[med-svn] [SCM] bowtie2 branch, master, updated. upstream/2.0.0-beta6-24-g5117c55

[Alexandre Mestiashvili]

The following commit has been merged in the master branch:
commit 5117c55213ddfda5fe2879530da0fb06e08472f1
Author: Alexandre Mestiashvili <alex at biotec.tu-dresden.de>
Date:   Thu May 31 17:52:40 2012 +0200

     normalized output of dpkg-architecture,
     so for example kfreebsd-amd64 is detected as an amd64 architecture
     and msse flag is set.

diff --git a/debian/changelog b/debian/changelog
index ce0c0b1..3f2c60c 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,3 +1,11 @@
+bowtie2 (2.0.0-beta6-2) unstable; urgency=low
+
+  * debian/rules normalized output of dpkg-architecture,  
+    so for example kfreebsd-amd64 is detected as an amd64 architecture 
+    and sse flags are enabled for it.
+
+ -- Alexandre Mestiashvili <alex at biotec.tu-dresden.de>  Thu, 31 May 2012 19:22:56 +0200
+
 bowtie2 (2.0.0-beta6-1) unstable; urgency=low
 
   * updated debian/watch and get-orig-source to track -source suffix
diff --git a/debian/rules b/debian/rules
index c9c2fdf..099300f 100755
--- a/debian/rules
+++ b/debian/rules
@@ -1,7 +1,7 @@
 #!/usr/bin/make -f
 
 pkg := $(shell dpkg-parsechangelog | sed -n 's/^Source: //p')
-arch := $(shell dpkg-architecture -qDEB_HOST_ARCH 2>/dev/null)
+arch := $(shell dpkg-architecture -qDEB_HOST_ARCH 2>/dev/null | awk -F- '{print $1}')
 
 # ENABLE_SSE=0
 ifeq ($(arch),i386)

-- 
ultrafast memory-efficient short read aligner