[med-svn] [SCM] bowtie2 annotated tag, precise-ppa/2.0.2-1_precise1, created. precise-ppa/2.0.2-1_precise1

[Carlos Borroto]

The annotated tag, precise-ppa/2.0.2-1_precise1 has been created
        at  377189ad95a9d05f76e29d932affa7aa9a19af57 (tag)
   tagging  0ed11a2b60032b5bd122e14a26b11bcb626b00ae (commit)
  replaces  upstream/2.0.2
 tagged by  Carlos Borroto
        on  Mon Nov 5 18:33:26 2012 -0500

- Shortlog ------------------------------------------------------------
Debian release 2.0.2-1~precise1

Alexandre Mestiashvili (29):
      added debian/ directory
      added myself to uploaders, debhepler version 8, Standards-Vesrion 3.9.2
      set to UNRELEASED, debian/rules help2man for missing man pages
      Fixed minor linitan complains , added ls.h to debain/copyright
      Merge branch 'master' of git+ssh://git.debian.org/git/debian-med/bowtie2
      NEWS removed from bowtie2.docs and used as Upstream's changelog
      Added debian/upstream
      debian/rules using commit of Andreas
      added information about sse_util.h with mising license statement
      uname -m doesn't detect 32 bit chroot env
      added patch fixing #672090
      fixed too-long line in changelog, added versioned URI format for copyright
      updated changelog to reflect git changes
      updated debian/watch and get-orig-source to track -source suffix
      Merge tag 'upstream/2.0.0-beta6'
      add -msse2 only for intel architectures
      updated debian/changelog
      normalized output of dpkg-architecture,
      normalized architecture detection
      updated changelog
      debian/control only i386* and amd64* architecures are supported
      debhelper v9
      debian/rules added hardening flags
      hardening.patch to inject hardening CPPFLAGS
      Merge tag 'upstream/2.0.0-beta7'
      changelog update
      overrided lintian's warning
      added autopkgtest framework support
      updated changelog to reflect cahnages for 2.0.0-beta7-1

Andreas Tille (6):
      More elegant way to specify package name, hope you like this - feel free to revert this suggestion
      Replaced last inctance of bowtie2 by $(pkg)
      Upload to unstable
      Added my "publication of the day"
      prevent -mXX and -msse2 switches for non Intel architectures
      Upload to unstable

Carlos Borroto (7):
      dropped beta for source files handling in get-orig-source and watch files
      Merge tag 'upstream/2.0.2'
      removed patch bowtie2_gcc4.7, fixed in upstream
      updated changelog to 2.0.2
      added myself to uploaders
      small typo fix in debian/changelog
      Uploaded bowtie2_2.0.2-1~precise1_source.changes to Debian Med's PPA

Charles Plessy (2):
      Removed unused Lintian override (relevant to beta versions).
      Signal the use of git-buildpackage, and turn on pristine-tar by default.

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