[med-svn] r12225 - trunk/packages/pscan/trunk/debian
Andreas Tille
tille at alioth.debian.org
Wed Sep 19 06:36:32 UTC 2012
Author: tille
Date: 2012-09-19 06:36:32 +0000 (Wed, 19 Sep 2012)
New Revision: 12225
Removed:
trunk/packages/pscan/trunk/debian/README.source
Modified:
trunk/packages/pscan/trunk/debian/README.Debian
trunk/packages/pscan/trunk/debian/changelog
trunk/packages/pscan/trunk/debian/control
Log:
As it is mentioned in the ITP bug #673182 there is a name conflict with the just existing package pscan. I followed the recommendation of Charles Plessy and renamed the package to pscan-tfbs.
Modified: trunk/packages/pscan/trunk/debian/README.Debian
===================================================================
--- trunk/packages/pscan/trunk/debian/README.Debian 2012-09-18 05:59:44 UTC (rev 12224)
+++ trunk/packages/pscan/trunk/debian/README.Debian 2012-09-19 06:36:32 UTC (rev 12225)
@@ -1,6 +1,10 @@
-pscan for Debian
-----------------
+pscan-tfbs for Debian
+---------------------
+Please note that on Debian systems we can not use the name pscan because
+there is another package with the very same name. So the package is
+renamed to pscan-tfbs.
+
Pscan depends on a transcription factor binding site description. The
database "JASPAR" can be downloaded with the Debian 'getData' interface.
Deleted: trunk/packages/pscan/trunk/debian/README.source
===================================================================
--- trunk/packages/pscan/trunk/debian/README.source 2012-09-18 05:59:44 UTC (rev 12224)
+++ trunk/packages/pscan/trunk/debian/README.source 2012-09-19 06:36:32 UTC (rev 12225)
@@ -1,9 +0,0 @@
-pscan for Debian
-----------------
-
-<this file describes information about the source package, see Debian policy
-manual section 4.14. You WILL either need to modify or delete this file>
-
-
-
-
Modified: trunk/packages/pscan/trunk/debian/changelog
===================================================================
--- trunk/packages/pscan/trunk/debian/changelog 2012-09-18 05:59:44 UTC (rev 12224)
+++ trunk/packages/pscan/trunk/debian/changelog 2012-09-19 06:36:32 UTC (rev 12225)
@@ -1,4 +1,4 @@
-pscan (1.2.1-1) unstable; urgency=low
+pscan-tfbs (1.2.1-1) unstable; urgency=low
* Initial release (Closes: #673182)
Modified: trunk/packages/pscan/trunk/debian/control
===================================================================
--- trunk/packages/pscan/trunk/debian/control 2012-09-18 05:59:44 UTC (rev 12224)
+++ trunk/packages/pscan/trunk/debian/control 2012-09-19 06:36:32 UTC (rev 12225)
@@ -1,6 +1,6 @@
-Source: pscan
+Source: pscan-tfbs
Section: science
-Priority: extra
+Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
DM-Upload-Allowed: yes
Uploaders: Steffen Moeller <moeller at debian.org>
@@ -11,18 +11,18 @@
Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/pscan/trunk/
-Package: pscan
+Package: pscan-tfbs
Architecture: any
Depends: ${shlibs:Depends}, ${misc:Depends}
Description: search for transcription factor binding sites
- pscan finds Over-represented Transcription Factor Binding Site Motifs
+ Pscan finds Over-represented Transcription Factor Binding Site Motifs
in Sequences from Co-Regulated or Co-Expressed Genes.
-Package: pscan-dbg
+Package: pscan-tfbs-dbg
Architecture: any
-Depends: pscan
+Depends: pscan-tfbs
Section: debug
-Description: debug symbols for pscan
+Description: debug symbols for pscan-tfbs
This package provides symbols as an annotation to the binary code,
which helps the communication between users who experience a problem
with the package and a developer attempting to understand and fix
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