[med-svn] r13425 - trunk/packages/metastudent-data/trunk/debian

Fri Apr 26 05:57:25 UTC 2013

Author: lkajan
Date: 2013-04-26 05:57:25 +0000 (Fri, 26 Apr 2013)
New Revision: 13425

Added:
   trunk/packages/metastudent-data/trunk/debian/changelog
   trunk/packages/metastudent-data/trunk/debian/compat
   trunk/packages/metastudent-data/trunk/debian/control
   trunk/packages/metastudent-data/trunk/debian/copyright
   trunk/packages/metastudent-data/trunk/debian/rules
   trunk/packages/metastudent-data/trunk/debian/upstream
   trunk/packages/metastudent-data/trunk/debian/watch
Log:
initial Debianization

Added: trunk/packages/metastudent-data/trunk/debian/changelog
===================================================================

--- trunk/packages/metastudent-data/trunk/debian/changelog	                        (rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/changelog	2013-04-26 05:57:25 UTC (rev 13425)
@@ -0,0 +1,5 @@
+metastudent-data (1.0.1-1) UNRELEASED; urgency=low
+
+  * Initial release (Closes: #000000)
+
+ -- Tobias Hamp <hampt at rostlab.org>  Fri, 26 Apr 2013 07:43:57 +0200

Added: trunk/packages/metastudent-data/trunk/debian/compat
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/compat	                        (rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/compat	2013-04-26 05:57:25 UTC (rev 13425)
@@ -0,0 +1 @@
+8


Property changes on: trunk/packages/metastudent-data/trunk/debian/compat
___________________________________________________________________
Added: svn:executable
   + *

Added: trunk/packages/metastudent-data/trunk/debian/control
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/control	                        (rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/control	2013-04-26 05:57:25 UTC (rev 13425)
@@ -0,0 +1,25 @@
+Source: metastudent-data
+Section: science
+Priority: optional
+Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
+Uploaders: Tobias Hamp <hampt at rostlab.org>, Laszlo Kajan <lkajan at debian.org>
+Build-Depends-Indep: debhelper (>=8~)
+Standards-Version: 3.9.4
+Homepage: https://rostlab.org/owiki/index.php/Metastudent
+Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/metastudent-data/trunk/
+Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/metastudent-data/trunk/
+
+Package: metastudent-data
+Architecture: all
+Homepage: http://www.rostlab.org
+Depends: ${misc:Depends}
+Description: predictor of Gene Ontology terms from protein sequence - data files
+ Often, only the sequence of a protein is known, but 
+ not its functions. Metastudent will try to predict 
+ missing functional annotations through homology searches (BLAST).
+ .
+ All predicted functions correspond to Gene Ontology (GO) 
+ terms from the Molecular Function Ontology (MFO) and the Biological Process
+ Ontology (BPO) and are associated with a reliability score.
+ .
+ This package contains data files for metastudent.

Added: trunk/packages/metastudent-data/trunk/debian/copyright
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/copyright	                        (rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/copyright	2013-04-26 05:57:25 UTC (rev 13425)
@@ -0,0 +1,25 @@
+Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
+Upstream-Name: metastudent-data
+Upstream-Contact: Tobias Hamp <hampt at rostlab.org>
+Source: ftp://rostlab.org/metastudent/
+
+Files: *
+Copyright: 2011-2013, Tobias Hamp <hampt at rostlab.org>
+License: GPL-2+
+
+License: GPL-2+
+    This package is free software; you can redistribute it and/or modify
+    it under the terms of the GNU General Public License as published by
+    the Free Software Foundation; either version 2 of the License, or
+    (at your option) any later version.
+    .
+    This package is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+    GNU General Public License for more details.
+    .  
+    You should have received a copy of the GNU General Public License
+    along with this package; if not, see .
+    .
+    On Debian systems, the complete text of the GNU General Public
+    License version 2 can be found in `/usr/share/common-licenses/GPL-2'

Added: trunk/packages/metastudent-data/trunk/debian/rules
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/rules	                        (rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/rules	2013-04-26 05:57:25 UTC (rev 13425)
@@ -0,0 +1,12 @@
+#!/usr/bin/make -f
+# Uncomment this to turn on verbose mode.
+#export DH_VERBOSE=1
+
+%:
+	dh $@
+
+override_dh_auto_build:
+	echo TODO >&2
+
+override_dh_auto_install:
+	echo TODO >&2


Property changes on: trunk/packages/metastudent-data/trunk/debian/rules
___________________________________________________________________
Added: svn:executable
   + *

Added: trunk/packages/metastudent-data/trunk/debian/upstream
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/upstream	                        (rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/upstream	2013-04-26 05:57:25 UTC (rev 13425)
@@ -0,0 +1,14 @@
+Name: metastudent-data
+Contact: Tobias Hamp <hampt at rostlab.org>
+Homepage: https://rostlab.org/owiki/index.php/Metastudent
+Reference:
+ - Author: Tobias Hamp and Rebecca Kassner and Stefan Seemayer and Esmeralda Vicedo and Christian Schaefer and Dominik Achten and Florian Auer and Ariane Boehm and Tatjana Braun and Maximilian Hecht and Mark Heron and Peter Hönigschmid and Thomas A. Hopf and Stefanie Kaufmann and Michael Kiening and Denis Krompass and Cedric Landerer and Yannick Mahlich and Manfred Roos and Burkhard Rost
+   Title: 'Homology-based inference sets the bar high for protein function prediction.'
+   Journal: BMC Bioinformatics
+   Year: 2013
+   Volume: 14
+   Number: 'Suppl 3'
+   Pages: S7
+   DOI: 10.1186/1471-2105-14-S3-S7
+   PMID: 23514582
+   URL: http://www.biomedcentral.com/1471-2105/14/S3/S7/

Added: trunk/packages/metastudent-data/trunk/debian/watch
===================================================================
--- trunk/packages/metastudent-data/trunk/debian/watch	                        (rev 0)
+++ trunk/packages/metastudent-data/trunk/debian/watch	2013-04-26 05:57:25 UTC (rev 13425)
@@ -0,0 +1,2 @@
+version=3
+opts=pasv ftp://rostlab.org/metastudent/metastudent-data-([0-9.]+)\.tar\.[bgx]z debian uupdate


