[med-svn] r12233 - trunk/packages/seaview/trunk/debian

[Charles Plessy]

Author: plessy
Date: 2012-09-20 04:25:47 +0000 (Thu, 20 Sep 2012)
New Revision: 12233

Modified:
   trunk/packages/seaview/trunk/debian/changelog
   trunk/packages/seaview/trunk/debian/control
Log:
Recommend Clustal Omega instead of Clustal W.


Modified: trunk/packages/seaview/trunk/debian/changelog
===================================================================
--- trunk/packages/seaview/trunk/debian/changelog	2012-09-20 04:24:01 UTC (rev 12232)
+++ trunk/packages/seaview/trunk/debian/changelog	2012-09-20 04:25:47 UTC (rev 12233)
@@ -13,6 +13,7 @@
 
   [ Charles Plessy ]
   * debian/patches/use-dpkg-buildflags.patch: removed parts adopted upstream.
+  * debian/conrtrol: recommend Clustal Omega instead of Clustal W.
 
  -- Andreas Tille <tille at debian.org>  Sun, 01 Apr 2012 09:38:55 +0200
 

Modified: trunk/packages/seaview/trunk/debian/control
===================================================================
--- trunk/packages/seaview/trunk/debian/control	2012-09-20 04:24:01 UTC (rev 12232)
+++ trunk/packages/seaview/trunk/debian/control	2012-09-20 04:25:47 UTC (rev 12233)
@@ -16,12 +16,12 @@
 Package: seaview
 Architecture: i386 amd64 armel
 Depends: ${shlibs:Depends}, ${misc:Depends}
-Recommends: clustalw, muscle, phyml
+Recommends: clustalo, muscle, phyml
 Description: Multiplatform interface for sequence alignment and phylogeny
  SeaView reads and writes various file formats (NEXUS, MSF, CLUSTAL, FASTA,
  PHYLIP, MASE, Newick) of DNA and protein sequences and of phylogenetic trees.
- Alignments can be manually edited. It drives the programs Muscle or Clustal W
- for multiple sequence alignment, and also allows one to use any external
+ Alignments can be manually edited. It drives the programs Muscle or Clustal
+ Omega for multiple sequence alignment, and also allows one to use any external
  alignment algorithm able to read and write FASTA-formatted files. It computes
  phylogenetic trees by parsimony using PHYLIP's dnapars/protpars algorithm, by
  distance with NJ or BioNJ algorithms on a variety of evolutionary distances, or