[med-svn] [SCM] tophat annotated tag, debian/2.0.6-1, created. debian/2.0.6-1

[Charles Plessy]

The annotated tag, debian/2.0.6-1 has been created
        at  c15581dce9c892cf4ea5d6a7498eef4be071d829 (tag)
   tagging  26feedb7e8f184b78ab942714a63fc41d56011f0 (commit)
  replaces  debian/1.4.1-1
 tagged by  Charles Plessy
        on  Tue Nov 6 17:57:11 2012 +0900

- Shortlog ------------------------------------------------------------
tophat (2.0.6-1) unstable; urgency=low

  * Team upload

  [ Carlos Borroto ]
  * Imported Upstream version 2.0.6

 -- Charles Plessy <plessy at debian.org>  Tue, 06 Nov 2012 14:54:31 +0900
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Alexandre Mestiashvili (15):
      Imported Upstream version 2.0.0
      Merge tag 'upstream/2.0.0'
      updated debian/patches
      debian/control added libboost-thread-dev dependency
      debian/control Standards-Version: 3.9.3 Depends: bowtie2
      debian/get-orig-source - removes shipped with tophat SeqAn files.
      Merge tag 'upstream/2.0.3'
      Imported Upstream version 2.0.3
      tophat depends on bowtie or bowtie2
      refreshed debian/patches/fix_includes_path.patch
      unreleased->unstable
      Imported Upstream version 2.0.5
      Merge tag 'upstream/2.0.5'
      ready for upload to unstable
      updated source filed

Andreas Tille (12):
      Add patch for #660309 provided by Peter Green
      Fix bug in changelog
      Added myself as bug reviewer
      Mention author of patch in changelog
      Add name to e-mail in upstream contact
      Added references in debian/upstream file
      Upload to unstable
      BibTeX conform author syntax
      Fix bashism in shell script. UNTESTED - PLEASE TEST
      Debhelper 9; upload to unstable
      Add some manpages via help2man - please follow these examples and add more
      Prevent error message piped into manpage

Carlos Borroto (9):
      adds bowtie as a dependency and recommends cufflinks
      Make cufflinks a suggests and not a recommends
      Imported Upstream version 2.0.4
      Merge tag 'upstream/2.0.4'
      patch bashism_in_shell_script refreshed
      updated changelog to version 2.0.4
      Imported Upstream version 2.0.6
      Merge tag 'upstream/2.0.6'
      updated changelog to 2.0.6

Charles Plessy (2):
      YAML syntax correction
      tophat (2.0.6-1) unstable; urgency=low

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-- 
A spliced read mapper for RNA-Seq