[med-svn] r11034 - trunk/packages/strap/trunk/debian

Mon May 28 14:47:44 UTC 2012

Author: christophgil-guest
Date: 2012-05-28 14:47:44 +0000 (Mon, 28 May 2012)
New Revision: 11034

Added:
   trunk/packages/strap/trunk/debian/changelog
   trunk/packages/strap/trunk/debian/compat
   trunk/packages/strap/trunk/debian/control
   trunk/packages/strap/trunk/debian/control~
   trunk/packages/strap/trunk/debian/debhelper.log
   trunk/packages/strap/trunk/debian/menu
   trunk/packages/strap/trunk/debian/postinst.debhelper
   trunk/packages/strap/trunk/debian/postrm.debhelper
   trunk/packages/strap/trunk/debian/strap.debhelper.log
   trunk/packages/strap/trunk/debian/substvars
Log:


Added: trunk/packages/strap/trunk/debian/changelog
===================================================================

--- trunk/packages/strap/trunk/debian/changelog	                        (rev 0)
+++ trunk/packages/strap/trunk/debian/changelog	2012-05-28 14:47:44 UTC (rev 11034)
@@ -0,0 +1,6 @@
+strap (1-1) UNRELEASED; urgency=low
+
+  * Initial release (Closes: #xxxxxxxxx)
+
+ -- Christoph Gille <christophgil at googlemail.com>  Thu, 17 Nov 2011 18:30:16 +0100
+	

Added: trunk/packages/strap/trunk/debian/compat
===================================================================
--- trunk/packages/strap/trunk/debian/compat	                        (rev 0)
+++ trunk/packages/strap/trunk/debian/compat	2012-05-28 14:47:44 UTC (rev 11034)
@@ -0,0 +1 @@
+8

Added: trunk/packages/strap/trunk/debian/control
===================================================================
--- trunk/packages/strap/trunk/debian/control	                        (rev 0)
+++ trunk/packages/strap/trunk/debian/control	2012-05-28 14:47:44 UTC (rev 11034)
@@ -0,0 +1,32 @@
+Source: strap
+Section: science
+Priority: extra
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Christoph Gille <christophgil at googlemail.com>
+Build-Depends: libstrap-java
+Standards-Version: 3.9.2
+Homepage: http://3d-alignment.eu/
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/strap/trunk/
+Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/strap/trunk/
+
+Package: strap
+Architecture: all
+Depends: libstrap-java, ${misc:Depends}, gwrite, catdoc, clustalw, tm-align, pymol,  texlive-latex-base, mustang
+Recommends:  
+Suggests:
+Enhances: clustalw, tm-align, pymol, mustang
+Description: Compute and edit Sequence and structure alignments of proteins.
+ Strap is a work-bench for proteins. It can compute multiple sequence
+ alignments and structure alignments and it is used structure/function
+ prediction and database searching.  Modern standard tools can be used
+ in an intuitive graphical user interface which follows the paradigms
+ of modern user interfaces such as drag'n drop.  The sequence
+ alignment view and the 3D-visualization (Pymol, Jmol or OpenAstex)
+ are tightly linked.  Information can be attached to residue
+ selections such as free text notes as well as 3D and 1D display
+ styles.  Figures can be created in publication quality. The alignment
+ can be exported in several formats: PDF, MS-Word, HTML, Jalview,
+ Multiple-Fasta, ClustalW, MSF, HSSP - see http://3d-alignment.eu/ for
+ details.  Interactive alignments can be published in Web-pages. For
+ this purpose, HTML code is generated automatically.
+ 
\ No newline at end of file

Added: trunk/packages/strap/trunk/debian/control~
===================================================================
--- trunk/packages/strap/trunk/debian/control~	                        (rev 0)
+++ trunk/packages/strap/trunk/debian/control~	2012-05-28 14:47:44 UTC (rev 11034)
@@ -0,0 +1,31 @@
+Source: strap
+Section: science
+Priority: extra
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Christoph Gille <christophgil at googlemail.com>
+Build-Depends: libstrap-java
+Standards-Version: 3.9.2
+Homepage: http://3d-alignment.eu/
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/strap/trunk/
+Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/strap/trunk/
+
+Package: strap
+Architecture: all
+Depends: libstrap-java, ${misc:Depends}, gwrite, catdoc, clustalw, tm-align, neobio, pymol
+Recommends:  
+Suggests: texlive-latex-base
+Enhances: clustalw, tm-align
+Description: Compute and edit Sequence and structure alignments of proteins.
+ Strap is a work-bench for proteins. It can compute multiple sequence
+ alignments and structure alignments and it is used structure/function
+ prediction and database searching.  Modern standard tools can be used
+ in an intuitive graphical user interface which follows the paradigms
+ of modern user interfaces such as drag'n drop.  The sequence
+ alignment view and the 3D-visualization (Pymol, Jmol or OpenAstex)
+ are tightly linked.  Information can be attached to residue
+ selections such as free text notes as well as 3D and 1D display
+ styles.  Figures can be created in publication quality. The alignment
+ can be exported in several formats: PDF, MS-Word, HTML, Jalview,
+ Multiple-Fasta, ClustalW, MSF, HSSP - see http://3d-alignment.eu/ for
+ details.  Interactive alignments can be published in Web-pages. For
+ this purpose, HTML code is generated automatically.

Added: trunk/packages/strap/trunk/debian/debhelper.log
===================================================================
--- trunk/packages/strap/trunk/debian/debhelper.log	                        (rev 0)
+++ trunk/packages/strap/trunk/debian/debhelper.log	2012-05-28 14:47:44 UTC (rev 11034)
@@ -0,0 +1,45 @@
+dh_auto_configure
+dh_auto_build
+dh_auto_test
+dh_prep
+dh_installdirs
+dh_auto_install
+dh_install
+dh_installdocs
+dh_installchangelogs
+dh_installexamples
+dh_installman
+dh_installcatalogs
+dh_installcron
+dh_installdebconf
+dh_installemacsen
+dh_installifupdown
+dh_installinfo
+dh_pysupport
+dh_installinit
+dh_installmenu
+dh_installmime
+dh_installmodules
+dh_installlogcheck
+dh_installlogrotate
+dh_installpam
+dh_installppp
+dh_installudev
+dh_installwm
+dh_installxfonts
+dh_bugfiles
+dh_lintian
+dh_gconf
+dh_icons
+dh_perl
+dh_usrlocal
+dh_link
+dh_compress
+dh_fixperms
+dh_strip
+dh_makeshlibs
+dh_shlibdeps
+dh_installdeb
+dh_gencontrol
+dh_md5sums
+dh_builddeb

Added: trunk/packages/strap/trunk/debian/menu
===================================================================
--- trunk/packages/strap/trunk/debian/menu	                        (rev 0)
+++ trunk/packages/strap/trunk/debian/menu	2012-05-28 14:47:44 UTC (rev 11034)
@@ -0,0 +1,7 @@
+?package(strap):\
+        needs="X11"\
+        section="Applications/Science/Biology"\
+        hints="Sequence alignment"\
+        longtitle="Strap: User Interface for sequence and 3D protein alignments"\
+        title="Strap"\
+        command="/usr/bin/strap"

Added: trunk/packages/strap/trunk/debian/postinst.debhelper
===================================================================
--- trunk/packages/strap/trunk/debian/postinst.debhelper	                        (rev 0)
+++ trunk/packages/strap/trunk/debian/postinst.debhelper	2012-05-28 14:47:44 UTC (rev 11034)
@@ -0,0 +1,5 @@
+# Automatically added by dh_installmenu
+if [ "$1" = "configure" ] && [ -x "`which update-menus 2>/dev/null`" ]; then
+	update-menus
+fi
+# End automatically added section

Added: trunk/packages/strap/trunk/debian/postrm.debhelper
===================================================================
--- trunk/packages/strap/trunk/debian/postrm.debhelper	                        (rev 0)
+++ trunk/packages/strap/trunk/debian/postrm.debhelper	2012-05-28 14:47:44 UTC (rev 11034)
@@ -0,0 +1,3 @@
+# Automatically added by dh_installmenu
+if [ -x "`which update-menus 2>/dev/null`" ]; then update-menus ; fi
+# End automatically added section

Added: trunk/packages/strap/trunk/debian/strap.debhelper.log
===================================================================
--- trunk/packages/strap/trunk/debian/strap.debhelper.log	                        (rev 0)
+++ trunk/packages/strap/trunk/debian/strap.debhelper.log	2012-05-28 14:47:44 UTC (rev 11034)
@@ -0,0 +1,3 @@
+dh_auto_configure
+dh_auto_build
+dh_auto_test

Added: trunk/packages/strap/trunk/debian/substvars
===================================================================
--- trunk/packages/strap/trunk/debian/substvars	                        (rev 0)
+++ trunk/packages/strap/trunk/debian/substvars	2012-05-28 14:47:44 UTC (rev 11034)
@@ -0,0 +1 @@
+misc:Depends=


