genome.cshlp.org/content/11/5/863
+   eprint: http://genome.cshlp.org/content/11/5/863.full.pdf+html