[med-svn] r13398 - in trunk/packages/R/r-bioc-hilbertvis/tags: . 1.18.0-1/debian

Charles Plessy plessy at alioth.debian.org
Wed Apr 24 12:46:10 UTC 2013


Author: plessy
Date: 2013-04-24 12:46:09 +0000 (Wed, 24 Apr 2013)
New Revision: 13398

Added:
   trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/
   trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/changelog
   trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/compat
   trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/control
   trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/copyright
Removed:
   trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/changelog
   trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/compat
   trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/control
   trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/copyright
Log:
[svn-buildpackage] Tagging r-bioc-hilbertvis 1.18.0-1

Deleted: trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/trunk/debian/changelog	2013-04-24 09:09:52 UTC (rev 13390)
+++ trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/changelog	2013-04-24 12:46:09 UTC (rev 13398)
@@ -1,61 +0,0 @@
-r-bioc-hilbertvis (1.14.0-1) unstable; urgency=low
-
-  [ Charles Plessy ]
-  * Track stable version (debian/watch).
-  * Corrected VCS URLs (debian/control).
-
-  [ Andreas Tille ]
-  * New upstream version
-  * debian/watch: Make sure source will be really downloaded
-
- -- Andreas Tille <tille at debian.org>  Thu, 19 Apr 2012 14:42:44 +0200
-
-r-bioc-hilbertvis (1.13.1-1) unstable; urgency=low
-
-  * New upstream version
-  * debian/control:
-    - Standards-Version: 3.9.3 (no changes needed)
-    - Build-Depends: r-base-dev (>= 2.14.2~20120222)
-  * Debhelper 8 (control+compat)
-  * debian/rules:
-    - Remove R:Depends substitution variable which is now
-      included in /usr/share/R/debian/r-cran.mk
-    - Code is trivial enough to remove licensing comment
-  * debian/copyright: Rewritten to match DEP5 and verified using
-      cme fix dpkg-copyright
-  * debian/upstream: Used
-      citation("HilbertVis")
-    to get citation information
-  * mv debian/README.Debian debian/README.test
-    because it is about testing (and install via debian/docs)
-
- -- Andreas Tille <tille at debian.org>  Fri, 23 Mar 2012 22:18:23 +0100
-
-r-bioc-hilbertvis (1.9.0-1) unstable; urgency=low
-
-  * New upstream version
-  * debian/copyright: Fix download location
-  * Added watch file
-  * Debhelper 7
-  * debian/control:
-    - Standards-Version: 3.9.1 (no changes needed)
-    - Depends: ${R:Depends}
-  * debian/rules:
-    - Create substvars file
-    - Fix cut-n-pasto in header information
-  * Source format 3.0 (quilt)
-  * Added README.Debian how this package can be tested
-
- -- Andreas Tille <tille at debian.org>  Tue, 16 Nov 2010 09:58:10 +0100
-
-r-bioc-hilbertvis (1.5.0-2) unstable; urgency=low
-
-  * Fixing missing dependency on lattice. (Closes: #557031)
-
- -- Steffen Moeller <moeller at debian.org>  Thu, 19 Nov 2009 12:29:05 +0100
-
-r-bioc-hilbertvis (1.5.0-1) unstable; urgency=low
-
-  * Initial release (Closes: #555921).
-  
- -- Steffen Moeller <moeller at debian.org>  Thu, 12 Nov 2009 15:15:08 +0100

Copied: trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/changelog (from rev 13397, trunk/packages/R/r-bioc-hilbertvis/trunk/debian/changelog)
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/changelog	                        (rev 0)
+++ trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/changelog	2013-04-24 12:46:09 UTC (rev 13398)
@@ -0,0 +1,72 @@
+r-bioc-hilbertvis (1.18.0-1) unstable; urgency=low
+
+  * Team upload.
+  * New upstream release.
+  * Normalised debian/control with cme.
+  * Use Debhelper 9.
+  * Normalised VCS URLs following Lintians standard.
+  * Conforms to Policy 3.9.4.
+
+ -- Charles Plessy <plessy at debian.org>  Wed, 24 Apr 2013 21:37:36 +0900
+
+r-bioc-hilbertvis (1.14.0-1) unstable; urgency=low
+
+  [ Charles Plessy ]
+  * Track stable version (debian/watch).
+  * Corrected VCS URLs (debian/control).
+
+  [ Andreas Tille ]
+  * New upstream version
+  * debian/watch: Make sure source will be really downloaded
+
+ -- Andreas Tille <tille at debian.org>  Thu, 19 Apr 2012 14:42:44 +0200
+
+r-bioc-hilbertvis (1.13.1-1) unstable; urgency=low
+
+  * New upstream version
+  * debian/control:
+    - Standards-Version: 3.9.3 (no changes needed)
+    - Build-Depends: r-base-dev (>= 2.14.2~20120222)
+  * Debhelper 8 (control+compat)
+  * debian/rules:
+    - Remove R:Depends substitution variable which is now
+      included in /usr/share/R/debian/r-cran.mk
+    - Code is trivial enough to remove licensing comment
+  * debian/copyright: Rewritten to match DEP5 and verified using
+      cme fix dpkg-copyright
+  * debian/upstream: Used
+      citation("HilbertVis")
+    to get citation information
+  * mv debian/README.Debian debian/README.test
+    because it is about testing (and install via debian/docs)
+
+ -- Andreas Tille <tille at debian.org>  Fri, 23 Mar 2012 22:18:23 +0100
+
+r-bioc-hilbertvis (1.9.0-1) unstable; urgency=low
+
+  * New upstream version
+  * debian/copyright: Fix download location
+  * Added watch file
+  * Debhelper 7
+  * debian/control:
+    - Standards-Version: 3.9.1 (no changes needed)
+    - Depends: ${R:Depends}
+  * debian/rules:
+    - Create substvars file
+    - Fix cut-n-pasto in header information
+  * Source format 3.0 (quilt)
+  * Added README.Debian how this package can be tested
+
+ -- Andreas Tille <tille at debian.org>  Tue, 16 Nov 2010 09:58:10 +0100
+
+r-bioc-hilbertvis (1.5.0-2) unstable; urgency=low
+
+  * Fixing missing dependency on lattice. (Closes: #557031)
+
+ -- Steffen Moeller <moeller at debian.org>  Thu, 19 Nov 2009 12:29:05 +0100
+
+r-bioc-hilbertvis (1.5.0-1) unstable; urgency=low
+
+  * Initial release (Closes: #555921).
+  
+ -- Steffen Moeller <moeller at debian.org>  Thu, 12 Nov 2009 15:15:08 +0100

Deleted: trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/compat
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/trunk/debian/compat	2013-04-24 09:09:52 UTC (rev 13390)
+++ trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/compat	2013-04-24 12:46:09 UTC (rev 13398)
@@ -1 +0,0 @@
-8

Copied: trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/compat (from rev 13393, trunk/packages/R/r-bioc-hilbertvis/trunk/debian/compat)
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/compat	                        (rev 0)
+++ trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/compat	2013-04-24 12:46:09 UTC (rev 13398)
@@ -0,0 +1 @@
+9

Deleted: trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/control
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/trunk/debian/control	2013-04-24 09:09:52 UTC (rev 13390)
+++ trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/control	2013-04-24 12:46:09 UTC (rev 13398)
@@ -1,25 +0,0 @@
-Source: r-bioc-hilbertvis
-Section: math
-Priority: optional
-Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
-Uploaders: Steffen Moeller <moeller at debian.org>,
- Andreas Tille <tille at debian.org>
-Build-Depends: debhelper (>= 8), cdbs, r-base-dev (>= 2.14.2~20120222), r-cran-lattice
-Standards-Version: 3.9.3
-Homepage: http://www.ebi.ac.uk/huber-srv/hilbert
-Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-bioc-hilbertvis/trunk/
-Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/R/r-bioc-hilbertvis/trunk/
-
-Package: r-bioc-hilbertvis
-Architecture: any
-Depends: ${shlibs:Depends}, ${R:Depends}, r-cran-lattice
-Description: GNU R package to visualise long vector data
- This tool allows one to display very long data vectors in a space-efficient
- manner, by organising it along a 2D Hilbert curve. The user can then 
- visually judge the large scale structure and distribution of features
- simultaenously with the rough shape and intensity of individual features.
- .
- In bioinformatics, a typical use case is ChIP-Chip and ChIP-Seq,
- or basically all the kinds of genomic data, that are conventionally
- displayed as quantitative track ("wiggle data") in genome browsers such
- as those provided by Ensembl or UCSC.

Copied: trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/control (from rev 13396, trunk/packages/R/r-bioc-hilbertvis/trunk/debian/control)
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/control	                        (rev 0)
+++ trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/control	2013-04-24 12:46:09 UTC (rev 13398)
@@ -0,0 +1,31 @@
+Source: r-bioc-hilbertvis
+Maintainer: Debian-Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Steffen Moeller <moeller at debian.org>,
+           Andreas Tille <tille at debian.org>
+Section: math
+Priority: optional
+Build-Depends: debhelper (>= 9),
+               cdbs,
+               r-base-dev (>= 2.14.2~20120222),
+               r-cran-lattice
+Standards-Version: 3.9.4
+Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-hilbertvis/trunk/
+Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-hilbertvis/trunk/
+Homepage: http://www.ebi.ac.uk/huber-srv/hilbert
+
+Package: r-bioc-hilbertvis
+Architecture: any
+Depends: ${shlibs:Depends},
+         ${R:Depends},
+         r-cran-lattice
+Description: GNU R package to visualise long vector data
+ This tool allows one to display very long data vectors in a space-efficient
+ manner, by organising it along a 2D Hilbert curve. The user can then 
+ visually judge the large scale structure and distribution of features
+ simultaenously with the rough shape and intensity of individual features.
+ .
+ In bioinformatics, a typical use case is ChIP-Chip and ChIP-Seq,
+ or basically all the kinds of genomic data, that are conventionally
+ displayed as quantitative track ("wiggle data") in genome browsers such
+ as those provided by Ensembl or UCSC.
+

Deleted: trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/copyright
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/trunk/debian/copyright	2013-04-24 09:09:52 UTC (rev 13390)
+++ trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/copyright	2013-04-24 12:46:09 UTC (rev 13398)
@@ -1,31 +0,0 @@
-Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
-Upstream-Name: HilbertVis
-Upstream-Contact: Simon Anders <sanders at fs.tum.de>
-Source: http://www.bioconductor.org/packages/devel/bioc/html/HilbertVis.html
-
-Files: *
-Copyright: 2009-2012 Simon Anders <sanders at fs.tum.de>;
-                     European Bioinformatics Institute (EBI)
-License: GPL3+
-
-Files: debian/*
-Copyright: 2009 Steffen Moeller <moeller at debian.org>,
-           2009-2012 Andreas Tille <tille at debian.org>
-License: GPL3+
-
-License: GPL3+
- This program is free software: you can redistribute it and/or modify
- it under the terms of the GNU General Public License as published by
- the Free Software Foundation, either version 3 of the License, or
- (at your option) any later version.
- .
- This program is distributed in the hope that it will be useful,
- but WITHOUT ANY WARRANTY; without even the implied warranty of
- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- GNU General Public License for more details.
- .
- You should have received a copy of the GNU General Public License
- along with this program.  If not, see <http://www.gnu.org/licenses/>.
- .
-  On a Debian system, the GNU GPL license is distributed in the file
- ‘/usr/share/common-licenses/GPL’.

Copied: trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/copyright (from rev 13391, trunk/packages/R/r-bioc-hilbertvis/trunk/debian/copyright)
===================================================================
--- trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/copyright	                        (rev 0)
+++ trunk/packages/R/r-bioc-hilbertvis/tags/1.18.0-1/debian/copyright	2013-04-24 12:46:09 UTC (rev 13398)
@@ -0,0 +1,31 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: HilbertVis
+Upstream-Contact: Simon Anders <sanders at fs.tum.de>
+Source: http://www.bioconductor.org/packages/release/bioc/src/contrib/HilbertVis_1.18.0.tar.gz
+
+Files: *
+Copyright: 2009-2012 Simon Anders <sanders at fs.tum.de>;
+                     European Bioinformatics Institute (EBI)
+License: GPL3+
+
+Files: debian/*
+Copyright: 2009 Steffen Moeller <moeller at debian.org>,
+           2009-2012 Andreas Tille <tille at debian.org>
+License: GPL3+
+
+License: GPL3+
+ This program is free software: you can redistribute it and/or modify
+ it under the terms of the GNU General Public License as published by
+ the Free Software Foundation, either version 3 of the License, or
+ (at your option) any later version.
+ .
+ This program is distributed in the hope that it will be useful,
+ but WITHOUT ANY WARRANTY; without even the implied warranty of
+ MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ GNU General Public License for more details.
+ .
+ You should have received a copy of the GNU General Public License
+ along with this program.  If not, see <http://www.gnu.org/licenses/>.
+ .
+  On a Debian system, the GNU GPL license is distributed in the file
+ ‘/usr/share/common-licenses/GPL’.




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