[med-svn] [r-bioc-limma] 01/01: Build logs for 3.16.7~dfsg-1.
Charles Plessy
plessy at alioth.debian.org
Mon Aug 5 09:51:37 UTC 2013
This is an automated email from the git hooks/post-receive script.
plessy pushed a commit to branch meta
in repository r-bioc-limma.
commit 31348143cabae2a366ca0fe8541604118db39930
Author: Charles Plessy <plessy at debian.org>
Date: Mon Aug 5 18:50:20 2013 +0900
Build logs for 3.16.7~dfsg-1.
---
armel.log | 1227 +++++++++++++++--------------
armhf.log | 1190 ++++++++++++++--------------
hurd-i386.log | 745 +++++++++---------
i386.log | 1114 +++++++++++++++------------
ia64.log | 1170 +++++++++++++++-------------
info | 26 +-
kfreebsd-amd64.log | 1259 ++++++++++++++----------------
kfreebsd-i386.log | 1139 +++++++++++++--------------
mips.log | 2176 ++++++++++++++++++++++++++++------------------------
mipsel.log | 1161 +++++++++++++++-------------
powerpc.log | 1155 ++++++++++++++--------------
s390.log | 2146 ++++++++++++++++++++++++++-------------------------
s390x.log | 1159 +++++++++++++++-------------
sparc.log | 1159 ++++++++++++++--------------
14 files changed, 8744 insertions(+), 8082 deletions(-)
diff --git a/armel.log b/armel.log
index d331bdb..54110f7 100644
--- a/armel.log
+++ b/armel.log
@@ -1,67 +1,75 @@
-From buildd at ancina.debian.org Fri May 17 15:14:52 2013
-Return-path: <buildd at ancina.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
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Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Fri, 17 May 2013 15:14:44 +0000
-From: buildd on ancina <buildd at ancina.debian.org>
-To: buildd-porters at ancina.debian.org,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on armel
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 10:10:29 +0000
+From: buildd on arnold <buildd at arnold.debian.org>
+To: buildd-porters at arnold.debian.org,logs at buildd.debian.org
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on armel
(dist=sid)
-Key-Id: 06BDA360
+Key-Id: CF1DCD8E
+Message-Id: <E1V5vGg-00037Z-2e at arnold.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on ancina.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on arnold.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (armel) 17 May 2013 15:10 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (armel) 04 Aug 2013 09:57 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: armel
-Get:1 http://ftp.de.debian.org sid InRelease [205 kB]
-Get:2 http://incoming.debian.org sid InRelease [205 kB]
-Hit http://ftp.de.debian.org sid/main Sources/DiffIndex
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: armel
+Host Architecture: armel
+Build Architecture: armel
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-AUiuOO/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-AUiuOO' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-armel-sbuild-4120d77e-4c96-44cf-8c34-7184431c855d' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://ftp.uk.debian.org unstable InRelease [204 kB]
+Get:2 http://incoming.debian.org unstable InRelease [204 kB]
Get:3 http://incoming.debian.org buildd-unstable InRelease [111 kB]
-Hit http://ftp.de.debian.org sid/contrib Sources/DiffIndex
-Hit http://ftp.de.debian.org sid/main armel Packages/DiffIndex
-Hit http://ftp.de.debian.org sid/contrib armel Packages/DiffIndex
-Hit http://ftp.de.debian.org sid/contrib Translation-en/DiffIndex
-Hit http://ftp.de.debian.org sid/main Translation-en/DiffIndex
-Hit http://incoming.debian.org sid/main Sources/DiffIndex
-Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
-Hit http://incoming.debian.org sid/main armel Packages/DiffIndex
-Hit http://incoming.debian.org sid/contrib armel Packages/DiffIndex
-Hit http://incoming.debian.org sid/contrib Translation-en/DiffIndex
-Hit http://incoming.debian.org sid/main Translation-en/DiffIndex
-Get:4 http://incoming.debian.org buildd-unstable/main Sources [107 kB]
-Get:5 http://incoming.debian.org buildd-unstable/contrib Sources [873 B]
-Get:6 http://incoming.debian.org buildd-unstable/main armel Packages [58.6 kB]
-Get:7 http://incoming.debian.org buildd-unstable/contrib armel Packages [14 B]
-Get:8 http://incoming.debian.org buildd-unstable/contrib Translation-en [585 B]
-Get:9 http://incoming.debian.org buildd-unstable/main Translation-en [78.6 kB]
-Fetched 766 kB in 17s (44.6 kB/s)
+Get:4 http://ftp.uk.debian.org unstable/main Sources [6890 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:6 http://ftp.uk.debian.org unstable/contrib Sources [55.4 kB]
+Get:7 http://ftp.uk.debian.org unstable/non-free Sources [105 kB]
+Get:8 http://ftp.uk.debian.org unstable/main armel Packages [6286 kB]
+Get:9 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:10 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:11 http://incoming.debian.org unstable/main armel Packages [6286 kB]
+Get:12 http://ftp.uk.debian.org unstable/contrib armel Packages [37.5 kB]
+Get:13 http://incoming.debian.org unstable/contrib armel Packages [37.5 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [101 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2795 B]
+Get:17 http://incoming.debian.org buildd-unstable/main armel Packages [79.8 kB]
+Get:18 http://incoming.debian.org buildd-unstable/contrib armel Packages [14 B]
+Fetched 27.5 MB in 2min 23s (191 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -81,205 +89,360 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://ftp.de.debian.org/debian/ sid/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://ftp.de.debian.org/debian/ sid/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://ftp.de.debian.org/debian/ sid/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 0s (1421 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (265 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-wc71oj/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: already installed (1.18.4-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libbogl0 libnewt0.52 libprocps0 mime-support
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
-Removing negative dependencies:
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 52 not upgraded.
+Need to get 0 B/710 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 10866 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-7zZP4L/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- libbogl0 libnewt0.52 libprocps0 mime-support
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.2)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-1)
-bsdutils: already installed (1:2.20.1-5.4)
-coreutils: already installed (8.13-3.3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.17-2)
-login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.4)
-ncurses-base: already installed (5.9+20130504-1)
-ncurses-bin: already installed (5.9+20130504-1)
-perl-base: already installed (5.14.2-21)
-sed: already installed (4.2.2-1)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-5)
-util-linux: already installed (2.20.1-5.4)
-libc6-dev: already installed (2.17-3)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130516
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libbogl0 libnewt0.52 libprocps0 mime-support
-Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
- file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base
- gfortran gfortran-4.6 groff-base html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3
- libdatrie1 libexpat1 libffi6 libfontconfig1 libfreetype6 libgettextpo-dev
- libgettextpo0 libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-dev libreadline-dev libreadline6-dev libsm6
- libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
+ bsdmainutils cdbs cpp cpp-4.8 debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core g++-4.8 gcc gcc-4.8 gcc-4.8-base gettext gettext-base
+ gfortran gfortran-4.8 groff-base intltool-debian libasan0 libasprintf0c2
+ libatomic1 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1
+ libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1 libfreetype6 libgbm1
+ libgcc-4.8-dev libgcc1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0a libice6
+ libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1
+ libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
+ libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6
+ libstdc++-4.8-dev libstdc++6 libthai-data libthai0 libtiff5 libtinfo-dev
+ libudev0 libunistring0 libwayland-client0 libwayland-server0 libx11-6
+ libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0 libxcb-render0
+ libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6
+ libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6 libxxf86vm1
+ man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- devscripts dh-make gettext-doc gfortran-doc gfortran-4.6-doc
- libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
- ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
- libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
- texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
- texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
- texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.8-locales dh-make
+ gcc-4.8-doc libstdc++6-4.8-dbg gcc-multilib manpages-dev autoconf
+ automake1.9 libtool flex bison gdb gcc-doc libmudflap0-4.8-dev libgcc1-dbg
+ libgomp1-dbg libitm1-dbg libatomic1-dbg libasan0-dbg libtsan0-dbg
+ libbacktrace1-dbg libquadmath-dbg libmudflap0-dbg gettext-doc gfortran-doc
+ gfortran-4.8-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
+ ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
+ ttf-arphic-bkai00mp libstdc++-4.8-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
+ texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
+ texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- libmail-sendmail-perl r-recommended r-doc-html xterm x-terminal-emulator
- libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
- x11-xserver-utils
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- cdbs debhelper file fontconfig fontconfig-config fonts-dejavu-core gettext
- gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian
- libasprintf-dev libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
- libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1 libfreetype6
- libgettextpo-dev libgettextpo0 libgfortran3 libglib2.0-0 libice6 libjbig0
+ bsdmainutils cdbs debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0
libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-dev libreadline-dev libreadline6-dev libsm6
- libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
- zlib1g-dev
-0 upgraded, 79 newly installed, 0 to remove and 8 not upgraded.
-Need to get 21.4 MB/52.3 MB of archives.
-After this operation, 119 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ sid/main r-base-dev all 3.0.1~20130512-1 [3910 B]
-Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-base-core armel 3.0.1-1 [21.4 MB]
-
Extracting templates from packages: 37%
Extracting templates from packages: 75%
Extracting templates from packages: 100%
-Preconfiguring packages ...
-Fetched 21.4 MB in 11s (1872 kB/s)
+ libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
+ libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
+ libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
+ libtiff5 libtinfo-dev libudev0 libunistring0 libwayland-client0
+ libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0
+ libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1
+ libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1
+ libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
+The following packages will be upgraded:
+ cpp cpp-4.8 g++-4.8 gcc gcc-4.8 gcc-4.8-base libasan0 libatomic1
+ libgcc-4.8-dev libgcc1 libgomp1 libstdc++-4.8-dev libstdc++6
+13 upgraded, 99 newly installed, 0 to remove and 39 not upgraded.
+Need to get 76.0 MB/76.0 MB of archives.
+After this operation, 126 MB of additional disk space will be used.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main libgomp1 armel 4.8.1-8 [30.1 kB]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.8-base armel 4.8.1-8 [151 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main libstdc++6 armel 4.8.1-8 [285 kB]
+Get:4 http://ftp.uk.debian.org/debian/ unstable/main libasan0 armel 4.8.1-8 [71.7 kB]
+Get:5 http://ftp.uk.debian.org/debian/ unstable/main libatomic1 armel 4.8.1-8 [6116 B]
+Get:6 http://ftp.uk.debian.org/debian/ unstable/main cpp-4.8 armel 4.8.1-8 [5400 kB]
+Get:7 http://ftp.uk.debian.org/debian/ unstable/main libstdc++-4.8-dev armel 4.8.1-8 [1824 kB]
+Get:8 http://ftp.uk.debian.org/debian/ unstable/main g++-4.8 armel 4.8.1-8 [5841 kB]
+Get:9 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.8 armel 4.8.1-8 [5880 kB]
+Get:10 http://ftp.uk.debian.org/debian/ unstable/main libgcc-4.8-dev armel 4.8.1-8 [329 kB]
+Get:11 http://ftp.uk.debian.org/debian/ unstable/main libgcc1 armel 1:4.8.1-8 [53.6 kB]
+Get:12 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 armel 1.2.4-1 [36.7 kB]
+Get:13 http://ftp.uk.debian.org/debian/ unstable/main libudev0 armel 175-7.2 [124 kB]
+Get:14 http://ftp.uk.debian.org/debian/ unstable/main groff-base armel 1.22.2-3 [674 kB]
+Get:15 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armel 9.0.5 [212 kB]
+Get:16 http://ftp.uk.debian.org/debian/ unstable/main man-db armel 2.6.5-2 [953 kB]
+Get:17 http://ftp.uk.debian.org/debian/ unstable/main libasprintf0c2 armel 0.18.3-1 [29.4 kB]
+Get:18 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armel 1:5.14-2 [214 kB]
+Get:19 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armel 2.9.1+dfsg1-2 [845 kB]
+Get:20 http://ftp.uk.debian.org/debian/ unstable/main libdrm2 armel 2.4.45-3 [466 kB]
+Get:21 http://ftp.uk.debian.org/debian/ unstable/main libglapi-mesa armel 9.1.4-1 [62.7 kB]
+Get:22 http://ftp.uk.debian.org/debian/ unstable/main libxau6 armel 1:1.0.8-1 [20.0 kB]
+Get:23 http://ftp.uk.debian.org/debian/ unstable/main libxdmcp6 armel 1:1.1.1-1 [25.3 kB]
+Get:24 http://ftp.uk.debian.org/debian/ unstable/main libxcb1 armel 1.9.1-3 [44.2 kB]
+Get:25 http://ftp.uk.debian.org/debian/ unstable/main libxcb-dri2-0 armel 1.9.1-3 [12.4 kB]
+Get:26 http://ftp.uk.debian.org/debian/ unstable/main libgbm1 armel 9.1.4-1 [318 kB]
+Get:27 http://ftp.uk.debian.org/debian/ unstable/main libffi6 armel 3.0.13-4 [19.6 kB]
+Get:28 http://ftp.uk.debian.org/debian/ unstable/main libwayland-client0 armel 1.1.0-2 [20.6 kB]
+Get:29 http://ftp.uk.debian.org/debian/ unstable/main libwayland-server0 armel 1.1.0-2 [27.9 kB]
+Get:30 http://ftp.uk.debian.org/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:31 http://ftp.uk.debian.org/debian/ unstable/main libx11-6 armel 2:1.6.0-1 [868 kB]
+Get:32 http://ftp.uk.debian.org/debian/ unstable/main libx11-xcb1 armel 2:1.6.0-1 [154 kB]
+Get:33 http://ftp.uk.debian.org/debian/ unstable/main libxcb-render0 armel 1.9.1-3 [17.5 kB]
+Get:34 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shape0 armel 1.9.1-3 [11.3 kB]
+Get:35 http://ftp.uk.debian.org/debian/ unstable/main libxcb-xfixes0 armel 1.9.1-3 [14.2 kB]
+Get:36 http://ftp.uk.debian.org/debian/ unstable/main libegl1-mesa armel 9.1.4-1 [75.4 kB]
+Get:37 http://ftp.uk.debian.org/debian/ unstable/main libexpat1 armel 2.1.0-4 [118 kB]
+Get:38 http://ftp.uk.debian.org/debian/ unstable/main libfreetype6 armel 2.4.9-1.1 [402 kB]
+Get:39 http://ftp.uk.debian.org/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:40 http://ftp.uk.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:41 http://ftp.uk.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:42 http://ftp.uk.debian.org/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:43 http://ftp.uk.debian.org/debian/ unstable/main libfontconfig1 armel 2.10.2-2 [309 kB]
+Get:44 http://ftp.uk.debian.org/debian/ unstable/main libxcb-glx0 armel 1.9.1-3 [28.3 kB]
+Get:45 http://ftp.uk.debian.org/debian/ unstable/main libxfixes3 armel 1:5.0.1-1 [21.2 kB]
+Get:46 http://ftp.uk.debian.org/debian/ unstable/main libxdamage1 armel 1:1.1.4-1 [14.7 kB]
+Get:47 http://ftp.uk.debian.org/debian/ unstable/main libxext6 armel 2:1.3.2-1 [50.9 kB]
+Get:48 http://ftp.uk.debian.org/debian/ unstable/main libxxf86vm1 armel 1:1.1.2-1+deb7u1 [21.0 kB]
+Get:49 http://ftp.uk.debian.org/debian/ unstable/main libgl1-mesa-glx armel 9.1.4-1 [130 kB]
+Get:50 http://ftp.uk.debian.org/debian/ unstable/main libpixman-1-0 armel 0.30.0-3 [492 kB]
+Get:51 http://ftp.uk.debian.org/debian/ unstable/main libpng12-0 armel 1.2.49-4 [182 kB]
+Get:52 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shm0 armel 1.9.1-3 [10.8 kB]
+Get:53 http://ftp.uk.debian.org/debian/ unstable/main libxrender1 armel 1:0.9.8-1 [32.8 kB]
+Get:54 http://ftp.uk.debian.org/debian/ unstable/main libcairo2 armel 1.12.14-5 [991 kB]
+Get:55 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armel 2.36.3-3 [1915 kB]
+Get:56 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armel 0.6.8-2 [121 kB]
+Get:57 http://ftp.uk.debian.org/debian/ unstable/main libdatrie1 armel 0.2.6-2 [27.1 kB]
+Get:58 http://ftp.uk.debian.org/debian/ unstable/main libgfortran3 armel 4.8.1-8 [242 kB]
+Get:59 http://ftp.uk.debian.org/debian/ unstable/main libgraphite2-3 armel 1.2.3-1 [57.0 kB]
+Get:60 http://ftp.uk.debian.org/debian/ unstable/main libharfbuzz0a armel 0.9.19-1 [429 kB]
+Get:61 http://ftp.uk.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:62 http://ftp.uk.debian.org/debian/ unstable/main libice6 armel 2:1.0.8-2 [56.5 kB]
+Get:63 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8 armel 8d-1 [153 kB]
+Get:64 http://ftp.uk.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:65 http://ftp.uk.debian.org/debian/ unstable/main libthai0 armel 0.1.19-2 [40.5 kB]
+Get:66 http://ftp.uk.debian.org/debian/ unstable/main fontconfig armel 2.10.2-2 [376 kB]
+Get:67 http://ftp.uk.debian.org/debian/ unstable/main libpango-1.0-0 armel 1.32.5-5+b1 [250 kB]
+Get:68 http://ftp.uk.debian.org/debian/ unstable/main libpangoft2-1.0-0 armel 1.32.5-5+b1 [183 kB]
+Get:69 http://ftp.uk.debian.org/debian/ unstable/main libpangocairo-1.0-0 armel 1.32.5-5+b1 [174 kB]
+Get:70 http://ftp.uk.debian.org/debian/ unstable/main libpaper1 armel 1.1.24+nmu2 [22.8 kB]
+Get:71 http://ftp.uk.debian.org/debian/ unstable/main libpcrecpp0 armel 1:8.31-2 [126 kB]
+Get:72 http://ftp.uk.debian.org/debian/ unstable/main libsm6 armel 2:1.2.1-2 [32.5 kB]
+Get:73 http://ftp.uk.debian.org/debian/ unstable/main libjbig0 armel 2.0-2 [30.9 kB]
+Get:74 http://ftp.uk.debian.org/debian/ unstable/main libtiff5 armel 4.0.3-1 [231 kB]
+Get:75 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armel 0.9.3-5 [406 kB]
+Get:76 http://ftp.uk.debian.org/debian/ unstable/main libxft2 armel 2.3.1-1 [56.6 kB]
+Get:77 http://ftp.uk.debian.org/debian/ unstable/main libxss1 armel 1:1.2.2-1 [16.6 kB]
+Get:78 http://ftp.uk.debian.org/debian/ unstable/main libxt6 armel 1:1.1.3-1+deb7u1 [181 kB]
+Get:79 http://ftp.uk.debian.org/debian/ unstable/main file armel 1:5.14-2 [53.8 kB]
+Get:80 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armel 0.18.3-1 [146 kB]
+Get:81 http://ftp.uk.debian.org/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:82 http://ftp.uk.debian.org/debian/ unstable/main cpp armel 4:4.8.1-2 [16.9 kB]
+Get:83 http://ftp.uk.debian.org/debian/ unstable/main gettext armel 0.18.3-1 [1864 kB]
+Get:84 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:85 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:86 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:87 http://ftp.uk.debian.org/debian/ unstable/main gcc armel 4:4.8.1-2 [5014 B]
+Get:88 http://ftp.uk.debian.org/debian/ unstable/main libgfortran-4.8-dev armel 4.8.1-8 [324 kB]
+Get:89 http://ftp.uk.debian.org/debian/ unstable/main gfortran-4.8 armel 4.8.1-8 [5703 kB]
+Get:90 http://ftp.uk.debian.org/debian/ unstable/main gfortran armel 4:4.8.1-2 [1126 B]
+Get:91 http://ftp.uk.debian.org/debian/ unstable/main libblas3 armel 1.2.20110419-5 [273 kB]
+Get:92 http://ftp.uk.debian.org/debian/ unstable/main libblas-dev armel 1.2.20110419-5 [279 kB]
+Get:93 http://ftp.uk.debian.org/debian/ unstable/main libbz2-dev armel 1.0.6-4 [33.9 kB]
+Get:94 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8-dev armel 8d-1 [260 kB]
+Get:95 http://ftp.uk.debian.org/debian/ unstable/main liblapack3 armel 3.4.2+dfsg-1 [2223 kB]
+Get:96 http://ftp.uk.debian.org/debian/ unstable/main liblapack-dev armel 3.4.2+dfsg-1 [2567 kB]
+Get:97 http://ftp.uk.debian.org/debian/ unstable/main libtinfo-dev armel 5.9+20130608-1 [93.1 kB]
+Get:98 http://ftp.uk.debian.org/debian/ unstable/main libncurses5-dev armel 5.9+20130608-1 [207 kB]
+Get:99 http://ftp.uk.debian.org/debian/ unstable/main libpaper-utils armel 1.1.24+nmu2 [18.8 kB]
+Get:100 http://ftp.uk.debian.org/debian/ unstable/main libpcre3-dev armel 1:8.31-2 [350 kB]
+Get:101 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armel 1:1.2.8.dfsg-1 [214 kB]
+Get:102 http://ftp.uk.debian.org/debian/ unstable/main libpng12-dev armel 1.2.49-4 [261 kB]
+Get:103 http://ftp.uk.debian.org/debian/ unstable/main libreadline6-dev armel 6.2+dfsg-0.1 [167 kB]
+Get:104 http://ftp.uk.debian.org/debian/ unstable/main libreadline-dev armel 6.2+dfsg-0.1 [896 B]
+Get:105 http://ftp.uk.debian.org/debian/ unstable/main zip armel 3.0-7 [334 kB]
+Get:106 http://ftp.uk.debian.org/debian/ unstable/main unzip armel 6.0-9 [193 kB]
+Get:107 http://ftp.uk.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:108 http://ftp.uk.debian.org/debian/ unstable/main tcl8.5 armel 8.5.14-2 [1593 kB]
+Get:109 http://ftp.uk.debian.org/debian/ unstable/main tk8.5 armel 8.5.14-2 [1141 kB]
+Get:110 http://ftp.uk.debian.org/debian/ unstable/main r-base-core armel 3.0.1-6 [21.5 MB]
+Get:111 http://ftp.uk.debian.org/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
+debconf: delaying package configuration, since apt-utils is not installed
+Fetched 76.0 MB in 35s (2142 kB/s)
+(Reading database ... 10866 files and directories currently installed.)
+Preparing to replace libgomp1:armel 4.8.1-2 (using .../libgomp1_4.8.1-8_armel.deb) ...
+Unpacking replacement libgomp1:armel ...
+Preparing to replace gcc-4.8-base:armel 4.8.1-2 (using .../gcc-4.8-base_4.8.1-8_armel.deb) ...
+Unpacking replacement gcc-4.8-base:armel ...
+Setting up gcc-4.8-base:armel (4.8.1-8) ...
+(Reading database ... 10866 files and directories currently installed.)
+Preparing to replace libstdc++6:armel 4.8.1-2 (using .../libstdc++6_4.8.1-8_armel.deb) ...
+Unpacking replacement libstdc++6:armel ...
+Setting up libstdc++6:armel (4.8.1-8) ...
+Processing triggers for libc-bin ...
+(Reading database ... 10866 files and directories currently installed.)
+Preparing to replace libasan0:armel 4.8.1-2 (using .../libasan0_4.8.1-8_armel.deb) ...
+Unpacking replacement libasan0:armel ...
+Preparing to replace libatomic1:armel 4.8.1-2 (using .../libatomic1_4.8.1-8_armel.deb) ...
+Unpacking replacement libatomic1:armel ...
+Preparing to replace cpp-4.8 4.8.1-2 (using .../cpp-4.8_4.8.1-8_armel.deb) ...
+Unpacking replacement cpp-4.8 ...
+Preparing to replace libstdc++-4.8-dev:armel 4.8.1-2 (using .../libstdc++-4.8-dev_4.8.1-8_armel.deb) ...
+Unpacking replacement libstdc++-4.8-dev:armel ...
+Preparing to replace g++-4.8 4.8.1-2 (using .../g++-4.8_4.8.1-8_armel.deb) ...
+Unpacking replacement g++-4.8 ...
+Preparing to replace gcc-4.8 4.8.1-2 (using .../gcc-4.8_4.8.1-8_armel.deb) ...
+Unpacking replacement gcc-4.8 ...
+Preparing to replace libgcc-4.8-dev:armel 4.8.1-2 (using .../libgcc-4.8-dev_4.8.1-8_armel.deb) ...
+Unpacking replacement libgcc-4.8-dev:armel ...
+Preparing to replace libgcc1:armel 1:4.8.1-2 (using .../libgcc1_1%3a4.8.1-8_armel.deb) ...
+Unpacking replacement libgcc1:armel ...
+Setting up libgcc1:armel (1:4.8.1-8) ...
+Processing triggers for libc-bin ...
Selecting previously unselected package libpipeline1:armel.
-(Reading database ... 14695 files and directories currently installed.)
-Unpacking libpipeline1:armel (from .../libpipeline1_1.2.3-1_armel.deb) ...
+(Reading database ... 10851 files and directories currently installed.)
+Unpacking libpipeline1:armel (from .../libpipeline1_1.2.4-1_armel.deb) ...
+Selecting previously unselected package libudev0:armel.
+Unpacking libudev0:armel (from .../libudev0_175-7.2_armel.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_armel.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_armel.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_armel.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_armel.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_armel.deb) ...
Selecting previously unselected package libasprintf0c2:armel.
-Unpacking libasprintf0c2:armel (from .../libasprintf0c2_0.18.1.1-10_armel.deb) ...
+Unpacking libasprintf0c2:armel (from .../libasprintf0c2_0.18.3-1_armel.deb) ...
Selecting previously unselected package libmagic1:armel.
-Unpacking libmagic1:armel (from .../libmagic1_1%3a5.14-1_armel.deb) ...
+Unpacking libmagic1:armel (from .../libmagic1_1%3a5.14-2_armel.deb) ...
Selecting previously unselected package libxml2:armel.
-Unpacking libxml2:armel (from .../libxml2_2.8.0+dfsg1-7+nmu1_armel.deb) ...
+Unpacking libxml2:armel (from .../libxml2_2.9.1+dfsg1-2_armel.deb) ...
+Selecting previously unselected package libdrm2:armel.
+Unpacking libdrm2:armel (from .../libdrm2_2.4.45-3_armel.deb) ...
+Selecting previously unselected package libglapi-mesa:armel.
+Unpacking libglapi-mesa:armel (from .../libglapi-mesa_9.1.4-1_armel.deb) ...
+Selecting previously unselected package libxau6:armel.
+Unpacking libxau6:armel (from .../libxau6_1%3a1.0.8-1_armel.deb) ...
+Selecting previously unselected package libxdmcp6:armel.
+Unpacking libxdmcp6:armel (from .../libxdmcp6_1%3a1.1.1-1_armel.deb) ...
+Selecting previously unselected package libxcb1:armel.
+Unpacking libxcb1:armel (from .../libxcb1_1.9.1-3_armel.deb) ...
+Selecting previously unselected package libxcb-dri2-0:armel.
+Unpacking libxcb-dri2-0:armel (from .../libxcb-dri2-0_1.9.1-3_armel.deb) ...
+Selecting previously unselected package libgbm1:armel.
+Unpacking libgbm1:armel (from .../libgbm1_9.1.4-1_armel.deb) ...
+Selecting previously unselected package libffi6:armel.
+Unpacking libffi6:armel (from .../libffi6_3.0.13-4_armel.deb) ...
+Selecting previously unselected package libwayland-client0:armel.
+Unpacking libwayland-client0:armel (from .../libwayland-client0_1.1.0-2_armel.deb) ...
+Selecting previously unselected package libwayland-server0:armel.
+Unpacking libwayland-server0:armel (from .../libwayland-server0_1.1.0-2_armel.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:armel.
+Unpacking libx11-6:armel (from .../libx11-6_2%3a1.6.0-1_armel.deb) ...
+Selecting previously unselected package libx11-xcb1:armel.
+Unpacking libx11-xcb1:armel (from .../libx11-xcb1_2%3a1.6.0-1_armel.deb) ...
+Selecting previously unselected package libxcb-render0:armel.
+Unpacking libxcb-render0:armel (from .../libxcb-render0_1.9.1-3_armel.deb) ...
+Selecting previously unselected package libxcb-shape0:armel.
+Unpacking libxcb-shape0:armel (from .../libxcb-shape0_1.9.1-3_armel.deb) ...
+Selecting previously unselected package libxcb-xfixes0:armel.
+Unpacking libxcb-xfixes0:armel (from .../libxcb-xfixes0_1.9.1-3_armel.deb) ...
+Selecting previously unselected package libegl1-mesa:armel.
+Unpacking libegl1-mesa:armel (from .../libegl1-mesa_9.1.4-1_armel.deb) ...
Selecting previously unselected package libexpat1:armel.
-Unpacking libexpat1:armel (from .../libexpat1_2.1.0-3_armel.deb) ...
+Unpacking libexpat1:armel (from .../libexpat1_2.1.0-4_armel.deb) ...
Selecting previously unselected package libfreetype6:armel.
Unpacking libfreetype6:armel (from .../libfreetype6_2.4.9-1.1_armel.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:armel.
-Unpacking libfontconfig1:armel (from .../libfontconfig1_2.9.0-7.1_armel.deb) ...
+Unpacking libfontconfig1:armel (from .../libfontconfig1_2.10.2-2_armel.deb) ...
+Selecting previously unselected package libxcb-glx0:armel.
+Unpacking libxcb-glx0:armel (from .../libxcb-glx0_1.9.1-3_armel.deb) ...
+Selecting previously unselected package libxfixes3:armel.
+Unpacking libxfixes3:armel (from .../libxfixes3_1%3a5.0.1-1_armel.deb) ...
+Selecting previously unselected package libxdamage1:armel.
+Unpacking libxdamage1:armel (from .../libxdamage1_1%3a1.1.4-1_armel.deb) ...
+Selecting previously unselected package libxext6:armel.
+Unpacking libxext6:armel (from .../libxext6_2%3a1.3.2-1_armel.deb) ...
+Selecting previously unselected package libxxf86vm1:armel.
+Unpacking libxxf86vm1:armel (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_armel.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:armel.
+Unpacking libgl1-mesa-glx:armel (from .../libgl1-mesa-glx_9.1.4-1_armel.deb) ...
Selecting previously unselected package libpixman-1-0:armel.
-Unpacking libpixman-1-0:armel (from .../libpixman-1-0_0.26.0-4_armel.deb) ...
-Selecting previously unselected package libxau6:armel.
-Unpacking libxau6:armel (from .../libxau6_1%3a1.0.7-1_armel.deb) ...
-Selecting previously unselected package libxdmcp6:armel.
-Unpacking libxdmcp6:armel (from .../libxdmcp6_1%3a1.1.1-1_armel.deb) ...
-Selecting previously unselected package libxcb1:armel.
-Unpacking libxcb1:armel (from .../libxcb1_1.8.1-2_armel.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:armel.
-Unpacking libx11-6:armel (from .../libx11-6_2%3a1.5.0-1_armel.deb) ...
-Selecting previously unselected package libxcb-render0:armel.
-Unpacking libxcb-render0:armel (from .../libxcb-render0_1.8.1-2_armel.deb) ...
+Unpacking libpixman-1-0:armel (from .../libpixman-1-0_0.30.0-3_armel.deb) ...
+Selecting previously unselected package libpng12-0:armel.
+Unpacking libpng12-0:armel (from .../libpng12-0_1.2.49-4_armel.deb) ...
Selecting previously unselected package libxcb-shm0:armel.
-Unpacking libxcb-shm0:armel (from .../libxcb-shm0_1.8.1-2_armel.deb) ...
-Selecting previously unselected package libxext6:armel.
-Unpacking libxext6:armel (from .../libxext6_2%3a1.3.1-2_armel.deb) ...
+Unpacking libxcb-shm0:armel (from .../libxcb-shm0_1.9.1-3_armel.deb) ...
Selecting previously unselected package libxrender1:armel.
-Unpacking libxrender1:armel (from .../libxrender1_1%3a0.9.7-1_armel.deb) ...
+Unpacking libxrender1:armel (from .../libxrender1_1%3a0.9.8-1_armel.deb) ...
Selecting previously unselected package libcairo2:armel.
-Unpacking libcairo2:armel (from .../libcairo2_1.12.14-4_armel.deb) ...
-Selecting previously unselected package libffi6:armel.
-Unpacking libffi6:armel (from .../libffi6_3.0.13-4_armel.deb) ...
+Unpacking libcairo2:armel (from .../libcairo2_1.12.14-5_armel.deb) ...
Selecting previously unselected package libglib2.0-0:armel.
-Unpacking libglib2.0-0:armel (from .../libglib2.0-0_2.36.1-2build1_armel.deb) ...
+Unpacking libglib2.0-0:armel (from .../libglib2.0-0_2.36.3-3_armel.deb) ...
Selecting previously unselected package libcroco3:armel.
Unpacking libcroco3:armel (from .../libcroco3_0.6.8-2_armel.deb) ...
Selecting previously unselected package libdatrie1:armel.
Unpacking libdatrie1:armel (from .../libdatrie1_0.2.6-2_armel.deb) ...
-Selecting previously unselected package libunistring0:armel.
-Unpacking libunistring0:armel (from .../libunistring0_0.9.3-5_armel.deb) ...
-Selecting previously unselected package libgettextpo0:armel.
-Unpacking libgettextpo0:armel (from .../libgettextpo0_0.18.1.1-10_armel.deb) ...
Selecting previously unselected package libgfortran3:armel.
-Unpacking libgfortran3:armel (from .../libgfortran3_4.8.0-7_armel.deb) ...
+Unpacking libgfortran3:armel (from .../libgfortran3_4.8.1-8_armel.deb) ...
+Selecting previously unselected package libgraphite2-3:armel.
+Unpacking libgraphite2-3:armel (from .../libgraphite2-3_1.2.3-1_armel.deb) ...
+Selecting previously unselected package libharfbuzz0a:armel.
+Unpacking libharfbuzz0a:armel (from .../libharfbuzz0a_0.9.19-1_armel.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:armel.
@@ -290,12 +453,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:armel.
Unpacking libthai0:armel (from .../libthai0_0.1.19-2_armel.deb) ...
-Selecting previously unselected package libxft2:armel.
-Unpacking libxft2:armel (from .../libxft2_2.3.1-1_armel.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_armel.deb) ...
-Selecting previously unselected package libpango1.0-0:armel.
-Unpacking libpango1.0-0:armel (from .../libpango1.0-0_1.30.0-1_armel.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_armel.deb) ...
+Selecting previously unselected package libpango-1.0-0:armel.
+Unpacking libpango-1.0-0:armel (from .../libpango-1.0-0_1.32.5-5+b1_armel.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:armel.
+Unpacking libpangoft2-1.0-0:armel (from .../libpangoft2-1.0-0_1.32.5-5+b1_armel.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:armel.
+Unpacking libpangocairo-1.0-0:armel (from .../libpangocairo-1.0-0_1.32.5-5+b1_armel.deb) ...
Selecting previously unselected package libpaper1:armel.
Unpacking libpaper1:armel (from .../libpaper1_1.1.24+nmu2_armel.deb) ...
Selecting previously unselected package libpcrecpp0:armel.
@@ -305,35 +470,40 @@ Unpacking libsm6:armel (from .../libsm6_2%3a1.2.1-2_armel.deb) ...
Selecting previously unselected package libjbig0:armel.
Unpacking libjbig0:armel (from .../libjbig0_2.0-2_armel.deb) ...
Selecting previously unselected package libtiff5:armel.
-Unpacking libtiff5:armel (from .../libtiff5_4.0.2-6_armel.deb) ...
+Unpacking libtiff5:armel (from .../libtiff5_4.0.3-1_armel.deb) ...
+Selecting previously unselected package libunistring0:armel.
+Unpacking libunistring0:armel (from .../libunistring0_0.9.3-5_armel.deb) ...
+Selecting previously unselected package libxft2:armel.
+Unpacking libxft2:armel (from .../libxft2_2.3.1-1_armel.deb) ...
Selecting previously unselected package libxss1:armel.
Unpacking libxss1:armel (from .../libxss1_1%3a1.2.2-1_armel.deb) ...
Selecting previously unselected package libxt6:armel.
-Unpacking libxt6:armel (from .../libxt6_1%3a1.1.3-1_armel.deb) ...
+Unpacking libxt6:armel (from .../libxt6_1%3a1.1.3-1+deb7u1_armel.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_armel.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_armel.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_armel.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_armel.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_armel.deb) ...
-Selecting previously unselected package libasprintf-dev:armel.
-Unpacking libasprintf-dev:armel (from .../libasprintf-dev_0.18.1.1-10_armel.deb) ...
-Selecting previously unselected package libgettextpo-dev:armel.
-Unpacking libgettextpo-dev:armel (from .../libgettextpo-dev_0.18.1.1-10_armel.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
+Preparing to replace cpp 4:4.8.1-1 (using .../cpp_4%3a4.8.1-2_armel.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_armel.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_armel.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
-Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_armel.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Preparing to replace gcc 4:4.8.1-1 (using .../gcc_4%3a4.8.1-2_armel.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
+Selecting previously unselected package libgfortran-4.8-dev:armel.
+Unpacking libgfortran-4.8-dev:armel (from .../libgfortran-4.8-dev_4.8.1-8_armel.deb) ...
+Selecting previously unselected package gfortran-4.8.
+Unpacking gfortran-4.8 (from .../gfortran-4.8_4.8.1-8_armel.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_armel.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.8.1-2_armel.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_armel.deb) ...
Selecting previously unselected package libblas-dev.
@@ -347,9 +517,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_armel.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_armel.deb) ...
Selecting previously unselected package libtinfo-dev:armel.
-Unpacking libtinfo-dev:armel (from .../libtinfo-dev_5.9+20130504-1_armel.deb) ...
+Unpacking libtinfo-dev:armel (from .../libtinfo-dev_5.9+20130608-1_armel.deb) ...
Selecting previously unselected package libncurses5-dev:armel.
-Unpacking libncurses5-dev:armel (from .../libncurses5-dev_5.9+20130504-1_armel.deb) ...
+Unpacking libncurses5-dev:armel (from .../libncurses5-dev_5.9+20130608-1_armel.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_armel.deb) ...
Selecting previously unselected package libpcre3-dev:armel.
@@ -369,48 +539,76 @@ Unpacking unzip (from .../archives/unzip_6.0-9_armel.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_armel.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_armel.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_armel.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_armel.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1-1_armel.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_armel.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1~20130512-1_all.deb) ...
-Processing triggers for mime-support ...
-Processing triggers for install-info ...
-Setting up libpipeline1:armel (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
-Setting up man-db (2.6.3-6) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:armel (4.8.1-8) ...
+Setting up libasan0:armel (4.8.1-8) ...
+Setting up libatomic1:armel (4.8.1-8) ...
+Setting up cpp-4.8 (4.8.1-8) ...
+Setting up libgcc-4.8-dev:armel (4.8.1-8) ...
+Setting up libstdc++-4.8-dev:armel (4.8.1-8) ...
+Setting up gcc-4.8 (4.8.1-8) ...
+Setting up g++-4.8 (4.8.1-8) ...
+Setting up libpipeline1:armel (1.2.4-1) ...
+Setting up libudev0:armel (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
+Setting up bsdmainutils (9.0.5) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:armel (0.18.1.1-10) ...
-Setting up libmagic1:armel (1:5.14-1) ...
-Setting up libxml2:armel (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:armel (2.1.0-3) ...
+Setting up libasprintf0c2:armel (0.18.3-1) ...
+Setting up libmagic1:armel (1:5.14-2) ...
+Setting up libxml2:armel (2.9.1+dfsg1-2) ...
+Setting up libdrm2:armel (2.4.45-3) ...
+Setting up libglapi-mesa:armel (9.1.4-1) ...
+Setting up libxau6:armel (1:1.0.8-1) ...
+Setting up libxdmcp6:armel (1:1.1.1-1) ...
+Setting up libxcb1:armel (1.9.1-3) ...
+Setting up libxcb-dri2-0:armel (1.9.1-3) ...
+Setting up libgbm1:armel (9.1.4-1) ...
+Setting up libffi6:armel (3.0.13-4) ...
+Setting up libwayland-client0:armel (1.1.0-2) ...
+Setting up libwayland-server0:armel (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:armel (2:1.6.0-1) ...
+Setting up libx11-xcb1:armel (2:1.6.0-1) ...
+Setting up libxcb-render0:armel (1.9.1-3) ...
+Setting up libxcb-shape0:armel (1.9.1-3) ...
+Setting up libxcb-xfixes0:armel (1.9.1-3) ...
+Setting up libegl1-mesa:armel (9.1.4-1) ...
+Setting up libexpat1:armel (2.1.0-4) ...
Setting up libfreetype6:armel (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:armel (2.9.0-7.1) ...
-Setting up libpixman-1-0:armel (0.26.0-4) ...
-Setting up libxau6:armel (1:1.0.7-1) ...
-Setting up libxdmcp6:armel (1:1.1.1-1) ...
-Setting up libxcb1:armel (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:armel (2:1.5.0-1) ...
-Setting up libxcb-render0:armel (1.8.1-2) ...
-Setting up libxcb-shm0:armel (1.8.1-2) ...
-Setting up libxext6:armel (2:1.3.1-2) ...
-Setting up libxrender1:armel (1:0.9.7-1) ...
-Setting up libcairo2:armel (1.12.14-4) ...
-Setting up libffi6:armel (3.0.13-4) ...
-Setting up libglib2.0-0:armel (2.36.1-2build1) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:armel (2.10.2-2) ...
+Setting up libxcb-glx0:armel (1.9.1-3) ...
+Setting up libxfixes3:armel (1:5.0.1-1) ...
+Setting up libxdamage1:armel (1:1.1.4-1) ...
+Setting up libxext6:armel (2:1.3.2-1) ...
+Setting up libxxf86vm1:armel (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:armel (9.1.4-1) ...
+Setting up libpixman-1-0:armel (0.30.0-3) ...
+Setting up libpng12-0:armel (1.2.49-4) ...
+Setting up libxcb-shm0:armel (1.9.1-3) ...
+Setting up libxrender1:armel (1:0.9.8-1) ...
+Setting up libcairo2:armel (1.12.14-5) ...
+Setting up libglib2.0-0:armel (2.36.3-3) ...
No schema files found: doing nothing.
Setting up libcroco3:armel (0.6.8-2) ...
Setting up libdatrie1:armel (0.2.6-2) ...
-Setting up libunistring0:armel (0.9.3-5) ...
-Setting up libgettextpo0:armel (0.18.1.1-10) ...
-Setting up libgfortran3:armel (4.8.0-7) ...
+Setting up libgfortran3:armel (4.8.1-8) ...
+Setting up libgraphite2-3:armel (1.2.3-1) ...
+Setting up libharfbuzz0a:armel (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
@@ -418,31 +616,34 @@ Setting up libice6:armel (2:1.0.8-2) ...
Setting up libjpeg8:armel (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:armel (0.1.19-2) ...
-Setting up libxft2:armel (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:armel (1.30.0-1) ...
+Setting up libpango-1.0-0:armel (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:armel (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:armel (1.32.5-5+b1) ...
Setting up libpaper1:armel (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:armel (1:8.31-2) ...
Setting up libsm6:armel (2:1.2.1-2) ...
Setting up libjbig0:armel (2.0-2) ...
-Setting up libtiff5:armel (4.0.2-6) ...
+Setting up libtiff5:armel (4.0.3-1) ...
+Setting up libunistring0:armel (0.9.3-5) ...
+Setting up libxft2:armel (2.3.1-1) ...
Setting up libxss1:armel (1:1.2.2-1) ...
-Setting up libxt6:armel (1:1.1.3-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libasprintf-dev:armel (0.18.1.1-10) ...
-Setting up libgettextpo-dev:armel (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:armel (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up cpp (4:4.8.1-2) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up gcc (4:4.8.1-2) ...
+Setting up libgfortran-4.8-dev:armel (4.8.1-8) ...
+Setting up gfortran-4.8 (4.8.1-8) ...
+Setting up gfortran (4:4.8.1-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -454,8 +655,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:armel (5.9+20130504-1) ...
-Setting up libncurses5-dev:armel (5.9+20130504-1) ...
+Setting up libtinfo-dev:armel (5.9+20130608-1) ...
+Setting up libncurses5-dev:armel (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:armel (1:8.31-2) ...
Setting up zlib1g-dev:armel (1:1.2.8.dfsg-1) ...
@@ -465,28 +666,24 @@ Setting up libreadline-dev:armel (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1~20130512-1) ...
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
Processing triggers for libc-bin ...
-ldconfig deferred processing now taking place
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- libbogl0 libnewt0.52 libprocps0 mime-support
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
-Checking correctness of dependencies...
-Kernel: Linux 2.6.32 armel (armv5tel)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6-dev_2.17-3 libstdc++6_4.8.0-7 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.8.12-1
-Package versions: apex-nslu2_1.6.10 apt_0.9.8 apt-utils_0.9.8 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 bc_1.06.95-6 bf-utf-source_0.06 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.4 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.13-3.3 cpio_2.11+dfsg-0.1 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 dctrl-tools_2.23 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debiandoc-sgml_1.2.27 debianutils_4.3.4 devio_1.2-1+b1 diffut [...]
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: Linux 3.2.0-4-mv78xx0 armel (armv5tel)
+Toolchain package versions: binutils_2.23.52.20130612-1 dpkg-dev_1.16.10 g++-4.8_4.8.1-8 gcc-4.8_4.8.1-8 libc6-dev_2.17-5 libstdc++-4.8-dev_4.8.1-8 libstdc++6_4.8.1-8 linux-libc-dev_3.8.13-1
+Package versions: apt_0.9.8.2 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130612-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.4 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.13-3.3 cpp_4:4.8.1-2 cpp-4.8_4.8.1-8 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.19-2 file_1:5.14-2 findutils_4. [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -496,28 +693,46 @@ Package versions: apex-nslu2_1.6.10 apt_0.9.8 apt-utils_0.9.8 base-files_7.2 bas
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-armel-sbuild
+SCHROOT_CHROOT_NAME=sid-armel-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-armel-sbuild-4120d77e-4c96-44cf-8c34-7184431c855d
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+TERM=linux
+USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture armel
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -533,7 +748,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -552,26 +767,28 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1~20130512-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
+ double abstol = -1e500; // infinity
+ ^
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -581,13 +798,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -595,7 +812,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -631,9 +848,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save
- gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -663,79 +880,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_armel.deb'.
- dpkg-genchanges -B -marmel Build Daemon (ancina) <buildd_armel-ancina at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_armel.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_armel.deb'.
+ dpkg-genchanges -B -marmel Build Daemon (arnold) <buildd_armel-arnold at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_armel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1514
+Build finished at 20130804-1010
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_armel.changes:
+─────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_armel.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: armel
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: armel Build Daemon (ancina) <buildd_armel-ancina at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: armel Build Daemon (arnold) <buildd_armel-arnold at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
- .
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- 49e089b392177b02aaf304ecd0db7d888bcb89a0 1618670 r-bioc-limma_3.16.3~dfsg-1_armel.deb
+ f77dd9d19e71249c8e2e0cf5178253d84e401d2e 866334 r-bioc-limma_3.16.7~dfsg-1_armel.deb
Checksums-Sha256:
- c325a36ddbefeb0bdc7a6540321683dc2117b47b84df2083ce79f9fdd3dbe180 1618670 r-bioc-limma_3.16.3~dfsg-1_armel.deb
+ 51c2fbd1c8e9565e518d9f642fedfb4b72262997ca650828d983c2974402f9c9 866334 r-bioc-limma_3.16.7~dfsg-1_armel.deb
Files:
- bd1eff1b5a15e5221a3a5e1dc5b529db 1618670 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_armel.deb
+ 3f4812ac2a9a8d4b0a1933fbee328082 866334 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_armel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_armel.deb
+r-bioc-limma_3.16.7~dfsg-1_armel.deb
────────────────────────────────────
new debian package, version 2.0.
- size 1618670 bytes: control archive= 1679 bytes.
- 782 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ size 866334 bytes: control archive=1631 bytes.
+ 773 bytes, 16 lines control
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: armel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1850
- Depends: libc6 (>= 2.4), r-base-core (>= 3.0.1~20130512-1)
+ Installed-Size: 1064
+ Depends: libc6 (>= 2.4), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -747,250 +961,91 @@ r-bioc-limma_3.16.3~dfsg-1_armel.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 15:13 ./
-drwxr-xr-x root/root 0 2013-05-17 15:13 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 15:13 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 15:13 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 15:13 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 15:13 ./usr/lib/R/site-library/limma/
-drwxr-xr-x root/root 0 2013-05-17 15:13 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 13840 2013-05-17 15:13 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2013-05-17 15:13 ./usr/lib/R/site-library/limma/R/
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--rw-r--r-- root/root 6703 2013-05-17 15:13 ./usr/lib/R/site-library/limma/help/AnIndex
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--rw-r--r-- root/root 10085 2013-05-17 15:13 ./usr/lib/R/site-library/limma/INDEX
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--rw-r--r-- root/root 11214 2013-05-17 15:13 ./usr/lib/R/site-library/limma/NEWS.Rd
--rw-r--r-- root/root 993 2013-05-17 15:13 ./usr/lib/R/site-library/limma/DESCRIPTION
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--rw-r--r-- root/root 1711 2013-05-17 15:13 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 45597 2013-05-17 15:13 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 806089 2013-05-17 15:13 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 102936 2013-05-17 15:13 ./usr/lib/R/site-library/limma/doc/changelog.txt
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--rw-r--r-- root/root 3089 2013-05-17 15:13 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 541 2013-05-17 15:13 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 5944 2013-05-17 15:13 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 6375 2013-05-17 15:13 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 1072 2013-05-17 15:13 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 2046 2013-05-17 15:13 ./usr/lib/R/site-library/limma/NAMESPACE
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--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
-drwxr-xr-x root/root 0 2013-05-17 15:13 ./usr/share/doc/r-bioc-limma/tests/
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+drwxr-xr-x root/root 0 2013-08-04 10:09 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 963 2013-08-04 10:09 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2013-08-04 10:09 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 13804 2013-08-04 10:09 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 993 2013-08-04 10:08 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 2095 2013-08-04 10:08 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2013-08-04 10:09 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 2577 2013-08-04 10:09 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 3431 2013-08-04 10:09 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 492607 2013-08-04 10:09 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 1393 2013-08-04 10:09 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 6742 2013-08-04 10:09 ./usr/lib/R/site-library/limma/help/AnIndex
+drwxr-xr-x root/root 0 2013-08-04 10:09 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 104280 2013-08-04 10:09 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 1711 2013-08-04 10:09 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 45597 2013-08-04 10:09 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 673 2013-08-04 10:09 ./usr/lib/R/site-library/limma/doc/index.html
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+-rw-r--r-- root/root 1056 2013-08-04 10:09 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 4133 2013-08-04 10:09 ./usr/lib/R/site-library/limma/R/limma.rdx
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+drwxr-xr-x root/root 0 2013-08-04 10:09 ./usr/lib/R/site-library/limma/html/
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+-rw-r--r-- root/root 1179 2013-08-04 10:09 ./usr/lib/R/site-library/limma/html/R.css
+drwxr-xr-x root/root 0 2013-08-04 10:09 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 219 2013-08-04 10:09 ./usr/lib/R/site-library/limma/Meta/vignette.rds
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+-rw-r--r-- root/root 1076 2013-08-04 10:08 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 542 2013-08-04 10:09 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 6386 2013-08-04 10:09 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 3098 2013-08-04 10:09 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 11214 2013-08-04 10:09 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 10085 2013-08-04 10:09 ./usr/lib/R/site-library/limma/INDEX
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+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+drwxr-xr-x root/root 0 2013-08-04 10:09 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-armel-sbuild-2a73574f-6d9a-47f2-b6e5-b0088b40bd14/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armel-EePZrW
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- libbogl0 libnewt0.52 libprocps0 mime-support
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 8 not upgraded.
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- libbogl0 libnewt0.52 libprocps0 mime-support
-Use 'apt-get autoremove' to remove them.
-The following packages will be REMOVED:
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- gettext* gettext-base* gfortran* gfortran-4.6* groff-base* html2text*
- intltool-debian* libasprintf-dev* libasprintf0c2* libblas-dev* libblas3*
- libbz2-dev* libcairo2* libcroco3* libdatrie1* libexpat1* libffi6*
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- libglib2.0-0* libice6* libjbig0* libjpeg8* libjpeg8-dev* liblapack-dev*
- liblapack3* libmagic1* libncurses5-dev* libpango1.0-0* libpaper-utils*
- libpaper1* libpcre3-dev* libpcrecpp0* libpipeline1* libpixman-1-0*
- libpng12-dev* libreadline-dev* libreadline6-dev* libsm6* libthai-data*
- libthai0* libtiff5* libtinfo-dev* libunistring0* libx11-6* libx11-data*
- libxau6* libxcb-render0* libxcb-shm0* libxcb1* libxdmcp6* libxext6* libxft2*
- libxml2* libxrender1* libxss1* libxt6* man-db* po-debconf* r-base-core*
- r-base-dev* tcl8.5* tk8.5* ttf-dejavu-core* ucf* unzip* x11-common*
- xdg-utils* zip* zlib1g-dev*
-0 upgraded, 0 newly installed, 79 to remove and 8 not upgraded.
-After this operation, 119 MB disk space will be freed.
-(Reading database ... 18600 files and directories currently installed.)
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-Removing cdbs ...
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-Removing libasprintf0c2:armel ...
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-Purging configuration files for libdatrie1:armel ...
-Removing libexpat1:armel ...
-Purging configuration files for libexpat1:armel ...
-Removing libglib2.0-0:armel ...
-Purging configuration files for libglib2.0-0:armel ...
-Removing libffi6:armel ...
-Purging configuration files for libffi6:armel ...
-Removing libfreetype6:armel ...
-Purging configuration files for libfreetype6:armel ...
-Removing libgettextpo-dev:armel ...
-Removing libgettextpo0:armel ...
-Removing libgfortran3:armel ...
-Purging configuration files for libgfortran3:armel ...
-Removing libxt6:armel ...
-Purging configuration files for libxt6:armel ...
-Removing libsm6:armel ...
-Purging configuration files for libsm6:armel ...
-Removing libice6:armel ...
-Purging configuration files for libice6:armel ...
-Removing libtiff5:armel ...
-Purging configuration files for libtiff5:armel ...
-Removing libjbig0:armel ...
-Purging configuration files for libjbig0:armel ...
-Removing libjpeg8-dev:armel ...
-Removing libjpeg8:armel ...
-Removing libmagic1:armel ...
-Purging configuration files for libmagic1:armel ...
-Removing libncurses5-dev:armel ...
-Removing libpaper-utils ...
-Removing libpaper1:armel ...
-Purging configuration files for libpaper1:armel ...
-Removing libpcre3-dev:armel ...
-Removing libpcrecpp0:armel ...
-Purging configuration files for libpcrecpp0:armel ...
-Removing libpipeline1:armel ...
-Purging configuration files for libpipeline1:armel ...
-Removing libpixman-1-0:armel ...
-Purging configuration files for libpixman-1-0:armel ...
-Removing libpng12-dev ...
-Removing libreadline-dev:armel ...
-Removing libreadline6-dev:armel ...
-Removing libthai-data ...
-Removing libtinfo-dev:armel ...
-Removing libunistring0:armel ...
-Purging configuration files for libunistring0:armel ...
-Removing libxss1:armel ...
-Purging configuration files for libxss1:armel ...
-Removing libxrender1:armel ...
-Purging configuration files for libxrender1:armel ...
-Removing libxext6:armel ...
-Purging configuration files for libxext6:armel ...
-Removing libx11-6:armel ...
-Purging configuration files for libx11-6:armel ...
-Removing libx11-data ...
-Removing libxcb-shm0:armel ...
-Purging configuration files for libxcb-shm0:armel ...
-Removing libxcb-render0:armel ...
-Purging configuration files for libxcb-render0:armel ...
-Removing libxcb1:armel ...
-Purging configuration files for libxcb1:armel ...
-Removing libxau6:armel ...
-Purging configuration files for libxau6:armel ...
-Removing libxdmcp6:armel ...
-Purging configuration files for libxdmcp6:armel ...
-Removing libxml2:armel ...
-Purging configuration files for libxml2:armel ...
-Removing tcl8.5 ...
-Purging configuration files for tcl8.5 ...
-Removing ucf ...
-Purging configuration files for ucf ...
-Removing unzip ...
-Purging configuration files for unzip ...
-Removing x11-common ...
-All runlevel operations denied by policy
-invoke-rc.d: policy-rc.d denied execution of stop.
-Purging configuration files for x11-common ...
-dpkg: warning: while removing x11-common, directory '/etc/X11' not empty so not removed
-Removing xdg-utils ...
-Removing zip ...
-Removing zlib1g-dev:armel ...
-Processing triggers for mime-support ...
-Processing triggers for libc-bin ...
-ldconfig deferred processing now taking place
-Processing triggers for install-info ...
+Purging /«BUILDDIR»
+Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: armel
-Build-Space: 5892
-Build-Time: 105
+Build Architecture: armel
+Build-Space: 3576
+Build-Time: 124
Distribution: sid
-Install-Time: 78
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: armel
+Install-Time: 481
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: armel
Package: r-bioc-limma
-Package-Time: 231
-Source-Version: 3.16.3~dfsg-1
-Space: 5892
+Package-Time: 801
+Source-Version: 3.16.7~dfsg-1
+Space: 3576
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1514
-Build needed 00:03:51, 5892k disc space
-Signature with key '06BDA360' requested:
+Finished at 20130804-1010
+Build needed 00:13:21, 3576k disc space
+Signature with key 'CF1DCD8E' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_armel.changes CF1DCD8E
+
+Successfully signed changes file
diff --git a/armhf.log b/armhf.log
index f0cc1df..ca9cdad 100644
--- a/armhf.log
+++ b/armhf.log
@@ -1,64 +1,75 @@
-From buildd at hasse.debian.org Thu May 16 15:44:56 2013
-Return-path: <buildd at hasse.debian.org>
+From buildd at hummel.debian.org Sun Aug 04 10:42:28 2013
+Return-path: <buildd at hummel.debian.org>
Received: from muffat.debian.org ([206.12.19.146])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
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by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
- (Exim 4.72) (envelope-from <buildd at hasse.debian.org>)
- id 1Ud0MR-0004aT-0c
- for logs at buildd.debian.org; Thu, 16 May 2013 15:44:55 +0000
-Received: from [217.140.96.68] (helo=hasse.debian.org)
+ (Exim 4.72) (envelope-from <buildd at hummel.debian.org>)
+ id 1V5vlc-0001B2-Aj
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:42:28 +0000
+Received: from hummel.ynic.york.ac.uk ([144.32.168.76] helo=hummel.debian.org)
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- CN=hasse.debian.org, EMAIL=hostmaster at hasse.debian.org (verified)
+ CN=hummel.debian.org, EMAIL=hostmaster at hummel.debian.org (verified)
by muffat.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
- (Exim 4.80) (envelope-from <buildd at hasse.debian.org>)
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-From: buildd on hasse <buildd at hasse.debian.org>
-To: logs at buildd.debian.org,buildd-porters at hasse.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on armhf
+ (Exim 4.80) (envelope-from <buildd at hummel.debian.org>)
+ id 1V5vlZ-0004d7-Hg
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:42:25 +0000
+Received: from buildd by hummel.debian.org with local (Exim 4.80)
+ (envelope-from <buildd at hummel.debian.org>)
+ id 1V5vlU-00021K-5y; Sun, 04 Aug 2013 10:42:20 +0000
+Content-Transfer-Encoding: binary
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 10:42:19 +0000
+From: buildd on hummel <buildd at hummel.debian.org>
+To: logs at buildd.debian.org,buildd-porters at hummel.debian.org
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on armhf
(dist=sid)
-Content-Type: text/plain; charset=UTF-8
-Content-Transfer-Encoding: 8bit
-Message-Id: <E1Ud0MH-0006Ts-5P at hasse.debian.org>
-Date: Thu, 16 May 2013 15:44:45 +0000
+Key-Id: 90FF37DC
+Message-Id: <E1V5vlU-00021K-5y at hummel.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on hasse.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on hummel.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (armhf) 16 May 2013 15:37 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (armhf) 04 Aug 2013 10:30 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: armhf
-Get:1 http://ftp.uk.debian.org unstable Release.gpg [1571 B]
-Get:2 http://ftp.uk.debian.org unstable Release [203 kB]
-Get:3 http://incoming.debian.org unstable Release.gpg [1571 B]
-Get:4 http://incoming.debian.org buildd-unstable Release.gpg [1571 B]
-Get:5 http://ftp.uk.debian.org unstable/main Sources [6728 kB]
-Get:6 http://incoming.debian.org unstable Release [203 kB]
-Get:7 http://incoming.debian.org buildd-unstable Release [109 kB]
-Get:8 http://incoming.debian.org unstable/main Sources [6728 kB]
-Get:9 http://ftp.uk.debian.org unstable/contrib Sources [53.7 kB]
-Get:10 http://ftp.uk.debian.org unstable/non-free Sources [102 kB]
-Get:11 http://ftp.uk.debian.org unstable/main armhf Packages [6219 kB]
-Get:12 http://ftp.uk.debian.org unstable/contrib armhf Packages [36.2 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [102 kB]
-Get:15 http://incoming.debian.org unstable/main armhf Packages [6219 kB]
-Get:16 http://incoming.debian.org unstable/contrib armhf Packages [36.2 kB]
-Get:17 http://incoming.debian.org buildd-unstable/main Sources [119 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib Sources [2481 B]
-Get:19 http://incoming.debian.org buildd-unstable/non-free Sources [2167 B]
-Get:20 http://incoming.debian.org buildd-unstable/main armhf Packages [73.4 kB]
-Get:21 http://incoming.debian.org buildd-unstable/contrib armhf Packages [1481 B]
-Fetched 27.0 MB in 1min 28s (304 kB/s)
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: armhf
+Host Architecture: armhf
+Build Architecture: armhf
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-ngUyvl/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-ngUyvl' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-armhf-sbuild-594eca8e-1203-4682-b4b9-927e11e742da' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://incoming.debian.org unstable InRelease [204 kB]
+Get:2 http://ftp.uk.debian.org unstable InRelease [204 kB]
+Get:3 http://ftp.uk.debian.org unstable/main Sources [6890 kB]
+Get:4 http://incoming.debian.org buildd-unstable InRelease [111 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:6 http://ftp.uk.debian.org unstable/contrib Sources [55.4 kB]
+Get:7 http://ftp.uk.debian.org unstable/non-free Sources [105 kB]
+Get:8 http://ftp.uk.debian.org unstable/main armhf Packages [6290 kB]
+Get:9 http://ftp.uk.debian.org unstable/contrib armhf Packages [37.1 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:12 http://incoming.debian.org unstable/main armhf Packages [6290 kB]
+Get:13 http://incoming.debian.org unstable/contrib armhf Packages [37.1 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [101 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2795 B]
+Get:17 http://incoming.debian.org buildd-unstable/main armhf Packages [76.0 kB]
+Get:18 http://incoming.debian.org buildd-unstable/contrib armhf Packages [998 B]
+Fetched 27.5 MB in 1min 31s (301 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -78,340 +89,363 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 2s (410 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (196 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-RHUWAq/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: already installed (1.18.4-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 37 not upgraded.
-Removing negative dependencies:
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 53 not upgraded.
+Need to get 0 B/710 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 11017 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-nC1pg4/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 37 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.1)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-1)
-bsdutils: already installed (1:2.20.1-5.3)
-coreutils: already installed (8.20-3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.13-38)
-login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.3)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-21)
-sed: already installed (4.2.1-10)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-5)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (2.13-38)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130509
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libmpc2
-Use 'apt-get autoremove' to remove it.
The following extra packages will be installed:
- bsdmainutils cpp-4.6 file fontconfig fontconfig-config fonts-dejavu-core
- g++-4.6 gcc-4.6 gcc-4.6-base gcc-4.8-base gettext gettext-base gfortran
- gfortran-4.6 groff-base html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6 libc6-dev
- libcairo2 libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1 libfreetype6
- libgettextpo-dev libgettextpo0 libgfortran3 libglib2.0-0 libice6 libjbig0
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5
- libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
- libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libstdc++6-4.6-dev libthai-data
- libthai0 libtiff5 libtinfo-dev libtinfo5 libunistring0 libx11-6 libx11-data
- libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
- libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf r-base-core
- tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g
- zlib1g-dev
+ bsdmainutils cdbs cpp cpp-4.8 debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core g++-4.8 gcc gcc-4.8 gcc-4.8-base gettext gettext-base
+ gfortran gfortran-4.8 groff-base intltool-debian libasan0 libasprintf0c2
+ libatomic1 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1
+ libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1 libfreetype6 libgbm1
+ libgcc-4.8-dev libgcc1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0a libice6
+ libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libllvm3.2 libmagic1
+ libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
+ libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6
+ libstdc++-4.8-dev libstdc++6 libthai-data libthai0 libtiff5 libtinfo-dev
+ libudev0 libunistring0 libwayland-client0 libwayland-server0 libx11-6
+ libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0 libxcb-render0
+ libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6
+ libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6 libxxf86vm1
+ man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make
- gcc-4.6-doc libstdc++6-4.6-dbg libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg
- libquadmath-dbg libmudflap0-dbg libcloog-ppl0 libppl-c2 libppl7
- binutils-gold gettext-doc gfortran-doc gfortran-4.6-doc libgfortran3-dbg
- groff glibc-doc ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
- ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp
- libstdc++6-4.6-doc less www-browser libmail-box-perl r-doc-info r-doc-pdf
- r-mathlib r-base-html texlive-base texlive-latex-base
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.8-locales dh-make
+ gcc-4.8-doc libstdc++6-4.8-dbg gcc-multilib manpages-dev autoconf
+ automake1.9 libtool flex bison gdb gcc-doc libmudflap0-4.8-dev libgcc1-dbg
+ libgomp1-dbg libitm1-dbg libatomic1-dbg libasan0-dbg libtsan0-dbg
+ libbacktrace1-dbg libquadmath-dbg libmudflap0-dbg gettext-doc gfortran-doc
+ gfortran-4.8-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
+ ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
+ ttf-arphic-bkai00mp libstdc++-4.8-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- libgpm2 xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
- fonts-dejavu-core gcc-4.8-base gettext gettext-base gfortran gfortran-4.6
- groff-base html2text intltool-debian libasprintf-dev libasprintf0c2
- libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi6 libfontconfig1 libfreetype6 libgettextpo-dev libgettextpo0
- libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
- zlib1g-dev
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0
+ libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libllvm3.2 libmagic1
+ libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
+ libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data
+ libthai0 libtiff5 libtinfo-dev libudev0 libunistring0 libwayland-client0
+ libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0
+ libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1
+ libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1
+ libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-dev-bin libc6 libc6-dev
- libncurses5 libstdc++6-4.6-dev libtinfo5 ncurses-bin zlib1g
-12 upgraded, 84 newly installed, 0 to remove and 25 not upgraded.
-Need to get 76.4 MB of archives.
-After this operation, 103 MB of additional disk space will be used.
-Get:1 http://ftp.uk.debian.org/debian/ unstable/main libc6-dev armhf 2.17-2 [2367 kB]
-Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-base-core armhf 3.0.1-1 [21.2 MB]
-Get:3 http://ftp.uk.debian.org/debian/ unstable/main libc-dev-bin armhf 2.17-2 [226 kB]
-Get:4 http://ftp.uk.debian.org/debian/ unstable/main libc6 armhf 2.17-2 [4020 kB]
-Get:5 http://ftp.uk.debian.org/debian/ unstable/main libtinfo5 armhf 5.9+20130504-1 [279 kB]
-Get:6 http://ftp.uk.debian.org/debian/ unstable/main libncurses5 armhf 5.9+20130504-1 [88.6 kB]
-Get:7 http://ftp.uk.debian.org/debian/ unstable/main ncurses-bin armhf 5.9+20130504-1 [353 kB]
-Get:8 http://ftp.uk.debian.org/debian/ unstable/main zlib1g armhf 1:1.2.8.dfsg-1 [85.3 kB]
-Get:9 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 armhf 1.2.3-1 [34.2 kB]
-Get:10 http://ftp.uk.debian.org/debian/ unstable/main groff-base armhf 1.22.2-2 [679 kB]
-Get:11 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armhf 9.0.5 [204 kB]
-Get:12 http://ftp.uk.debian.org/debian/ unstable/main man-db armhf 2.6.3-6 [869 kB]
-Get:13 http://ftp.uk.debian.org/debian/ unstable/main libasprintf0c2 armhf 0.18.1.1-10 [26.8 kB]
-Get:14 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armhf 1:5.14-1 [213 kB]
-Get:15 http://ftp.uk.debian.org/debian/ unstable/main libpcre3 armhf 1:8.31-2 [246 kB]
-Get:16 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armhf 2.8.0+dfsg1-7+nmu1 [785 kB]
-Get:17 http://ftp.uk.debian.org/debian/ unstable/main libexpat1 armhf 2.1.0-3 [109 kB]
-Get:18 http://ftp.uk.debian.org/debian/ unstable/main libfreetype6 armhf 2.4.9-1.1 [380 kB]
-Get:19 http://ftp.uk.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:20 http://ftp.uk.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:21 http://ftp.uk.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:22 http://ftp.uk.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:23 http://ftp.uk.debian.org/debian/ unstable/main libfontconfig1 armhf 2.9.0-7.1 [280 kB]
-Get:24 http://ftp.uk.debian.org/debian/ unstable/main libpixman-1-0 armhf 0.26.0-4 [405 kB]
-Get:25 http://ftp.uk.debian.org/debian/ unstable/main libpng12-0 armhf 1.2.49-4 [176 kB]
-Get:26 http://ftp.uk.debian.org/debian/ unstable/main libxau6 armhf 1:1.0.7-1 [17.3 kB]
-Get:27 http://ftp.uk.debian.org/debian/ unstable/main libxdmcp6 armhf 1:1.1.1-1 [25.0 kB]
-Get:28 http://ftp.uk.debian.org/debian/ unstable/main libxcb1 armhf 1.8.1-2 [41.6 kB]
-Get:29 http://ftp.uk.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:30 http://ftp.uk.debian.org/debian/ unstable/main libx11-6 armhf 2:1.5.0-1 [815 kB]
-Get:31 http://ftp.uk.debian.org/debian/ unstable/main libxcb-render0 armhf 1.8.1-2 [16.2 kB]
-Get:32 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shm0 armhf 1.8.1-2 [9842 B]
-Get:33 http://ftp.uk.debian.org/debian/ unstable/main libxext6 armhf 2:1.3.1-2 [47.6 kB]
-Get:34 http://ftp.uk.debian.org/debian/ unstable/main libxrender1 armhf 1:0.9.7-1 [28.1 kB]
-Get:35 http://ftp.uk.debian.org/debian/ unstable/main libcairo2 armhf 1.12.14-4 [906 kB]
-Get:36 http://ftp.uk.debian.org/debian/ unstable/main libffi6 armhf 3.0.13-4 [18.8 kB]
-Get:37 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armhf 2.36.1-2build1 [1917 kB]
-Get:38 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armhf 0.6.6-2 [120 kB]
-Get:39 http://ftp.uk.debian.org/debian/ unstable/main libdatrie1 armhf 0.2.6-2 [26.9 kB]
-Get:40 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armhf 0.9.3-5+b1 [404 kB]
-Get:41 http://ftp.uk.debian.org/debian/ unstable/main libgettextpo0 armhf 0.18.1.1-10 [123 kB]
-Get:42 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.8-base armhf 4.8.0-7 [148 kB]
-Get:43 http://ftp.uk.debian.org/debian/ unstable/main libgfortran3 armhf 4.8.0-7 [210 kB]
-Get:44 http://ftp.uk.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:45 http://ftp.uk.debian.org/debian/ unstable/main libice6 armhf 2:1.0.8-2 [53.4 kB]
-Get:46 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8 armhf 8d-1 [121 kB]
-Get:47 http://ftp.uk.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:48 http://ftp.uk.debian.org/debian/ unstable/main libthai0 armhf 0.1.19-2 [40.5 kB]
-Get:49 http://ftp.uk.debian.org/debian/ unstable/main libxft2 armhf 2.3.1-1 [53.3 kB]
-Get:50 http://ftp.uk.debian.org/debian/ unstable/main fontconfig armhf 2.9.0-7.1 [349 kB]
-Get:51 http://ftp.uk.debian.org/debian/ unstable/main libpango1.0-0 armhf 1.30.0-1 [398 kB]
-Get:52 http://ftp.uk.debian.org/debian/ unstable/main libpaper1 armhf 1.1.24+nmu2 [20.8 kB]
-Get:53 http://ftp.uk.debian.org/debian/ unstable/main libpcrecpp0 armhf 1:8.31-2 [125 kB]
-Get:54 http://ftp.uk.debian.org/debian/ unstable/main libsm6 armhf 2:1.2.1-2 [31.2 kB]
-Get:55 http://ftp.uk.debian.org/debian/ unstable/main libjbig0 armhf 2.0-2 [29.2 kB]
-Get:56 http://ftp.uk.debian.org/debian/ unstable/main libtiff5 armhf 4.0.2-6 [215 kB]
-Get:57 http://ftp.uk.debian.org/debian/ unstable/main libxss1 armhf 1:1.2.2-1 [16.3 kB]
-Get:58 http://ftp.uk.debian.org/debian/ unstable/main libxt6 armhf 1:1.1.3-1 [170 kB]
-Get:59 http://ftp.uk.debian.org/debian/ unstable/main libmpc3 armhf 1.0.1-1 [35.6 kB]
-Get:60 http://ftp.uk.debian.org/debian/ unstable/main file armhf 1:5.14-1 [53.8 kB]
-Get:61 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armhf 0.18.1.1-10 [129 kB]
-Get:62 http://ftp.uk.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:63 http://ftp.uk.debian.org/debian/ unstable/main libstdc++6-4.6-dev armhf 4.6.4-2 [1672 kB]
-Get:64 http://ftp.uk.debian.org/debian/ unstable/main g++-4.6 armhf 4.6.4-2 [4888 kB]
-Get:65 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.6 armhf 4.6.4-2 [4225 kB]
-Get:66 http://ftp.uk.debian.org/debian/ unstable/main cpp-4.6 armhf 4.6.4-2 [3993 kB]
-Get:67 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.6-base armhf 4.6.4-2 [143 kB]
-Get:68 http://ftp.uk.debian.org/debian/ unstable/main html2text armhf 1.3.2a-15+b1 [94.6 kB]
-Get:69 http://ftp.uk.debian.org/debian/ unstable/main libasprintf-dev armhf 0.18.1.1-10 [27.1 kB]
-Get:70 http://ftp.uk.debian.org/debian/ unstable/main libgettextpo-dev armhf 0.18.1.1-10 [143 kB]
-Get:71 http://ftp.uk.debian.org/debian/ unstable/main gettext armhf 0.18.1.1-10 [1706 kB]
-Get:72 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:73 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:74 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20130509 [707 kB]
-Get:75 http://ftp.uk.debian.org/debian/ unstable/main gfortran-4.6 armhf 4.6.4-2 [4539 kB]
-Get:76 http://ftp.uk.debian.org/debian/ unstable/main gfortran armhf 4:4.6.3-8 [1128 B]
-Get:77 http://ftp.uk.debian.org/debian/ unstable/main libblas3 armhf 1.2.20110419-5 [191 kB]
-Get:78 http://ftp.uk.debian.org/debian/ unstable/main libblas-dev armhf 1.2.20110419-5 [195 kB]
-Get:79 http://ftp.uk.debian.org/debian/ unstable/main libbz2-dev armhf 1.0.6-4 [32.7 kB]
-Get:80 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8-dev armhf 8d-1 [226 kB]
-Get:81 http://ftp.uk.debian.org/debian/ unstable/main liblapack3 armhf 3.4.2+dfsg-1 [3390 kB]
-Get:82 http://ftp.uk.debian.org/debian/ unstable/main liblapack-dev armhf 3.4.2+dfsg-1 [3661 kB]
-Get:83 http://ftp.uk.debian.org/debian/ unstable/main libtinfo-dev armhf 5.9+20130504-1 [86.6 kB]
-Get:84 http://ftp.uk.debian.org/debian/ unstable/main libncurses5-dev armhf 5.9+20130504-1 [194 kB]
-Get:85 http://ftp.uk.debian.org/debian/ unstable/main libpaper-utils armhf 1.1.24+nmu2 [17.8 kB]
-Get:86 http://ftp.uk.debian.org/debian/ unstable/main libpcre3-dev armhf 1:8.31-2 [348 kB]
-Get:87 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armhf 1:1.2.8.dfsg-1 [209 kB]
-Get:88 http://ftp.uk.debian.org/debian/ unstable/main libpng12-dev armhf 1.2.49-4 [256 kB]
-Get:89 http://ftp.uk.debian.org/debian/ unstable/main libreadline6-dev armhf 6.2+dfsg-0.1 [158 kB]
-Get:90 http://ftp.uk.debian.org/debian/ unstable/main libreadline-dev armhf 6.2+dfsg-0.1 [896 B]
-Get:91 http://ftp.uk.debian.org/debian/ unstable/main zip armhf 3.0-7 [319 kB]
-Get:92 http://ftp.uk.debian.org/debian/ unstable/main unzip armhf 6.0-9 [186 kB]
-Get:93 http://ftp.uk.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:94 http://ftp.uk.debian.org/debian/ unstable/main tcl8.5 armhf 8.5.11-2 [1538 kB]
-Get:95 http://ftp.uk.debian.org/debian/ unstable/main tk8.5 armhf 8.5.11-2 [1084 kB]
-Get:96 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-base-dev all 3.0.1-1 [3896 B]
+ cpp cpp-4.8 g++-4.8 gcc gcc-4.8 gcc-4.8-base libasan0 libatomic1
+ libgcc-4.8-dev libgcc1 libgomp1 libstdc++-4.8-dev libstdc++6
+13 upgraded, 100 newly installed, 0 to remove and 40 not upgraded.
+Need to get 82.4 MB/82.4 MB of archives.
+After this operation, 123 MB of additional disk space will be used.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main libgomp1 armhf 4.8.1-8 [24.9 kB]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.8-base armhf 4.8.1-8 [150 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main libstdc++6 armhf 4.8.1-8 [275 kB]
+Get:4 http://ftp.uk.debian.org/debian/ unstable/main libasan0 armhf 4.8.1-8 [67.1 kB]
+Get:5 http://ftp.uk.debian.org/debian/ unstable/main libatomic1 armhf 4.8.1-8 [6496 B]
+Get:6 http://ftp.uk.debian.org/debian/ unstable/main cpp-4.8 armhf 4.8.1-8 [4984 kB]
+Get:7 http://ftp.uk.debian.org/debian/ unstable/main libstdc++-4.8-dev armhf 4.8.1-8 [1782 kB]
+Get:8 http://ftp.uk.debian.org/debian/ unstable/main g++-4.8 armhf 4.8.1-8 [5384 kB]
+Get:9 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.8 armhf 4.8.1-8 [5450 kB]
+Get:10 http://ftp.uk.debian.org/debian/ unstable/main libgcc-4.8-dev armhf 4.8.1-8 [303 kB]
+Get:11 http://ftp.uk.debian.org/debian/ unstable/main libgcc1 armhf 1:4.8.1-8 [48.6 kB]
+Get:12 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 armhf 1.2.4-1 [35.3 kB]
+Get:13 http://ftp.uk.debian.org/debian/ unstable/main libudev0 armhf 175-7.2 [122 kB]
+Get:14 http://ftp.uk.debian.org/debian/ unstable/main groff-base armhf 1.22.2-3 [677 kB]
+Get:15 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils armhf 9.0.5 [204 kB]
+Get:16 http://ftp.uk.debian.org/debian/ unstable/main man-db armhf 2.6.5-2 [952 kB]
+Get:17 http://ftp.uk.debian.org/debian/ unstable/main libasprintf0c2 armhf 0.18.3-1 [29.5 kB]
+Get:18 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 armhf 1:5.14-2 [214 kB]
+Get:19 http://ftp.uk.debian.org/debian/ unstable/main libxml2 armhf 2.9.1+dfsg1-2 [795 kB]
+Get:20 http://ftp.uk.debian.org/debian/ unstable/main libdrm2 armhf 2.4.45-3 [463 kB]
+Get:21 http://ftp.uk.debian.org/debian/ unstable/main libffi6 armhf 3.0.13-4 [18.8 kB]
+Get:22 http://ftp.uk.debian.org/debian/ unstable/main libglapi-mesa armhf 9.1.4-1 [59.2 kB]
+Get:23 http://ftp.uk.debian.org/debian/ unstable/main libllvm3.2 armhf 1:3.2repack-10 [7059 kB]
+Get:24 http://ftp.uk.debian.org/debian/ unstable/main libxau6 armhf 1:1.0.8-1 [19.5 kB]
+Get:25 http://ftp.uk.debian.org/debian/ unstable/main libxdmcp6 armhf 1:1.1.1-1 [25.0 kB]
+Get:26 http://ftp.uk.debian.org/debian/ unstable/main libxcb1 armhf 1.9.1-3 [42.2 kB]
+Get:27 http://ftp.uk.debian.org/debian/ unstable/main libxcb-dri2-0 armhf 1.9.1-3 [12.3 kB]
+Get:28 http://ftp.uk.debian.org/debian/ unstable/main libgbm1 armhf 9.1.4-1 [381 kB]
+Get:29 http://ftp.uk.debian.org/debian/ unstable/main libwayland-client0 armhf 1.1.0-2 [18.1 kB]
+Get:30 http://ftp.uk.debian.org/debian/ unstable/main libwayland-server0 armhf 1.1.0-2 [25.0 kB]
+Get:31 http://ftp.uk.debian.org/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:32 http://ftp.uk.debian.org/debian/ unstable/main libx11-6 armhf 2:1.6.0-1 [833 kB]
+Get:33 http://ftp.uk.debian.org/debian/ unstable/main libx11-xcb1 armhf 2:1.6.0-1 [153 kB]
+Get:34 http://ftp.uk.debian.org/debian/ unstable/main libxcb-render0 armhf 1.9.1-3 [17.3 kB]
+Get:35 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shape0 armhf 1.9.1-3 [11.1 kB]
+Get:36 http://ftp.uk.debian.org/debian/ unstable/main libxcb-xfixes0 armhf 1.9.1-3 [14.0 kB]
+Get:37 http://ftp.uk.debian.org/debian/ unstable/main libegl1-mesa armhf 9.1.4-1 [74.9 kB]
+Get:38 http://ftp.uk.debian.org/debian/ unstable/main libexpat1 armhf 2.1.0-4 [110 kB]
+Get:39 http://ftp.uk.debian.org/debian/ unstable/main libfreetype6 armhf 2.4.9-1.1 [380 kB]
+Get:40 http://ftp.uk.debian.org/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:41 http://ftp.uk.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:42 http://ftp.uk.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:43 http://ftp.uk.debian.org/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:44 http://ftp.uk.debian.org/debian/ unstable/main libfontconfig1 armhf 2.10.2-2 [301 kB]
+Get:45 http://ftp.uk.debian.org/debian/ unstable/main libxcb-glx0 armhf 1.9.1-3 [27.8 kB]
+Get:46 http://ftp.uk.debian.org/debian/ unstable/main libxfixes3 armhf 1:5.0.1-1 [20.7 kB]
+Get:47 http://ftp.uk.debian.org/debian/ unstable/main libxdamage1 armhf 1:1.1.4-1 [14.5 kB]
+Get:48 http://ftp.uk.debian.org/debian/ unstable/main libxext6 armhf 2:1.3.2-1 [49.8 kB]
+Get:49 http://ftp.uk.debian.org/debian/ unstable/main libxxf86vm1 armhf 1:1.1.2-1+deb7u1 [17.7 kB]
+Get:50 http://ftp.uk.debian.org/debian/ unstable/main libgl1-mesa-glx armhf 9.1.4-1 [125 kB]
+Get:51 http://ftp.uk.debian.org/debian/ unstable/main libpixman-1-0 armhf 0.30.0-3 [447 kB]
+Get:52 http://ftp.uk.debian.org/debian/ unstable/main libpng12-0 armhf 1.2.49-4 [176 kB]
+Get:53 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shm0 armhf 1.9.1-3 [10.5 kB]
+Get:54 http://ftp.uk.debian.org/debian/ unstable/main libxrender1 armhf 1:0.9.8-1 [29.7 kB]
+Get:55 http://ftp.uk.debian.org/debian/ unstable/main libcairo2 armhf 1.12.14-5 [935 kB]
+Get:56 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 armhf 2.36.3-3 [1927 kB]
+Get:57 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 armhf 0.6.8-2 [121 kB]
+Get:58 http://ftp.uk.debian.org/debian/ unstable/main libdatrie1 armhf 0.2.6-2 [26.9 kB]
+Get:59 http://ftp.uk.debian.org/debian/ unstable/main libgfortran3 armhf 4.8.1-8 [207 kB]
+Get:60 http://ftp.uk.debian.org/debian/ unstable/main libgraphite2-3 armhf 1.2.3-1 [50.5 kB]
+Get:61 http://ftp.uk.debian.org/debian/ unstable/main libharfbuzz0a armhf 0.9.19-1 [419 kB]
+Get:62 http://ftp.uk.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:63 http://ftp.uk.debian.org/debian/ unstable/main libice6 armhf 2:1.0.8-2 [53.4 kB]
+Get:64 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8 armhf 8d-1 [121 kB]
+Get:65 http://ftp.uk.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:66 http://ftp.uk.debian.org/debian/ unstable/main libthai0 armhf 0.1.19-2 [40.5 kB]
+Get:67 http://ftp.uk.debian.org/debian/ unstable/main fontconfig armhf 2.10.2-2 [375 kB]
+Get:68 http://ftp.uk.debian.org/debian/ unstable/main libpango-1.0-0 armhf 1.32.5-5+b1 [248 kB]
+Get:69 http://ftp.uk.debian.org/debian/ unstable/main libpangoft2-1.0-0 armhf 1.32.5-5+b1 [182 kB]
+Get:70 http://ftp.uk.debian.org/debian/ unstable/main libpangocairo-1.0-0 armhf 1.32.5-5+b1 [171 kB]
+Get:71 http://ftp.uk.debian.org/debian/ unstable/main libpaper1 armhf 1.1.24+nmu2 [20.8 kB]
+Get:72 http://ftp.uk.debian.org/debian/ unstable/main libpcrecpp0 armhf 1:8.31-2 [125 kB]
+Get:73 http://ftp.uk.debian.org/debian/ unstable/main libsm6 armhf 2:1.2.1-2 [31.2 kB]
+Get:74 http://ftp.uk.debian.org/debian/ unstable/main libjbig0 armhf 2.0-2 [29.2 kB]
+Get:75 http://ftp.uk.debian.org/debian/ unstable/main libtiff5 armhf 4.0.3-1 [219 kB]
+Get:76 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 armhf 0.9.3-5+b1 [404 kB]
+Get:77 http://ftp.uk.debian.org/debian/ unstable/main libxft2 armhf 2.3.1-1 [53.3 kB]
+Get:78 http://ftp.uk.debian.org/debian/ unstable/main libxss1 armhf 1:1.2.2-1 [16.3 kB]
+Get:79 http://ftp.uk.debian.org/debian/ unstable/main libxt6 armhf 1:1.1.3-1+deb7u1 [170 kB]
+Get:80 http://ftp.uk.debian.org/debian/ unstable/main file armhf 1:5.14-2 [53.9 kB]
+Get:81 http://ftp.uk.debian.org/debian/ unstable/main gettext-base armhf 0.18.3-1 [138 kB]
+Get:82 http://ftp.uk.debian.org/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:83 http://ftp.uk.debian.org/debian/ unstable/main cpp armhf 4:4.8.1-2 [16.9 kB]
+Get:84 http://ftp.uk.debian.org/debian/ unstable/main gettext armhf 0.18.3-1 [1816 kB]
+Get:85 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:86 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:87 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:88 http://ftp.uk.debian.org/debian/ unstable/main gcc armhf 4:4.8.1-2 [5024 B]
+Get:89 http://ftp.uk.debian.org/debian/ unstable/main libgfortran-4.8-dev armhf 4.8.1-8 [285 kB]
+Get:90 http://ftp.uk.debian.org/debian/ unstable/main gfortran-4.8 armhf 4.8.1-8 [5269 kB]
+Get:91 http://ftp.uk.debian.org/debian/ unstable/main gfortran armhf 4:4.8.1-2 [1132 B]
+Get:92 http://ftp.uk.debian.org/debian/ unstable/main libblas3 armhf 1.2.20110419-5 [191 kB]
+Get:93 http://ftp.uk.debian.org/debian/ unstable/main libblas-dev armhf 1.2.20110419-5 [195 kB]
+Get:94 http://ftp.uk.debian.org/debian/ unstable/main libbz2-dev armhf 1.0.6-4 [32.7 kB]
+Get:95 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8-dev armhf 8d-1 [226 kB]
+Get:96 http://ftp.uk.debian.org/debian/ unstable/main liblapack3 armhf 3.4.2+dfsg-1 [3390 kB]
+Get:97 http://ftp.uk.debian.org/debian/ unstable/main liblapack-dev armhf 3.4.2+dfsg-1 [3661 kB]
+Get:98 http://ftp.uk.debian.org/debian/ unstable/main libtinfo-dev armhf 5.9+20130608-1 [86.6 kB]
+Get:99 http://ftp.uk.debian.org/debian/ unstable/main libncurses5-dev armhf 5.9+20130608-1 [196 kB]
+Get:100 http://ftp.uk.debian.org/debian/ unstable/main libpaper-utils armhf 1.1.24+nmu2 [17.8 kB]
+Get:101 http://ftp.uk.debian.org/debian/ unstable/main libpcre3-dev armhf 1:8.31-2 [348 kB]
+Get:102 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev armhf 1:1.2.8.dfsg-1 [209 kB]
+Get:103 http://ftp.uk.debian.org/debian/ unstable/main libpng12-dev armhf 1.2.49-4 [256 kB]
+Get:104 http://ftp.uk.debian.org/debian/ unstable/main libreadline6-dev armhf 6.2+dfsg-0.1 [158 kB]
+Get:105 http://ftp.uk.debian.org/debian/ unstable/main libreadline-dev armhf 6.2+dfsg-0.1 [896 B]
+Get:106 http://ftp.uk.debian.org/debian/ unstable/main zip armhf 3.0-7 [319 kB]
+Get:107 http://ftp.uk.debian.org/debian/ unstable/main unzip armhf 6.0-9 [186 kB]
+Get:108 http://ftp.uk.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:109 http://ftp.uk.debian.org/debian/ unstable/main tcl8.5 armhf 8.5.14-2 [1553 kB]
+Get:110 http://ftp.uk.debian.org/debian/ unstable/main tk8.5 armhf 8.5.14-2 [1086 kB]
+Get:111 http://ftp.uk.debian.org/debian/ unstable/main r-base-core armhf 3.0.1-6 [21.2 MB]
+Get:112 http://ftp.uk.debian.org/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 76.4 MB in 38s (1978 kB/s)
-(Reading database ... 12878 files and directories currently installed.)
-Preparing to replace libc6-dev:armhf 2.13-38 (using .../libc6-dev_2.17-2_armhf.deb) ...
-Unpacking replacement libc6-dev:armhf ...
-Preparing to replace libc-dev-bin 2.13-38 (using .../libc-dev-bin_2.17-2_armhf.deb) ...
-Unpacking replacement libc-dev-bin ...
-Preparing to replace libc6:armhf 2.13-38 (using .../libc6_2.17-2_armhf.deb) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Unpacking replacement libc6:armhf ...
-Setting up libc6:armhf (2.17-2) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Nothing to restart.
-(Reading database ... 12901 files and directories currently installed.)
-Preparing to replace libtinfo5:armhf 5.9-10 (using .../libtinfo5_5.9+20130504-1_armhf.deb) ...
-Unpacking replacement libtinfo5:armhf ...
-Setting up libtinfo5:armhf (5.9+20130504-1) ...
-(Reading database ... 12901 files and directories currently installed.)
-Preparing to replace libncurses5:armhf 5.9-10 (using .../libncurses5_5.9+20130504-1_armhf.deb) ...
-Unpacking replacement libncurses5:armhf ...
-Setting up libncurses5:armhf (5.9+20130504-1) ...
-(Reading database ... 12901 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_armhf.deb) ...
-Unpacking replacement ncurses-bin ...
-Setting up ncurses-bin (5.9+20130504-1) ...
-(Reading database ... 12899 files and directories currently installed.)
-Preparing to replace zlib1g:armhf 1:1.2.7.dfsg-13 (using .../zlib1g_1%3a1.2.8.dfsg-1_armhf.deb) ...
-Unpacking replacement zlib1g:armhf ...
-Setting up zlib1g:armhf (1:1.2.8.dfsg-1) ...
+Fetched 82.4 MB in 34s (2369 kB/s)
+(Reading database ... 11017 files and directories currently installed.)
+Preparing to replace libgomp1:armhf 4.8.1-3 (using .../libgomp1_4.8.1-8_armhf.deb) ...
+Unpacking replacement libgomp1:armhf ...
+Preparing to replace gcc-4.8-base:armhf 4.8.1-3 (using .../gcc-4.8-base_4.8.1-8_armhf.deb) ...
+Unpacking replacement gcc-4.8-base:armhf ...
+Setting up gcc-4.8-base:armhf (4.8.1-8) ...
+(Reading database ... 11017 files and directories currently installed.)
+Preparing to replace libstdc++6:armhf 4.8.1-3 (using .../libstdc++6_4.8.1-8_armhf.deb) ...
+Unpacking replacement libstdc++6:armhf ...
+Setting up libstdc++6:armhf (4.8.1-8) ...
+Processing triggers for libc-bin ...
+(Reading database ... 11017 files and directories currently installed.)
+Preparing to replace libasan0:armhf 4.8.1-3 (using .../libasan0_4.8.1-8_armhf.deb) ...
+Unpacking replacement libasan0:armhf ...
+Preparing to replace libatomic1:armhf 4.8.1-3 (using .../libatomic1_4.8.1-8_armhf.deb) ...
+Unpacking replacement libatomic1:armhf ...
+Preparing to replace cpp-4.8 4.8.1-3 (using .../cpp-4.8_4.8.1-8_armhf.deb) ...
+Unpacking replacement cpp-4.8 ...
+Preparing to replace libstdc++-4.8-dev:armhf 4.8.1-3 (using .../libstdc++-4.8-dev_4.8.1-8_armhf.deb) ...
+Unpacking replacement libstdc++-4.8-dev:armhf ...
+Preparing to replace g++-4.8 4.8.1-3 (using .../g++-4.8_4.8.1-8_armhf.deb) ...
+Unpacking replacement g++-4.8 ...
+Preparing to replace gcc-4.8 4.8.1-3 (using .../gcc-4.8_4.8.1-8_armhf.deb) ...
+Unpacking replacement gcc-4.8 ...
+Preparing to replace libgcc-4.8-dev:armhf 4.8.1-3 (using .../libgcc-4.8-dev_4.8.1-8_armhf.deb) ...
+Unpacking replacement libgcc-4.8-dev:armhf ...
+Preparing to replace libgcc1:armhf 1:4.8.1-3 (using .../libgcc1_1%3a4.8.1-8_armhf.deb) ...
+Unpacking replacement libgcc1:armhf ...
+Setting up libgcc1:armhf (1:4.8.1-8) ...
+Processing triggers for libc-bin ...
Selecting previously unselected package libpipeline1:armhf.
-(Reading database ... 12899 files and directories currently installed.)
-Unpacking libpipeline1:armhf (from .../libpipeline1_1.2.3-1_armhf.deb) ...
+(Reading database ... 11002 files and directories currently installed.)
+Unpacking libpipeline1:armhf (from .../libpipeline1_1.2.4-1_armhf.deb) ...
+Selecting previously unselected package libudev0:armhf.
+Unpacking libudev0:armhf (from .../libudev0_175-7.2_armhf.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_armhf.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_armhf.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_armhf.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_armhf.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_armhf.deb) ...
Selecting previously unselected package libasprintf0c2:armhf.
-Unpacking libasprintf0c2:armhf (from .../libasprintf0c2_0.18.1.1-10_armhf.deb) ...
+Unpacking libasprintf0c2:armhf (from .../libasprintf0c2_0.18.3-1_armhf.deb) ...
Selecting previously unselected package libmagic1:armhf.
-Unpacking libmagic1:armhf (from .../libmagic1_1%3a5.14-1_armhf.deb) ...
-Selecting previously unselected package libpcre3:armhf.
-Unpacking libpcre3:armhf (from .../libpcre3_1%3a8.31-2_armhf.deb) ...
+Unpacking libmagic1:armhf (from .../libmagic1_1%3a5.14-2_armhf.deb) ...
Selecting previously unselected package libxml2:armhf.
-Unpacking libxml2:armhf (from .../libxml2_2.8.0+dfsg1-7+nmu1_armhf.deb) ...
+Unpacking libxml2:armhf (from .../libxml2_2.9.1+dfsg1-2_armhf.deb) ...
+Selecting previously unselected package libdrm2:armhf.
+Unpacking libdrm2:armhf (from .../libdrm2_2.4.45-3_armhf.deb) ...
+Selecting previously unselected package libffi6:armhf.
+Unpacking libffi6:armhf (from .../libffi6_3.0.13-4_armhf.deb) ...
+Selecting previously unselected package libglapi-mesa:armhf.
+Unpacking libglapi-mesa:armhf (from .../libglapi-mesa_9.1.4-1_armhf.deb) ...
+Selecting previously unselected package libllvm3.2:armhf.
+Unpacking libllvm3.2:armhf (from .../libllvm3.2_1%3a3.2repack-10_armhf.deb) ...
+Selecting previously unselected package libxau6:armhf.
+Unpacking libxau6:armhf (from .../libxau6_1%3a1.0.8-1_armhf.deb) ...
+Selecting previously unselected package libxdmcp6:armhf.
+Unpacking libxdmcp6:armhf (from .../libxdmcp6_1%3a1.1.1-1_armhf.deb) ...
+Selecting previously unselected package libxcb1:armhf.
+Unpacking libxcb1:armhf (from .../libxcb1_1.9.1-3_armhf.deb) ...
+Selecting previously unselected package libxcb-dri2-0:armhf.
+Unpacking libxcb-dri2-0:armhf (from .../libxcb-dri2-0_1.9.1-3_armhf.deb) ...
+Selecting previously unselected package libgbm1:armhf.
+Unpacking libgbm1:armhf (from .../libgbm1_9.1.4-1_armhf.deb) ...
+Selecting previously unselected package libwayland-client0:armhf.
+Unpacking libwayland-client0:armhf (from .../libwayland-client0_1.1.0-2_armhf.deb) ...
+Selecting previously unselected package libwayland-server0:armhf.
+Unpacking libwayland-server0:armhf (from .../libwayland-server0_1.1.0-2_armhf.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:armhf.
+Unpacking libx11-6:armhf (from .../libx11-6_2%3a1.6.0-1_armhf.deb) ...
+Selecting previously unselected package libx11-xcb1:armhf.
+Unpacking libx11-xcb1:armhf (from .../libx11-xcb1_2%3a1.6.0-1_armhf.deb) ...
+Selecting previously unselected package libxcb-render0:armhf.
+Unpacking libxcb-render0:armhf (from .../libxcb-render0_1.9.1-3_armhf.deb) ...
+Selecting previously unselected package libxcb-shape0:armhf.
+Unpacking libxcb-shape0:armhf (from .../libxcb-shape0_1.9.1-3_armhf.deb) ...
+Selecting previously unselected package libxcb-xfixes0:armhf.
+Unpacking libxcb-xfixes0:armhf (from .../libxcb-xfixes0_1.9.1-3_armhf.deb) ...
+Selecting previously unselected package libegl1-mesa:armhf.
+Unpacking libegl1-mesa:armhf (from .../libegl1-mesa_9.1.4-1_armhf.deb) ...
Selecting previously unselected package libexpat1:armhf.
-Unpacking libexpat1:armhf (from .../libexpat1_2.1.0-3_armhf.deb) ...
+Unpacking libexpat1:armhf (from .../libexpat1_2.1.0-4_armhf.deb) ...
Selecting previously unselected package libfreetype6:armhf.
Unpacking libfreetype6:armhf (from .../libfreetype6_2.4.9-1.1_armhf.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:armhf.
-Unpacking libfontconfig1:armhf (from .../libfontconfig1_2.9.0-7.1_armhf.deb) ...
+Unpacking libfontconfig1:armhf (from .../libfontconfig1_2.10.2-2_armhf.deb) ...
+Selecting previously unselected package libxcb-glx0:armhf.
+Unpacking libxcb-glx0:armhf (from .../libxcb-glx0_1.9.1-3_armhf.deb) ...
+Selecting previously unselected package libxfixes3:armhf.
+Unpacking libxfixes3:armhf (from .../libxfixes3_1%3a5.0.1-1_armhf.deb) ...
+Selecting previously unselected package libxdamage1:armhf.
+Unpacking libxdamage1:armhf (from .../libxdamage1_1%3a1.1.4-1_armhf.deb) ...
+Selecting previously unselected package libxext6:armhf.
+Unpacking libxext6:armhf (from .../libxext6_2%3a1.3.2-1_armhf.deb) ...
+Selecting previously unselected package libxxf86vm1:armhf.
+Unpacking libxxf86vm1:armhf (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_armhf.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:armhf.
+Unpacking libgl1-mesa-glx:armhf (from .../libgl1-mesa-glx_9.1.4-1_armhf.deb) ...
Selecting previously unselected package libpixman-1-0:armhf.
-Unpacking libpixman-1-0:armhf (from .../libpixman-1-0_0.26.0-4_armhf.deb) ...
+Unpacking libpixman-1-0:armhf (from .../libpixman-1-0_0.30.0-3_armhf.deb) ...
Selecting previously unselected package libpng12-0:armhf.
Unpacking libpng12-0:armhf (from .../libpng12-0_1.2.49-4_armhf.deb) ...
-Selecting previously unselected package libxau6:armhf.
-Unpacking libxau6:armhf (from .../libxau6_1%3a1.0.7-1_armhf.deb) ...
-Selecting previously unselected package libxdmcp6:armhf.
-Unpacking libxdmcp6:armhf (from .../libxdmcp6_1%3a1.1.1-1_armhf.deb) ...
-Selecting previously unselected package libxcb1:armhf.
-Unpacking libxcb1:armhf (from .../libxcb1_1.8.1-2_armhf.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:armhf.
-Unpacking libx11-6:armhf (from .../libx11-6_2%3a1.5.0-1_armhf.deb) ...
-Selecting previously unselected package libxcb-render0:armhf.
-Unpacking libxcb-render0:armhf (from .../libxcb-render0_1.8.1-2_armhf.deb) ...
Selecting previously unselected package libxcb-shm0:armhf.
-Unpacking libxcb-shm0:armhf (from .../libxcb-shm0_1.8.1-2_armhf.deb) ...
-Selecting previously unselected package libxext6:armhf.
-Unpacking libxext6:armhf (from .../libxext6_2%3a1.3.1-2_armhf.deb) ...
+Unpacking libxcb-shm0:armhf (from .../libxcb-shm0_1.9.1-3_armhf.deb) ...
Selecting previously unselected package libxrender1:armhf.
-Unpacking libxrender1:armhf (from .../libxrender1_1%3a0.9.7-1_armhf.deb) ...
+Unpacking libxrender1:armhf (from .../libxrender1_1%3a0.9.8-1_armhf.deb) ...
Selecting previously unselected package libcairo2:armhf.
-Unpacking libcairo2:armhf (from .../libcairo2_1.12.14-4_armhf.deb) ...
-Selecting previously unselected package libffi6:armhf.
-Unpacking libffi6:armhf (from .../libffi6_3.0.13-4_armhf.deb) ...
+Unpacking libcairo2:armhf (from .../libcairo2_1.12.14-5_armhf.deb) ...
Selecting previously unselected package libglib2.0-0:armhf.
-Unpacking libglib2.0-0:armhf (from .../libglib2.0-0_2.36.1-2build1_armhf.deb) ...
+Unpacking libglib2.0-0:armhf (from .../libglib2.0-0_2.36.3-3_armhf.deb) ...
Selecting previously unselected package libcroco3:armhf.
-Unpacking libcroco3:armhf (from .../libcroco3_0.6.6-2_armhf.deb) ...
+Unpacking libcroco3:armhf (from .../libcroco3_0.6.8-2_armhf.deb) ...
Selecting previously unselected package libdatrie1:armhf.
Unpacking libdatrie1:armhf (from .../libdatrie1_0.2.6-2_armhf.deb) ...
-Selecting previously unselected package libunistring0:armhf.
-Unpacking libunistring0:armhf (from .../libunistring0_0.9.3-5+b1_armhf.deb) ...
-Selecting previously unselected package libgettextpo0:armhf.
-Unpacking libgettextpo0:armhf (from .../libgettextpo0_0.18.1.1-10_armhf.deb) ...
-Selecting previously unselected package gcc-4.8-base:armhf.
-Unpacking gcc-4.8-base:armhf (from .../gcc-4.8-base_4.8.0-7_armhf.deb) ...
Selecting previously unselected package libgfortran3:armhf.
-Unpacking libgfortran3:armhf (from .../libgfortran3_4.8.0-7_armhf.deb) ...
+Unpacking libgfortran3:armhf (from .../libgfortran3_4.8.1-8_armhf.deb) ...
+Selecting previously unselected package libgraphite2-3:armhf.
+Unpacking libgraphite2-3:armhf (from .../libgraphite2-3_1.2.3-1_armhf.deb) ...
+Selecting previously unselected package libharfbuzz0a:armhf.
+Unpacking libharfbuzz0a:armhf (from .../libharfbuzz0a_0.9.19-1_armhf.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:armhf.
@@ -422,12 +456,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:armhf.
Unpacking libthai0:armhf (from .../libthai0_0.1.19-2_armhf.deb) ...
-Selecting previously unselected package libxft2:armhf.
-Unpacking libxft2:armhf (from .../libxft2_2.3.1-1_armhf.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_armhf.deb) ...
-Selecting previously unselected package libpango1.0-0:armhf.
-Unpacking libpango1.0-0:armhf (from .../libpango1.0-0_1.30.0-1_armhf.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_armhf.deb) ...
+Selecting previously unselected package libpango-1.0-0:armhf.
+Unpacking libpango-1.0-0:armhf (from .../libpango-1.0-0_1.32.5-5+b1_armhf.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:armhf.
+Unpacking libpangoft2-1.0-0:armhf (from .../libpangoft2-1.0-0_1.32.5-5+b1_armhf.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:armhf.
+Unpacking libpangocairo-1.0-0:armhf (from .../libpangocairo-1.0-0_1.32.5-5+b1_armhf.deb) ...
Selecting previously unselected package libpaper1:armhf.
Unpacking libpaper1:armhf (from .../libpaper1_1.1.24+nmu2_armhf.deb) ...
Selecting previously unselected package libpcrecpp0:armhf.
@@ -437,47 +473,40 @@ Unpacking libsm6:armhf (from .../libsm6_2%3a1.2.1-2_armhf.deb) ...
Selecting previously unselected package libjbig0:armhf.
Unpacking libjbig0:armhf (from .../libjbig0_2.0-2_armhf.deb) ...
Selecting previously unselected package libtiff5:armhf.
-Unpacking libtiff5:armhf (from .../libtiff5_4.0.2-6_armhf.deb) ...
+Unpacking libtiff5:armhf (from .../libtiff5_4.0.3-1_armhf.deb) ...
+Selecting previously unselected package libunistring0:armhf.
+Unpacking libunistring0:armhf (from .../libunistring0_0.9.3-5+b1_armhf.deb) ...
+Selecting previously unselected package libxft2:armhf.
+Unpacking libxft2:armhf (from .../libxft2_2.3.1-1_armhf.deb) ...
Selecting previously unselected package libxss1:armhf.
Unpacking libxss1:armhf (from .../libxss1_1%3a1.2.2-1_armhf.deb) ...
Selecting previously unselected package libxt6:armhf.
-Unpacking libxt6:armhf (from .../libxt6_1%3a1.1.3-1_armhf.deb) ...
-Selecting previously unselected package libmpc3:armhf.
-Unpacking libmpc3:armhf (from .../libmpc3_1.0.1-1_armhf.deb) ...
+Unpacking libxt6:armhf (from .../libxt6_1%3a1.1.3-1+deb7u1_armhf.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_armhf.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_armhf.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_armhf.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_armhf.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Preparing to replace libstdc++6-4.6-dev 4.6.3-15 (using .../libstdc++6-4.6-dev_4.6.4-2_armhf.deb) ...
-Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.3-15 (using .../g++-4.6_4.6.4-2_armhf.deb) ...
-Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.3-15 (using .../gcc-4.6_4.6.4-2_armhf.deb) ...
-Unpacking replacement gcc-4.6 ...
-Preparing to replace cpp-4.6 4.6.3-15 (using .../cpp-4.6_4.6.4-2_armhf.deb) ...
-Unpacking replacement cpp-4.6 ...
-Preparing to replace gcc-4.6-base:armhf 4.6.3-15 (using .../gcc-4.6-base_4.6.4-2_armhf.deb) ...
-Unpacking replacement gcc-4.6-base:armhf ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15+b1_armhf.deb) ...
-Selecting previously unselected package libasprintf-dev:armhf.
-Unpacking libasprintf-dev:armhf (from .../libasprintf-dev_0.18.1.1-10_armhf.deb) ...
-Selecting previously unselected package libgettextpo-dev:armhf.
-Unpacking libgettextpo-dev:armhf (from .../libgettextpo-dev_0.18.1.1-10_armhf.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
+Preparing to replace cpp 4:4.8.1-1 (using .../cpp_4%3a4.8.1-2_armhf.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_armhf.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_armhf.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130509_all.deb) ...
-Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_armhf.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Preparing to replace gcc 4:4.8.1-1 (using .../gcc_4%3a4.8.1-2_armhf.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
+Selecting previously unselected package libgfortran-4.8-dev:armhf.
+Unpacking libgfortran-4.8-dev:armhf (from .../libgfortran-4.8-dev_4.8.1-8_armhf.deb) ...
+Selecting previously unselected package gfortran-4.8.
+Unpacking gfortran-4.8 (from .../gfortran-4.8_4.8.1-8_armhf.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_armhf.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.8.1-2_armhf.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_armhf.deb) ...
Selecting previously unselected package libblas-dev.
@@ -491,9 +520,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_armhf.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_armhf.deb) ...
Selecting previously unselected package libtinfo-dev:armhf.
-Unpacking libtinfo-dev:armhf (from .../libtinfo-dev_5.9+20130504-1_armhf.deb) ...
+Unpacking libtinfo-dev:armhf (from .../libtinfo-dev_5.9+20130608-1_armhf.deb) ...
Selecting previously unselected package libncurses5-dev:armhf.
-Unpacking libncurses5-dev:armhf (from .../libncurses5-dev_5.9+20130504-1_armhf.deb) ...
+Unpacking libncurses5-dev:armhf (from .../libncurses5-dev_5.9+20130608-1_armhf.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_armhf.deb) ...
Selecting previously unselected package libpcre3-dev:armhf.
@@ -513,54 +542,77 @@ Unpacking unzip (from .../archives/unzip_6.0-9_armhf.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_armhf.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_armhf.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_armhf.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_armhf.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1-1_armhf.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_armhf.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1-1_all.deb) ...
-Setting up libc-dev-bin (2.17-2) ...
-Setting up libc6-dev:armhf (2.17-2) ...
-Setting up libpipeline1:armhf (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:armhf (4.8.1-8) ...
+Setting up libasan0:armhf (4.8.1-8) ...
+Setting up libatomic1:armhf (4.8.1-8) ...
+Setting up cpp-4.8 (4.8.1-8) ...
+Setting up libgcc-4.8-dev:armhf (4.8.1-8) ...
+Setting up libstdc++-4.8-dev:armhf (4.8.1-8) ...
+Setting up gcc-4.8 (4.8.1-8) ...
+Setting up g++-4.8 (4.8.1-8) ...
+Setting up libpipeline1:armhf (1.2.4-1) ...
+Setting up libudev0:armhf (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
-Setting up man-db (2.6.3-6) ...
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:armhf (0.18.1.1-10) ...
-Setting up libmagic1:armhf (1:5.14-1) ...
-Setting up libpcre3:armhf (1:8.31-2) ...
-Setting up libxml2:armhf (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:armhf (2.1.0-3) ...
+Setting up libasprintf0c2:armhf (0.18.3-1) ...
+Setting up libmagic1:armhf (1:5.14-2) ...
+Setting up libxml2:armhf (2.9.1+dfsg1-2) ...
+Setting up libdrm2:armhf (2.4.45-3) ...
+Setting up libffi6:armhf (3.0.13-4) ...
+Setting up libglapi-mesa:armhf (9.1.4-1) ...
+Setting up libllvm3.2:armhf (1:3.2repack-10) ...
+Setting up libxau6:armhf (1:1.0.8-1) ...
+Setting up libxdmcp6:armhf (1:1.1.1-1) ...
+Setting up libxcb1:armhf (1.9.1-3) ...
+Setting up libxcb-dri2-0:armhf (1.9.1-3) ...
+Setting up libgbm1:armhf (9.1.4-1) ...
+Setting up libwayland-client0:armhf (1.1.0-2) ...
+Setting up libwayland-server0:armhf (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:armhf (2:1.6.0-1) ...
+Setting up libx11-xcb1:armhf (2:1.6.0-1) ...
+Setting up libxcb-render0:armhf (1.9.1-3) ...
+Setting up libxcb-shape0:armhf (1.9.1-3) ...
+Setting up libxcb-xfixes0:armhf (1.9.1-3) ...
+Setting up libegl1-mesa:armhf (9.1.4-1) ...
+Setting up libexpat1:armhf (2.1.0-4) ...
Setting up libfreetype6:armhf (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:armhf (2.9.0-7.1) ...
-Setting up libpixman-1-0:armhf (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:armhf (2.10.2-2) ...
+Setting up libxcb-glx0:armhf (1.9.1-3) ...
+Setting up libxfixes3:armhf (1:5.0.1-1) ...
+Setting up libxdamage1:armhf (1:1.1.4-1) ...
+Setting up libxext6:armhf (2:1.3.2-1) ...
+Setting up libxxf86vm1:armhf (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:armhf (9.1.4-1) ...
+Setting up libpixman-1-0:armhf (0.30.0-3) ...
Setting up libpng12-0:armhf (1.2.49-4) ...
-Setting up libxau6:armhf (1:1.0.7-1) ...
-Setting up libxdmcp6:armhf (1:1.1.1-1) ...
-Setting up libxcb1:armhf (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:armhf (2:1.5.0-1) ...
-Setting up libxcb-render0:armhf (1.8.1-2) ...
-Setting up libxcb-shm0:armhf (1.8.1-2) ...
-Setting up libxext6:armhf (2:1.3.1-2) ...
-Setting up libxrender1:armhf (1:0.9.7-1) ...
-Setting up libcairo2:armhf (1.12.14-4) ...
-Setting up libffi6:armhf (3.0.13-4) ...
-Setting up libglib2.0-0:armhf (2.36.1-2build1) ...
+Setting up libxcb-shm0:armhf (1.9.1-3) ...
+Setting up libxrender1:armhf (1:0.9.8-1) ...
+Setting up libcairo2:armhf (1.12.14-5) ...
+Setting up libglib2.0-0:armhf (2.36.3-3) ...
No schema files found: doing nothing.
-Setting up libcroco3:armhf (0.6.6-2) ...
+Setting up libcroco3:armhf (0.6.8-2) ...
Setting up libdatrie1:armhf (0.2.6-2) ...
-Setting up libunistring0:armhf (0.9.3-5+b1) ...
-Setting up libgettextpo0:armhf (0.18.1.1-10) ...
-Setting up gcc-4.8-base:armhf (4.8.0-7) ...
-Setting up libgfortran3:armhf (4.8.0-7) ...
+Setting up libgfortran3:armhf (4.8.1-8) ...
+Setting up libgraphite2-3:armhf (1.2.3-1) ...
+Setting up libharfbuzz0a:armhf (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
@@ -568,35 +620,34 @@ Setting up libice6:armhf (2:1.0.8-2) ...
Setting up libjpeg8:armhf (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:armhf (0.1.19-2) ...
-Setting up libxft2:armhf (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:armhf (1.30.0-1) ...
+Setting up libpango-1.0-0:armhf (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:armhf (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:armhf (1.32.5-5+b1) ...
Setting up libpaper1:armhf (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:armhf (1:8.31-2) ...
Setting up libsm6:armhf (2:1.2.1-2) ...
Setting up libjbig0:armhf (2.0-2) ...
-Setting up libtiff5:armhf (4.0.2-6) ...
+Setting up libtiff5:armhf (4.0.3-1) ...
+Setting up libunistring0:armhf (0.9.3-5+b1) ...
+Setting up libxft2:armhf (2.3.1-1) ...
Setting up libxss1:armhf (1:1.2.2-1) ...
-Setting up libxt6:armhf (1:1.1.3-1) ...
-Setting up libmpc3:armhf (1.0.1-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up gcc-4.6-base:armhf (4.6.4-2) ...
-Setting up cpp-4.6 (4.6.4-2) ...
-Setting up gcc-4.6 (4.6.4-2) ...
-Setting up html2text (1.3.2a-15+b1) ...
-Setting up libasprintf-dev:armhf (0.18.1.1-10) ...
-Setting up libgettextpo-dev:armhf (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:armhf (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up cpp (4:4.8.1-2) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130509) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up gcc (4:4.8.1-2) ...
+Setting up libgfortran-4.8-dev:armhf (4.8.1-8) ...
+Setting up gfortran-4.8 (4.8.1-8) ...
+Setting up gfortran (4:4.8.1-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -608,8 +659,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:armhf (5.9+20130504-1) ...
-Setting up libncurses5-dev:armhf (5.9+20130504-1) ...
+Setting up libtinfo-dev:armhf (5.9+20130608-1) ...
+Setting up libncurses5-dev:armhf (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:armhf (1:8.31-2) ...
Setting up zlib1g-dev:armhf (1:1.2.8.dfsg-1) ...
@@ -619,28 +670,24 @@ Setting up libreadline-dev:armhf (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1-1) ...
-Setting up g++-4.6 (4.6.4-2) ...
-Setting up libstdc++6-4.6-dev (4.6.4-2) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following package was automatically installed and is no longer required:
- libmpc2
-Use 'apt-get autoremove' to remove it.
-0 upgraded, 0 newly installed, 0 to remove and 25 not upgraded.
-Checking correctness of dependencies...
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
+Processing triggers for libc-bin ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
Kernel: Linux 3.2.0-4-mx5 armhf (armv7l)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6-dev_2.17-2 libstdc++6_4.7.2-5 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.2.41-2
-Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.20-3 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 debconf_1.5.49 debfoster_2.7-1.2 debhelper_9.20130509 debian-archive-keyring_2012.4 debian-ports-archive-keyring_2012.12.30 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4- [...]
+Toolchain package versions: binutils_2.23.52.20130612-1 dpkg-dev_1.16.10 g++-4.8_4.8.1-8 gcc-4.8_4.8.1-8 libc6-dev_2.17-5 libstdc++-4.8-dev_4.8.1-8 libstdc++6_4.8.1-8 linux-libc-dev_3.9.5-1
+Package versions: apt_0.9.8.2 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130612-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.4 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.20-3 cpp_4:4.8.1-2 cpp-4.8_4.8.1-8 dash_0.5.7-3 debconf_1.5.50 debconf-i18n_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.19-2 file_1:5 [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -650,28 +697,47 @@ Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-1
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-armhf-sbuild
+SCHROOT_CHROOT_NAME=sid-armhf-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-armhf-sbuild-594eca8e-1203-4682-b4b9-927e11e742da
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+TERM=xterm
+USER=buildd
+USERNAME=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture armhf
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -687,7 +753,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -706,26 +772,28 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
+ double abstol = -1e500; // infinity
+ ^
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -735,13 +803,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -749,7 +817,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -785,9 +853,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -817,79 +885,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_armhf.deb'.
- dpkg-genchanges -B -marmhf Build Daemon (hasse) <buildd_armhf-hasse at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_armhf.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_armhf.deb'.
+ dpkg-genchanges -B -marmhf Build Daemon (hummel) <buildd_armhf-hummel at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_armhf.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130516-1544
+Build finished at 20130804-1042
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_armhf.changes:
+─────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_armhf.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: armhf
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: armhf Build Daemon (hasse) <buildd_armhf-hasse at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: armhf Build Daemon (hummel) <buildd_armhf-hummel at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
- .
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- 881f5ad3c4eaf5e1925a480fb98760eaf89b2d1e 1613250 r-bioc-limma_3.16.3~dfsg-1_armhf.deb
+ e6e732cf1f98308b2d075a5b5d108bb16cf2c00b 860660 r-bioc-limma_3.16.7~dfsg-1_armhf.deb
Checksums-Sha256:
- 59e089acb8a24d1cf3a8369674326f6f37de6ed2b6346aa967b5a6290fb88198 1613250 r-bioc-limma_3.16.3~dfsg-1_armhf.deb
+ bedecb62917b70fb9f7687e577f6e9961a279d44de7939f1602406e9ca03c6eb 860660 r-bioc-limma_3.16.7~dfsg-1_armhf.deb
Files:
- 788737859bfc0547b267614b9f79a646 1613250 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_armhf.deb
+ f1f52021e2c7a12afa9fe8677a85e51a 860660 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_armhf.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_armhf.deb
+r-bioc-limma_3.16.7~dfsg-1_armhf.deb
────────────────────────────────────
new debian package, version 2.0.
- size 1613250 bytes: control archive=1670 bytes.
+ size 860660 bytes: control archive=1634 bytes.
773 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: armhf
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1843
- Depends: libc6 (>= 2.4), r-base-core (>= 3.0.1-1)
+ Installed-Size: 1057
+ Depends: libc6 (>= 2.4), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -901,90 +966,91 @@ r-bioc-limma_3.16.3~dfsg-1_armhf.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/share/doc/r-bioc-limma/
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/share/doc/r-bioc-limma/tests/
--rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 2095 2013-08-04 10:41 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2013-08-04 10:41 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 37564 2013-08-04 10:41 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 995 2013-08-04 10:41 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 11214 2013-08-04 10:41 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 6688 2013-08-04 10:41 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 963 2013-08-04 10:41 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 3424 2013-08-04 10:41 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 6742 2013-08-04 10:41 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 492602 2013-08-04 10:41 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 1392 2013-08-04 10:41 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 2577 2013-08-04 10:41 ./usr/lib/R/site-library/limma/help/aliases.rds
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 45597 2013-08-04 10:41 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 104280 2013-08-04 10:41 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 1711 2013-08-04 10:41 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 673 2013-08-04 10:41 ./usr/lib/R/site-library/limma/doc/index.html
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 3098 2013-08-04 10:41 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 6386 2013-08-04 10:41 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 1076 2013-08-04 10:41 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 5952 2013-08-04 10:41 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 542 2013-08-04 10:41 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 219 2013-08-04 10:41 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 10085 2013-08-04 10:41 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 4130 2013-08-04 10:41 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 1056 2013-08-04 10:41 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 207869 2013-08-04 10:41 ./usr/lib/R/site-library/limma/R/limma.rdb
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+drwxr-xr-x root/root 0 2013-08-04 10:41 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
-drwxr-xr-x root/root 0 2013-05-16 15:43 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-16 15:43 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/lib/R/site-library/limma/
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 1711 2013-05-16 15:43 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 45597 2013-05-16 15:43 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 806089 2013-05-16 15:43 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 102936 2013-05-16 15:43 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 673 2013-05-16 15:43 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 2046 2013-05-16 15:43 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 11214 2013-05-16 15:43 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 494570 2013-05-16 15:43 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3407 2013-05-16 15:43 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 2567 2013-05-16 15:44 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 1398 2013-05-16 15:43 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 6703 2013-05-16 15:44 ./usr/lib/R/site-library/limma/help/AnIndex
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 6692 2013-05-16 15:44 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 541 2013-05-16 15:44 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 6375 2013-05-16 15:44 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 1074 2013-05-16 15:43 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 5944 2013-05-16 15:44 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 3089 2013-05-16 15:44 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 219 2013-05-16 15:44 ./usr/lib/R/site-library/limma/Meta/vignette.rds
-drwxr-xr-x root/root 0 2013-05-16 15:43 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 206552 2013-05-16 15:43 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 4120 2013-05-16 15:43 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 1056 2013-05-16 15:43 ./usr/lib/R/site-library/limma/R/limma
-drwxr-xr-x root/root 0 2013-05-16 15:44 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 37337 2013-05-16 15:44 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2013-05-16 15:44 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 10085 2013-05-16 15:44 ./usr/lib/R/site-library/limma/INDEX
--rw-r--r-- root/root 995 2013-05-16 15:43 ./usr/lib/R/site-library/limma/DESCRIPTION
--rw-r--r-- root/root 963 2013-05-16 15:43 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-armhf-sbuild-4903599b-f667-4a26-b3f2-66d4de1914b2/build/buildd-r-bioc-limma_3.16.3~dfsg-1-armhf-JigfHE
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: armhf
-Build-Space: 5848
-Build-Time: 93
+Build Architecture: armhf
+Build-Space: 3560
+Build-Time: 102
Distribution: sid
-Install-Time: 235
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: armhf
+Install-Time: 499
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: armhf
Package: r-bioc-limma
-Package-Time: 445
-Source-Version: 3.16.3~dfsg-1
-Space: 5848
+Package-Time: 730
+Source-Version: 3.16.7~dfsg-1
+Space: 3560
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130516-1544
-Build needed 00:07:25, 5848k disc space
-Signature with key '22A8BF43' requested:
+Finished at 20130804-1042
+Build needed 00:12:10, 3560k disc space
+Signature with key '90FF37DC' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_armhf.changes 90FF37DC
+Successfully signed changes file
diff --git a/hurd-i386.log b/hurd-i386.log
index e91cd0f..a0c8afe 100644
--- a/hurd-i386.log
+++ b/hurd-i386.log
@@ -1,70 +1,76 @@
-From buildd at mozart.debian.net Fri May 17 12:56:00 2013
-Return-path: <buildd at mozart.debian.net>
+From buildd at bach.debian.net Sun Aug 04 15:21:18 2013
+Return-path: <buildd at bach.debian.net>
Received: from callisto.debian.net ([80.87.129.151])
by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at mozart.debian.net>)
- id 1UdKCT-0005vt-Ji
- for logs at buildd.debian.org; Fri, 17 May 2013 12:55:58 +0000
-Received: from mozart.debian.net ([10.1.0.1])
+ (Exim 4.72) (envelope-from <buildd at bach.debian.net>)
+ id 1V607S-0001yd-DA
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 15:21:18 +0000
+Received: from bach.debian.net ([10.3.0.1])
by callisto.debian.net with esmtp (Exim 4.72)
- (envelope-from <buildd at mozart.debian.net>)
- id 1UdKCO-0000Dn-A2; Fri, 17 May 2013 13:55:52 +0100
-Received: from buildd by mozart.debian.net with local (Exim 4.80)
- (envelope-from <buildd at mozart.debian.net>)
- id 1UdKCO-0006d6-2N; Fri, 17 May 2013 12:55:52 +0000
-Content-Transfer-Encoding: binary
+ (envelope-from <buildd at bach.debian.net>)
+ id 1V607Q-0001I5-2V; Sun, 04 Aug 2013 16:21:16 +0100
+Received: from buildd by bach.debian.net with local (Exim 4.80)
+ (envelope-from <buildd at bach.debian.net>)
+ id 1V607f-0005vw-BW; Sun, 04 Aug 2013 15:21:31 +0000
MIME-Version: 1.0
-X-Mailer: MIME::Lite 3.027 (F2.78; A2.08; B3.08; Q3.08)
-Date: Fri, 17 May 2013 12:55:51 +0000
-From: Build Daemon <buildd at mozart.debian.net>
-To: samuel.thibault at ens-lyon.org, mbanck at gmx.net, logs at buildd.debian-ports.org,
- logs at buildd.debian.org, debian-hurd-build-logs at lists.alioth.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on hurd-i386
+Content-Transfer-Encoding: binary
+X-Mailer: MIME::Lite 3.027 (F2.78; A2.07; B3.08; Q3.08)
+Date: Sun, 4 Aug 2013 15:21:30 +0000
+From: Build Daemon <buildd at bach.debian.net>
+To: samuel.thibault at ens-lyon.org, mbanck at gmx.net, logs at buildd.debian.org,
+ debian-hurd-build-logs at lists.alioth.debian.org
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on hurd-i386
(dist=sid)
-Message-Id: <E1UdKCO-0006d6-2N at mozart.debian.net>
+Message-Id: <E1V607f-0005vw-BW at bach.debian.net>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on mozart.debian.net
+sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on bach.debian.net
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (hurd-i386) 17 mai 2013 12:46 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (hurd-i386) 04 Aug 2013 15:03 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
Architecture: hurd-i386
+Ign file: ./ InRelease
Ign file: ./ Release.gpg
Ign file: ./ Release
Ign file: ./ Translation-en
-Hit http://ftp.fr.debian.org sid Release.gpg
-Hit http://ftp.fr.debian.org sid Release
-Hit http://incoming.debian.org sid Release.gpg
-Get:1 http://incoming.debian.org buildd-sid Release.gpg [1571 B]
+Get:1 http://ftp.fr.debian.org sid InRelease [204 kB]
+Get:2 http://incoming.debian.org sid InRelease [204 kB]
+Get:3 http://incoming.debian.org buildd-sid InRelease [111 kB]
Hit http://ftp.fr.debian.org sid/main Sources/DiffIndex
Hit http://ftp.fr.debian.org sid/contrib Sources/DiffIndex
Hit http://ftp.fr.debian.org sid/non-free Sources/DiffIndex
-Hit http://incoming.debian.org sid Release
Hit http://ftp.fr.debian.org sid/main hurd-i386 Packages/DiffIndex
Hit http://ftp.fr.debian.org sid/contrib hurd-i386 Packages/DiffIndex
Hit http://ftp.fr.debian.org sid/contrib Translation-en/DiffIndex
Hit http://ftp.fr.debian.org sid/main Translation-en/DiffIndex
-Get:2 http://incoming.debian.org buildd-sid Release [109 kB]
-Hit http://incoming.debian.org sid/main Sources/DiffIndex
+Get:4 http://incoming.debian.org sid/main Sources/DiffIndex [7876 B]
Hit http://incoming.debian.org sid/contrib Sources/DiffIndex
-Hit http://incoming.debian.org sid/non-free Sources/DiffIndex
-Hit http://incoming.debian.org sid/main hurd-i386 Packages/DiffIndex
+Get:5 http://incoming.debian.org sid/non-free Sources/DiffIndex [7819 B]
+Get:6 http://incoming.debian.org sid/main hurd-i386 Packages/DiffIndex [7876 B]
Hit http://incoming.debian.org sid/contrib hurd-i386 Packages/DiffIndex
Hit http://incoming.debian.org sid/contrib Translation-en/DiffIndex
-Hit http://incoming.debian.org sid/main Translation-en/DiffIndex
-Get:3 http://incoming.debian.org buildd-sid/main Sources [107 kB]
-Get:4 http://incoming.debian.org buildd-sid/contrib Sources [873 B]
-Get:5 http://incoming.debian.org buildd-sid/non-free Sources [2683 B]
-Get:6 http://incoming.debian.org buildd-sid/main hurd-i386 Packages [51.9 kB]
-Get:7 http://incoming.debian.org buildd-sid/contrib hurd-i386 Packages [14 B]
-Get:8 http://incoming.debian.org buildd-sid/contrib Translation-en [585 B]
-Get:9 http://incoming.debian.org buildd-sid/main Translation-en [75.6 kB]
-Fetched 349 kB in 54s (6424 B/s)
+Get:7 http://incoming.debian.org sid/main Translation-en/DiffIndex [7876 B]
+Hit http://incoming.debian.org buildd-sid/main Sources
+Hit http://incoming.debian.org buildd-sid/contrib Sources
+Hit http://incoming.debian.org buildd-sid/non-free Sources
+Hit http://incoming.debian.org buildd-sid/main hurd-i386 Packages
+Hit http://incoming.debian.org buildd-sid/contrib hurd-i386 Packages
+Hit http://incoming.debian.org buildd-sid/contrib Translation-en
+Hit http://incoming.debian.org buildd-sid/main Translation-en
+Get:8 http://incoming.debian.org sid/main 2013-08-04-1432.35.pdiff [7199 B]
+Get:9 http://incoming.debian.org sid/non-free 2013-08-04-1432.35.pdiff [739 B]
+Get:10 http://incoming.debian.org sid/main hurd-i386 2013-08-04-1432.35.pdiff [31.2 kB]
+Get:11 http://incoming.debian.org sid/main 2013-08-04-1432.35.pdiff [1767 B]
+Get:12 http://incoming.debian.org sid/main 2013-08-04-1432.35.pdiff [7199 B]
+Get:13 http://incoming.debian.org sid/non-free 2013-08-04-1432.35.pdiff [739 B]
+Get:14 http://incoming.debian.org sid/main hurd-i386 2013-08-04-1432.35.pdiff [31.2 kB]
+Get:15 http://incoming.debian.org sid/main 2013-08-04-1432.35.pdiff [1767 B]
+Fetched 592 kB in 2min 35s (3815 B/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -84,12 +90,12 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://ftp.fr.debian.org/debian/ sid/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://ftp.fr.debian.org/debian/ sid/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://ftp.fr.debian.org/debian/ sid/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 0s (1211 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian/ sid/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian/ sid/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian/ sid/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (198 kB/s)
Download complete and in download only mode
Check arch
@@ -110,17 +116,19 @@ Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- gcc-4.6-base libboost-iostreams1.49.0
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libcwidget3 libprocps0
+ libsigc++-2.0-0c2a libusb-0.1-4
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 25 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- gcc-4.6-base libboost-iostreams1.49.0
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libcwidget3 libprocps0
+ libsigc++-2.0-0c2a libusb-0.1-4
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 25 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -129,10 +137,10 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, hurd, libc-bin, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc0.3-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), hurd-dev, debhelper (>= 9), cdbs, r-base-dev
Checking for already installed dependencies...
-base-files: already installed (7.1)
+base-files: already installed (7.2)
base-passwd: already installed (3.5.26)
bash: already installed (4.2+dfsg-1)
-bsdutils: already installed (1:2.20.1-5.3)
+bsdutils: already installed (1:2.20.1-5.4)
coreutils: already installed (8.13-3.2)
dash: already installed (0.5.7-3+b1)
debianutils: already installed (4.3.4)
@@ -140,27 +148,27 @@ diffutils: already installed (1:3.2-8)
dpkg: already installed (1.16.10)
e2fsprogs: already installed (1.42.5-1.1)
findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-hurd: already installed (20130226-1)
+grep: already installed (2.14-2)
+gzip: already installed (1.6-1)
+hostname: already installed (3.13)
+hurd: already installed (20130620-1)
libc-bin: already installed (2.13-38)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9+20130504-1)
-perl-base: already installed (5.14.2-18)
+ncurses-base: already installed (5.9+20130608-1)
+ncurses-bin: already installed (5.9+20130608-1)
+perl-base: already installed (5.14.2-21)
sed: already installed (4.2.1-10)
sysvinit: already installed (2.88dsf-41)
sysvinit-utils: already installed (2.88dsf-41)
tar: already installed (1.26+dfsg-0.1)
-util-linux: already installed (2.20.1-5.3)
-libc0.3-dev: already installed (2.13-38)
-gcc: already installed (4:4.7.2-1 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.7.2-1 >= 4:4.4.3 is satisfied)
+util-linux: already installed (2.20.1-5.4)
+libc0.3-dev: already installed (2.17-7)
+gcc: already installed (4:4.8.1-2 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.8.1-1 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.2+b1)
dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-hurd-dev: already installed (20130226-1)
+hurd-dev: already installed (20130620-1)
debhelper: missing
-Using default version 9.20130516
+Using default version 9.20130630
cdbs: missing
r-base-dev: missing
Checking for dependency conflicts...
@@ -169,22 +177,24 @@ Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- gcc-4.6-base libboost-iostreams1.49.0
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libcwidget3 libprocps0
+ libsigc++-2.0-0c2a libusb-0.1-4
Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base
- gfortran gfortran-4.7 html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3
- libdatrie1 libexpat1 libfontconfig1 libfreetype6 libgettextpo-dev
- libgettextpo0 libgfortran-4.7-dev libgfortran3 libice6 libjbig0 libjpeg8
- libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0
- libpixman-1-0 libpng12-dev libreadline-dev libreadline6-dev libsm6
- libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libxcb-render0
- libxcb-shm0 libxext6 libxft2 libxrender1 libxss1 libxt6 po-debconf
+ gfortran gfortran-4.8 intltool-debian libasprintf0c2 libblas-dev libblas3
+ libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libfontconfig1
+ libfreetype6 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx libglapi-mesa
+ libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev
+ libpcrecpp0 libpixman-1-0 libpng12-dev libreadline-dev libreadline6-dev
+ libsm6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-xcb1
+ libxcb-dri2-0 libxcb-glx0 libxcb-render0 libxcb-shm0 libxdamage1 libxext6
+ libxfixes3 libxft2 libxrender1 libxss1 libxt6 libxxf86vm1 po-debconf
r-base-core tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
Suggested packages:
- devscripts dh-make gettext-doc gfortran-doc gfortran-4.7-doc
+ devscripts dh-make gettext-doc gfortran-doc gfortran-4.8-doc
libgfortran3-dbg ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp libmail-box-perl
ess r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
@@ -192,82 +202,102 @@ Suggested packages:
texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libmail-sendmail-perl
- r-recommended r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl
- libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
+ autotools-dev autopoint libasprintf-dev libgettextpo-dev libgl1-mesa-dri
+ libmail-sendmail-perl r-recommended r-doc-html xterm x-terminal-emulator
+ libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
+ x11-xserver-utils
The following NEW packages will be installed:
cdbs debhelper file fontconfig fontconfig-config fonts-dejavu-core gettext
- gettext-base gfortran gfortran-4.7 html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2 libcroco3
- libdatrie1 libexpat1 libfontconfig1 libfreetype6 libgettextpo-dev
- libgettextpo0 libgfortran-4.7-dev libgfortran3 libice6 libjbig0 libjpeg8
+ gettext-base gfortran gfortran-4.8 intltool-debian libasprintf0c2
+ libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
+ libfontconfig1 libfreetype6 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8
libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0
- libpixman-1-0 libpng12-dev libreadline-dev libreadline6-dev libsm6
- libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libxcb-render0
- libxcb-shm0 libxext6 libxft2 libxrender1 libxss1 libxt6 po-debconf
- r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common
- xdg-utils zip
-0 upgraded, 68 newly installed, 0 to remove and 25 not upgraded.
-Need to get 0 B/49.9 MB of archives.
-After this operation, 107 MB of additional disk space will be used.
+ libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
+ libpaper1 libpcre3-dev libpcrecpp0 libpixman-1-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
+ libtinfo-dev libunistring0 libx11-xcb1 libxcb-dri2-0 libxcb-glx0
+ libxcb-render0 libxcb-shm0 libxdamage1 libxext6 libxfixes3 libxft2
+ libxrender1 libxss1 libxt6 libxxf86vm1 po-debconf r-base-core r-base-dev
+ tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
+0 upgraded, 76 newly installed, 0 to remove and 30 not upgraded.
+Need to get 0 B/51.5 MB of archives.
+After this operation, 110 MB of additional disk space will be used.
WARNING: The following packages cannot be authenticated!
libasprintf0c2 libmagic1 libexpat1 libfreetype6 ucf fonts-dejavu-core
- ttf-dejavu-core fontconfig-config libfontconfig1 libpixman-1-0
- libxcb-render0 libxcb-shm0 libxext6 libxrender1 libcairo2 libcroco3
- libdatrie1 libunistring0 libgettextpo0 libgfortran3 x11-common libice6
- libjpeg8 libthai-data libthai0 libxft2 fontconfig libpango1.0-0 libpaper1
- libpcrecpp0 libsm6 libjbig0 libtiff5 libxss1 libxt6 file gettext-base cdbs
- html2text libasprintf-dev libgettextpo-dev gettext intltool-debian
- po-debconf debhelper libgfortran-4.7-dev gfortran-4.7 gfortran libblas3
- libblas-dev libbz2-dev libjpeg8-dev liblapack3 liblapack-dev libtinfo-dev
- libncurses5-dev libpaper-utils libpcre3-dev libpng12-dev libreadline6-dev
- libreadline-dev zip unzip xdg-utils tcl8.5 tk8.5 r-base-core r-base-dev
-
Extracting templates from packages: 44%
Extracting templates from packages: 88%
Extracting templates from packages: 100%
+ ttf-dejavu-core fontconfig-config libfontconfig1 libglapi-mesa libx11-xcb1
+ libxcb-dri2-0 libxcb-glx0 libxfixes3 libxdamage1 libxext6 libxxf86vm1
+ libgl1-mesa-glx libpixman-1-0 libxcb-render0 libxcb-shm0 libxrender1
+ libcairo2 libcroco3 libdatrie1 libgfortran3 libgraphite2-3 libharfbuzz0a
+ x11-common libice6 libjpeg8 libthai-data libthai0 fontconfig libpango-1.0-0
+ libpangoft2-1.0-0 libpangocairo-1.0-0 libpaper1 libpcrecpp0 libsm6 libjbig0
+ libtiff5 libunistring0 libxft2 libxss1 libxt6 file gettext-base cdbs gettext
+ intltool-debian po-debconf debhelper libgfortran-4.8-dev gfortran-4.8
+ gfortran libblas3 libblas-dev libbz2-dev libjpeg8-dev liblapack3
+ liblapack-dev libtinfo-dev libncurses5-dev libpaper-utils libpcre3-dev
+ libpng12-dev libreadline6-dev libreadline-dev zip unzip xdg-utils tcl8.5
+ tk8.5 r-base-core r-base-dev
+
Extracting templates from packages: 39%
Extracting templates from packages: 78%
Extracting templates from packages: 100%
Preconfiguring packages ...
Authentication warning overridden.
Selecting previously unselected package libasprintf0c2:hurd-i386.
-(Reading database ... 18280 files and directories currently installed.)
-Unpacking libasprintf0c2:hurd-i386 (from .../libasprintf0c2_0.18.1.1-10_hurd-i386.deb) ...
+(Reading database ... 18848 files and directories currently installed.)
+Unpacking libasprintf0c2:hurd-i386 (from .../libasprintf0c2_0.18.3-1_hurd-i386.deb) ...
Selecting previously unselected package libmagic1:hurd-i386.
-Unpacking libmagic1:hurd-i386 (from .../libmagic1_1%3a5.14-1_hurd-i386.deb) ...
+Unpacking libmagic1:hurd-i386 (from .../libmagic1_1%3a5.14-2_hurd-i386.deb) ...
Selecting previously unselected package libexpat1:hurd-i386.
-Unpacking libexpat1:hurd-i386 (from .../libexpat1_2.1.0-3_hurd-i386.deb) ...
+Unpacking libexpat1:hurd-i386 (from .../libexpat1_2.1.0-4_hurd-i386.deb) ...
Selecting previously unselected package libfreetype6:hurd-i386.
Unpacking libfreetype6:hurd-i386 (from .../libfreetype6_2.4.9-1.1_hurd-i386.deb) ...
-Selecting previously unselected package ucf.
Moving old data out of the way
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Selecting previously unselected package ucf.
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:hurd-i386.
-Unpacking libfontconfig1:hurd-i386 (from .../libfontconfig1_2.9.0-7.1_hurd-i386.deb) ...
+Unpacking libfontconfig1:hurd-i386 (from .../libfontconfig1_2.10.2-2_hurd-i386.deb) ...
+Selecting previously unselected package libglapi-mesa:hurd-i386.
+Unpacking libglapi-mesa:hurd-i386 (from .../libglapi-mesa_9.1.4-1_hurd-i386.deb) ...
+Selecting previously unselected package libx11-xcb1:hurd-i386.
+Unpacking libx11-xcb1:hurd-i386 (from .../libx11-xcb1_2%3a1.6.0-1_hurd-i386.deb) ...
+Selecting previously unselected package libxcb-dri2-0:hurd-i386.
+Unpacking libxcb-dri2-0:hurd-i386 (from .../libxcb-dri2-0_1.8.1-2_hurd-i386.deb) ...
+Selecting previously unselected package libxcb-glx0:hurd-i386.
+Unpacking libxcb-glx0:hurd-i386 (from .../libxcb-glx0_1.8.1-2_hurd-i386.deb) ...
+Selecting previously unselected package libxfixes3:hurd-i386.
+Unpacking libxfixes3:hurd-i386 (from .../libxfixes3_1%3a5.0.1-1_hurd-i386.deb) ...
+Selecting previously unselected package libxdamage1:hurd-i386.
+Unpacking libxdamage1:hurd-i386 (from .../libxdamage1_1%3a1.1.4-1_hurd-i386.deb) ...
+Selecting previously unselected package libxext6:hurd-i386.
+Unpacking libxext6:hurd-i386 (from .../libxext6_2%3a1.3.2-1_hurd-i386.deb) ...
+Selecting previously unselected package libxxf86vm1:hurd-i386.
+Unpacking libxxf86vm1:hurd-i386 (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_hurd-i386.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:hurd-i386.
+Unpacking libgl1-mesa-glx:hurd-i386 (from .../libgl1-mesa-glx_9.1.4-1_hurd-i386.deb) ...
Selecting previously unselected package libpixman-1-0:hurd-i386.
-Unpacking libpixman-1-0:hurd-i386 (from .../libpixman-1-0_0.26.0-4_hurd-i386.deb) ...
+Unpacking libpixman-1-0:hurd-i386 (from .../libpixman-1-0_0.30.0-3_hurd-i386.deb) ...
Selecting previously unselected package libxcb-render0:hurd-i386.
Unpacking libxcb-render0:hurd-i386 (from .../libxcb-render0_1.8.1-2_hurd-i386.deb) ...
Selecting previously unselected package libxcb-shm0:hurd-i386.
Unpacking libxcb-shm0:hurd-i386 (from .../libxcb-shm0_1.8.1-2_hurd-i386.deb) ...
-Selecting previously unselected package libxext6:hurd-i386.
-Unpacking libxext6:hurd-i386 (from .../libxext6_2%3a1.3.1-2+b1_hurd-i386.deb) ...
Selecting previously unselected package libxrender1:hurd-i386.
-Unpacking libxrender1:hurd-i386 (from .../libxrender1_1%3a0.9.7-1+b2_hurd-i386.deb) ...
+Unpacking libxrender1:hurd-i386 (from .../libxrender1_1%3a0.9.8-1_hurd-i386.deb) ...
Selecting previously unselected package libcairo2:hurd-i386.
-Unpacking libcairo2:hurd-i386 (from .../libcairo2_1.12.14-4_hurd-i386.deb) ...
+Unpacking libcairo2:hurd-i386 (from .../libcairo2_1.12.14-5_hurd-i386.deb) ...
Selecting previously unselected package libcroco3:hurd-i386.
Unpacking libcroco3:hurd-i386 (from .../libcroco3_0.6.8-2_hurd-i386.deb) ...
Selecting previously unselected package libdatrie1:hurd-i386.
Unpacking libdatrie1:hurd-i386 (from .../libdatrie1_0.2.6-2_hurd-i386.deb) ...
-Selecting previously unselected package libunistring0:hurd-i386.
-Unpacking libunistring0:hurd-i386 (from .../libunistring0_0.9.3-5+b1_hurd-i386.deb) ...
-Selecting previously unselected package libgettextpo0:hurd-i386.
-Unpacking libgettextpo0:hurd-i386 (from .../libgettextpo0_0.18.1.1-10_hurd-i386.deb) ...
Selecting previously unselected package libgfortran3:hurd-i386.
-Unpacking libgfortran3:hurd-i386 (from .../libgfortran3_4.8.0-7_hurd-i386.deb) ...
+Unpacking libgfortran3:hurd-i386 (from .../libgfortran3_4.8.1-8_hurd-i386.deb) ...
+Selecting previously unselected package libgraphite2-3:hurd-i386.
+Unpacking libgraphite2-3:hurd-i386 (from .../libgraphite2-3_1.2.3-1_hurd-i386.deb) ...
+Selecting previously unselected package libharfbuzz0a:hurd-i386.
+Unpacking libharfbuzz0a:hurd-i386 (from .../libharfbuzz0a_0.9.19-1_hurd-i386.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+2_all.deb) ...
Selecting previously unselected package libice6:hurd-i386.
@@ -278,12 +308,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:hurd-i386.
Unpacking libthai0:hurd-i386 (from .../libthai0_0.1.19-2_hurd-i386.deb) ...
-Selecting previously unselected package libxft2:hurd-i386.
-Unpacking libxft2:hurd-i386 (from .../libxft2_2.3.1-1_hurd-i386.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_hurd-i386.deb) ...
-Selecting previously unselected package libpango1.0-0:hurd-i386.
-Unpacking libpango1.0-0:hurd-i386 (from .../libpango1.0-0_1.30.0-1+b2_hurd-i386.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_hurd-i386.deb) ...
+Selecting previously unselected package libpango-1.0-0:hurd-i386.
+Unpacking libpango-1.0-0:hurd-i386 (from .../libpango-1.0-0_1.32.5-5+b1_hurd-i386.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:hurd-i386.
+Unpacking libpangoft2-1.0-0:hurd-i386 (from .../libpangoft2-1.0-0_1.32.5-5+b1_hurd-i386.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:hurd-i386.
+Unpacking libpangocairo-1.0-0:hurd-i386 (from .../libpangocairo-1.0-0_1.32.5-5+b1_hurd-i386.deb) ...
Selecting previously unselected package libpaper1:hurd-i386.
Unpacking libpaper1:hurd-i386 (from .../libpaper1_1.1.24+nmu2_hurd-i386.deb) ...
Selecting previously unselected package libpcrecpp0:hurd-i386.
@@ -293,37 +325,35 @@ Unpacking libsm6:hurd-i386 (from .../libsm6_2%3a1.2.1-2+b1_hurd-i386.deb) ...
Selecting previously unselected package libjbig0:hurd-i386.
Unpacking libjbig0:hurd-i386 (from .../libjbig0_2.0-2+b1_hurd-i386.deb) ...
Selecting previously unselected package libtiff5:hurd-i386.
-Unpacking libtiff5:hurd-i386 (from .../libtiff5_4.0.2-6_hurd-i386.deb) ...
+Unpacking libtiff5:hurd-i386 (from .../libtiff5_4.0.3-1_hurd-i386.deb) ...
+Selecting previously unselected package libunistring0:hurd-i386.
+Unpacking libunistring0:hurd-i386 (from .../libunistring0_0.9.3-5+b1_hurd-i386.deb) ...
+Selecting previously unselected package libxft2:hurd-i386.
+Unpacking libxft2:hurd-i386 (from .../libxft2_2.3.1-1_hurd-i386.deb) ...
Selecting previously unselected package libxss1:hurd-i386.
Unpacking libxss1:hurd-i386 (from .../libxss1_1%3a1.2.2-1+b1_hurd-i386.deb) ...
Selecting previously unselected package libxt6:hurd-i386.
-Unpacking libxt6:hurd-i386 (from .../libxt6_1%3a1.1.3-1+b1_hurd-i386.deb) ...
+Unpacking libxt6:hurd-i386 (from .../libxt6_1%3a1.1.3-1+deb7u1_hurd-i386.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_hurd-i386.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_hurd-i386.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_hurd-i386.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_hurd-i386.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15+b2_hurd-i386.deb) ...
-Selecting previously unselected package libasprintf-dev:hurd-i386.
-Unpacking libasprintf-dev:hurd-i386 (from .../libasprintf-dev_0.18.1.1-10_hurd-i386.deb) ...
-Selecting previously unselected package libgettextpo-dev:hurd-i386.
-Unpacking libgettextpo-dev:hurd-i386 (from .../libgettextpo-dev_0.18.1.1-10_hurd-i386.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_hurd-i386.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_hurd-i386.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
-Selecting previously unselected package libgfortran-4.7-dev:hurd-i386.
-Unpacking libgfortran-4.7-dev:hurd-i386 (from .../libgfortran-4.7-dev_4.7.3-4_hurd-i386.deb) ...
-Selecting previously unselected package gfortran-4.7.
-Unpacking gfortran-4.7 (from .../gfortran-4.7_4.7.3-4_hurd-i386.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Selecting previously unselected package libgfortran-4.8-dev:hurd-i386.
+Unpacking libgfortran-4.8-dev:hurd-i386 (from .../libgfortran-4.8-dev_4.8.1-8_hurd-i386.deb) ...
+Selecting previously unselected package gfortran-4.8.
+Unpacking gfortran-4.8 (from .../gfortran-4.8_4.8.1-8_hurd-i386.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.7.2-1_hurd-i386.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.8.1-2_hurd-i386.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_hurd-i386.deb) ...
Selecting previously unselected package libblas-dev.
@@ -333,13 +363,13 @@ Unpacking libbz2-dev:hurd-i386 (from .../libbz2-dev_1.0.6-4_hurd-i386.deb) ...
Selecting previously unselected package libjpeg8-dev:hurd-i386.
Unpacking libjpeg8-dev:hurd-i386 (from .../libjpeg8-dev_8d-1+b1_hurd-i386.deb) ...
Selecting previously unselected package liblapack3.
-Unpacking liblapack3 (from .../liblapack3_3.4.1-6_hurd-i386.deb) ...
+Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_hurd-i386.deb) ...
Selecting previously unselected package liblapack-dev.
-Unpacking liblapack-dev (from .../liblapack-dev_3.4.1-6_hurd-i386.deb) ...
+Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_hurd-i386.deb) ...
Selecting previously unselected package libtinfo-dev:hurd-i386.
-Unpacking libtinfo-dev:hurd-i386 (from .../libtinfo-dev_5.9+20130504-1_hurd-i386.deb) ...
+Unpacking libtinfo-dev:hurd-i386 (from .../libtinfo-dev_5.9+20130608-1_hurd-i386.deb) ...
Selecting previously unselected package libncurses5-dev:hurd-i386.
-Unpacking libncurses5-dev:hurd-i386 (from .../libncurses5-dev_5.9+20130504-1_hurd-i386.deb) ...
+Unpacking libncurses5-dev:hurd-i386 (from .../libncurses5-dev_5.9+20130608-1_hurd-i386.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_hurd-i386.deb) ...
Selecting previously unselected package libpcre3-dev:hurd-i386.
@@ -357,35 +387,44 @@ Unpacking unzip (from .../unzip_6.0-9_hurd-i386.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_hurd-i386.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_hurd-i386.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_hurd-i386.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_hurd-i386.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1~20130512-1_hurd-i386.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-3_hurd-i386.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1~20130512-1_all.deb) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-3_all.deb) ...
Processing triggers for man-db ...
+Not building database; man-db/auto-update is not 'true'.
Processing triggers for install-info ...
-Setting up libasprintf0c2:hurd-i386 (0.18.1.1-10) ...
-Setting up libmagic1:hurd-i386 (1:5.14-1) ...
-Setting up libexpat1:hurd-i386 (2.1.0-3) ...
+Setting up libasprintf0c2:hurd-i386 (0.18.3-1) ...
+Setting up libmagic1:hurd-i386 (1:5.14-2) ...
+Setting up libexpat1:hurd-i386 (2.1.0-4) ...
Setting up libfreetype6:hurd-i386 (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:hurd-i386 (2.9.0-7.1) ...
-Setting up libpixman-1-0:hurd-i386 (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:hurd-i386 (2.10.2-2) ...
+Setting up libglapi-mesa:hurd-i386 (9.1.4-1) ...
+Setting up libx11-xcb1:hurd-i386 (2:1.6.0-1) ...
+Setting up libxcb-dri2-0:hurd-i386 (1.8.1-2) ...
+Setting up libxcb-glx0:hurd-i386 (1.8.1-2) ...
+Setting up libxfixes3:hurd-i386 (1:5.0.1-1) ...
+Setting up libxdamage1:hurd-i386 (1:1.1.4-1) ...
+Setting up libxext6:hurd-i386 (2:1.3.2-1) ...
+Setting up libxxf86vm1:hurd-i386 (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:hurd-i386 (9.1.4-1) ...
+Setting up libpixman-1-0:hurd-i386 (0.30.0-3) ...
Setting up libxcb-render0:hurd-i386 (1.8.1-2) ...
Setting up libxcb-shm0:hurd-i386 (1.8.1-2) ...
-Setting up libxext6:hurd-i386 (2:1.3.1-2+b1) ...
-Setting up libxrender1:hurd-i386 (1:0.9.7-1+b2) ...
-Setting up libcairo2:hurd-i386 (1.12.14-4) ...
+Setting up libxrender1:hurd-i386 (1:0.9.8-1) ...
+Setting up libcairo2:hurd-i386 (1.12.14-5) ...
Setting up libcroco3:hurd-i386 (0.6.8-2) ...
Setting up libdatrie1:hurd-i386 (0.2.6-2) ...
-Setting up libunistring0:hurd-i386 (0.9.3-5+b1) ...
-Setting up libgettextpo0:hurd-i386 (0.18.1.1-10) ...
-Setting up libgfortran3:hurd-i386 (4.8.0-7) ...
+Setting up libgfortran3:hurd-i386 (4.8.1-8) ...
+Setting up libgraphite2-3:hurd-i386 (1.2.3-1) ...
+Setting up libharfbuzz0a:hurd-i386 (0.9.19-1) ...
Setting up x11-common (1:7.7+2) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
@@ -393,32 +432,32 @@ Setting up libice6:hurd-i386 (2:1.0.8-2+b1) ...
Setting up libjpeg8:hurd-i386 (8d-1+b1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:hurd-i386 (0.1.19-2) ...
-Setting up libxft2:hurd-i386 (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:hurd-i386 (1.30.0-1+b2) ...
+Setting up libpango-1.0-0:hurd-i386 (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:hurd-i386 (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:hurd-i386 (1.32.5-5+b1) ...
Setting up libpaper1:hurd-i386 (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:hurd-i386 (1:8.31-2) ...
Setting up libsm6:hurd-i386 (2:1.2.1-2+b1) ...
Setting up libjbig0:hurd-i386 (2.0-2+b1) ...
-Setting up libtiff5:hurd-i386 (4.0.2-6) ...
+Setting up libtiff5:hurd-i386 (4.0.3-1) ...
+Setting up libunistring0:hurd-i386 (0.9.3-5+b1) ...
+Setting up libxft2:hurd-i386 (2.3.1-1) ...
Setting up libxss1:hurd-i386 (1:1.2.2-1+b1) ...
-Setting up libxt6:hurd-i386 (1:1.1.3-1+b1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up html2text (1.3.2a-15+b2) ...
-Setting up libasprintf-dev:hurd-i386 (0.18.1.1-10) ...
-Setting up libgettextpo-dev:hurd-i386 (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:hurd-i386 (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up libgfortran-4.7-dev:hurd-i386 (4.7.3-4) ...
-Setting up gfortran-4.7 (4.7.3-4) ...
-Setting up gfortran (4:4.7.2-1) ...
+Setting up debhelper (9.20130630) ...
+Setting up libgfortran-4.8-dev:hurd-i386 (4.8.1-8) ...
+Setting up gfortran-4.8 (4.8.1-8) ...
+Setting up gfortran (4:4.8.1-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -426,12 +465,12 @@ Setting up libblas-dev (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
Setting up libbz2-dev:hurd-i386 (1.0.6-4) ...
Setting up libjpeg8-dev:hurd-i386 (8d-1+b1) ...
-Setting up liblapack3 (3.4.1-6) ...
+Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
-Setting up liblapack-dev (3.4.1-6) ...
+Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:hurd-i386 (5.9+20130504-1) ...
-Setting up libncurses5-dev:hurd-i386 (5.9+20130504-1) ...
+Setting up libtinfo-dev:hurd-i386 (5.9+20130608-1) ...
+Setting up libncurses5-dev:hurd-i386 (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:hurd-i386 (1:8.31-2) ...
Setting up libpng12-dev (1.2.49-4) ...
@@ -440,26 +479,27 @@ Setting up libreadline-dev:hurd-i386 (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1~20130512-1) ...
+Setting up r-base-core (3.0.1-3) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1~20130512-1) ...
+Setting up r-base-dev (3.0.1-3) ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- gcc-4.6-base libboost-iostreams1.49.0
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libcwidget3 libprocps0
+ libsigc++-2.0-0c2a libusb-0.1-4
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 25 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded.
Checking correctness of dependencies...
Kernel: GNU 0.3 hurd-i386 (i686-AT386)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.7_4.7.3-4 gcc-4.7_4.7.3-4 gnumach-dev_2:1.3.99.dfsg.git20130501-1 hurd-dev_20130226-1 libc0.3-dev_2.13-38 libstdc++6_4.8.0-7 libstdc++6-4.7-dev_4.7.3-4
-Package versions: adduser_3.113+nmu3 apt_0.9.7.8 apt-utils_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-1 bash-completion_1:2.0-1 binutils_2.22-8 bsdmainutils_9.0.4 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.13-3.2 cpio_2.11+dfsg-0.1 cpp_4:4.7.2-1 cpp-4.7_4.7.3-4 cron_3.0pl1-124 dash_0.5.7-3+b1 debconf_1.5.49 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debian-ports-archive-keyring_2012.12.30 debianutils_4.3.4 diff [...]
+Toolchain package versions: binutils_2.23.52.20130727-1 dpkg-dev_1.16.10 g++-4.8_4.8.1-8 gcc-4.8_4.8.1-8 gnumach-dev_2:1.3.99.dfsg.git20130610-1 hurd-dev_20130620-1 libc0.3-dev_2.17-7 libstdc++-4.8-dev_4.8.1-8 libstdc++6_4.8.1-8
+Package versions: adduser_3.113+nmu3 apt_0.9.8.2 apt-utils_0.9.8.2 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 bash-completion_1:2.0-1 binutils_2.23.52.20130727-1 bsd-mailx_8.1.2-0.20111106cvs-1+b1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.4 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.13-3.2 cpio_2.11+dfsg-1 cpp_4:4.8.1-2 cpp-4.8_4.8.1-8 cron_3.0pl1-124 dash_0.5.7-3+b1 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debian-ports-arch [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -470,12 +510,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
@@ -484,13 +524,12 @@ Check disc space
dpkg-buildpackage
─────────────────
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
+ /usr/bin/fakeroot debian/rules clean
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
dpkg-buildpackage: host architecture hurd-i386
- /usr/bin/fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -504,14 +543,14 @@ dh_clean
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} \; \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
+ debian/rules build-arch
+ /usr/bin/fakeroot debian/rules binary-arch
rm -f *-stamp
if test -d src; then \
find src -regex ".*\..*o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
- debian/rules build-arch
- /usr/bin/fakeroot debian/rules binary-arch
test -x debian/rules
mkdir -p "."
test -x debian/rules
@@ -525,26 +564,28 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1~20130512-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-3)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O2 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
+ double abstol = -1e500; // infinity
+ ^
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/src'
** R
** inst
** preparing package for lazy loading
@@ -554,13 +595,13 @@ make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-N
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -568,7 +609,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -604,9 +645,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ cd '/build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl/r-bioc-limma-3.16.7~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -636,79 +677,59 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_hurd-i386.deb'.
- dpkg-genchanges -B -mDebian GNU/Hurd Build Daemon <buildd_hurd-i386-mozart at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_hurd-i386.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_hurd-i386.deb'.
+ dpkg-genchanges -B -mDebian GNU/Hurd Build Daemon <buildd_hurd-i386-bach at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_hurd-i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1254
+Build finished at 20130804-1518
-r-bioc-limma_3.16.3~dfsg-1_hurd-i386.changes:
+r-bioc-limma_3.16.7~dfsg-1_hurd-i386.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: hurd-i386
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: Debian GNU/Hurd Build Daemon <buildd_hurd-i386-mozart at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: Debian GNU/Hurd Build Daemon <buildd_hurd-i386-bach at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
- .
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- 1ae90e6ac4c10ab0c2f4c122ae312bc9d98a9274 1616230 r-bioc-limma_3.16.3~dfsg-1_hurd-i386.deb
+ e26548b55e7a124427f6a8a29c4c25a331d876e9 868118 r-bioc-limma_3.16.7~dfsg-1_hurd-i386.deb
Checksums-Sha256:
- 81323254c575eefc383cc083be78daa19ef1613ac90e2661bb81a7d439a06a88 1616230 r-bioc-limma_3.16.3~dfsg-1_hurd-i386.deb
+ 9ac146eb23bb8ac76ba12615d5be0a33510bbd7866937c7a7deec31aa39670a3 868118 r-bioc-limma_3.16.7~dfsg-1_hurd-i386.deb
Files:
- 88518023dc1356c26dd8a582f54d1f8e 1616230 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_hurd-i386.deb
+ 3a64406b829aaa5370355c0791f30bd3 868118 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_hurd-i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_hurd-i386.deb
+r-bioc-limma_3.16.7~dfsg-1_hurd-i386.deb
────────────────────────────────────────
new debian package, version 2.0.
- size 1616230 bytes: control archive= 1686 bytes.
- 790 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ size 868118 bytes: control archive=1642 bytes.
+ 781 bytes, 16 lines control
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: hurd-i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1846
- Depends: libc0.3 (>= 2.2.6), r-base-core (>= 3.0.1~20130512-1)
+ Installed-Size: 1063
+ Depends: libc0.3 (>= 2.2.6), r-base-core (>= 3.0.1-3)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -720,56 +741,55 @@ r-bioc-limma_3.16.3~dfsg-1_hurd-i386.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 2046 2013-05-17 12:52 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 979 2013-05-17 12:52 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 1060 2013-05-17 12:52 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6375 2013-05-17 12:53 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5944 2013-05-17 12:53 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 3089 2013-05-17 12:53 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 219 2013-05-17 12:53 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 541 2013-05-17 12:53 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 8132 2013-05-17 12:53 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 1056 2013-05-17 12:52 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 206554 2013-05-17 12:52 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 4116 2013-05-17 12:52 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 102936 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 673 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 1711 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 45597 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 806089 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 963 2013-05-17 12:52 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 11214 2013-05-17 12:52 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1418 2013-05-17 12:53 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 495536 2013-05-17 12:53 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3423 2013-05-17 12:53 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6703 2013-05-17 12:53 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2567 2013-05-17 12:53 ./usr/lib/R/site-library/limma/help/aliases.rds
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 37337 2013-05-17 12:53 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2013-05-17 12:53 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 10085 2013-05-17 12:53 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/share/doc/r-bioc-limma/
-drwxr-xr-x root/root 0 2013-05-17 12:53 ./usr/share/doc/r-bioc-limma/tests/
+drwxr-xr-x root/root 0 2013-08-04 15:17 ./
+drwxr-xr-x root/root 0 2013-08-04 15:17 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 15:15 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 15:15 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 15:16 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 15:16 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 2095 2013-08-04 15:15 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 979 2013-08-04 15:15 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2013-08-04 15:16 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 1061 2013-08-04 15:15 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 6386 2013-08-04 15:16 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5952 2013-08-04 15:16 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 3098 2013-08-04 15:16 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 219 2013-08-04 15:16 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 542 2013-08-04 15:16 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+drwxr-xr-x root/root 0 2013-08-04 15:17 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 7756 2013-08-04 15:17 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2013-08-04 15:16 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 1056 2013-08-04 15:16 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 207889 2013-08-04 15:16 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 4134 2013-08-04 15:16 ./usr/lib/R/site-library/limma/R/limma.rdx
+drwxr-xr-x root/root 0 2013-08-04 15:16 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 104280 2013-08-04 15:16 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 673 2013-08-04 15:16 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 1711 2013-08-04 15:16 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 45597 2013-08-04 15:16 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 963 2013-08-04 15:16 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 11214 2013-08-04 15:16 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2013-08-04 15:16 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1421 2013-08-04 15:16 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 498232 2013-08-04 15:16 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3433 2013-08-04 15:16 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 6742 2013-08-04 15:16 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 2577 2013-08-04 15:16 ./usr/lib/R/site-library/limma/help/aliases.rds
+drwxr-xr-x root/root 0 2013-08-04 15:16 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 37564 2013-08-04 15:16 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2013-08-04 15:16 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 10085 2013-08-04 15:16 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 15:17 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 15:17 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 15:17 ./usr/share/doc/r-bioc-limma/
+drwxr-xr-x root/root 0 2013-08-04 15:17 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -783,36 +803,40 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /home/buildd/build/chroot-sid/build/buildd-r-bioc-limma_3.16.3~dfsg-1-hurd-i386-NxeeQl
+Purging /home/buildd/build/chroot-sid/build/buildd-r-bioc-limma_3.16.7~dfsg-1-hurd-i386-ZO7Idl
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- gcc-4.6-base libboost-iostreams1.49.0
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libcwidget3 libprocps0
+ libsigc++-2.0-0c2a libusb-0.1-4
Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 25 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded.
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
- gcc-4.6-base libboost-iostreams1.49.0
+ libboost-iostreams1.48.0 libboost-iostreams1.49.0 libcwidget3 libprocps0
+ libsigc++-2.0-0c2a libusb-0.1-4
Use 'apt-get autoremove' to remove them.
The following packages will be REMOVED:
cdbs* debhelper* file* fontconfig* fontconfig-config* fonts-dejavu-core*
- gettext* gettext-base* gfortran* gfortran-4.7* html2text* intltool-debian*
- libasprintf-dev* libasprintf0c2* libblas-dev* libblas3* libbz2-dev*
- libcairo2* libcroco3* libdatrie1* libexpat1* libfontconfig1* libfreetype6*
- libgettextpo-dev* libgettextpo0* libgfortran-4.7-dev* libgfortran3* libice6*
- libjbig0* libjpeg8* libjpeg8-dev* liblapack-dev* liblapack3* libmagic1*
- libncurses5-dev* libpango1.0-0* libpaper-utils* libpaper1* libpcre3-dev*
- libpcrecpp0* libpixman-1-0* libpng12-dev* libreadline-dev* libreadline6-dev*
- libsm6* libthai-data* libthai0* libtiff5* libtinfo-dev* libunistring0*
- libxcb-render0* libxcb-shm0* libxext6* libxft2* libxrender1* libxss1*
- libxt6* po-debconf* r-base-core* r-base-dev* tcl8.5* tk8.5* ttf-dejavu-core*
- ucf* unzip* x11-common* xdg-utils* zip*
-0 upgraded, 0 newly installed, 68 to remove and 25 not upgraded.
-After this operation, 107 MB disk space will be freed.
-(Reading database ... 21348 files and directories currently installed.)
+ gettext* gettext-base* gfortran* gfortran-4.8* intltool-debian*
+ libasprintf0c2* libblas-dev* libblas3* libbz2-dev* libcairo2* libcroco3*
+ libdatrie1* libexpat1* libfontconfig1* libfreetype6* libgfortran-4.8-dev*
+ libgfortran3* libgl1-mesa-glx* libglapi-mesa* libgraphite2-3* libharfbuzz0a*
+ libice6* libjbig0* libjpeg8* libjpeg8-dev* liblapack-dev* liblapack3*
+ libmagic1* libncurses5-dev* libpango-1.0-0* libpangocairo-1.0-0*
+ libpangoft2-1.0-0* libpaper-utils* libpaper1* libpcre3-dev* libpcrecpp0*
+ libpixman-1-0* libpng12-dev* libreadline-dev* libreadline6-dev* libsm6*
+ libthai-data* libthai0* libtiff5* libtinfo-dev* libunistring0* libx11-xcb1*
+ libxcb-dri2-0* libxcb-glx0* libxcb-render0* libxcb-shm0* libxdamage1*
+ libxext6* libxfixes3* libxft2* libxrender1* libxss1* libxt6* libxxf86vm1*
+ po-debconf* r-base-core* r-base-dev* tcl8.5* tk8.5* ttf-dejavu-core* ucf*
+ unzip* x11-common* xdg-utils* zip*
+0 upgraded, 0 newly installed, 76 to remove and 30 not upgraded.
+After this operation, 110 MB disk space will be freed.
+(Reading database ... 21944 files and directories currently installed.)
Removing r-base-dev ...
Removing cdbs ...
Removing debhelper ...
@@ -820,8 +844,12 @@ Removing file ...
Removing r-base-core ...
Purging configuration files for r-base-core ...
dpkg: warning: while removing r-base-core, directory '/etc/R' not empty so not removed
-Removing libpango1.0-0:hurd-i386 ...
-Purging configuration files for libpango1.0-0:hurd-i386 ...
+Removing libpangocairo-1.0-0:hurd-i386 ...
+Purging configuration files for libpangocairo-1.0-0:hurd-i386 ...
+Removing libpangoft2-1.0-0:hurd-i386 ...
+Purging configuration files for libpangoft2-1.0-0:hurd-i386 ...
+Removing libpango-1.0-0:hurd-i386 ...
+Purging configuration files for libpango-1.0-0:hurd-i386 ...
Removing fontconfig ...
Purging configuration files for fontconfig ...
Removing tk8.5 ...
@@ -842,15 +870,11 @@ Removing intltool-debian ...
Removing gettext ...
Removing gettext-base ...
Removing gfortran ...
-Removing gfortran-4.7 ...
-Removing html2text ...
-Purging configuration files for html2text ...
-Removing libasprintf-dev:hurd-i386 ...
+Removing gfortran-4.8 ...
Removing libasprintf0c2:hurd-i386 ...
Removing liblapack-dev ...
Removing libblas-dev ...
Removing liblapack3 ...
-Purging configuration files for liblapack3 ...
Removing libblas3 ...
Removing libbz2-dev:hurd-i386 ...
Removing libcroco3:hurd-i386 ...
@@ -861,13 +885,19 @@ Removing libdatrie1:hurd-i386 ...
Purging configuration files for libdatrie1:hurd-i386 ...
Removing libexpat1:hurd-i386 ...
Purging configuration files for libexpat1:hurd-i386 ...
+Removing libharfbuzz0a:hurd-i386 ...
+Purging configuration files for libharfbuzz0a:hurd-i386 ...
Removing libfreetype6:hurd-i386 ...
Purging configuration files for libfreetype6:hurd-i386 ...
-Removing libgettextpo-dev:hurd-i386 ...
-Removing libgettextpo0:hurd-i386 ...
-Removing libgfortran-4.7-dev:hurd-i386 ...
+Removing libgfortran-4.8-dev:hurd-i386 ...
Removing libgfortran3:hurd-i386 ...
Purging configuration files for libgfortran3:hurd-i386 ...
+Removing libgl1-mesa-glx:hurd-i386 ...
+Purging configuration files for libgl1-mesa-glx:hurd-i386 ...
+Removing libglapi-mesa:hurd-i386 ...
+Purging configuration files for libglapi-mesa:hurd-i386 ...
+Removing libgraphite2-3:hurd-i386 ...
+Purging configuration files for libgraphite2-3:hurd-i386 ...
Removing libxt6:hurd-i386 ...
Purging configuration files for libxt6:hurd-i386 ...
Removing libsm6:hurd-i386 ...
@@ -898,14 +928,26 @@ Removing libthai-data ...
Removing libtinfo-dev:hurd-i386 ...
Removing libunistring0:hurd-i386 ...
Purging configuration files for libunistring0:hurd-i386 ...
+Removing libx11-xcb1:hurd-i386 ...
+Purging configuration files for libx11-xcb1:hurd-i386 ...
+Removing libxcb-dri2-0:hurd-i386 ...
+Purging configuration files for libxcb-dri2-0:hurd-i386 ...
+Removing libxcb-glx0:hurd-i386 ...
+Purging configuration files for libxcb-glx0:hurd-i386 ...
Removing libxcb-render0:hurd-i386 ...
Purging configuration files for libxcb-render0:hurd-i386 ...
Removing libxcb-shm0:hurd-i386 ...
Purging configuration files for libxcb-shm0:hurd-i386 ...
+Removing libxdamage1:hurd-i386 ...
+Purging configuration files for libxdamage1:hurd-i386 ...
+Removing libxxf86vm1:hurd-i386 ...
+Purging configuration files for libxxf86vm1:hurd-i386 ...
Removing libxss1:hurd-i386 ...
Purging configuration files for libxss1:hurd-i386 ...
Removing libxext6:hurd-i386 ...
Purging configuration files for libxext6:hurd-i386 ...
+Removing libxfixes3:hurd-i386 ...
+Purging configuration files for libxfixes3:hurd-i386 ...
Removing libxrender1:hurd-i386 ...
Purging configuration files for libxrender1:hurd-i386 ...
Removing tcl8.5 ...
@@ -921,6 +963,7 @@ Purging configuration files for x11-common ...
Removing xdg-utils ...
Removing zip ...
Processing triggers for man-db ...
+Not building database; man-db/auto-update is not 'true'.
Processing triggers for install-info ...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -928,17 +971,17 @@ Processing triggers for install-info ...
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: hurd-i386
-Build-Space: 5880
-Build-Time: 170
+Build-Space: 3572
+Build-Time: 235
Distribution: sid
-Install-Time: 211
-Job: r-bioc-limma_3.16.3~dfsg-1
+Install-Time: 398
+Job: r-bioc-limma_3.16.7~dfsg-1
Package: r-bioc-limma
-Package-Time: 465
-Source-Version: 3.16.3~dfsg-1
-Space: 5880
+Package-Time: 854
+Source-Version: 3.16.7~dfsg-1
+Space: 3572
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1254
-Build needed 00:07:45, 5880k disc space
+Finished at 20130804-1518
+Build needed 00:14:14, 3572k disc space
diff --git a/i386.log b/i386.log
index 0128540..d81078b 100644
--- a/i386.log
+++ b/i386.log
@@ -1,60 +1,74 @@
-From buildd at murphy.debian.org Thu May 16 15:43:36 2013
-Return-path: <buildd at murphy.debian.org>
-Received: from mailly.debian.org ([82.195.75.114])
+From buildd at babin.debian.org Sun Aug 04 09:35:23 2013
+Return-path: <buildd at babin.debian.org>
+Received: from mailly.debian.org ([2001:41b8:202:deb:6564:a62:52c3:4b72])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=mailly.debian.org, EMAIL=hostmaster at mailly.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
- (Exim 4.72) (envelope-from <buildd at murphy.debian.org>)
- id 1Ud0LA-0004SJ-81
- for logs at buildd.debian.org; Thu, 16 May 2013 15:43:36 +0000
-Received: from murphy.debian.org ([97.107.116.31])
+ (Exim 4.72) (envelope-from <buildd at babin.debian.org>)
+ id 1V5uih-0000Qc-3M
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 09:35:23 +0000
+Received: from [2001:8d8:880:901::1a1:6] (helo=babin.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=murphy.debian.org, EMAIL=hostmaster at murphy.debian.org (verified)
- by mailly.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:256)
- (Exim 4.80) (envelope-from <buildd at murphy.debian.org>)
- id 1Ud0L9-0000qH-43
- for logs at buildd.debian.org; Thu, 16 May 2013 15:43:35 +0000
-Received: from buildd by murphy.debian.org with local (Exim 4.72)
- (envelope-from <buildd at murphy.debian.org>)
- id 1Ud0Km-000299-Gc; Thu, 16 May 2013 15:43:12 +0000
-Message-Id: <E1Ud0Km-000299-Gc at murphy.debian.org>
-MIME-Version: 1.0
+ CN=babin.debian.org, EMAIL=hostmaster at babin.debian.org (verified)
+ by mailly.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
+ (Exim 4.80) (envelope-from <buildd at babin.debian.org>)
+ id 1V5uif-00067H-O8; Sun, 04 Aug 2013 09:35:21 +0000
+Received: from buildd by babin.debian.org with local (Exim 4.80)
+ (envelope-from <buildd at babin.debian.org>)
+ id 1V5uif-0000Io-8l; Sun, 04 Aug 2013 09:35:21 +0000
Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Thu, 16 May 2013 15:43:12 +0000
-From: buildd on murphy <buildd at murphy.debian.org>
-To: logs at buildd.debian.org,buildd-admin at murphy.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on i386
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 09:35:21 +0000
+From: buildd on babin <buildd at babin.debian.org>
+To: kurt at roeckx.be,logs at buildd.debian.org
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on i386
(dist=sid)
-Key-Id: 76D9491D
+Key-Id: 104A62ED
+Message-Id: <E1V5uif-0000Io-8l at babin.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on murphy.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on babin.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (i386) 16 May 2013 15:41 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (i386) 04 Aug 2013 09:34 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: i386
-Get:1 http://incoming.debian.org sid InRelease [205 kB]
-Get:2 http://ftp.us.debian.org sid InRelease [205 kB]
-Get:3 http://incoming.debian.org buildd-unstable InRelease [111 kB]
-Hit http://ftp.us.debian.org sid/main Sources/DiffIndex
-Get:4 http://incoming.debian.org unstable InRelease [205 kB]
-Hit http://ftp.us.debian.org sid/contrib Sources/DiffIndex
-Hit http://incoming.debian.org sid/main i386 Packages/DiffIndex
-Hit http://ftp.us.debian.org sid/main i386 Packages/DiffIndex
-Hit http://ftp.us.debian.org sid/contrib i386 Packages/DiffIndex
-Hit http://incoming.debian.org buildd-unstable/main Sources
-Hit http://incoming.debian.org buildd-unstable/contrib Sources
-Hit http://incoming.debian.org buildd-unstable/non-free Sources
-Hit http://incoming.debian.org buildd-unstable/main i386 Packages
-Hit http://incoming.debian.org unstable/main Sources/DiffIndex
-Hit http://incoming.debian.org unstable/contrib Sources/DiffIndex
-Fetched 725 kB in 4s (149 kB/s)
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: amd64
+Host Architecture: i386
+Build Architecture: i386
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-aKOauO/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-aKOauO' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-i386-sbuild-ec04878d-719b-49fb-badc-b37d1c9c9389' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://mirror.1und1.de unstable InRelease [204 kB]
+Get:2 http://mirror.1und1.de unstable/main Sources [6890 kB]
+Get:3 http://incoming.debian.org unstable InRelease [204 kB]
+Get:4 http://incoming.debian.org buildd-unstable InRelease [111 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:6 http://mirror.1und1.de unstable/contrib Sources [55.4 kB]
+Get:7 http://mirror.1und1.de unstable/non-free Sources [105 kB]
+Get:8 http://mirror.1und1.de unstable/main i386 Packages [6455 kB]
+Get:9 http://mirror.1und1.de unstable/contrib i386 Packages [48.7 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:12 http://incoming.debian.org unstable/main i386 Packages [6456 kB]
+Get:13 http://incoming.debian.org unstable/contrib i386 Packages [48.7 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [100 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2467 B]
+Get:17 http://incoming.debian.org buildd-unstable/main i386 Packages [89.5 kB]
+Get:18 http://incoming.debian.org buildd-unstable/contrib i386 Packages [1011 B]
+Fetched 27.8 MB in 18s (1516 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -74,180 +88,311 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 3s (331 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (281 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-9H8u2Z/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: already installed (1.18.4-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libexpat1 libexpat1-dev libffi5 libmpc2 libncursesw5 libreadline5 libruby1.8
- libruby1.9.1 libsqlite3-0 libssl-dev libssl1.0.0 libyaml-0-2 mime-support
- ruby ruby1.8 ruby1.8-dev ruby1.9.1 ruby1.9.1-dev rubygems zlib1g-dev
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 16 not upgraded.
-Removing negative dependencies:
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 5 not upgraded.
+Need to get 0 B/764 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 11069 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-vWR70K/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- libexpat1 libexpat1-dev libffi5 libmpc2 libncursesw5 libreadline5 libruby1.8
- libruby1.9.1 libsqlite3-0 libssl-dev libssl1.0.0 libyaml-0-2 mime-support
- ruby ruby1.8 ruby1.8-dev ruby1.9.1 ruby1.9.1-dev rubygems zlib1g-dev
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 16 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.2)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-1)
-bsdutils: already installed (1:2.20.1-5.3)
-coreutils: already installed (8.13-3.3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.17-1)
-login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.3)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9+20130504-1)
-perl-base: already installed (5.14.2-21)
-sed: already installed (4.2.2-1)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-5)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (2.17-1)
-gcc: already installed (4:4.7.2-1 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.7.2-1 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: already installed (9.20130509 >= 9 is satisfied)
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- libexpat1-dev libffi5 libmpc2 libncursesw5 libreadline5 libruby1.8
- libruby1.9.1 libsqlite3-0 libssl-dev libssl1.0.0 libyaml-0-2 mime-support
- ruby ruby1.8 ruby1.8-dev ruby1.9.1 ruby1.9.1-dev rubygems
-Use 'apt-get autoremove' to remove them.
The following extra packages will be installed:
- fontconfig fontconfig-config fonts-dejavu-core gfortran gfortran-4.7
- libblas-dev libblas3 libcairo2 libdatrie1 libfontconfig1 libfreetype6
- libgfortran-4.7-dev libgfortran3 libice6 libjbig0 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3 libncurses5-dev libpango1.0-0 libpaper-utils
- libpaper1 libpcre3-dev libpcrecpp0 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
- libtinfo-dev libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1
- libxdmcp6 libxext6 libxft2 libxrender1 libxss1 libxt6 r-base-core tcl8.5
- tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
+ bsdmainutils cdbs debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0
+ libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libllvm3.2 libmagic1
+ libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
+ libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data
+ libthai0 libtiff5 libtinfo-dev libudev0 libunistring0 libwayland-client0
+ libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0
+ libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1
+ libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1
+ libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core r-base-dev tcl8.5
+ tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- devscripts gfortran-multilib gfortran-doc gfortran-4.7-multilib
- gfortran-4.7-doc libgfortran3-dbg ncurses-doc ttf-baekmuk
- ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp ess r-doc-info r-doc-pdf r-mathlib r-base-html
- texlive-base texlive-latex-base texlive-generic-recommended
- texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
- texlive-latex-recommended texlive-latex-extra texinfo texi2html
- tcl-tclreadline gvfs-bin
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc
+ gfortran-multilib gfortran-doc gfortran-4.8-multilib gfortran-4.8-doc
+ libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
+ ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
+ libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
+ texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
+ texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
+ texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev r-recommended r-doc-html xterm x-terminal-emulator
- libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
- x11-xserver-utils
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- cdbs fontconfig fontconfig-config fonts-dejavu-core gfortran gfortran-4.7
- libblas-dev libblas3 libcairo2 libdatrie1 libfontconfig1 libfreetype6
- libgfortran-4.7-dev libgfortran3 libice6 libjbig0 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3 libncurses5-dev libpango1.0-0 libpaper-utils
- libpaper1 libpcre3-dev libpcrecpp0 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
- libtinfo-dev libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1
- libxdmcp6 libxext6 libxft2 libxrender1 libxss1 libxt6 r-base-core r-base-dev
- tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
-0 upgraded, 58 newly installed, 0 to remove and 16 not upgraded.
-Need to get 21.3 MB/47.2 MB of archives.
-After this operation, 96.3 MB of additional disk space will be used.
-Get:1 http://incoming.debian.org/debian/ sid/main r-base-core i386 3.0.1-1 [21.3 MB]
-Get:2 http://incoming.debian.org/debian/ sid/main r-base-dev all 3.0.1-1 [3896 B]
+ bsdmainutils cdbs debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0
+ libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libllvm3.2 libmagic1
+ libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
+ libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data
+ libthai0 libtiff5 libtinfo-dev libudev0 libunistring0 libwayland-client0
+ libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0
+ libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1
+ libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1
+ libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
+0 upgraded, 100 newly installed, 0 to remove and 5 not upgraded.
+Need to get 67.9 MB/67.9 MB of archives.
+After this operation, 151 MB of additional disk space will be used.
+Get:1 http://mirror.1und1.de/debian/ unstable/main libpipeline1 i386 1.2.4-1 [40.4 kB]
+Get:2 http://mirror.1und1.de/debian/ unstable/main libudev0 i386 175-7.2 [128 kB]
+Get:3 http://mirror.1und1.de/debian/ unstable/main groff-base i386 1.22.2-3 [735 kB]
+Get:4 http://mirror.1und1.de/debian/ unstable/main bsdmainutils i386 9.0.5 [207 kB]
+Get:5 http://mirror.1und1.de/debian/ unstable/main man-db i386 2.6.5-2 [969 kB]
+Get:6 http://mirror.1und1.de/debian/ unstable/main libasprintf0c2 i386 0.18.3-1 [29.7 kB]
+Get:7 http://mirror.1und1.de/debian/ unstable/main libmagic1 i386 1:5.14-2 [218 kB]
+Get:8 http://mirror.1und1.de/debian/ unstable/main libxml2 i386 2.9.1+dfsg1-2 [900 kB]
+Get:9 http://mirror.1und1.de/debian/ unstable/main libdrm2 i386 2.4.45-3 [469 kB]
+Get:10 http://mirror.1und1.de/debian/ unstable/main libffi6 i386 3.0.13-4 [18.2 kB]
+Get:11 http://mirror.1und1.de/debian/ unstable/main libglapi-mesa i386 9.1.4-1 [49.3 kB]
+Get:12 http://mirror.1und1.de/debian/ unstable/main libllvm3.2 i386 1:3.2repack-10 [8436 kB]
+Get:13 http://mirror.1und1.de/debian/ unstable/main libxau6 i386 1:1.0.8-1 [20.9 kB]
+Get:14 http://mirror.1und1.de/debian/ unstable/main libxdmcp6 i386 1:1.1.1-1 [27.0 kB]
+Get:15 http://mirror.1und1.de/debian/ unstable/main libxcb1 i386 1.9.1-3 [53.0 kB]
+Get:16 http://mirror.1und1.de/debian/ unstable/main libxcb-dri2-0 i386 1.9.1-3 [13.3 kB]
+Get:17 http://mirror.1und1.de/debian/ unstable/main libgbm1 i386 9.1.4-1 [469 kB]
+Get:18 http://mirror.1und1.de/debian/ unstable/main libwayland-client0 i386 1.1.0-2 [21.8 kB]
+Get:19 http://mirror.1und1.de/debian/ unstable/main libwayland-server0 i386 1.1.0-2 [32.0 kB]
+Get:20 http://mirror.1und1.de/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:21 http://mirror.1und1.de/debian/ unstable/main libx11-6 i386 2:1.6.0-1 [918 kB]
+Get:22 http://mirror.1und1.de/debian/ unstable/main libx11-xcb1 i386 2:1.6.0-1 [153 kB]
+Get:23 http://mirror.1und1.de/debian/ unstable/main libxcb-render0 i386 1.9.1-3 [19.6 kB]
+Get:24 http://mirror.1und1.de/debian/ unstable/main libxcb-shape0 i386 1.9.1-3 [11.6 kB]
+Get:25 http://mirror.1und1.de/debian/ unstable/main libxcb-xfixes0 i386 1.9.1-3 [15.3 kB]
+Get:26 http://mirror.1und1.de/debian/ unstable/main libegl1-mesa i386 9.1.4-1 [84.2 kB]
+Get:27 http://mirror.1und1.de/debian/ unstable/main libexpat1 i386 2.1.0-4 [136 kB]
+Get:28 http://mirror.1und1.de/debian/ unstable/main libfreetype6 i386 2.4.9-1.1 [454 kB]
+Get:29 http://mirror.1und1.de/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:30 http://mirror.1und1.de/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:31 http://mirror.1und1.de/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:32 http://mirror.1und1.de/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:33 http://mirror.1und1.de/debian/ unstable/main libfontconfig1 i386 2.10.2-2 [320 kB]
+Get:34 http://mirror.1und1.de/debian/ unstable/main libxcb-glx0 i386 1.9.1-3 [33.2 kB]
+Get:35 http://mirror.1und1.de/debian/ unstable/main libxfixes3 i386 1:5.0.1-1 [22.5 kB]
+Get:36 http://mirror.1und1.de/debian/ unstable/main libxdamage1 i386 1:1.1.4-1 [15.1 kB]
+Get:37 http://mirror.1und1.de/debian/ unstable/main libxext6 i386 2:1.3.2-1 [56.3 kB]
+Get:38 http://mirror.1und1.de/debian/ unstable/main libxxf86vm1 i386 1:1.1.2-1+deb7u1 [19.6 kB]
+Get:39 http://mirror.1und1.de/debian/ unstable/main libgl1-mesa-glx i386 9.1.4-1 [132 kB]
+Get:40 http://mirror.1und1.de/debian/ unstable/main libpixman-1-0 i386 0.30.0-3 [521 kB]
+Get:41 http://mirror.1und1.de/debian/ unstable/main libpng12-0 i386 1.2.49-4 [192 kB]
+Get:42 http://mirror.1und1.de/debian/ unstable/main libxcb-shm0 i386 1.9.1-3 [10.8 kB]
+Get:43 http://mirror.1und1.de/debian/ unstable/main libxrender1 i386 1:0.9.8-1 [33.2 kB]
+Get:44 http://mirror.1und1.de/debian/ unstable/main libcairo2 i386 1.12.14-5 [1074 kB]
+Get:45 http://mirror.1und1.de/debian/ unstable/main libglib2.0-0 i386 2.36.3-3 [2037 kB]
+Get:46 http://mirror.1und1.de/debian/ unstable/main libcroco3 i386 0.6.8-2 [133 kB]
+Get:47 http://mirror.1und1.de/debian/ unstable/main libdatrie1 i386 0.2.6-2 [30.9 kB]
+Get:48 http://mirror.1und1.de/debian/ unstable/main libgfortran3 i386 4.8.1-8 [324 kB]
+Get:49 http://mirror.1und1.de/debian/ unstable/main libgraphite2-3 i386 1.2.3-1 [63.1 kB]
+Get:50 http://mirror.1und1.de/debian/ unstable/main libharfbuzz0a i386 0.9.19-1 [438 kB]
+Get:51 http://mirror.1und1.de/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:52 http://mirror.1und1.de/debian/ unstable/main libice6 i386 2:1.0.8-2 [61.7 kB]
+Get:53 http://mirror.1und1.de/debian/ unstable/main libjpeg8 i386 8d-1 [132 kB]
+Get:54 http://mirror.1und1.de/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:55 http://mirror.1und1.de/debian/ unstable/main libthai0 i386 0.1.19-2 [43.5 kB]
+Get:56 http://mirror.1und1.de/debian/ unstable/main fontconfig i386 2.10.2-2 [375 kB]
+Get:57 http://mirror.1und1.de/debian/ unstable/main libpango-1.0-0 i386 1.32.5-5+b1 [263 kB]
+Get:58 http://mirror.1und1.de/debian/ unstable/main libpangoft2-1.0-0 i386 1.32.5-5+b1 [187 kB]
+Get:59 http://mirror.1und1.de/debian/ unstable/main libpangocairo-1.0-0 i386 1.32.5-5+b1 [175 kB]
+Get:60 http://mirror.1und1.de/debian/ unstable/main libpaper1 i386 1.1.24+nmu2 [21.9 kB]
+Get:61 http://mirror.1und1.de/debian/ unstable/main libpcrecpp0 i386 1:8.31-2 [129 kB]
+Get:62 http://mirror.1und1.de/debian/ unstable/main libsm6 i386 2:1.2.1-2 [33.7 kB]
+Get:63 http://mirror.1und1.de/debian/ unstable/main libjbig0 i386 2.0-2 [31.8 kB]
+Get:64 http://mirror.1und1.de/debian/ unstable/main libtiff5 i386 4.0.3-1 [237 kB]
+Get:65 http://mirror.1und1.de/debian/ unstable/main libunistring0 i386 0.9.3-5 [442 kB]
+Get:66 http://mirror.1und1.de/debian/ unstable/main libxft2 i386 2.3.1-1 [61.0 kB]
+Get:67 http://mirror.1und1.de/debian/ unstable/main libxss1 i386 1:1.2.2-1 [17.5 kB]
+Get:68 http://mirror.1und1.de/debian/ unstable/main libxt6 i386 1:1.1.3-1+deb7u1 [206 kB]
+Get:69 http://mirror.1und1.de/debian/ unstable/main file i386 1:5.14-2 [53.7 kB]
+Get:70 http://mirror.1und1.de/debian/ unstable/main gettext-base i386 0.18.3-1 [137 kB]
+Get:71 http://mirror.1und1.de/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:72 http://mirror.1und1.de/debian/ unstable/main gettext i386 0.18.3-1 [1861 kB]
+Get:73 http://mirror.1und1.de/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:74 http://mirror.1und1.de/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:75 http://mirror.1und1.de/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:76 http://mirror.1und1.de/debian/ unstable/main libgfortran-4.8-dev i386 4.8.1-8 [392 kB]
+Get:77 http://mirror.1und1.de/debian/ unstable/main gfortran-4.8 i386 4.8.1-8 [5957 kB]
+Get:78 http://mirror.1und1.de/debian/ unstable/main gfortran i386 4:4.8.1-2 [1124 B]
+Get:79 http://mirror.1und1.de/debian/ unstable/main libblas3 i386 1.2.20110419-5 [213 kB]
+Get:80 http://mirror.1und1.de/debian/ unstable/main libblas-dev i386 1.2.20110419-5 [216 kB]
+Get:81 http://mirror.1und1.de/debian/ unstable/main libbz2-dev i386 1.0.6-4 [31.6 kB]
+Get:82 http://mirror.1und1.de/debian/ unstable/main libjpeg8-dev i386 8d-1 [232 kB]
+Get:83 http://mirror.1und1.de/debian/ unstable/main liblapack3 i386 3.4.2+dfsg-1 [3348 kB]
+Get:84 http://mirror.1und1.de/debian/ unstable/main liblapack-dev i386 3.4.2+dfsg-1 [3707 kB]
+Get:85 http://mirror.1und1.de/debian/ unstable/main libtinfo-dev i386 5.9+20130608-1 [97.4 kB]
+Get:86 http://mirror.1und1.de/debian/ unstable/main libncurses5-dev i386 5.9+20130608-1 [214 kB]
+Get:87 http://mirror.1und1.de/debian/ unstable/main libpaper-utils i386 1.1.24+nmu2 [18.1 kB]
+Get:88 http://mirror.1und1.de/debian/ unstable/main libpcre3-dev i386 1:8.31-2 [351 kB]
+Get:89 http://mirror.1und1.de/debian/ unstable/main zlib1g-dev i386 1:1.2.8.dfsg-1 [214 kB]
+Get:90 http://mirror.1und1.de/debian/ unstable/main libpng12-dev i386 1.2.49-4 [266 kB]
+Get:91 http://mirror.1und1.de/debian/ unstable/main libreadline6-dev i386 6.2+dfsg-0.1 [175 kB]
+Get:92 http://mirror.1und1.de/debian/ unstable/main libreadline-dev i386 6.2+dfsg-0.1 [896 B]
+Get:93 http://mirror.1und1.de/debian/ unstable/main zip i386 3.0-7 [328 kB]
+Get:94 http://mirror.1und1.de/debian/ unstable/main unzip i386 6.0-9 [186 kB]
+Get:95 http://mirror.1und1.de/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:96 http://mirror.1und1.de/debian/ unstable/main tcl8.5 i386 8.5.14-2 [1635 kB]
+Get:97 http://mirror.1und1.de/debian/ unstable/main tk8.5 i386 8.5.14-2 [1193 kB]
+Get:98 http://mirror.1und1.de/debian/ unstable/main r-base-core i386 3.0.1-6 [21.4 MB]
+Get:99 http://mirror.1und1.de/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 21.3 MB in 60s (349 kB/s)
+Fetched 67.9 MB in 13s (4850 kB/s)
+Selecting previously unselected package libpipeline1:i386.
+(Reading database ... 11069 files and directories currently installed.)
+Unpacking libpipeline1:i386 (from .../libpipeline1_1.2.4-1_i386.deb) ...
+Selecting previously unselected package libudev0:i386.
+Unpacking libudev0:i386 (from .../libudev0_175-7.2_i386.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.22.2-3_i386.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_i386.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.5-2_i386.deb) ...
+Selecting previously unselected package libasprintf0c2:i386.
+Unpacking libasprintf0c2:i386 (from .../libasprintf0c2_0.18.3-1_i386.deb) ...
+Selecting previously unselected package libmagic1:i386.
+Unpacking libmagic1:i386 (from .../libmagic1_1%3a5.14-2_i386.deb) ...
+Selecting previously unselected package libxml2:i386.
+Unpacking libxml2:i386 (from .../libxml2_2.9.1+dfsg1-2_i386.deb) ...
+Selecting previously unselected package libdrm2:i386.
+Unpacking libdrm2:i386 (from .../libdrm2_2.4.45-3_i386.deb) ...
+Selecting previously unselected package libffi6:i386.
+Unpacking libffi6:i386 (from .../libffi6_3.0.13-4_i386.deb) ...
+Selecting previously unselected package libglapi-mesa:i386.
+Unpacking libglapi-mesa:i386 (from .../libglapi-mesa_9.1.4-1_i386.deb) ...
+Selecting previously unselected package libllvm3.2:i386.
+Unpacking libllvm3.2:i386 (from .../libllvm3.2_1%3a3.2repack-10_i386.deb) ...
+Selecting previously unselected package libxau6:i386.
+Unpacking libxau6:i386 (from .../libxau6_1%3a1.0.8-1_i386.deb) ...
+Selecting previously unselected package libxdmcp6:i386.
+Unpacking libxdmcp6:i386 (from .../libxdmcp6_1%3a1.1.1-1_i386.deb) ...
+Selecting previously unselected package libxcb1:i386.
+Unpacking libxcb1:i386 (from .../libxcb1_1.9.1-3_i386.deb) ...
+Selecting previously unselected package libxcb-dri2-0:i386.
+Unpacking libxcb-dri2-0:i386 (from .../libxcb-dri2-0_1.9.1-3_i386.deb) ...
+Selecting previously unselected package libgbm1:i386.
+Unpacking libgbm1:i386 (from .../libgbm1_9.1.4-1_i386.deb) ...
+Selecting previously unselected package libwayland-client0:i386.
+Unpacking libwayland-client0:i386 (from .../libwayland-client0_1.1.0-2_i386.deb) ...
+Selecting previously unselected package libwayland-server0:i386.
+Unpacking libwayland-server0:i386 (from .../libwayland-server0_1.1.0-2_i386.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:i386.
+Unpacking libx11-6:i386 (from .../libx11-6_2%3a1.6.0-1_i386.deb) ...
+Selecting previously unselected package libx11-xcb1:i386.
+Unpacking libx11-xcb1:i386 (from .../libx11-xcb1_2%3a1.6.0-1_i386.deb) ...
+Selecting previously unselected package libxcb-render0:i386.
+Unpacking libxcb-render0:i386 (from .../libxcb-render0_1.9.1-3_i386.deb) ...
+Selecting previously unselected package libxcb-shape0:i386.
+Unpacking libxcb-shape0:i386 (from .../libxcb-shape0_1.9.1-3_i386.deb) ...
+Selecting previously unselected package libxcb-xfixes0:i386.
+Unpacking libxcb-xfixes0:i386 (from .../libxcb-xfixes0_1.9.1-3_i386.deb) ...
+Selecting previously unselected package libegl1-mesa:i386.
+Unpacking libegl1-mesa:i386 (from .../libegl1-mesa_9.1.4-1_i386.deb) ...
+Selecting previously unselected package libexpat1:i386.
+Unpacking libexpat1:i386 (from .../libexpat1_2.1.0-4_i386.deb) ...
Selecting previously unselected package libfreetype6:i386.
-(Reading database ... 16154 files and directories currently installed.)
Unpacking libfreetype6:i386 (from .../libfreetype6_2.4.9-1.1_i386.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:i386.
-Unpacking libfontconfig1:i386 (from .../libfontconfig1_2.9.0-7.1_i386.deb) ...
+Unpacking libfontconfig1:i386 (from .../libfontconfig1_2.10.2-2_i386.deb) ...
+Selecting previously unselected package libxcb-glx0:i386.
+Unpacking libxcb-glx0:i386 (from .../libxcb-glx0_1.9.1-3_i386.deb) ...
+Selecting previously unselected package libxfixes3:i386.
+Unpacking libxfixes3:i386 (from .../libxfixes3_1%3a5.0.1-1_i386.deb) ...
+Selecting previously unselected package libxdamage1:i386.
+Unpacking libxdamage1:i386 (from .../libxdamage1_1%3a1.1.4-1_i386.deb) ...
+Selecting previously unselected package libxext6:i386.
+Unpacking libxext6:i386 (from .../libxext6_2%3a1.3.2-1_i386.deb) ...
+Selecting previously unselected package libxxf86vm1:i386.
+Unpacking libxxf86vm1:i386 (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_i386.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:i386.
+Unpacking libgl1-mesa-glx:i386 (from .../libgl1-mesa-glx_9.1.4-1_i386.deb) ...
Selecting previously unselected package libpixman-1-0:i386.
-Unpacking libpixman-1-0:i386 (from .../libpixman-1-0_0.26.0-4_i386.deb) ...
+Unpacking libpixman-1-0:i386 (from .../libpixman-1-0_0.30.0-3_i386.deb) ...
Selecting previously unselected package libpng12-0:i386.
Unpacking libpng12-0:i386 (from .../libpng12-0_1.2.49-4_i386.deb) ...
-Selecting previously unselected package libxau6:i386.
-Unpacking libxau6:i386 (from .../libxau6_1%3a1.0.7-1_i386.deb) ...
-Selecting previously unselected package libxdmcp6:i386.
-Unpacking libxdmcp6:i386 (from .../libxdmcp6_1%3a1.1.1-1_i386.deb) ...
-Selecting previously unselected package libxcb1:i386.
-Unpacking libxcb1:i386 (from .../libxcb1_1.8.1-2_i386.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:i386.
-Unpacking libx11-6:i386 (from .../libx11-6_2%3a1.5.0-1_i386.deb) ...
-Selecting previously unselected package libxcb-render0:i386.
-Unpacking libxcb-render0:i386 (from .../libxcb-render0_1.8.1-2_i386.deb) ...
Selecting previously unselected package libxcb-shm0:i386.
-Unpacking libxcb-shm0:i386 (from .../libxcb-shm0_1.8.1-2_i386.deb) ...
-Selecting previously unselected package libxext6:i386.
-Unpacking libxext6:i386 (from .../libxext6_2%3a1.3.1-2_i386.deb) ...
+Unpacking libxcb-shm0:i386 (from .../libxcb-shm0_1.9.1-3_i386.deb) ...
Selecting previously unselected package libxrender1:i386.
-Unpacking libxrender1:i386 (from .../libxrender1_1%3a0.9.7-1_i386.deb) ...
+Unpacking libxrender1:i386 (from .../libxrender1_1%3a0.9.8-1_i386.deb) ...
Selecting previously unselected package libcairo2:i386.
-Unpacking libcairo2:i386 (from .../libcairo2_1.12.14-4_i386.deb) ...
+Unpacking libcairo2:i386 (from .../libcairo2_1.12.14-5_i386.deb) ...
+Selecting previously unselected package libglib2.0-0:i386.
+Unpacking libglib2.0-0:i386 (from .../libglib2.0-0_2.36.3-3_i386.deb) ...
+Selecting previously unselected package libcroco3:i386.
+Unpacking libcroco3:i386 (from .../libcroco3_0.6.8-2_i386.deb) ...
Selecting previously unselected package libdatrie1:i386.
Unpacking libdatrie1:i386 (from .../libdatrie1_0.2.6-2_i386.deb) ...
Selecting previously unselected package libgfortran3:i386.
-Unpacking libgfortran3:i386 (from .../libgfortran3_4.8.0-7_i386.deb) ...
+Unpacking libgfortran3:i386 (from .../libgfortran3_4.8.1-8_i386.deb) ...
+Selecting previously unselected package libgraphite2-3:i386.
+Unpacking libgraphite2-3:i386 (from .../libgraphite2-3_1.2.3-1_i386.deb) ...
+Selecting previously unselected package libharfbuzz0a:i386.
+Unpacking libharfbuzz0a:i386 (from .../libharfbuzz0a_0.9.19-1_i386.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:i386.
@@ -258,12 +403,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:i386.
Unpacking libthai0:i386 (from .../libthai0_0.1.19-2_i386.deb) ...
-Selecting previously unselected package libxft2:i386.
-Unpacking libxft2:i386 (from .../libxft2_2.3.1-1_i386.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_i386.deb) ...
-Selecting previously unselected package libpango1.0-0:i386.
-Unpacking libpango1.0-0:i386 (from .../libpango1.0-0_1.30.0-1_i386.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_i386.deb) ...
+Selecting previously unselected package libpango-1.0-0:i386.
+Unpacking libpango-1.0-0:i386 (from .../libpango-1.0-0_1.32.5-5+b1_i386.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:i386.
+Unpacking libpangoft2-1.0-0:i386 (from .../libpangoft2-1.0-0_1.32.5-5+b1_i386.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:i386.
+Unpacking libpangocairo-1.0-0:i386 (from .../libpangocairo-1.0-0_1.32.5-5+b1_i386.deb) ...
Selecting previously unselected package libpaper1:i386.
Unpacking libpaper1:i386 (from .../libpaper1_1.1.24+nmu2_i386.deb) ...
Selecting previously unselected package libpcrecpp0:i386.
@@ -273,23 +420,41 @@ Unpacking libsm6:i386 (from .../libsm6_2%3a1.2.1-2_i386.deb) ...
Selecting previously unselected package libjbig0:i386.
Unpacking libjbig0:i386 (from .../libjbig0_2.0-2_i386.deb) ...
Selecting previously unselected package libtiff5:i386.
-Unpacking libtiff5:i386 (from .../libtiff5_4.0.2-6_i386.deb) ...
+Unpacking libtiff5:i386 (from .../libtiff5_4.0.3-1_i386.deb) ...
+Selecting previously unselected package libunistring0:i386.
+Unpacking libunistring0:i386 (from .../libunistring0_0.9.3-5_i386.deb) ...
+Selecting previously unselected package libxft2:i386.
+Unpacking libxft2:i386 (from .../libxft2_2.3.1-1_i386.deb) ...
Selecting previously unselected package libxss1:i386.
Unpacking libxss1:i386 (from .../libxss1_1%3a1.2.2-1_i386.deb) ...
Selecting previously unselected package libxt6:i386.
-Unpacking libxt6:i386 (from .../libxt6_1%3a1.1.3-1_i386.deb) ...
+Unpacking libxt6:i386 (from .../libxt6_1%3a1.1.3-1+deb7u1_i386.deb) ...
+Selecting previously unselected package file.
+Unpacking file (from .../file_1%3a5.14-2_i386.deb) ...
+Selecting previously unselected package gettext-base.
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_i386.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Selecting previously unselected package libgfortran-4.7-dev:i386.
-Unpacking libgfortran-4.7-dev:i386 (from .../libgfortran-4.7-dev_4.7.3-4_i386.deb) ...
-Selecting previously unselected package gfortran-4.7.
-Unpacking gfortran-4.7 (from .../gfortran-4.7_4.7.3-4_i386.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
+Selecting previously unselected package gettext.
+Unpacking gettext (from .../gettext_0.18.3-1_i386.deb) ...
+Selecting previously unselected package intltool-debian.
+Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
+Selecting previously unselected package po-debconf.
+Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
+Selecting previously unselected package debhelper.
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Selecting previously unselected package libgfortran-4.8-dev:i386.
+Unpacking libgfortran-4.8-dev:i386 (from .../libgfortran-4.8-dev_4.8.1-8_i386.deb) ...
+Selecting previously unselected package gfortran-4.8.
+Unpacking gfortran-4.8 (from .../gfortran-4.8_4.8.1-8_i386.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.7.2-1_i386.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.8.1-2_i386.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_i386.deb) ...
Selecting previously unselected package libblas-dev.
Unpacking libblas-dev (from .../libblas-dev_1.2.20110419-5_i386.deb) ...
+Selecting previously unselected package libbz2-dev:i386.
+Unpacking libbz2-dev:i386 (from .../libbz2-dev_1.0.6-4_i386.deb) ...
Selecting previously unselected package libjpeg8-dev:i386.
Unpacking libjpeg8-dev:i386 (from .../libjpeg8-dev_8d-1_i386.deb) ...
Selecting previously unselected package liblapack3.
@@ -297,13 +462,15 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_i386.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_i386.deb) ...
Selecting previously unselected package libtinfo-dev:i386.
-Unpacking libtinfo-dev:i386 (from .../libtinfo-dev_5.9+20130504-1_i386.deb) ...
+Unpacking libtinfo-dev:i386 (from .../libtinfo-dev_5.9+20130608-1_i386.deb) ...
Selecting previously unselected package libncurses5-dev:i386.
-Unpacking libncurses5-dev:i386 (from .../libncurses5-dev_5.9+20130504-1_i386.deb) ...
+Unpacking libncurses5-dev:i386 (from .../libncurses5-dev_5.9+20130608-1_i386.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_i386.deb) ...
Selecting previously unselected package libpcre3-dev:i386.
Unpacking libpcre3-dev:i386 (from .../libpcre3-dev_1%3a8.31-2_i386.deb) ...
+Selecting previously unselected package zlib1g-dev:i386.
+Unpacking zlib1g-dev:i386 (from .../zlib1g-dev_1%3a1.2.8.dfsg-1_i386.deb) ...
Selecting previously unselected package libpng12-dev.
Unpacking libpng12-dev (from .../libpng12-dev_1.2.49-4_i386.deb) ...
Selecting previously unselected package libreadline6-dev:i386.
@@ -317,104 +484,143 @@ Unpacking unzip (from .../archives/unzip_6.0-9_i386.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_i386.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_i386.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_i386.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_i386.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1-1_i386.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_i386.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1-1_all.deb) ...
-Processing triggers for man-db ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libpipeline1:i386 (1.2.4-1) ...
+Setting up libudev0:i386 (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
+Setting up bsdmainutils (9.0.5) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Processing triggers for mime-support ...
+Setting up libasprintf0c2:i386 (0.18.3-1) ...
+Setting up libmagic1:i386 (1:5.14-2) ...
+Setting up libxml2:i386 (2.9.1+dfsg1-2) ...
+Setting up libdrm2:i386 (2.4.45-3) ...
+Setting up libffi6:i386 (3.0.13-4) ...
+Setting up libglapi-mesa:i386 (9.1.4-1) ...
+Setting up libllvm3.2:i386 (1:3.2repack-10) ...
+Setting up libxau6:i386 (1:1.0.8-1) ...
+Setting up libxdmcp6:i386 (1:1.1.1-1) ...
+Setting up libxcb1:i386 (1.9.1-3) ...
+Setting up libxcb-dri2-0:i386 (1.9.1-3) ...
+Setting up libgbm1:i386 (9.1.4-1) ...
+Setting up libwayland-client0:i386 (1.1.0-2) ...
+Setting up libwayland-server0:i386 (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:i386 (2:1.6.0-1) ...
+Setting up libx11-xcb1:i386 (2:1.6.0-1) ...
+Setting up libxcb-render0:i386 (1.9.1-3) ...
+Setting up libxcb-shape0:i386 (1.9.1-3) ...
+Setting up libxcb-xfixes0:i386 (1.9.1-3) ...
+Setting up libegl1-mesa:i386 (9.1.4-1) ...
+Setting up libexpat1:i386 (2.1.0-4) ...
Setting up libfreetype6:i386 (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:i386 (2.9.0-7.1) ...
-Setting up libpixman-1-0:i386 (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:i386 (2.10.2-2) ...
+Setting up libxcb-glx0:i386 (1.9.1-3) ...
+Setting up libxfixes3:i386 (1:5.0.1-1) ...
+Setting up libxdamage1:i386 (1:1.1.4-1) ...
+Setting up libxext6:i386 (2:1.3.2-1) ...
+Setting up libxxf86vm1:i386 (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:i386 (9.1.4-1) ...
+Setting up libpixman-1-0:i386 (0.30.0-3) ...
Setting up libpng12-0:i386 (1.2.49-4) ...
-Setting up libxau6:i386 (1:1.0.7-1) ...
-Setting up libxdmcp6:i386 (1:1.1.1-1) ...
-Setting up libxcb1:i386 (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:i386 (2:1.5.0-1) ...
-Setting up libxcb-render0:i386 (1.8.1-2) ...
-Setting up libxcb-shm0:i386 (1.8.1-2) ...
-Setting up libxext6:i386 (2:1.3.1-2) ...
-Setting up libxrender1:i386 (1:0.9.7-1) ...
-Setting up libcairo2:i386 (1.12.14-4) ...
+Setting up libxcb-shm0:i386 (1.9.1-3) ...
+Setting up libxrender1:i386 (1:0.9.8-1) ...
+Setting up libcairo2:i386 (1.12.14-5) ...
+Setting up libglib2.0-0:i386 (2.36.3-3) ...
+No schema files found: doing nothing.
+Setting up libcroco3:i386 (0.6.8-2) ...
Setting up libdatrie1:i386 (0.2.6-2) ...
-Setting up libgfortran3:i386 (4.8.0-7) ...
+Setting up libgfortran3:i386 (4.8.1-8) ...
+Setting up libgraphite2-3:i386 (1.2.3-1) ...
+Setting up libharfbuzz0a:i386 (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
+update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6:i386 (2:1.0.8-2) ...
Setting up libjpeg8:i386 (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:i386 (0.1.19-2) ...
-Setting up libxft2:i386 (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:i386 (1.30.0-1) ...
+Setting up libpango-1.0-0:i386 (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:i386 (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:i386 (1.32.5-5+b1) ...
Setting up libpaper1:i386 (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:i386 (1:8.31-2) ...
Setting up libsm6:i386 (2:1.2.1-2) ...
Setting up libjbig0:i386 (2.0-2) ...
-Setting up libtiff5:i386 (4.0.2-6) ...
+Setting up libtiff5:i386 (4.0.3-1) ...
+Setting up libunistring0:i386 (0.9.3-5) ...
+Setting up libxft2:i386 (2.3.1-1) ...
Setting up libxss1:i386 (1:1.2.2-1) ...
-Setting up libxt6:i386 (1:1.1.3-1) ...
-Setting up cdbs (0.4.121) ...
-Setting up libgfortran-4.7-dev:i386 (4.7.3-4) ...
-Setting up gfortran-4.7 (4.7.3-4) ...
-Setting up gfortran (4:4.7.2-1) ...
+Setting up libxt6:i386 (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gettext (0.18.3-1) ...
+Setting up intltool-debian (0.35.0+20060710.1) ...
+Setting up po-debconf (1.0.16+nmu2) ...
+Setting up debhelper (9.20130630) ...
+Setting up libgfortran-4.8-dev:i386 (4.8.1-8) ...
+Setting up gfortran-4.8 (4.8.1-8) ...
+Setting up gfortran (4:4.8.1-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
Setting up libblas-dev (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so to provide /usr/lib/libblas.so (libblas.so) in auto mode
+Setting up libbz2-dev:i386 (1.0.6-4) ...
Setting up libjpeg8-dev:i386 (8d-1) ...
Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:i386 (5.9+20130504-1) ...
-Setting up libncurses5-dev:i386 (5.9+20130504-1) ...
+Setting up libtinfo-dev:i386 (5.9+20130608-1) ...
+Setting up libncurses5-dev:i386 (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:i386 (1:8.31-2) ...
+Setting up zlib1g-dev:i386 (1:1.2.8.dfsg-1) ...
Setting up libpng12-dev (1.2.49-4) ...
Setting up libreadline6-dev:i386 (6.2+dfsg-0.1) ...
Setting up libreadline-dev:i386 (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1-1) ...
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
Processing triggers for libc-bin ...
-ldconfig deferred processing now taking place
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- libexpat1-dev libffi5 libmpc2 libncursesw5 libreadline5 libruby1.8
- libruby1.9.1 libsqlite3-0 libssl-dev libssl1.0.0 libyaml-0-2 mime-support
- ruby ruby1.8 ruby1.8-dev ruby1.9.1 ruby1.9.1-dev rubygems
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 16 not upgraded.
-Checking correctness of dependencies...
-Kernel: Linux 2.6.32-5-686-bigmem i386 (i686)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.7_4.7.3-4 gcc-4.6_4.6.4-2 gcc-4.7_4.7.3-4 libc6-dev_2.17-1 libstdc++6_4.8.0-7 libstdc++6-4.7-dev_4.7.3-4 linux-libc-dev_3.8.11-1
-Package versions: apt_0.9.8 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bison_2:2.5.dfsg-3 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.13-3.3 cpp_4:4.7.2-1 cpp-4.6_4.6.4-2 cpp-4.7_4.7.3-4 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130509 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 fil [...]
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: Linux 3.2.0-4-amd64 amd64 (x86_64)
+Toolchain package versions: binutils_2.23.52.20130727-1 dpkg-dev_1.17.1 g++-4.8_4.8.1-8 gcc-4.8_4.8.1-8 libc6-dev_2.17-91 libstdc++-4.8-dev_4.8.1-8 libstdc++6_4.8.1-8 linux-libc-dev_3.10.3-1
+Package versions: apt_0.9.9.4 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130727-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.21-1 cpp_4:4.8.1-2 cpp-4.8_4.8.1-8 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.4 diffutils_1:3.2-8 dpkg_1.17.1 dpkg-dev_1.17.1 e2fslibs_1.42.8-1 e2fsprogs_1.42.8-1 eatmydata_26-2 fakeroot_1.19-2 file_1:5.14-2 finduti [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -424,28 +630,49 @@ Package versions: apt_0.9.8 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 bi
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+DEB_BUILD_OPTIONS=parallel=8
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-i386-sbuild
+SCHROOT_CHROOT_NAME=sid-i386-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-i386-sbuild-ec04878d-719b-49fb-badc-b37d1c9c9389
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+TERM=linux
+USER=buildd
+USERNAME=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+dpkg-buildpackage: source distribution unstable
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture i386
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -461,7 +688,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -480,26 +707,28 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/src'
-gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O2 -pipe -g -c normexp.c -o normexp.o
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
+ double abstol = -1e500; // infinity
+ ^
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -509,13 +738,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -523,7 +752,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -559,9 +788,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
- gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -592,79 +821,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_i386.deb'.
- dpkg-genchanges -B -mi386 Build Daemon (murphy) <buildd_i386-murphy at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_i386.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_i386.deb'.
+ dpkg-genchanges -B -mamd64 / i386 Build Daemon (babin) <buildd-babin at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130516-1543
+Build finished at 20130804-0935
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_i386.changes:
+────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_i386.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: i386
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: i386 Build Daemon (murphy) <buildd_i386-murphy at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: amd64 / i386 Build Daemon (babin) <buildd-babin at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
- .
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- 1f0d9a71df0fe7989536f59646ef75e901d619f4 1614898 r-bioc-limma_3.16.3~dfsg-1_i386.deb
+ 5fcb1f18ea7fa69b7f74dc30fc14bffb3e1f9254 839660 r-bioc-limma_3.16.7~dfsg-1_i386.deb
Checksums-Sha256:
- f837b728716687cbcdce0d566d8056151d88c4795d331db08bd4924e6bd6b6e7 1614898 r-bioc-limma_3.16.3~dfsg-1_i386.deb
+ 3da527b77248ca131f1e29807d810a5bc46bafd7be9c96211f629464643e0d1f 839660 r-bioc-limma_3.16.7~dfsg-1_i386.deb
Files:
- d23148b118d46e71cb7772083abc5eac 1614898 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_i386.deb
+ 501bda8855342a7245905b6aebb82527 839660 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_i386.deb
+r-bioc-limma_3.16.7~dfsg-1_i386.deb
───────────────────────────────────
new debian package, version 2.0.
- size 1614898 bytes: control archive= 1667 bytes.
- 774 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ size 839660 bytes: control archive=1636 bytes.
+ 773 bytes, 16 lines control
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1845
- Depends: libc6 (>= 2.1.3), r-base-core (>= 3.0.1-1)
+ Installed-Size: 991
+ Depends: libc6 (>= 2.1.3), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -676,219 +902,91 @@ r-bioc-limma_3.16.3~dfsg-1_i386.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 10085 2013-05-16 15:42 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2013-05-16 15:42 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 37337 2013-05-16 15:42 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 2046 2013-05-16 15:42 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 963 2013-05-16 15:42 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2013-05-16 15:43 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 7892 2013-05-16 15:43 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 206551 2013-05-16 15:42 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 1056 2013-05-16 15:42 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 4119 2013-05-16 15:42 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 11214 2013-05-16 15:42 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 2567 2013-05-16 15:42 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 494679 2013-05-16 15:42 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 6703 2013-05-16 15:42 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 1405 2013-05-16 15:42 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 3414 2013-05-16 15:42 ./usr/lib/R/site-library/limma/help/limma.rdx
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 673 2013-05-16 15:42 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 45597 2013-05-16 15:42 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 102936 2013-05-16 15:42 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 806089 2013-05-16 15:42 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 1711 2013-05-16 15:42 ./usr/lib/R/site-library/limma/doc/limma.Rnw
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 1064 2013-05-16 15:42 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 219 2013-05-16 15:42 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 541 2013-05-16 15:42 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 6375 2013-05-16 15:42 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 3089 2013-05-16 15:42 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 5944 2013-05-16 15:42 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 985 2013-05-16 15:42 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-16 15:42 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-16 15:43 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
-drwxr-xr-x root/root 0 2013-05-16 15:43 ./usr/share/doc/r-bioc-limma/tests/
--rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 10085 2013-08-04 09:35 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2013-08-04 09:35 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 37564 2013-08-04 09:35 ./usr/lib/R/site-library/limma/html/00Index.html
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 2577 2013-08-04 09:35 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 6742 2013-08-04 09:35 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 3435 2013-08-04 09:35 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 492579 2013-08-04 09:35 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 1392 2013-08-04 09:35 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 11214 2013-08-04 09:35 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 963 2013-08-04 09:35 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 45597 2013-08-04 09:35 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 1711 2013-08-04 09:35 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 673 2013-08-04 09:35 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 104280 2013-08-04 09:35 ./usr/lib/R/site-library/limma/doc/changelog.txt
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 4117 2013-08-04 09:35 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 207869 2013-08-04 09:35 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 1056 2013-08-04 09:35 ./usr/lib/R/site-library/limma/R/limma
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 7852 2013-08-04 09:35 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2013-08-04 09:35 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 542 2013-08-04 09:35 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 219 2013-08-04 09:35 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 3098 2013-08-04 09:35 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 5952 2013-08-04 09:35 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 6386 2013-08-04 09:35 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 1070 2013-08-04 09:35 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 985 2013-08-04 09:35 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 2095 2013-08-04 09:35 ./usr/lib/R/site-library/limma/NAMESPACE
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-i386-sbuild-14df681c-fef9-4ace-84f3-a9c3e59f5bea/build/buildd-r-bioc-limma_3.16.3~dfsg-1-i386-WeUhHx
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- libexpat1-dev libffi5 libmpc2 libncursesw5 libreadline5 libruby1.8
- libruby1.9.1 libsqlite3-0 libssl-dev libssl1.0.0 libyaml-0-2 mime-support
- ruby ruby1.8 ruby1.8-dev ruby1.9.1 ruby1.9.1-dev rubygems
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 16 not upgraded.
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- libexpat1 libexpat1-dev libffi5 libmpc2 libncursesw5 libreadline5 libruby1.8
- libruby1.9.1 libsqlite3-0 libssl-dev libssl1.0.0 libyaml-0-2 mime-support
- ruby ruby1.8 ruby1.8-dev ruby1.9.1 ruby1.9.1-dev rubygems zlib1g-dev
-Use 'apt-get autoremove' to remove them.
-The following packages will be REMOVED:
- cdbs* fontconfig* fontconfig-config* fonts-dejavu-core* gfortran*
- gfortran-4.7* libblas-dev* libblas3* libcairo2* libdatrie1* libfontconfig1*
- libfreetype6* libgfortran-4.7-dev* libgfortran3* libice6* libjbig0*
- libjpeg8* libjpeg8-dev* liblapack-dev* liblapack3* libncurses5-dev*
- libpango1.0-0* libpaper-utils* libpaper1* libpcre3-dev* libpcrecpp0*
- libpixman-1-0* libpng12-0* libpng12-dev* libreadline-dev* libreadline6-dev*
- libsm6* libthai-data* libthai0* libtiff5* libtinfo-dev* libx11-6*
- libx11-data* libxau6* libxcb-render0* libxcb-shm0* libxcb1* libxdmcp6*
- libxext6* libxft2* libxrender1* libxss1* libxt6* r-base-core* r-base-dev*
- tcl8.5* tk8.5* ttf-dejavu-core* ucf* unzip* x11-common* xdg-utils* zip*
-0 upgraded, 0 newly installed, 58 to remove and 16 not upgraded.
-After this operation, 96.3 MB disk space will be freed.
-(Reading database ... 18712 files and directories currently installed.)
-Removing r-base-dev ...
-Removing cdbs ...
-Removing r-base-core ...
-Purging configuration files for r-base-core ...
-Removing libpango1.0-0:i386 ...
-Purging configuration files for libpango1.0-0:i386 ...
-Removing fontconfig ...
-Purging configuration files for fontconfig ...
-Removing tk8.5 ...
-Purging configuration files for tk8.5 ...
-Removing libxft2:i386 ...
-Purging configuration files for libxft2:i386 ...
-Removing libcairo2:i386 ...
-Purging configuration files for libcairo2:i386 ...
-Removing libfontconfig1:i386 ...
-Purging configuration files for libfontconfig1:i386 ...
-Removing fontconfig-config ...
-Purging configuration files for fontconfig-config ...
-Removing ttf-dejavu-core ...
-Removing fonts-dejavu-core ...
-Purging configuration files for fonts-dejavu-core ...
-Removing gfortran ...
-Removing gfortran-4.7 ...
-Removing liblapack-dev ...
-Removing libblas-dev ...
-Removing liblapack3 ...
-Removing libblas3 ...
-Removing libthai0:i386 ...
-Purging configuration files for libthai0:i386 ...
-Removing libdatrie1:i386 ...
-Purging configuration files for libdatrie1:i386 ...
-Removing libfreetype6:i386 ...
-Purging configuration files for libfreetype6:i386 ...
-Removing libgfortran-4.7-dev:i386 ...
-Removing libgfortran3:i386 ...
-Purging configuration files for libgfortran3:i386 ...
-Removing libxt6:i386 ...
-Purging configuration files for libxt6:i386 ...
-Removing libsm6:i386 ...
-Purging configuration files for libsm6:i386 ...
-Removing libice6:i386 ...
-Purging configuration files for libice6:i386 ...
-Removing libtiff5:i386 ...
-Purging configuration files for libtiff5:i386 ...
-Removing libjbig0:i386 ...
-Purging configuration files for libjbig0:i386 ...
-Removing libjpeg8-dev:i386 ...
-Removing libjpeg8:i386 ...
-Removing libncurses5-dev:i386 ...
-Removing libpaper-utils ...
-Removing libpaper1:i386 ...
-Purging configuration files for libpaper1:i386 ...
-Removing libpcre3-dev:i386 ...
-Removing libpcrecpp0:i386 ...
-Purging configuration files for libpcrecpp0:i386 ...
-Removing libpixman-1-0:i386 ...
-Purging configuration files for libpixman-1-0:i386 ...
-Removing libpng12-dev ...
-Removing libpng12-0:i386 ...
-Purging configuration files for libpng12-0:i386 ...
-Removing libreadline-dev:i386 ...
-Removing libreadline6-dev:i386 ...
-Removing libthai-data ...
-Removing libtinfo-dev:i386 ...
-Removing libxss1:i386 ...
-Purging configuration files for libxss1:i386 ...
-Removing libxrender1:i386 ...
-Purging configuration files for libxrender1:i386 ...
-Removing libxext6:i386 ...
-Purging configuration files for libxext6:i386 ...
-Removing libx11-6:i386 ...
-Purging configuration files for libx11-6:i386 ...
-Removing libx11-data ...
-Removing libxcb-shm0:i386 ...
-Purging configuration files for libxcb-shm0:i386 ...
-Removing libxcb-render0:i386 ...
-Purging configuration files for libxcb-render0:i386 ...
-Removing libxcb1:i386 ...
-Purging configuration files for libxcb1:i386 ...
-Removing libxau6:i386 ...
-Purging configuration files for libxau6:i386 ...
-Removing libxdmcp6:i386 ...
-Purging configuration files for libxdmcp6:i386 ...
-Removing tcl8.5 ...
-Purging configuration files for tcl8.5 ...
-Removing ucf ...
-Purging configuration files for ucf ...
-Removing unzip ...
-Purging configuration files for unzip ...
-Removing x11-common ...
-All runlevel operations denied by policy
-invoke-rc.d: policy-rc.d denied execution of stop.
-Purging configuration files for x11-common ...
-Removing xdg-utils ...
-Removing zip ...
-Processing triggers for man-db ...
-Not building database; man-db/auto-update is not 'true'.
-Processing triggers for mime-support ...
-Processing triggers for libc-bin ...
-ldconfig deferred processing now taking place
+Purging /«BUILDDIR»
+Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: i386
-Build-Space: 5880
-Build-Time: 19
+Build Architecture: i386
+Build-Space: 3404
+Build-Time: 14
Distribution: sid
-Install-Time: 83
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: i386
+Install-Time: 31
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: amd64
Package: r-bioc-limma
-Package-Time: 115
-Source-Version: 3.16.3~dfsg-1
-Space: 5880
+Package-Time: 74
+Source-Version: 3.16.7~dfsg-1
+Space: 3404
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130516-1543
-Build needed 00:01:55, 5880k disc space
-Signature with key '76D9491D' requested:
+Finished at 20130804-0935
+Build needed 00:01:14, 3404k disc space
+Signature with key '104A62ED' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_i386.changes 104A62ED
+
+Successfully signed changes file
diff --git a/ia64.log b/ia64.log
index d5fa23c..f6f6656 100644
--- a/ia64.log
+++ b/ia64.log
@@ -1,65 +1,75 @@
-From buildd at alkman.debian.org Fri May 17 13:55:25 2013
+From buildd at alkman.debian.org Sun Aug 04 10:03:03 2013
Return-path: <buildd at alkman.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+Received: from muffat.debian.org ([206.12.19.146])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
- by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ CN=muffat.debian.org, EMAIL=hostmaster at muffat.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
(Exim 4.72) (envelope-from <buildd at alkman.debian.org>)
- id 1UdL7r-0004Io-6r
- for logs at buildd.debian.org; Fri, 17 May 2013 13:55:18 +0000
+ id 1V5v9S-0004aF-ID
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:03:02 +0000
Received: from alkman.debian.org ([192.25.206.63])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=alkman.debian.org, EMAIL=hostmaster at alkman.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at alkman.debian.org>)
- id 1UdL7p-0005N1-L7
- for logs at buildd.debian.org; Fri, 17 May 2013 13:55:14 +0000
-Received: from buildd by alkman.debian.org with local (Exim 4.72)
+ by muffat.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
+ (Exim 4.80) (envelope-from <buildd at alkman.debian.org>)
+ id 1V5v9P-0002MR-TM
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:03:00 +0000
+Received: from buildd by alkman.debian.org with local (Exim 4.80)
(envelope-from <buildd at alkman.debian.org>)
- id 1UdL7n-0004Mk-GB; Fri, 17 May 2013 13:55:11 +0000
-Date: Fri, 17 May 2013 13:55:11 +0000
-Message-Id: <E1UdL7n-0004Mk-GB at alkman.debian.org>
+ id 1V5v9N-0001mn-LM; Sun, 04 Aug 2013 10:02:57 +0000
+Content-Transfer-Encoding: binary
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 10:02:57 +0000
From: buildd on alkman <buildd at alkman.debian.org>
To: buildd-porters at alkman.debian.org,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on ia64
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on ia64
(dist=sid)
-Content-Type: text/plain; charset=UTF-8
-Content-Transfer-Encoding: 8bit
+Key-Id: 7913FDBB
+Message-Id: <E1V5v9N-0001mn-LM at alkman.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on alkman.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on alkman.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (ia64) 17 May 2013 13:49 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (ia64) 04 Aug 2013 10:00 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: ia64
-Get:1 http://spohr.debian.org unstable Release.gpg [1571 B]
-Get:2 http://spohr.debian.org unstable Release [203 kB]
-Get:3 http://spohr.debian.org unstable/main Sources [6729 kB]
-Get:4 http://incoming.debian.org unstable Release.gpg [1571 B]
-Get:5 http://incoming.debian.org buildd-unstable Release.gpg [1571 B]
-Get:6 http://incoming.debian.org unstable Release [203 kB]
-Get:7 http://spohr.debian.org unstable/contrib Sources [53.7 kB]
-Get:8 http://spohr.debian.org unstable/non-free Sources [103 kB]
-Get:9 http://spohr.debian.org unstable/main ia64 Packages [6080 kB]
-Get:10 http://incoming.debian.org buildd-unstable Release [109 kB]
-Get:11 http://spohr.debian.org unstable/contrib ia64 Packages [37.7 kB]
-Get:12 http://incoming.debian.org unstable/main Sources [6729 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:15 http://incoming.debian.org unstable/main ia64 Packages [6080 kB]
-Get:16 http://incoming.debian.org unstable/contrib ia64 Packages [37.7 kB]
-Get:17 http://incoming.debian.org buildd-unstable/main Sources [104 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib Sources [873 B]
-Get:19 http://incoming.debian.org buildd-unstable/non-free Sources [2683 B]
-Get:20 http://incoming.debian.org buildd-unstable/main ia64 Packages [65.6 kB]
-Get:21 http://incoming.debian.org buildd-unstable/contrib ia64 Packages [14 B]
-Fetched 26.7 MB in 28s (922 kB/s)
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: ia64
+Host Architecture: ia64
+Build Architecture: ia64
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-etMvJ7/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-etMvJ7' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-ia64-sbuild-60e3e077-c373-41d8-856e-db11d1d2b572' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://spohr.debian.org unstable InRelease [204 kB]
+Get:2 http://spohr.debian.org unstable/main Sources [6890 kB]
+Get:3 http://incoming.debian.org unstable InRelease [204 kB]
+Get:4 http://spohr.debian.org unstable/contrib Sources [55.4 kB]
+Get:5 http://spohr.debian.org unstable/non-free Sources [105 kB]
+Get:6 http://spohr.debian.org unstable/main ia64 Packages [6117 kB]
+Get:7 http://incoming.debian.org buildd-unstable InRelease [111 kB]
+Get:8 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:9 http://spohr.debian.org unstable/contrib ia64 Packages [38.2 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:12 http://incoming.debian.org unstable/main ia64 Packages [6117 kB]
+Get:13 http://incoming.debian.org unstable/contrib ia64 Packages [38.2 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [101 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2795 B]
+Get:17 http://incoming.debian.org buildd-unstable/main ia64 Packages [70.9 kB]
+Get:18 http://incoming.debian.org buildd-unstable/contrib ia64 Packages [14 B]
+Fetched 27.1 MB in 27s (973 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -79,338 +89,367 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://spohr.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://spohr.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://spohr.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 0s (7330 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 0s (378 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-hsjzpD/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: already installed (1.18.4-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 46 not upgraded.
-Removing negative dependencies:
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 62 not upgraded.
+Need to get 0 B/712 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 10862 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6.1-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6.1-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-hwaqv4/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 46 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6.1-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.1)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-0.1)
-bsdutils: already installed (1:2.20.1-5.3)
-coreutils: already installed (8.13-3.2)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.13-38)
-login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.3)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-20)
-sed: already installed (4.2.1-10)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-0.1)
-util-linux: already installed (2.20.1-5.3)
-libc6.1-dev: already installed (2.13-38)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130516
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libmpc2
-Use 'apt-get autoremove' to remove it.
The following extra packages will be installed:
- bsdmainutils cpp-4.6 file fontconfig fontconfig-config fonts-dejavu-core
- g++-4.6 gcc-4.6 gcc-4.6-base gcc-4.8-base gettext gettext-base gfortran
- gfortran-4.6 groff-base html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6.1
- libc6.1-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1
- libfreetype6 libgettextpo-dev libgettextpo0 libgfortran3 libglib2.0-0
- libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1
- libmpc3 libncurses5 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1
- libpcre3 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
- libpng12-dev libreadline-dev libreadline6-dev libsm6 libstdc++6-4.6-dev
- libthai-data libthai0 libtiff5 libtinfo-dev libtinfo5 libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
- r-base-core tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
- zlib1g zlib1g-dev
+ bsdmainutils cdbs cpp cpp-4.6 debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core g++-4.6 gcc gcc-4.6 gcc-4.6-base gcc-4.8-base gettext
+ gettext-base gfortran gfortran-4.6 groff-base intltool-debian libasprintf0c2
+ libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libdrm2
+ libegl1-mesa libexpat1 libffi6 libfontconfig1 libfreetype6 libgbm1 libgcc1
+ libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgomp1
+ libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5 libncurses5-dev
+ libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
+ libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
+ libpng12-dev libquadmath0 libreadline-dev libreadline6-dev libsm6 libstdc++6
+ libstdc++6-4.6-dev libthai-data libthai0 libtiff5 libtinfo-dev libtinfo5
+ libudev0 libunistring0 libwayland-client0 libwayland-server0 libx11-6
+ libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0 libxcb-render0
+ libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6
+ libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6 libxxf86vm1
+ man-db ncurses-bin po-debconf r-base-core r-base-dev tcl8.5 tk8.5
+ ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make
- gcc-4.6-doc libstdc++6-4.6-dbg libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg
- libquadmath0-dbg libmudflap0-dbg libcloog-ppl0 libppl-c2 libppl7 gettext-doc
- gfortran-doc gfortran-4.6-doc libgfortran3-dbg groff glibc-doc ncurses-doc
- ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
- r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib manpages-dev autoconf
+ automake1.9 libtool flex bison gdb gcc-doc libmudflap0-4.6-dev libgcc1-dbg
+ libgomp1-dbg libquadmath0-dbg libmudflap0-dbg libcloog-ppl1 libcloog-ppl0
+ libppl-c4 libppl12 libppl9 gettext-doc gfortran-doc gfortran-4.6-doc
+ libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
+ ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp
+ libstdc++6-4.6-doc less www-browser libmail-box-perl r-doc-info r-doc-pdf
+ r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint manpages-dev libglib2.0-data
- shared-mime-info libgpm2 xml-core libmail-sendmail-perl r-recommended
- r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ libgpm2 xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
- fonts-dejavu-core gcc-4.8-base gettext gettext-base gfortran gfortran-4.6
- groff-base html2text intltool-debian libasprintf-dev libasprintf0c2
- libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi6 libfontconfig1 libfreetype6 libgettextpo-dev libgettextpo0
- libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
- zlib1g-dev
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.6 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0
+ libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
+ libtinfo-dev libudev0 libunistring0 libwayland-client0 libwayland-server0
+ libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0
+ libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1
+ libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6
+ libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-dev-bin libc6.1 libc6.1-dev
- libncurses5 libstdc++6-4.6-dev libtinfo5 ncurses-bin zlib1g
-12 upgraded, 84 newly installed, 0 to remove and 34 not upgraded.
-Need to get 103 MB/103 MB of archives.
-After this operation, 182 MB of additional disk space will be used.
-Get:1 http://spohr.debian.org/debian/ unstable/main libc6.1-dev ia64 2.17-3 [3398 kB]
-Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libcroco3 ia64 0.6.8-2 [143 kB]
-Get:3 http://spohr.debian.org/debian/ unstable/main libc-dev-bin ia64 2.17-3 [262 kB]
-Get:4 http://spohr.debian.org/debian/ unstable/main libc6.1 ia64 2.17-3 [4777 kB]
-Get:5 http://spohr.debian.org/debian/ unstable/main libtinfo5 ia64 5.9+20130504-1 [323 kB]
-Get:6 http://spohr.debian.org/debian/ unstable/main libncurses5 ia64 5.9+20130504-1 [167 kB]
-Get:7 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-base-core ia64 3.0.1-1 [22.7 MB]
-Get:8 http://spohr.debian.org/debian/ unstable/main ncurses-bin ia64 5.9+20130504-1 [386 kB]
-Get:9 http://spohr.debian.org/debian/ unstable/main zlib1g ia64 1:1.2.8.dfsg-1 [119 kB]
-Get:10 http://spohr.debian.org/debian/ unstable/main libpipeline1 ia64 1.2.3-1 [49.3 kB]
-Get:11 http://spohr.debian.org/debian/ unstable/main groff-base ia64 1.22.2-2 [831 kB]
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base gcc-4.8-base libgcc1 libgomp1
+ libncurses5 libquadmath0 libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin
+15 upgraded, 98 newly installed, 0 to remove and 47 not upgraded.
+Need to get 97.1 MB/97.1 MB of archives.
+After this operation, 189 MB of additional disk space will be used.
+Get:1 http://spohr.debian.org/debian/ unstable/main ncurses-bin ia64 5.9+20130608-1 [391 kB]
+Get:2 http://spohr.debian.org/debian/ unstable/main libgomp1 ia64 4.8.1-8 [38.3 kB]
+Get:3 http://spohr.debian.org/debian/ unstable/main gcc-4.8-base ia64 4.8.1-8 [150 kB]
+Get:4 http://spohr.debian.org/debian/ unstable/main libstdc++6 ia64 4.8.1-8 [430 kB]
+Get:5 http://spohr.debian.org/debian/ unstable/main libquadmath0 ia64 4.8.1-8 [187 kB]
+Get:6 http://spohr.debian.org/debian/ unstable/main libgcc1 ia64 1:4.8.1-8 [46.7 kB]
+Get:7 http://spohr.debian.org/debian/ unstable/main libtinfo5 ia64 5.9+20130608-1 [325 kB]
+Get:8 http://spohr.debian.org/debian/ unstable/main libncurses5 ia64 5.9+20130608-1 [167 kB]
+Get:9 http://spohr.debian.org/debian/ unstable/main libpipeline1 ia64 1.2.4-1 [50.6 kB]
+Get:10 http://spohr.debian.org/debian/ unstable/main libudev0 ia64 175-7.2 [137 kB]
+Get:11 http://spohr.debian.org/debian/ unstable/main groff-base ia64 1.22.2-3 [832 kB]
Get:12 http://spohr.debian.org/debian/ unstable/main bsdmainutils ia64 9.0.5 [242 kB]
-Get:13 http://spohr.debian.org/debian/ unstable/main man-db ia64 2.6.3-6 [924 kB]
-Get:14 http://spohr.debian.org/debian/ unstable/main libasprintf0c2 ia64 0.18.1.1-10 [27.7 kB]
-Get:15 http://spohr.debian.org/debian/ unstable/main libmagic1 ia64 1:5.14-1 [235 kB]
-Get:16 http://spohr.debian.org/debian/ unstable/main libpcre3 ia64 1:8.31-2 [300 kB]
-Get:17 http://spohr.debian.org/debian/ unstable/main libxml2 ia64 2.8.0+dfsg1-7+nmu1 [1184 kB]
-Get:18 http://spohr.debian.org/debian/ unstable/main libexpat1 ia64 2.1.0-3 [215 kB]
-Get:19 http://spohr.debian.org/debian/ unstable/main libfreetype6 ia64 2.4.9-1.1 [627 kB]
-Get:20 http://spohr.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:21 http://spohr.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:22 http://spohr.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:23 http://spohr.debian.org/debian/ unstable/main libfontconfig1 ia64 2.9.0-7.1 [336 kB]
-Get:24 http://spohr.debian.org/debian/ unstable/main libpixman-1-0 ia64 0.26.0-4 [452 kB]
-Get:25 http://spohr.debian.org/debian/ unstable/main libpng12-0 ia64 1.2.49-4 [222 kB]
-Get:26 http://spohr.debian.org/debian/ unstable/main libxau6 ia64 1:1.0.7-1 [20.1 kB]
-Get:27 http://spohr.debian.org/debian/ unstable/main libxdmcp6 ia64 1:1.1.1-1 [29.1 kB]
-Get:28 http://spohr.debian.org/debian/ unstable/main libxcb1 ia64 1.8.1-2 [56.3 kB]
-Get:29 http://spohr.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:30 http://spohr.debian.org/debian/ unstable/main libx11-6 ia64 2:1.5.0-1 [1079 kB]
-Get:31 http://spohr.debian.org/debian/ unstable/main libxcb-render0 ia64 1.8.1-2 [19.8 kB]
-Get:32 http://spohr.debian.org/debian/ unstable/main libxcb-shm0 ia64 1.8.1-2 [11.1 kB]
-Get:33 http://spohr.debian.org/debian/ unstable/main libxext6 ia64 2:1.3.1-2 [71.0 kB]
-Get:34 http://spohr.debian.org/debian/ unstable/main libxrender1 ia64 1:0.9.7-1 [40.4 kB]
-Get:35 http://spohr.debian.org/debian/ unstable/main libcairo2 ia64 1.12.14-4 [1309 kB]
-Get:36 http://spohr.debian.org/debian/ unstable/main libffi6 ia64 3.0.13-4 [28.4 kB]
-Get:37 http://spohr.debian.org/debian/ unstable/main libglib2.0-0 ia64 2.36.1-2build1 [2169 kB]
-Get:38 http://spohr.debian.org/debian/ unstable/main libdatrie1 ia64 0.2.6-2 [33.1 kB]
-Get:39 http://spohr.debian.org/debian/ unstable/main libunistring0 ia64 0.9.3-5 [463 kB]
-Get:40 http://spohr.debian.org/debian/ unstable/main libgettextpo0 ia64 0.18.1.1-10 [206 kB]
-Get:41 http://spohr.debian.org/debian/ unstable/main gcc-4.8-base ia64 4.8.0-7 [148 kB]
-Get:42 http://spohr.debian.org/debian/ unstable/main libgfortran3 ia64 4.8.0-7 [474 kB]
-Get:43 http://spohr.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:44 http://spohr.debian.org/debian/ unstable/main libice6 ia64 2:1.0.8-2 [82.2 kB]
-Get:45 http://spohr.debian.org/debian/ unstable/main libjpeg8 ia64 8d-1 [244 kB]
-Get:46 http://spohr.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:47 http://spohr.debian.org/debian/ unstable/main libthai0 ia64 0.1.19-2 [46.4 kB]
-Get:48 http://spohr.debian.org/debian/ unstable/main libxft2 ia64 2.3.1-1 [80.7 kB]
-Get:49 http://spohr.debian.org/debian/ unstable/main fontconfig ia64 2.9.0-7.1 [352 kB]
-Get:50 http://spohr.debian.org/debian/ unstable/main libpango1.0-0 ia64 1.30.0-1 [581 kB]
-Get:51 http://spohr.debian.org/debian/ unstable/main libpaper1 ia64 1.1.24+nmu2 [23.1 kB]
-Get:52 http://spohr.debian.org/debian/ unstable/main libpcrecpp0 ia64 1:8.31-2 [131 kB]
-Get:53 http://spohr.debian.org/debian/ unstable/main libsm6 ia64 2:1.2.1-2 [40.9 kB]
-Get:54 http://spohr.debian.org/debian/ unstable/main libjbig0 ia64 2.0-2 [47.6 kB]
-Get:55 http://spohr.debian.org/debian/ unstable/main libtiff5 ia64 4.0.2-6 [318 kB]
-Get:56 http://spohr.debian.org/debian/ unstable/main libxss1 ia64 1:1.2.2-1 [19.1 kB]
-Get:57 http://spohr.debian.org/debian/ unstable/main libxt6 ia64 1:1.1.3-1 [288 kB]
-Get:58 http://spohr.debian.org/debian/ unstable/main libmpc3 ia64 1.0.1-1 [62.3 kB]
-Get:59 http://spohr.debian.org/debian/ unstable/main file ia64 1:5.14-1 [55.9 kB]
-Get:60 http://spohr.debian.org/debian/ unstable/main gettext-base ia64 0.18.1.1-10 [173 kB]
-Get:61 http://spohr.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:62 http://spohr.debian.org/debian/ unstable/main libstdc++6-4.6-dev ia64 4.6.4-2 [1870 kB]
-Get:63 http://spohr.debian.org/debian/ unstable/main g++-4.6 ia64 4.6.4-2 [7062 kB]
-Get:64 http://spohr.debian.org/debian/ unstable/main gcc-4.6 ia64 4.6.4-2 [6193 kB]
-Get:65 http://spohr.debian.org/debian/ unstable/main cpp-4.6 ia64 4.6.4-2 [5908 kB]
-Get:66 http://spohr.debian.org/debian/ unstable/main gcc-4.6-base ia64 4.6.4-2 [143 kB]
-Get:67 http://spohr.debian.org/debian/ unstable/main html2text ia64 1.3.2a-15 [134 kB]
-Get:68 http://spohr.debian.org/debian/ unstable/main libasprintf-dev ia64 0.18.1.1-10 [27.4 kB]
-Get:69 http://spohr.debian.org/debian/ unstable/main libgettextpo-dev ia64 0.18.1.1-10 [256 kB]
-Get:70 http://spohr.debian.org/debian/ unstable/main gettext ia64 0.18.1.1-10 [2033 kB]
-Get:71 http://spohr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:72 http://spohr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:73 http://spohr.debian.org/debian/ unstable/main debhelper all 9.20130516 [708 kB]
-Get:74 http://spohr.debian.org/debian/ unstable/main gfortran-4.6 ia64 4.6.4-2 [6995 kB]
-Get:75 http://spohr.debian.org/debian/ unstable/main gfortran ia64 4:4.6.3-8 [1124 B]
-Get:76 http://spohr.debian.org/debian/ unstable/main libblas3 ia64 1.2.20110419-5 [335 kB]
-Get:77 http://spohr.debian.org/debian/ unstable/main libblas-dev ia64 1.2.20110419-5 [367 kB]
-Get:78 http://spohr.debian.org/debian/ unstable/main libbz2-dev ia64 1.0.6-4 [51.7 kB]
-Get:79 http://spohr.debian.org/debian/ unstable/main libjpeg8-dev ia64 8d-1 [355 kB]
-Get:80 http://spohr.debian.org/debian/ unstable/main liblapack3 ia64 3.4.2+dfsg-1 [7550 kB]
-Get:81 http://spohr.debian.org/debian/ unstable/main liblapack-dev ia64 3.4.2+dfsg-1 [8319 kB]
-Get:82 http://spohr.debian.org/debian/ unstable/main libtinfo-dev ia64 5.9+20130504-1 [140 kB]
-Get:83 http://spohr.debian.org/debian/ unstable/main libncurses5-dev ia64 5.9+20130504-1 [299 kB]
-Get:84 http://spohr.debian.org/debian/ unstable/main libpaper-utils ia64 1.1.24+nmu2 [19.6 kB]
-Get:85 http://spohr.debian.org/debian/ unstable/main libpcre3-dev ia64 1:8.31-2 [414 kB]
-Get:86 http://spohr.debian.org/debian/ unstable/main zlib1g-dev ia64 1:1.2.8.dfsg-1 [253 kB]
-Get:87 http://spohr.debian.org/debian/ unstable/main libpng12-dev ia64 1.2.49-4 [306 kB]
-Get:88 http://spohr.debian.org/debian/ unstable/main libreadline6-dev ia64 6.2+dfsg-0.1 [265 kB]
-Get:89 http://spohr.debian.org/debian/ unstable/main libreadline-dev ia64 6.2+dfsg-0.1 [896 B]
-Get:90 http://spohr.debian.org/debian/ unstable/main zip ia64 3.0-7 [443 kB]
-Get:91 http://spohr.debian.org/debian/ unstable/main unzip ia64 6.0-9 [266 kB]
-Get:92 http://spohr.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:93 http://spohr.debian.org/debian/ unstable/main tcl8.5 ia64 8.5.11-2 [1906 kB]
-Get:94 http://spohr.debian.org/debian/ unstable/main tk8.5 ia64 8.5.11-2 [1516 kB]
-Get:95 http://spohr.debian.org/debian/ unstable/main r-base-dev all 3.0.1~20130512-1 [3910 B]
+Get:13 http://spohr.debian.org/debian/ unstable/main man-db ia64 2.6.5-2 [1005 kB]
+Get:14 http://spohr.debian.org/debian/ unstable/main libasprintf0c2 ia64 0.18.3-1 [30.4 kB]
+Get:15 http://spohr.debian.org/debian/ unstable/main libmagic1 ia64 1:5.14-2 [235 kB]
+Get:16 http://spohr.debian.org/debian/ unstable/main libxml2 ia64 2.9.1+dfsg1-2 [1205 kB]
+Get:17 http://spohr.debian.org/debian/ unstable/main libdrm2 ia64 2.4.45-3 [476 kB]
+Get:18 http://spohr.debian.org/debian/ unstable/main libglapi-mesa ia64 9.1.4-1 [63.6 kB]
+Get:19 http://spohr.debian.org/debian/ unstable/main libxau6 ia64 1:1.0.8-1 [22.1 kB]
+Get:20 http://spohr.debian.org/debian/ unstable/main libxdmcp6 ia64 1:1.1.1-1 [29.1 kB]
+Get:21 http://spohr.debian.org/debian/ unstable/main libxcb1 ia64 1.9.1-3 [57.1 kB]
+Get:22 http://spohr.debian.org/debian/ unstable/main libxcb-dri2-0 ia64 1.9.1-3 [13.7 kB]
+Get:23 http://spohr.debian.org/debian/ unstable/main libgbm1 ia64 9.1.4-1 [496 kB]
+Get:24 http://spohr.debian.org/debian/ unstable/main libffi6 ia64 3.0.13-4 [28.4 kB]
+Get:25 http://spohr.debian.org/debian/ unstable/main libwayland-client0 ia64 1.1.0-2 [28.1 kB]
+Get:26 http://spohr.debian.org/debian/ unstable/main libwayland-server0 ia64 1.1.0-2 [41.7 kB]
+Get:27 http://spohr.debian.org/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:28 http://spohr.debian.org/debian/ unstable/main libx11-6 ia64 2:1.6.0-1 [1095 kB]
+Get:29 http://spohr.debian.org/debian/ unstable/main libx11-xcb1 ia64 2:1.6.0-1 [154 kB]
+Get:30 http://spohr.debian.org/debian/ unstable/main libxcb-render0 ia64 1.9.1-3 [20.3 kB]
+Get:31 http://spohr.debian.org/debian/ unstable/main libxcb-shape0 ia64 1.9.1-3 [12.2 kB]
+Get:32 http://spohr.debian.org/debian/ unstable/main libxcb-xfixes0 ia64 1.9.1-3 [15.9 kB]
+Get:33 http://spohr.debian.org/debian/ unstable/main libegl1-mesa ia64 9.1.4-1 [95.4 kB]
+Get:34 http://spohr.debian.org/debian/ unstable/main libexpat1 ia64 2.1.0-4 [215 kB]
+Get:35 http://spohr.debian.org/debian/ unstable/main libfreetype6 ia64 2.4.9-1.1 [627 kB]
+Get:36 http://spohr.debian.org/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:37 http://spohr.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:38 http://spohr.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:39 http://spohr.debian.org/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:40 http://spohr.debian.org/debian/ unstable/main libfontconfig1 ia64 2.10.2-2 [360 kB]
+Get:41 http://spohr.debian.org/debian/ unstable/main libxcb-glx0 ia64 1.9.1-3 [31.6 kB]
+Get:42 http://spohr.debian.org/debian/ unstable/main libxfixes3 ia64 1:5.0.1-1 [25.5 kB]
+Get:43 http://spohr.debian.org/debian/ unstable/main libxdamage1 ia64 1:1.1.4-1 [16.9 kB]
+Get:44 http://spohr.debian.org/debian/ unstable/main libxext6 ia64 2:1.3.2-1 [67.1 kB]
+Get:45 http://spohr.debian.org/debian/ unstable/main libxxf86vm1 ia64 1:1.1.2-1+deb7u1 [24.7 kB]
+Get:46 http://spohr.debian.org/debian/ unstable/main libgl1-mesa-glx ia64 9.1.4-1 [177 kB]
+Get:47 http://spohr.debian.org/debian/ unstable/main libpixman-1-0 ia64 0.30.0-3 [524 kB]
+Get:48 http://spohr.debian.org/debian/ unstable/main libpng12-0 ia64 1.2.49-4 [222 kB]
+Get:49 http://spohr.debian.org/debian/ unstable/main libxcb-shm0 ia64 1.9.1-3 [11.6 kB]
+Get:50 http://spohr.debian.org/debian/ unstable/main libxrender1 ia64 1:0.9.8-1 [41.6 kB]
+Get:51 http://spohr.debian.org/debian/ unstable/main libcairo2 ia64 1.12.14-5 [1366 kB]
+Get:52 http://spohr.debian.org/debian/ unstable/main libglib2.0-0 ia64 2.36.3-3 [2177 kB]
+Get:53 http://spohr.debian.org/debian/ unstable/main libcroco3 ia64 0.6.8-2 [143 kB]
+Get:54 http://spohr.debian.org/debian/ unstable/main libdatrie1 ia64 0.2.6-2 [33.1 kB]
+Get:55 http://spohr.debian.org/debian/ unstable/main libgfortran3 ia64 4.8.1-8 [469 kB]
+Get:56 http://spohr.debian.org/debian/ unstable/main libgraphite2-3 ia64 1.2.3-1 [91.7 kB]
+Get:57 http://spohr.debian.org/debian/ unstable/main libharfbuzz0a ia64 0.9.19-1 [520 kB]
+Get:58 http://spohr.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:59 http://spohr.debian.org/debian/ unstable/main libice6 ia64 2:1.0.8-2 [82.2 kB]
+Get:60 http://spohr.debian.org/debian/ unstable/main libjpeg8 ia64 8d-1 [244 kB]
+Get:61 http://spohr.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:62 http://spohr.debian.org/debian/ unstable/main libthai0 ia64 0.1.19-2 [46.4 kB]
+Get:63 http://spohr.debian.org/debian/ unstable/main fontconfig ia64 2.10.2-2 [382 kB]
+Get:64 http://spohr.debian.org/debian/ unstable/main libpango-1.0-0 ia64 1.32.5-5+b1 [290 kB]
+Get:65 http://spohr.debian.org/debian/ unstable/main libpangoft2-1.0-0 ia64 1.32.5-5+b1 [195 kB]
+Get:66 http://spohr.debian.org/debian/ unstable/main libpangocairo-1.0-0 ia64 1.32.5-5+b1 [180 kB]
+Get:67 http://spohr.debian.org/debian/ unstable/main libpaper1 ia64 1.1.24+nmu2 [23.1 kB]
+Get:68 http://spohr.debian.org/debian/ unstable/main libpcrecpp0 ia64 1:8.31-2 [131 kB]
+Get:69 http://spohr.debian.org/debian/ unstable/main libsm6 ia64 2:1.2.1-2 [40.9 kB]
+Get:70 http://spohr.debian.org/debian/ unstable/main libjbig0 ia64 2.0-2 [47.6 kB]
+Get:71 http://spohr.debian.org/debian/ unstable/main libtiff5 ia64 4.0.3-1 [320 kB]
+Get:72 http://spohr.debian.org/debian/ unstable/main libunistring0 ia64 0.9.3-5 [463 kB]
+Get:73 http://spohr.debian.org/debian/ unstable/main libxft2 ia64 2.3.1-1 [80.7 kB]
+Get:74 http://spohr.debian.org/debian/ unstable/main libxss1 ia64 1:1.2.2-1 [19.1 kB]
+Get:75 http://spohr.debian.org/debian/ unstable/main libxt6 ia64 1:1.1.3-1+deb7u1 [288 kB]
+Get:76 http://spohr.debian.org/debian/ unstable/main file ia64 1:5.14-2 [55.9 kB]
+Get:77 http://spohr.debian.org/debian/ unstable/main gettext-base ia64 0.18.3-1 [179 kB]
+Get:78 http://spohr.debian.org/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:79 http://spohr.debian.org/debian/ unstable/main libstdc++6-4.6-dev ia64 4.6.4-4 [1832 kB]
+Get:80 http://spohr.debian.org/debian/ unstable/main g++-4.6 ia64 4.6.4-4 [7034 kB]
+Get:81 http://spohr.debian.org/debian/ unstable/main gcc-4.6 ia64 4.6.4-4 [6169 kB]
+Get:82 http://spohr.debian.org/debian/ unstable/main cpp-4.6 ia64 4.6.4-4 [5883 kB]
+Get:83 http://spohr.debian.org/debian/ unstable/main gcc-4.6-base ia64 4.6.4-4 [142 kB]
+Get:84 http://spohr.debian.org/debian/ unstable/main cpp ia64 4:4.6.4-2 [16.9 kB]
+Get:85 http://spohr.debian.org/debian/ unstable/main gettext ia64 0.18.3-1 [2106 kB]
+Get:86 http://spohr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:87 http://spohr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:88 http://spohr.debian.org/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:89 http://spohr.debian.org/debian/ unstable/main gcc ia64 4:4.6.4-2 [5000 B]
+Get:90 http://spohr.debian.org/debian/ unstable/main gfortran-4.6 ia64 4.6.4-4 [6967 kB]
+Get:91 http://spohr.debian.org/debian/ unstable/main gfortran ia64 4:4.6.4-2 [1124 B]
+Get:92 http://spohr.debian.org/debian/ unstable/main libblas3 ia64 1.2.20110419-5 [335 kB]
+Get:93 http://spohr.debian.org/debian/ unstable/main libblas-dev ia64 1.2.20110419-5 [367 kB]
+Get:94 http://spohr.debian.org/debian/ unstable/main libbz2-dev ia64 1.0.6-4 [51.7 kB]
+Get:95 http://spohr.debian.org/debian/ unstable/main libjpeg8-dev ia64 8d-1 [355 kB]
+Get:96 http://spohr.debian.org/debian/ unstable/main liblapack3 ia64 3.4.2+dfsg-1 [7550 kB]
+Get:97 http://spohr.debian.org/debian/ unstable/main liblapack-dev ia64 3.4.2+dfsg-1 [8319 kB]
+Get:98 http://spohr.debian.org/debian/ unstable/main libtinfo-dev ia64 5.9+20130608-1 [140 kB]
+Get:99 http://spohr.debian.org/debian/ unstable/main libncurses5-dev ia64 5.9+20130608-1 [302 kB]
+Get:100 http://spohr.debian.org/debian/ unstable/main libpaper-utils ia64 1.1.24+nmu2 [19.6 kB]
+Get:101 http://spohr.debian.org/debian/ unstable/main libpcre3-dev ia64 1:8.31-2 [414 kB]
+Get:102 http://spohr.debian.org/debian/ unstable/main zlib1g-dev ia64 1:1.2.8.dfsg-1 [253 kB]
+Get:103 http://spohr.debian.org/debian/ unstable/main libpng12-dev ia64 1.2.49-4 [306 kB]
+Get:104 http://spohr.debian.org/debian/ unstable/main libreadline6-dev ia64 6.2+dfsg-0.1 [265 kB]
+Get:105 http://spohr.debian.org/debian/ unstable/main libreadline-dev ia64 6.2+dfsg-0.1 [896 B]
+Get:106 http://spohr.debian.org/debian/ unstable/main zip ia64 3.0-7 [443 kB]
+Get:107 http://spohr.debian.org/debian/ unstable/main unzip ia64 6.0-9 [266 kB]
+Get:108 http://spohr.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:109 http://spohr.debian.org/debian/ unstable/main tcl8.5 ia64 8.5.14-2 [1920 kB]
+Get:110 http://spohr.debian.org/debian/ unstable/main tk8.5 ia64 8.5.14-2 [1525 kB]
+Get:111 http://spohr.debian.org/debian/ unstable/main r-base-core ia64 3.0.1-6 [22.6 MB]
+Get:112 http://spohr.debian.org/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 103 MB in 12s (8306 kB/s)
-(Reading database ... 10767 files and directories currently installed.)
-Preparing to replace libc6.1-dev:ia64 2.13-38 (using .../libc6.1-dev_2.17-3_ia64.deb) ...
-Unpacking replacement libc6.1-dev:ia64 ...
-Preparing to replace libc-dev-bin 2.13-38 (using .../libc-dev-bin_2.17-3_ia64.deb) ...
-Unpacking replacement libc-dev-bin ...
-Preparing to replace libc6.1:ia64 2.13-38 (using .../libc6.1_2.17-3_ia64.deb) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Unpacking replacement libc6.1:ia64 ...
-Setting up libc6.1:ia64 (2.17-3) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Nothing to restart.
-(Reading database ... 10789 files and directories currently installed.)
-Preparing to replace libtinfo5:ia64 5.9-10 (using .../libtinfo5_5.9+20130504-1_ia64.deb) ...
+Fetched 97.1 MB in 7s (12.6 MB/s)
+(Reading database ... 10862 files and directories currently installed.)
+Preparing to replace ncurses-bin 5.9+20130504-1 (using .../ncurses-bin_5.9+20130608-1_ia64.deb) ...
+Unpacking replacement ncurses-bin ...
+Setting up ncurses-bin (5.9+20130608-1) ...
+(Reading database ... 10862 files and directories currently installed.)
+Preparing to replace libgomp1:ia64 4.8.0-7 (using .../libgomp1_4.8.1-8_ia64.deb) ...
+Unpacking replacement libgomp1:ia64 ...
+Preparing to replace gcc-4.8-base:ia64 4.8.0-7 (using .../gcc-4.8-base_4.8.1-8_ia64.deb) ...
+Unpacking replacement gcc-4.8-base:ia64 ...
+Setting up gcc-4.8-base:ia64 (4.8.1-8) ...
+(Reading database ... 10862 files and directories currently installed.)
+Preparing to replace libstdc++6:ia64 4.8.0-7 (using .../libstdc++6_4.8.1-8_ia64.deb) ...
+Unpacking replacement libstdc++6:ia64 ...
+Setting up libstdc++6:ia64 (4.8.1-8) ...
+Processing triggers for libc-bin ...
+ldconfig deferred processing now taking place
+(Reading database ... 10862 files and directories currently installed.)
+Preparing to replace libquadmath0:ia64 4.8.0-7 (using .../libquadmath0_4.8.1-8_ia64.deb) ...
+Unpacking replacement libquadmath0:ia64 ...
+Preparing to replace libgcc1:ia64 1:4.8.0-7 (using .../libgcc1_1%3a4.8.1-8_ia64.deb) ...
+Unpacking replacement libgcc1:ia64 ...
+Setting up libgcc1:ia64 (1:4.8.1-8) ...
+Processing triggers for libc-bin ...
+ldconfig deferred processing now taking place
+(Reading database ... 10862 files and directories currently installed.)
+Preparing to replace libtinfo5:ia64 5.9+20130504-1 (using .../libtinfo5_5.9+20130608-1_ia64.deb) ...
Unpacking replacement libtinfo5:ia64 ...
-Setting up libtinfo5:ia64 (5.9+20130504-1) ...
-(Reading database ... 10789 files and directories currently installed.)
-Preparing to replace libncurses5:ia64 5.9-10 (using .../libncurses5_5.9+20130504-1_ia64.deb) ...
+Setting up libtinfo5:ia64 (5.9+20130608-1) ...
+Processing triggers for libc-bin ...
+ldconfig deferred processing now taking place
+(Reading database ... 10862 files and directories currently installed.)
+Preparing to replace libncurses5:ia64 5.9+20130504-1 (using .../libncurses5_5.9+20130608-1_ia64.deb) ...
Unpacking replacement libncurses5:ia64 ...
-Setting up libncurses5:ia64 (5.9+20130504-1) ...
-(Reading database ... 10789 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_ia64.deb) ...
-Unpacking replacement ncurses-bin ...
-Setting up ncurses-bin (5.9+20130504-1) ...
-(Reading database ... 10787 files and directories currently installed.)
-Preparing to replace zlib1g:ia64 1:1.2.7.dfsg-13 (using .../zlib1g_1%3a1.2.8.dfsg-1_ia64.deb) ...
-Unpacking replacement zlib1g:ia64 ...
-Setting up zlib1g:ia64 (1:1.2.8.dfsg-1) ...
+Setting up libncurses5:ia64 (5.9+20130608-1) ...
+Processing triggers for libc-bin ...
+ldconfig deferred processing now taking place
Selecting previously unselected package libpipeline1:ia64.
-(Reading database ... 10787 files and directories currently installed.)
-Unpacking libpipeline1:ia64 (from .../libpipeline1_1.2.3-1_ia64.deb) ...
+(Reading database ... 10862 files and directories currently installed.)
+Unpacking libpipeline1:ia64 (from .../libpipeline1_1.2.4-1_ia64.deb) ...
+Selecting previously unselected package libudev0:ia64.
+Unpacking libudev0:ia64 (from .../libudev0_175-7.2_ia64.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_ia64.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_ia64.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_ia64.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_ia64.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_ia64.deb) ...
Selecting previously unselected package libasprintf0c2:ia64.
-Unpacking libasprintf0c2:ia64 (from .../libasprintf0c2_0.18.1.1-10_ia64.deb) ...
+Unpacking libasprintf0c2:ia64 (from .../libasprintf0c2_0.18.3-1_ia64.deb) ...
Selecting previously unselected package libmagic1:ia64.
-Unpacking libmagic1:ia64 (from .../libmagic1_1%3a5.14-1_ia64.deb) ...
-Selecting previously unselected package libpcre3:ia64.
-Unpacking libpcre3:ia64 (from .../libpcre3_1%3a8.31-2_ia64.deb) ...
+Unpacking libmagic1:ia64 (from .../libmagic1_1%3a5.14-2_ia64.deb) ...
Selecting previously unselected package libxml2:ia64.
-Unpacking libxml2:ia64 (from .../libxml2_2.8.0+dfsg1-7+nmu1_ia64.deb) ...
+Unpacking libxml2:ia64 (from .../libxml2_2.9.1+dfsg1-2_ia64.deb) ...
+Selecting previously unselected package libdrm2:ia64.
+Unpacking libdrm2:ia64 (from .../libdrm2_2.4.45-3_ia64.deb) ...
+Selecting previously unselected package libglapi-mesa:ia64.
+Unpacking libglapi-mesa:ia64 (from .../libglapi-mesa_9.1.4-1_ia64.deb) ...
+Selecting previously unselected package libxau6:ia64.
+Unpacking libxau6:ia64 (from .../libxau6_1%3a1.0.8-1_ia64.deb) ...
+Selecting previously unselected package libxdmcp6:ia64.
+Unpacking libxdmcp6:ia64 (from .../libxdmcp6_1%3a1.1.1-1_ia64.deb) ...
+Selecting previously unselected package libxcb1:ia64.
+Unpacking libxcb1:ia64 (from .../libxcb1_1.9.1-3_ia64.deb) ...
+Selecting previously unselected package libxcb-dri2-0:ia64.
+Unpacking libxcb-dri2-0:ia64 (from .../libxcb-dri2-0_1.9.1-3_ia64.deb) ...
+Selecting previously unselected package libgbm1:ia64.
+Unpacking libgbm1:ia64 (from .../libgbm1_9.1.4-1_ia64.deb) ...
+Selecting previously unselected package libffi6:ia64.
+Unpacking libffi6:ia64 (from .../libffi6_3.0.13-4_ia64.deb) ...
+Selecting previously unselected package libwayland-client0:ia64.
+Unpacking libwayland-client0:ia64 (from .../libwayland-client0_1.1.0-2_ia64.deb) ...
+Selecting previously unselected package libwayland-server0:ia64.
+Unpacking libwayland-server0:ia64 (from .../libwayland-server0_1.1.0-2_ia64.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:ia64.
+Unpacking libx11-6:ia64 (from .../libx11-6_2%3a1.6.0-1_ia64.deb) ...
+Selecting previously unselected package libx11-xcb1:ia64.
+Unpacking libx11-xcb1:ia64 (from .../libx11-xcb1_2%3a1.6.0-1_ia64.deb) ...
+Selecting previously unselected package libxcb-render0:ia64.
+Unpacking libxcb-render0:ia64 (from .../libxcb-render0_1.9.1-3_ia64.deb) ...
+Selecting previously unselected package libxcb-shape0:ia64.
+Unpacking libxcb-shape0:ia64 (from .../libxcb-shape0_1.9.1-3_ia64.deb) ...
+Selecting previously unselected package libxcb-xfixes0:ia64.
+Unpacking libxcb-xfixes0:ia64 (from .../libxcb-xfixes0_1.9.1-3_ia64.deb) ...
+Selecting previously unselected package libegl1-mesa:ia64.
+Unpacking libegl1-mesa:ia64 (from .../libegl1-mesa_9.1.4-1_ia64.deb) ...
Selecting previously unselected package libexpat1:ia64.
-Unpacking libexpat1:ia64 (from .../libexpat1_2.1.0-3_ia64.deb) ...
+Unpacking libexpat1:ia64 (from .../libexpat1_2.1.0-4_ia64.deb) ...
Selecting previously unselected package libfreetype6:ia64.
Unpacking libfreetype6:ia64 (from .../libfreetype6_2.4.9-1.1_ia64.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:ia64.
-Unpacking libfontconfig1:ia64 (from .../libfontconfig1_2.9.0-7.1_ia64.deb) ...
+Unpacking libfontconfig1:ia64 (from .../libfontconfig1_2.10.2-2_ia64.deb) ...
+Selecting previously unselected package libxcb-glx0:ia64.
+Unpacking libxcb-glx0:ia64 (from .../libxcb-glx0_1.9.1-3_ia64.deb) ...
+Selecting previously unselected package libxfixes3:ia64.
+Unpacking libxfixes3:ia64 (from .../libxfixes3_1%3a5.0.1-1_ia64.deb) ...
+Selecting previously unselected package libxdamage1:ia64.
+Unpacking libxdamage1:ia64 (from .../libxdamage1_1%3a1.1.4-1_ia64.deb) ...
+Selecting previously unselected package libxext6:ia64.
+Unpacking libxext6:ia64 (from .../libxext6_2%3a1.3.2-1_ia64.deb) ...
+Selecting previously unselected package libxxf86vm1:ia64.
+Unpacking libxxf86vm1:ia64 (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_ia64.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:ia64.
+Unpacking libgl1-mesa-glx:ia64 (from .../libgl1-mesa-glx_9.1.4-1_ia64.deb) ...
Selecting previously unselected package libpixman-1-0:ia64.
-Unpacking libpixman-1-0:ia64 (from .../libpixman-1-0_0.26.0-4_ia64.deb) ...
+Unpacking libpixman-1-0:ia64 (from .../libpixman-1-0_0.30.0-3_ia64.deb) ...
Selecting previously unselected package libpng12-0:ia64.
Unpacking libpng12-0:ia64 (from .../libpng12-0_1.2.49-4_ia64.deb) ...
-Selecting previously unselected package libxau6:ia64.
-Unpacking libxau6:ia64 (from .../libxau6_1%3a1.0.7-1_ia64.deb) ...
-Selecting previously unselected package libxdmcp6:ia64.
-Unpacking libxdmcp6:ia64 (from .../libxdmcp6_1%3a1.1.1-1_ia64.deb) ...
-Selecting previously unselected package libxcb1:ia64.
-Unpacking libxcb1:ia64 (from .../libxcb1_1.8.1-2_ia64.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:ia64.
-Unpacking libx11-6:ia64 (from .../libx11-6_2%3a1.5.0-1_ia64.deb) ...
-Selecting previously unselected package libxcb-render0:ia64.
-Unpacking libxcb-render0:ia64 (from .../libxcb-render0_1.8.1-2_ia64.deb) ...
Selecting previously unselected package libxcb-shm0:ia64.
-Unpacking libxcb-shm0:ia64 (from .../libxcb-shm0_1.8.1-2_ia64.deb) ...
-Selecting previously unselected package libxext6:ia64.
-Unpacking libxext6:ia64 (from .../libxext6_2%3a1.3.1-2_ia64.deb) ...
+Unpacking libxcb-shm0:ia64 (from .../libxcb-shm0_1.9.1-3_ia64.deb) ...
Selecting previously unselected package libxrender1:ia64.
-Unpacking libxrender1:ia64 (from .../libxrender1_1%3a0.9.7-1_ia64.deb) ...
+Unpacking libxrender1:ia64 (from .../libxrender1_1%3a0.9.8-1_ia64.deb) ...
Selecting previously unselected package libcairo2:ia64.
-Unpacking libcairo2:ia64 (from .../libcairo2_1.12.14-4_ia64.deb) ...
-Selecting previously unselected package libffi6:ia64.
-Unpacking libffi6:ia64 (from .../libffi6_3.0.13-4_ia64.deb) ...
+Unpacking libcairo2:ia64 (from .../libcairo2_1.12.14-5_ia64.deb) ...
Selecting previously unselected package libglib2.0-0:ia64.
-Unpacking libglib2.0-0:ia64 (from .../libglib2.0-0_2.36.1-2build1_ia64.deb) ...
+Unpacking libglib2.0-0:ia64 (from .../libglib2.0-0_2.36.3-3_ia64.deb) ...
Selecting previously unselected package libcroco3:ia64.
Unpacking libcroco3:ia64 (from .../libcroco3_0.6.8-2_ia64.deb) ...
Selecting previously unselected package libdatrie1:ia64.
Unpacking libdatrie1:ia64 (from .../libdatrie1_0.2.6-2_ia64.deb) ...
-Selecting previously unselected package libunistring0:ia64.
-Unpacking libunistring0:ia64 (from .../libunistring0_0.9.3-5_ia64.deb) ...
-Selecting previously unselected package libgettextpo0:ia64.
-Unpacking libgettextpo0:ia64 (from .../libgettextpo0_0.18.1.1-10_ia64.deb) ...
-Selecting previously unselected package gcc-4.8-base:ia64.
-Unpacking gcc-4.8-base:ia64 (from .../gcc-4.8-base_4.8.0-7_ia64.deb) ...
Selecting previously unselected package libgfortran3:ia64.
-Unpacking libgfortran3:ia64 (from .../libgfortran3_4.8.0-7_ia64.deb) ...
+Unpacking libgfortran3:ia64 (from .../libgfortran3_4.8.1-8_ia64.deb) ...
+Selecting previously unselected package libgraphite2-3:ia64.
+Unpacking libgraphite2-3:ia64 (from .../libgraphite2-3_1.2.3-1_ia64.deb) ...
+Selecting previously unselected package libharfbuzz0a:ia64.
+Unpacking libharfbuzz0a:ia64 (from .../libharfbuzz0a_0.9.19-1_ia64.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:ia64.
@@ -421,12 +460,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:ia64.
Unpacking libthai0:ia64 (from .../libthai0_0.1.19-2_ia64.deb) ...
-Selecting previously unselected package libxft2:ia64.
-Unpacking libxft2:ia64 (from .../libxft2_2.3.1-1_ia64.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_ia64.deb) ...
-Selecting previously unselected package libpango1.0-0:ia64.
-Unpacking libpango1.0-0:ia64 (from .../libpango1.0-0_1.30.0-1_ia64.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_ia64.deb) ...
+Selecting previously unselected package libpango-1.0-0:ia64.
+Unpacking libpango-1.0-0:ia64 (from .../libpango-1.0-0_1.32.5-5+b1_ia64.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:ia64.
+Unpacking libpangoft2-1.0-0:ia64 (from .../libpangoft2-1.0-0_1.32.5-5+b1_ia64.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:ia64.
+Unpacking libpangocairo-1.0-0:ia64 (from .../libpangocairo-1.0-0_1.32.5-5+b1_ia64.deb) ...
Selecting previously unselected package libpaper1:ia64.
Unpacking libpaper1:ia64 (from .../libpaper1_1.1.24+nmu2_ia64.deb) ...
Selecting previously unselected package libpcrecpp0:ia64.
@@ -436,47 +477,48 @@ Unpacking libsm6:ia64 (from .../libsm6_2%3a1.2.1-2_ia64.deb) ...
Selecting previously unselected package libjbig0:ia64.
Unpacking libjbig0:ia64 (from .../libjbig0_2.0-2_ia64.deb) ...
Selecting previously unselected package libtiff5:ia64.
-Unpacking libtiff5:ia64 (from .../libtiff5_4.0.2-6_ia64.deb) ...
+Unpacking libtiff5:ia64 (from .../libtiff5_4.0.3-1_ia64.deb) ...
+Selecting previously unselected package libunistring0:ia64.
+Unpacking libunistring0:ia64 (from .../libunistring0_0.9.3-5_ia64.deb) ...
+Selecting previously unselected package libxft2:ia64.
+Unpacking libxft2:ia64 (from .../libxft2_2.3.1-1_ia64.deb) ...
Selecting previously unselected package libxss1:ia64.
Unpacking libxss1:ia64 (from .../libxss1_1%3a1.2.2-1_ia64.deb) ...
Selecting previously unselected package libxt6:ia64.
-Unpacking libxt6:ia64 (from .../libxt6_1%3a1.1.3-1_ia64.deb) ...
-Selecting previously unselected package libmpc3:ia64.
-Unpacking libmpc3:ia64 (from .../libmpc3_1.0.1-1_ia64.deb) ...
+Unpacking libxt6:ia64 (from .../libxt6_1%3a1.1.3-1+deb7u1_ia64.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_ia64.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_ia64.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_ia64.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_ia64.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Preparing to replace libstdc++6-4.6-dev 4.6.3-15 (using .../libstdc++6-4.6-dev_4.6.4-2_ia64.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
+Preparing to replace libstdc++6-4.6-dev 4.6.4-2 (using .../libstdc++6-4.6-dev_4.6.4-4_ia64.deb) ...
Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.3-15 (using .../g++-4.6_4.6.4-2_ia64.deb) ...
+Preparing to replace g++-4.6 4.6.4-2 (using .../g++-4.6_4.6.4-4_ia64.deb) ...
Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.3-15 (using .../gcc-4.6_4.6.4-2_ia64.deb) ...
+Preparing to replace gcc-4.6 4.6.4-2 (using .../gcc-4.6_4.6.4-4_ia64.deb) ...
Unpacking replacement gcc-4.6 ...
-Preparing to replace cpp-4.6 4.6.3-15 (using .../cpp-4.6_4.6.4-2_ia64.deb) ...
+Preparing to replace cpp-4.6 4.6.4-2 (using .../cpp-4.6_4.6.4-4_ia64.deb) ...
Unpacking replacement cpp-4.6 ...
-Preparing to replace gcc-4.6-base:ia64 4.6.3-15 (using .../gcc-4.6-base_4.6.4-2_ia64.deb) ...
+Preparing to replace gcc-4.6-base:ia64 4.6.4-2 (using .../gcc-4.6-base_4.6.4-4_ia64.deb) ...
Unpacking replacement gcc-4.6-base:ia64 ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_ia64.deb) ...
-Selecting previously unselected package libasprintf-dev:ia64.
-Unpacking libasprintf-dev:ia64 (from .../libasprintf-dev_0.18.1.1-10_ia64.deb) ...
-Selecting previously unselected package libgettextpo-dev:ia64.
-Unpacking libgettextpo-dev:ia64 (from .../libgettextpo-dev_0.18.1.1-10_ia64.deb) ...
+Preparing to replace cpp 4:4.6.3-8 (using .../cpp_4%3a4.6.4-2_ia64.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_ia64.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_ia64.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Preparing to replace gcc 4:4.6.3-8 (using .../gcc_4%3a4.6.4-2_ia64.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_ia64.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-4_ia64.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_ia64.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.4-2_ia64.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_ia64.deb) ...
Selecting previously unselected package libblas-dev.
@@ -490,9 +532,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_ia64.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_ia64.deb) ...
Selecting previously unselected package libtinfo-dev:ia64.
-Unpacking libtinfo-dev:ia64 (from .../libtinfo-dev_5.9+20130504-1_ia64.deb) ...
+Unpacking libtinfo-dev:ia64 (from .../libtinfo-dev_5.9+20130608-1_ia64.deb) ...
Selecting previously unselected package libncurses5-dev:ia64.
-Unpacking libncurses5-dev:ia64 (from .../libncurses5-dev_5.9+20130504-1_ia64.deb) ...
+Unpacking libncurses5-dev:ia64 (from .../libncurses5-dev_5.9+20130608-1_ia64.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_ia64.deb) ...
Selecting previously unselected package libpcre3-dev:ia64.
@@ -512,54 +554,70 @@ Unpacking unzip (from .../archives/unzip_6.0-9_ia64.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_ia64.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_ia64.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_ia64.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_ia64.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1-1_ia64.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_ia64.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1~20130512-1_all.deb) ...
-Setting up libc-dev-bin (2.17-3) ...
-Setting up libc6.1-dev:ia64 (2.17-3) ...
-Setting up libpipeline1:ia64 (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:ia64 (4.8.1-8) ...
+Setting up libquadmath0:ia64 (4.8.1-8) ...
+Setting up libpipeline1:ia64 (1.2.4-1) ...
+Setting up libudev0:ia64 (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
-Setting up man-db (2.6.3-6) ...
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:ia64 (0.18.1.1-10) ...
-Setting up libmagic1:ia64 (1:5.14-1) ...
-Setting up libpcre3:ia64 (1:8.31-2) ...
-Setting up libxml2:ia64 (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:ia64 (2.1.0-3) ...
+Setting up libasprintf0c2:ia64 (0.18.3-1) ...
+Setting up libmagic1:ia64 (1:5.14-2) ...
+Setting up libxml2:ia64 (2.9.1+dfsg1-2) ...
+Setting up libdrm2:ia64 (2.4.45-3) ...
+Setting up libglapi-mesa:ia64 (9.1.4-1) ...
+Setting up libxau6:ia64 (1:1.0.8-1) ...
+Setting up libxdmcp6:ia64 (1:1.1.1-1) ...
+Setting up libxcb1:ia64 (1.9.1-3) ...
+Setting up libxcb-dri2-0:ia64 (1.9.1-3) ...
+Setting up libgbm1:ia64 (9.1.4-1) ...
+Setting up libffi6:ia64 (3.0.13-4) ...
+Setting up libwayland-client0:ia64 (1.1.0-2) ...
+Setting up libwayland-server0:ia64 (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:ia64 (2:1.6.0-1) ...
+Setting up libx11-xcb1:ia64 (2:1.6.0-1) ...
+Setting up libxcb-render0:ia64 (1.9.1-3) ...
+Setting up libxcb-shape0:ia64 (1.9.1-3) ...
+Setting up libxcb-xfixes0:ia64 (1.9.1-3) ...
+Setting up libegl1-mesa:ia64 (9.1.4-1) ...
+Setting up libexpat1:ia64 (2.1.0-4) ...
Setting up libfreetype6:ia64 (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:ia64 (2.9.0-7.1) ...
-Setting up libpixman-1-0:ia64 (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:ia64 (2.10.2-2) ...
+Setting up libxcb-glx0:ia64 (1.9.1-3) ...
+Setting up libxfixes3:ia64 (1:5.0.1-1) ...
+Setting up libxdamage1:ia64 (1:1.1.4-1) ...
+Setting up libxext6:ia64 (2:1.3.2-1) ...
+Setting up libxxf86vm1:ia64 (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:ia64 (9.1.4-1) ...
+Setting up libpixman-1-0:ia64 (0.30.0-3) ...
Setting up libpng12-0:ia64 (1.2.49-4) ...
-Setting up libxau6:ia64 (1:1.0.7-1) ...
-Setting up libxdmcp6:ia64 (1:1.1.1-1) ...
-Setting up libxcb1:ia64 (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:ia64 (2:1.5.0-1) ...
-Setting up libxcb-render0:ia64 (1.8.1-2) ...
-Setting up libxcb-shm0:ia64 (1.8.1-2) ...
-Setting up libxext6:ia64 (2:1.3.1-2) ...
-Setting up libxrender1:ia64 (1:0.9.7-1) ...
-Setting up libcairo2:ia64 (1.12.14-4) ...
-Setting up libffi6:ia64 (3.0.13-4) ...
-Setting up libglib2.0-0:ia64 (2.36.1-2build1) ...
+Setting up libxcb-shm0:ia64 (1.9.1-3) ...
+Setting up libxrender1:ia64 (1:0.9.8-1) ...
+Setting up libcairo2:ia64 (1.12.14-5) ...
+Setting up libglib2.0-0:ia64 (2.36.3-3) ...
No schema files found: doing nothing.
Setting up libcroco3:ia64 (0.6.8-2) ...
Setting up libdatrie1:ia64 (0.2.6-2) ...
-Setting up libunistring0:ia64 (0.9.3-5) ...
-Setting up libgettextpo0:ia64 (0.18.1.1-10) ...
-Setting up gcc-4.8-base:ia64 (4.8.0-7) ...
-Setting up libgfortran3:ia64 (4.8.0-7) ...
+Setting up libgfortran3:ia64 (4.8.1-8) ...
+Setting up libgraphite2-3:ia64 (1.2.3-1) ...
+Setting up libharfbuzz0a:ia64 (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
@@ -567,35 +625,36 @@ Setting up libice6:ia64 (2:1.0.8-2) ...
Setting up libjpeg8:ia64 (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:ia64 (0.1.19-2) ...
-Setting up libxft2:ia64 (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:ia64 (1.30.0-1) ...
+Setting up libpango-1.0-0:ia64 (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:ia64 (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:ia64 (1.32.5-5+b1) ...
Setting up libpaper1:ia64 (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:ia64 (1:8.31-2) ...
Setting up libsm6:ia64 (2:1.2.1-2) ...
Setting up libjbig0:ia64 (2.0-2) ...
-Setting up libtiff5:ia64 (4.0.2-6) ...
+Setting up libtiff5:ia64 (4.0.3-1) ...
+Setting up libunistring0:ia64 (0.9.3-5) ...
+Setting up libxft2:ia64 (2.3.1-1) ...
Setting up libxss1:ia64 (1:1.2.2-1) ...
-Setting up libxt6:ia64 (1:1.1.3-1) ...
-Setting up libmpc3:ia64 (1.0.1-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up gcc-4.6-base:ia64 (4.6.4-2) ...
-Setting up cpp-4.6 (4.6.4-2) ...
-Setting up gcc-4.6 (4.6.4-2) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libasprintf-dev:ia64 (0.18.1.1-10) ...
-Setting up libgettextpo-dev:ia64 (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:ia64 (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gcc-4.6-base:ia64 (4.6.4-4) ...
+Setting up cpp-4.6 (4.6.4-4) ...
+Setting up gcc-4.6 (4.6.4-4) ...
+Setting up cpp (4:4.6.4-2) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up gcc (4:4.6.4-2) ...
+Setting up gfortran-4.6 (4.6.4-4) ...
+Setting up gfortran (4:4.6.4-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -607,8 +666,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:ia64 (5.9+20130504-1) ...
-Setting up libncurses5-dev:ia64 (5.9+20130504-1) ...
+Setting up libtinfo-dev:ia64 (5.9+20130608-1) ...
+Setting up libncurses5-dev:ia64 (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:ia64 (1:8.31-2) ...
Setting up zlib1g-dev:ia64 (1:1.2.8.dfsg-1) ...
@@ -618,28 +677,27 @@ Setting up libreadline-dev:ia64 (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1~20130512-1) ...
-Setting up g++-4.6 (4.6.4-2) ...
-Setting up libstdc++6-4.6-dev (4.6.4-2) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following package was automatically installed and is no longer required:
- libmpc2
-Use 'apt-get autoremove' to remove it.
-0 upgraded, 0 newly installed, 0 to remove and 34 not upgraded.
-Checking correctness of dependencies...
-Kernel: Linux 2.6.32-5-mckinley ia64 (ia64)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6.1-dev_2.17-3 libstdc++6_4.7.2-5 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.2.39-2
-Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-0.1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.13-3.2 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 debconf_1.5.49 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1:5.14-1 findutils_4.4.2-5 fo [...]
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
+Setting up g++-4.6 (4.6.4-4) ...
+Setting up libstdc++6-4.6-dev (4.6.4-4) ...
+Processing triggers for libc-bin ...
+ldconfig deferred processing now taking place
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: Linux 3.2.0-4-mckinley ia64 (ia64)
+Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-4 gcc-4.6_4.6.4-4 libc6.1-dev_2.17-3 libstdc++6_4.8.1-8 libstdc++6-4.6-dev_4.6.4-4 linux-libc-dev_3.8.13-1
+Package versions: apt_0.9.8.1 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.4 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.13-3.2 cpp_4:4.6.4-2 cpp-4.6_4.6.4-4 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 eatmydata_26-2 fakeroot_1.19-2 file_1:5.14-2 findutils [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -649,28 +707,46 @@ Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-0.
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+DEB_BUILD_OPTIONS=parallel=2
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-ia64-sbuild
+SCHROOT_CHROOT_NAME=sid-ia64-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-ia64-sbuild-60e3e077-c373-41d8-856e-db11d1d2b572
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture ia64
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -686,7 +762,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -705,26 +781,26 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1~20130512-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -734,13 +810,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -748,7 +824,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -784,9 +860,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save
- gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -816,79 +892,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_ia64.deb'.
- dpkg-genchanges -B -mia64 Build Daemon (alkman) <buildd_ia64-alkman at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_ia64.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_ia64.deb'.
+ dpkg-genchanges -B -mia64 Build Daemon (alkman) <buildd_ia64-alkman at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_ia64.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1355
+Build finished at 20130804-1002
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_ia64.changes:
+────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_ia64.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: ia64
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
Maintainer: ia64 Build Daemon (alkman) <buildd_ia64-alkman at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
- .
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- 9e4539ddb013088cebe15836888793b10fe13918 1620660 r-bioc-limma_3.16.3~dfsg-1_ia64.deb
+ 5cb1d895c323a7dda53caba4b8e3575d7748aa40 866188 r-bioc-limma_3.16.7~dfsg-1_ia64.deb
Checksums-Sha256:
- 999c92abdc18cd5a433a18e050af27125225bf2d370a497b225ff724ad1ad93d 1620660 r-bioc-limma_3.16.3~dfsg-1_ia64.deb
+ 8327183decb39b01a15203a004749525b06c70efb821f2f2c8f6dea5200b3ed4 866188 r-bioc-limma_3.16.7~dfsg-1_ia64.deb
Files:
- ae7c96da0f06a34fdeb7f4bb5f0ecd9c 1620660 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_ia64.deb
+ af2e369cfe2392010f0f3fa929a8684b 866188 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_ia64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_ia64.deb
+r-bioc-limma_3.16.7~dfsg-1_ia64.deb
───────────────────────────────────
new debian package, version 2.0.
- size 1620660 bytes: control archive= 1679 bytes.
- 783 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ size 866188 bytes: control archive=1624 bytes.
+ 774 bytes, 16 lines control
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: ia64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1793
- Depends: libc6.1 (>= 2.2), r-base-core (>= 3.0.1~20130512-1)
+ Installed-Size: 1007
+ Depends: libc6.1 (>= 2.2), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -900,90 +973,91 @@ r-bioc-limma_3.16.3~dfsg-1_ia64.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-17 13:55 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
-drwxr-xr-x root/root 0 2013-05-17 13:55 ./usr/share/doc/r-bioc-limma/tests/
--rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 10085 2013-05-17 13:54 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2013-05-17 13:54 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 37337 2013-05-17 13:54 ./usr/lib/R/site-library/limma/html/00Index.html
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 2567 2013-05-17 13:54 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 6703 2013-05-17 13:54 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 3414 2013-05-17 13:54 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 494694 2013-05-17 13:54 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 1406 2013-05-17 13:54 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 11214 2013-05-17 13:54 ./usr/lib/R/site-library/limma/NEWS.Rd
--rw-r--r-- root/root 963 2013-05-17 13:54 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 806089 2013-05-17 13:54 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 45597 2013-05-17 13:54 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 1711 2013-05-17 13:54 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 673 2013-05-17 13:54 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 102936 2013-05-17 13:54 ./usr/lib/R/site-library/limma/doc/changelog.txt
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 4119 2013-05-17 13:54 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 206551 2013-05-17 13:54 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 1056 2013-05-17 13:54 ./usr/lib/R/site-library/limma/R/limma
-drwxr-xr-x root/root 0 2013-05-17 13:55 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 23480 2013-05-17 13:55 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2013-05-17 13:54 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 541 2013-05-17 13:54 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 219 2013-05-17 13:54 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 3089 2013-05-17 13:54 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 5944 2013-05-17 13:54 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 6375 2013-05-17 13:54 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 1070 2013-05-17 13:54 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 990 2013-05-17 13:54 ./usr/lib/R/site-library/limma/DESCRIPTION
--rw-r--r-- root/root 2046 2013-05-17 13:54 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 10085 2013-08-04 10:02 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2013-08-04 10:02 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 37564 2013-08-04 10:02 ./usr/lib/R/site-library/limma/html/00Index.html
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 2577 2013-08-04 10:02 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 6742 2013-08-04 10:02 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 3440 2013-08-04 10:02 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 492693 2013-08-04 10:02 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 1393 2013-08-04 10:02 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 11214 2013-08-04 10:02 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 963 2013-08-04 10:02 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 45597 2013-08-04 10:02 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 1711 2013-08-04 10:02 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 673 2013-08-04 10:02 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 104280 2013-08-04 10:02 ./usr/lib/R/site-library/limma/doc/changelog.txt
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 4117 2013-08-04 10:02 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 207869 2013-08-04 10:02 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 1056 2013-08-04 10:02 ./usr/lib/R/site-library/limma/R/limma
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 23208 2013-08-04 10:02 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2013-08-04 10:02 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 542 2013-08-04 10:02 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 219 2013-08-04 10:02 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 3098 2013-08-04 10:02 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 5952 2013-08-04 10:02 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 6386 2013-08-04 10:02 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 1071 2013-08-04 10:02 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 990 2013-08-04 10:02 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 2095 2013-08-04 10:02 ./usr/lib/R/site-library/limma/NAMESPACE
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ia64-sbuild-b256aba1-d2f3-433c-a2c0-e93c0e9a6ca5/build/buildd-r-bioc-limma_3.16.3~dfsg-1-ia64-OggQqZ
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: ia64
-Build-Space: 8836
-Build-Time: 41
+Build Architecture: ia64
+Build-Space: 6420
+Build-Time: 40
Distribution: sid
-Install-Time: 246
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: ia64
+Install-Time: 43
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: ia64
Package: r-bioc-limma
-Package-Time: 340
-Source-Version: 3.16.3~dfsg-1
-Space: 8836
+Package-Time: 123
+Source-Version: 3.16.7~dfsg-1
+Space: 6420
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1355
-Build needed 00:05:40, 8836k disc space
+Finished at 20130804-1002
+Build needed 00:02:03, 6420k disc space
Signature with key '7913FDBB' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_ia64.changes 7913FDBB
+Successfully signed changes file
diff --git a/info b/info
index edf9cad..65fa6aa 100644
--- a/info
+++ b/info
@@ -1,13 +1,13 @@
-powerpc~1368718837~sid~successful
-i386~1368719016~sid~successful
-armhf~1368719096~sid~successful
-sparc~1368748329~sid~successful
-kfreebsd-amd64~1368795170~sid~successful
-hurd-i386~1368795361~sid~successful
-kfreebsd-i386~1368795980~sid~successful
-ia64~1368798926~sid~successful
-s390~1368799974~sid~successful
-s390x~1368800079~sid~successful
-mips~1368802607~sid~successful
-armel~1368803692~sid~successful
-mipsel~1368815485~sid~successful
+i386~1375608927~sid~successful
+powerpc~1375609003~sid~successful
+s390x~1375609012~sid~successful
+s390~1375609133~sid~successful
+kfreebsd-i386~1375609173~sid~successful
+kfreebsd-amd64~1375609190~sid~successful
+ia64~1375610583~sid~successful
+armel~1375611038~sid~successful
+mipsel~1375611410~sid~successful
+mips~1375611805~sid~successful
+armhf~1375612949~sid~successful
+sparc~1375615813~sid~successful
+hurd-i386~1375629680~sid~successful
diff --git a/kfreebsd-amd64.log b/kfreebsd-amd64.log
index abc8529..1ee0a89 100644
--- a/kfreebsd-amd64.log
+++ b/kfreebsd-amd64.log
@@ -1,66 +1,74 @@
-From buildd at fano.debian.org Fri May 17 12:52:50 2013
-Return-path: <buildd at fano.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at fayrfax.debian.org Sun Aug 04 09:39:50 2013
+Return-path: <buildd at fayrfax.debian.org>
+Received: from mailly.debian.org ([2001:41b8:202:deb:6564:a62:52c3:4b72])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
- by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at fano.debian.org>)
- id 1UdK9R-0005M9-Rt
- for logs at buildd.debian.org; Fri, 17 May 2013 12:52:50 +0000
-Received: from fano.debian.org ([206.12.19.110])
+ CN=mailly.debian.org, EMAIL=hostmaster at mailly.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
+ (Exim 4.72) (envelope-from <buildd at fayrfax.debian.org>)
+ id 1V5un0-00015c-2n
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 09:39:50 +0000
+Received: from fayrfax.debian.org ([2001:41b8:202:deb:1a1a:0:52c3:4b52])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=fano.debian.org, EMAIL=hostmaster at fano.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at fano.debian.org>)
- id 1UdK9Q-0000kS-GZ; Fri, 17 May 2013 12:52:49 +0000
-Received: from buildd by fano.debian.org with local (Exim 4.72)
- (envelope-from <buildd at fano.debian.org>)
- id 1UdK9O-000Gwu-8u; Fri, 17 May 2013 12:52:46 +0000
-Message-Id: <E1UdK9O-000Gwu-8u at fano.debian.org>
-MIME-Version: 1.0
+ CN=fayrfax.debian.org, EMAIL=hostmaster at fayrfax.debian.org (verified)
+ by mailly.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
+ (Exim 4.80) (envelope-from <buildd at fayrfax.debian.org>)
+ id 1V5umz-0006Qe-3Y; Sun, 04 Aug 2013 09:39:49 +0000
+Received: from buildd by fayrfax.debian.org with local (Exim 4.80)
+ (envelope-from <buildd at fayrfax.debian.org>)
+ id 1V5umy-000DkU-Ny; Sun, 04 Aug 2013 09:39:48 +0000
Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Fri, 17 May 2013 12:52:46 +0000
-From: buildd on fano <buildd at fano.debian.org>
-To: logs at buildd.debian.org,christoph at debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 09:39:48 +0000
+From: buildd on fayrfax <buildd at fayrfax.debian.org>
+To: christoph at debian.org,logs at buildd.debian.org
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on
kfreebsd-amd64 (dist=sid)
-Key-Id: 1B08409D
+Key-Id: A2010D5E
+Message-Id: <E1V5umy-000DkU-Ny at fayrfax.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on fano.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on fayrfax.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (kfreebsd-amd64) 17 May 2013 12:48 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (kfreebsd-amd64) 04 Aug 2013 09:38 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: kfreebsd-amd64
-Get:1 http://incoming.debian.org unstable Release.gpg [1571 B]
-Get:2 http://incoming.debian.org buildd-unstable Release.gpg [1571 B]
-Get:3 http://incoming.debian.org unstable Release [203 kB]
-Get:4 http://incoming.debian.org buildd-unstable Release [109 kB]
-Get:5 http://incoming.debian.org unstable/main Sources [6729 kB]
-Get:6 http://mirror-ubc.debian.org unstable Release.gpg [1571 B]
-Get:7 http://mirror-ubc.debian.org unstable Release [203 kB]
-Get:8 http://mirror-ubc.debian.org unstable/main Sources [6729 kB]
-Get:9 http://mirror-ubc.debian.org unstable/contrib Sources [53.7 kB]
-Get:10 http://mirror-ubc.debian.org unstable/non-free Sources [103 kB]
-Get:11 http://mirror-ubc.debian.org unstable/main kfreebsd-amd64 Packages [5917 kB]
-Get:12 http://mirror-ubc.debian.org unstable/contrib kfreebsd-amd64 Packages [36.7 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:15 http://incoming.debian.org unstable/main kfreebsd-amd64 Packages [5917 kB]
-Get:16 http://incoming.debian.org unstable/contrib kfreebsd-amd64 Packages [36.7 kB]
-Get:17 http://incoming.debian.org buildd-unstable/main Sources [107 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib Sources [873 B]
-Get:19 http://incoming.debian.org buildd-unstable/non-free Sources [2683 B]
-Get:20 http://incoming.debian.org buildd-unstable/main kfreebsd-amd64 Packages [59.8 kB]
-Get:21 http://incoming.debian.org buildd-unstable/contrib kfreebsd-amd64 Packages [14 B]
-Fetched 26.4 MB in 13s (1968 kB/s)
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: kfreebsd-amd64
+Host Architecture: kfreebsd-amd64
+Build Architecture: kfreebsd-amd64
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-CGsI9K/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-CGsI9K' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-ka-sbuild-1375609089-49458' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://debian.netcologne.de unstable InRelease [204 kB]
+Get:2 http://debian.netcologne.de unstable/main Sources [8616 kB]
+Get:3 http://incoming.debian.org unstable InRelease [204 kB]
+Get:4 http://incoming.debian.org buildd-unstable InRelease [111 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [8616 kB]
+Get:6 http://debian.netcologne.de unstable/contrib Sources [65.0 kB]
+Get:7 http://debian.netcologne.de unstable/non-free Sources [126 kB]
+Get:8 http://debian.netcologne.de unstable/main kfreebsd-amd64 Packages [7784 kB]
+Get:9 http://debian.netcologne.de unstable/contrib kfreebsd-amd64 Packages [44.4 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [65.0 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [126 kB]
+Get:12 http://incoming.debian.org unstable/main kfreebsd-amd64 Packages [7783 kB]
+Get:13 http://incoming.debian.org unstable/contrib kfreebsd-amd64 Packages [44.4 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [123 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [680 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2595 B]
+Get:17 http://incoming.debian.org buildd-unstable/main kfreebsd-amd64 Packages [91.5 kB]
+Get:18 http://incoming.debian.org buildd-unstable/contrib kfreebsd-amd64 Packages [20 B]
+Fetched 34.0 MB in 8s (4031 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -80,462 +88,342 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://mirror-ubc.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://mirror-ubc.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://mirror-ubc.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 2s (361 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 0s (327 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-Addydf/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: missing
-fakeroot: missing
-Checking for dependency conflicts...
-Installing positive dependencies: build-essential fakeroot
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-The following extra packages will be installed:
- binutils bzip2 cpp cpp-4.7 dpkg-dev g++ g++-4.7 gcc gcc-4.7 gcc-4.7-base
- gcc-4.8-base kfreebsd-kernel-headers libc-dev-bin libc0.1 libc0.1-dev
- libclass-isa-perl libdpkg-perl libgcc-4.7-dev libgcc1 libgmp10 libgomp1
- libmpc3 libmpfr4 libquadmath0 libstdc++6 libstdc++6-4.7-dev libswitch-perl
- libtimedate-perl make patch perl perl-modules
-Suggested packages:
- binutils-doc bzip2-doc cpp-doc gcc-4.7-locales debian-keyring g++-multilib
- g++-4.7-multilib gcc-4.7-doc libstdc++6-4.7-dbg gcc-multilib manpages-dev
- autoconf automake1.9 libtool flex bison gdb gcc-doc gcc-4.7-multilib
- libmudflap0-4.7-dev libgcc1-dbg libgomp1-dbg libitm1-dbg libquadmath0-dbg
- libmudflap0-dbg libcloog-ppl0 libppl-c4 libppl9 libpwl5 glibc-doc
- libstdc++6-4.7-doc make-doc ed diffutils-doc perl-doc
- libterm-readline-gnu-perl libterm-readline-perl-perl libpod-plainer-perl
-Recommended packages:
- libalgorithm-merge-perl libc6-dev libc-dev libfile-fcntllock-perl netbase
The following NEW packages will be installed:
- binutils build-essential bzip2 cpp cpp-4.7 dpkg-dev fakeroot g++ g++-4.7 gcc
- gcc-4.7 gcc-4.8-base kfreebsd-kernel-headers libc-dev-bin libc0.1-dev
- libclass-isa-perl libdpkg-perl libgcc-4.7-dev libgmp10 libgomp1 libmpc3
- libmpfr4 libquadmath0 libstdc++6-4.7-dev libswitch-perl libtimedate-perl
- make patch perl perl-modules
-The following packages will be upgraded:
- gcc-4.7-base libc0.1 libgcc1 libstdc++6
-4 upgraded, 30 newly installed, 0 to remove and 19 not upgraded.
-Need to get 26.8 MB/43.6 MB of archives.
-After this operation, 121 MB of additional disk space will be used.
-Get:1 http://mirror-ubc.debian.org/debian/ unstable/main gcc-4.8-base kfreebsd-amd64 4.8.0-7 [148 kB]
-Get:2 http://mirror-ubc.debian.org/debian/ unstable/main libc0.1 kfreebsd-amd64 2.17-3 [4153 kB]
-Get:3 http://mirror-ubc.debian.org/debian/ unstable/main libgcc1 kfreebsd-amd64 1:4.8.0-7 [43.3 kB]
-Get:4 http://mirror-ubc.debian.org/debian/ unstable/main libstdc++6 kfreebsd-amd64 4.8.0-7 [336 kB]
-Get:5 http://mirror-ubc.debian.org/debian/ unstable/main libgmp10 kfreebsd-amd64 2:5.1.1+dfsg-3 [272 kB]
-Get:6 http://mirror-ubc.debian.org/debian/ unstable/main libgomp1 kfreebsd-amd64 4.8.0-7 [26.8 kB]
-Get:7 http://mirror-ubc.debian.org/debian/ unstable/main libquadmath0 kfreebsd-amd64 4.8.0-7 [139 kB]
-Get:8 http://mirror-ubc.debian.org/debian/ unstable/main libmpc3 kfreebsd-amd64 1.0.1-1 [45.8 kB]
-Get:9 http://mirror-ubc.debian.org/debian/ unstable/main gcc-4.7-base kfreebsd-amd64 4.7.3-4 [149 kB]
-Get:10 http://mirror-ubc.debian.org/debian/ unstable/main libc-dev-bin kfreebsd-amd64 2.17-3 [233 kB]
-Get:11 http://mirror-ubc.debian.org/debian/ unstable/main libc0.1-dev kfreebsd-amd64 2.17-3 [2533 kB]
-Get:12 http://mirror-ubc.debian.org/debian/ unstable/main cpp-4.7 kfreebsd-amd64 4.7.3-4 [5286 kB]
-Get:13 http://mirror-ubc.debian.org/debian/ unstable/main libgcc-4.7-dev kfreebsd-amd64 4.7.3-4 [301 kB]
-Get:14 http://mirror-ubc.debian.org/debian/ unstable/main gcc-4.7 kfreebsd-amd64 4.7.3-4 [5689 kB]
-Get:15 http://mirror-ubc.debian.org/debian/ unstable/main libstdc++6-4.7-dev kfreebsd-amd64 4.7.3-4 [1647 kB]
-Get:16 http://mirror-ubc.debian.org/debian/ unstable/main g++-4.7 kfreebsd-amd64 4.7.3-4 [5752 kB]
+ sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 26.8 MB in 17s (1543 kB/s)
-Selecting previously unselected package gcc-4.8-base:kfreebsd-amd64.
-(Reading database ... 6744 files and directories currently installed.)
-Unpacking gcc-4.8-base:kfreebsd-amd64 (from .../gcc-4.8-base_4.8.0-7_kfreebsd-amd64.deb) ...
-Setting up gcc-4.8-base:kfreebsd-amd64 (4.8.0-7) ...
-(Reading database ... 6751 files and directories currently installed.)
-Preparing to replace libc0.1:kfreebsd-amd64 2.13-38 (using .../libc0.1_2.17-3_kfreebsd-amd64.deb) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Unpacking replacement libc0.1:kfreebsd-amd64 ...
-Setting up libc0.1:kfreebsd-amd64 (2.17-3) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Nothing to restart.
-(Reading database ... 6757 files and directories currently installed.)
-Preparing to replace libgcc1:kfreebsd-amd64 1:4.7.2-5 (using .../libgcc1_1%3a4.8.0-7_kfreebsd-amd64.deb) ...
-Unpacking replacement libgcc1:kfreebsd-amd64 ...
-Setting up libgcc1:kfreebsd-amd64 (1:4.8.0-7) ...
-(Reading database ... 6757 files and directories currently installed.)
-Preparing to replace libstdc++6:kfreebsd-amd64 4.7.2-5 (using .../libstdc++6_4.8.0-7_kfreebsd-amd64.deb) ...
-Unpacking replacement libstdc++6:kfreebsd-amd64 ...
-Setting up libstdc++6:kfreebsd-amd64 (4.8.0-7) ...
-Selecting previously unselected package libgmp10:kfreebsd-amd64.
-(Reading database ... 6757 files and directories currently installed.)
-Unpacking libgmp10:kfreebsd-amd64 (from .../libgmp10_2%3a5.1.1+dfsg-3_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libgomp1:kfreebsd-amd64.
-Unpacking libgomp1:kfreebsd-amd64 (from .../libgomp1_4.8.0-7_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libmpfr4:kfreebsd-amd64.
-Unpacking libmpfr4:kfreebsd-amd64 (from .../libmpfr4_3.1.1-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libquadmath0:kfreebsd-amd64.
-Unpacking libquadmath0:kfreebsd-amd64 (from .../libquadmath0_4.8.0-7_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libmpc3:kfreebsd-amd64.
-Unpacking libmpc3:kfreebsd-amd64 (from .../libmpc3_1.0.1-1_kfreebsd-amd64.deb) ...
-Preparing to replace gcc-4.7-base:kfreebsd-amd64 4.7.2-5 (using .../gcc-4.7-base_4.7.3-4_kfreebsd-amd64.deb) ...
-Unpacking replacement gcc-4.7-base:kfreebsd-amd64 ...
-Selecting previously unselected package bzip2.
-Unpacking bzip2 (from .../bzip2_1.0.6-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package kfreebsd-kernel-headers.
-Unpacking kfreebsd-kernel-headers (from .../kfreebsd-kernel-headers_0.83_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libclass-isa-perl.
-Unpacking libclass-isa-perl (from .../libclass-isa-perl_0.36-5_all.deb) ...
-Selecting previously unselected package perl-modules.
-Unpacking perl-modules (from .../perl-modules_5.14.2-21_all.deb) ...
-Selecting previously unselected package perl.
-Unpacking perl (from .../perl_5.14.2-21_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libswitch-perl.
-Unpacking libswitch-perl (from .../libswitch-perl_2.16-2_all.deb) ...
-Selecting previously unselected package patch.
-Unpacking patch (from .../patch_2.6.1-3_kfreebsd-amd64.deb) ...
-Selecting previously unselected package binutils.
-Unpacking binutils (from .../binutils_2.22-8_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libc-dev-bin.
-Unpacking libc-dev-bin (from .../libc-dev-bin_2.17-3_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libc0.1-dev:kfreebsd-amd64.
-Unpacking libc0.1-dev:kfreebsd-amd64 (from .../libc0.1-dev_2.17-3_kfreebsd-amd64.deb) ...
-Selecting previously unselected package cpp-4.7.
-Unpacking cpp-4.7 (from .../cpp-4.7_4.7.3-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package cpp.
-Unpacking cpp (from .../cpp_4%3a4.7.2-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libgcc-4.7-dev:kfreebsd-amd64.
-Unpacking libgcc-4.7-dev:kfreebsd-amd64 (from .../libgcc-4.7-dev_4.7.3-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package gcc-4.7.
-Unpacking gcc-4.7 (from .../gcc-4.7_4.7.3-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package gcc.
-Unpacking gcc (from .../gcc_4%3a4.7.2-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libstdc++6-4.7-dev:kfreebsd-amd64.
-Unpacking libstdc++6-4.7-dev:kfreebsd-amd64 (from .../libstdc++6-4.7-dev_4.7.3-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package g++-4.7.
-Unpacking g++-4.7 (from .../g++-4.7_4.7.3-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package g++.
-Unpacking g++ (from .../g++_4%3a4.7.2-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package make.
-Unpacking make (from .../make_3.81-8.2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libtimedate-perl.
-Unpacking libtimedate-perl (from .../libtimedate-perl_1.2000-1_all.deb) ...
-Selecting previously unselected package libdpkg-perl.
-Unpacking libdpkg-perl (from .../libdpkg-perl_1.16.10_all.deb) ...
-Selecting previously unselected package dpkg-dev.
-Unpacking dpkg-dev (from .../dpkg-dev_1.16.10_all.deb) ...
-Selecting previously unselected package build-essential.
-Unpacking build-essential (from .../build-essential_11.6_kfreebsd-amd64.deb) ...
-Selecting previously unselected package fakeroot.
-Unpacking fakeroot (from .../fakeroot_1.18.4-2_kfreebsd-amd64.deb) ...
-Setting up libgmp10:kfreebsd-amd64 (2:5.1.1+dfsg-3) ...
-Setting up libgomp1:kfreebsd-amd64 (4.8.0-7) ...
-Setting up libmpfr4:kfreebsd-amd64 (3.1.1-1) ...
-Setting up libquadmath0:kfreebsd-amd64 (4.8.0-7) ...
-Setting up libmpc3:kfreebsd-amd64 (1.0.1-1) ...
-Setting up gcc-4.7-base:kfreebsd-amd64 (4.7.3-4) ...
-Setting up bzip2 (1.0.6-4) ...
-Setting up kfreebsd-kernel-headers (0.83) ...
-Setting up libclass-isa-perl (0.36-5) ...
-Setting up patch (2.6.1-3) ...
-Setting up binutils (2.22-8) ...
-Setting up libc-dev-bin (2.17-3) ...
-Setting up libc0.1-dev:kfreebsd-amd64 (2.17-3) ...
-Setting up cpp-4.7 (4.7.3-4) ...
-Setting up cpp (4:4.7.2-1) ...
-Setting up libgcc-4.7-dev:kfreebsd-amd64 (4.7.3-4) ...
-Setting up gcc-4.7 (4.7.3-4) ...
-Setting up gcc (4:4.7.2-1) ...
-Setting up libstdc++6-4.7-dev:kfreebsd-amd64 (4.7.3-4) ...
-Setting up g++-4.7 (4.7.3-4) ...
-Setting up g++ (4:4.7.2-1) ...
-update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode
-Setting up make (3.81-8.2) ...
-Setting up fakeroot (1.18.4-2) ...
-update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
-Setting up libswitch-perl (2.16-2) ...
-Setting up perl-modules (5.14.2-21) ...
-Setting up perl (5.14.2-21) ...
-update-alternatives: using /usr/bin/prename to provide /usr/bin/rename (rename) in auto mode
-Setting up libtimedate-perl (1.2000-1) ...
-Setting up libdpkg-perl (1.16.10) ...
-Setting up dpkg-dev (1.16.10) ...
-Setting up build-essential (11.6) ...
-Removing negative dependencies:
+0 upgraded, 1 newly installed, 0 to remove and 47 not upgraded.
+Need to get 0 B/716 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 11523 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, freebsd-utils, grep, gzip, hostname, libc-bin, login, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, freebsd-utils, grep, gzip, hostname, libc-bin, login, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-n8NtvS/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 19 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, freebsd-utils, grep, gzip, hostname, libc-bin, login, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.1)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-1)
-bsdutils: already installed (1:2.20.1-5.3)
-coreutils: already installed (8.13-3.3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-freebsd-utils: already installed (9.0+ds1-11)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.13-38)
-login: already installed (1:4.1.5.1-1)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-21)
-sed: already installed (4.2.1-10)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-5)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (~*=PROVIDED=*=)
-gcc: already installed (4:4.7.2-1 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.7.2-1 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130516
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils file fontconfig fontconfig-config fonts-dejavu-core gettext
- gettext-base gfortran gfortran-4.7 groff-base html2text intltool-debian
- libasprintf-dev libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
- libcroco3 libdatrie1 libffi6 libfontconfig1 libfreetype6 libgettextpo-dev
- libgettextpo0 libgfortran-4.7-dev libgfortran3 libglib2.0-0 libice6 libjbig0
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5
- libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
- libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
- libtinfo-dev libtinfo5 libunistring0 libx11-6 libx11-data libxau6
- libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
- libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf r-base-core tcl8.5
- tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g zlib1g-dev
+ bsdmainutils cdbs cpp-4.8 debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core g++-4.8 gcc-4.8 gcc-4.8-base gettext gettext-base gfortran
+ gfortran-4.8 groff-base intltool-debian libasprintf0c2 libatomic1
+ libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libdrm2
+ libegl1-mesa libffi6 libfontconfig1 libfreetype6 libgcc-4.8-dev libgcc1
+ libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0
+ libgomp1 libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3
+ libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libquadmath0 libreadline-dev libreadline6-dev libsm6 libstdc++-4.8-dev
+ libstdc++6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0
+ libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0
+ libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1
+ libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6
+ libxxf86vm1 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5
+ ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts dh-make gettext-doc
- gfortran-multilib gfortran-doc gfortran-4.7-multilib gfortran-4.7-doc
- libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
- ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
- libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
- texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
- texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
- texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin
+ wamerican wordlist whois vacation devscripts gcc-4.8-locales dh-make
+ g++-4.8-multilib gcc-4.8-doc libstdc++6-4.8-dbg gcc-4.8-multilib
+ libmudflap0-4.8-dev libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg
+ libasan0-dbg libtsan0-dbg libbacktrace1-dbg libquadmath0-dbg libmudflap0-dbg
+ gettext-doc gfortran-multilib gfortran-doc gfortran-4.8-multilib
+ gfortran-4.8-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
+ ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
+ ttf-arphic-bkai00mp libstdc++-4.8-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
+ texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
+ texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
- fonts-dejavu-core gettext gettext-base gfortran gfortran-4.7 groff-base
- html2text intltool-debian libasprintf-dev libasprintf0c2 libblas-dev
- libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libffi6 libfontconfig1
- libfreetype6 libgettextpo-dev libgettextpo0 libgfortran-4.7-dev libgfortran3
- libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3
- libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3
- libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
- libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
- libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
- libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core
- ucf unzip x11-common xdg-utils zip zlib1g-dev
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libffi6 libfontconfig1
+ libfreetype6 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx libglapi-mesa
+ libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
+ libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
+ libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data
+ libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6 libx11-data
+ libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0 libxcb-render0 libxcb-shape0
+ libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3
+ libxft2 libxml2 libxrender1 libxss1 libxt6 libxxf86vm1 man-db po-debconf
+ r-base-core r-base-dev sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5
+ ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- libncurses5 libtinfo5 ncurses-bin zlib1g
-4 upgraded, 82 newly installed, 0 to remove and 15 not upgraded.
-Need to get 61.9 MB of archives.
-After this operation, 129 MB of additional disk space will be used.
-Get:1 http://mirror-ubc.debian.org/debian/ unstable/main libtinfo5 kfreebsd-amd64 5.9+20130504-1 [296 kB]
-Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libcroco3 kfreebsd-amd64 0.6.8-2 [134 kB]
-Get:3 http://mirror-ubc.debian.org/debian/ unstable/main libncurses5 kfreebsd-amd64 5.9+20130504-1 [114 kB]
-Get:4 http://mirror-ubc.debian.org/debian/ unstable/main ncurses-bin kfreebsd-amd64 5.9+20130504-1 [359 kB]
-Get:5 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g kfreebsd-amd64 1:1.2.8.dfsg-1 [90.8 kB]
-Get:6 http://mirror-ubc.debian.org/debian/ unstable/main libpipeline1 kfreebsd-amd64 1.2.3-1 [40.5 kB]
-Get:7 http://mirror-ubc.debian.org/debian/ unstable/main groff-base kfreebsd-amd64 1.22.2-2 [743 kB]
-Get:8 http://mirror-ubc.debian.org/debian/ unstable/main bsdmainutils kfreebsd-amd64 9.0.5 [211 kB]
-Get:9 http://mirror-ubc.debian.org/debian/ unstable/main man-db kfreebsd-amd64 2.6.3-6 [893 kB]
-Get:10 http://mirror-ubc.debian.org/debian/ unstable/main libasprintf0c2 kfreebsd-amd64 0.18.1.1-10 [27.2 kB]
-Get:11 http://mirror-ubc.debian.org/debian/ unstable/main libmagic1 kfreebsd-amd64 1:5.14-1 [216 kB]
-Get:12 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3 kfreebsd-amd64 1:8.31-2 [247 kB]
-Get:13 http://mirror-ubc.debian.org/debian/ unstable/main libxml2 kfreebsd-amd64 2.8.0+dfsg1-7+nmu1 [914 kB]
-Get:14 http://mirror-ubc.debian.org/debian/ unstable/main libfreetype6 kfreebsd-amd64 2.4.9-1.1 [451 kB]
-Get:15 http://mirror-ubc.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:16 http://mirror-ubc.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:17 http://mirror-ubc.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:18 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:19 http://mirror-ubc.debian.org/debian/ unstable/main libfontconfig1 kfreebsd-amd64 2.9.0-7.1 [300 kB]
-Get:20 http://mirror-ubc.debian.org/debian/ unstable/main libpixman-1-0 kfreebsd-amd64 0.26.0-4 [427 kB]
-Get:21 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-0 kfreebsd-amd64 1.2.49-4 [190 kB]
-Get:22 http://mirror-ubc.debian.org/debian/ unstable/main libxau6 kfreebsd-amd64 1:1.0.7-1 [18.8 kB]
-Get:23 http://mirror-ubc.debian.org/debian/ unstable/main libxdmcp6 kfreebsd-amd64 1:1.1.1-1 [26.3 kB]
-Get:24 http://mirror-ubc.debian.org/debian/ unstable/main libxcb1 kfreebsd-amd64 1.8.1-2 [50.1 kB]
-Get:25 http://mirror-ubc.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:26 http://mirror-ubc.debian.org/debian/ unstable/main libx11-6 kfreebsd-amd64 2:1.5.0-1 [900 kB]
-Get:27 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-render0 kfreebsd-amd64 1.8.1-2 [18.6 kB]
-Get:28 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-shm0 kfreebsd-amd64 1.8.1-2 [10.3 kB]
-Get:29 http://mirror-ubc.debian.org/debian/ unstable/main libxext6 kfreebsd-amd64 2:1.3.1-2 [55.3 kB]
-Get:30 http://mirror-ubc.debian.org/debian/ unstable/main libxrender1 kfreebsd-amd64 1:0.9.7-1 [32.9 kB]
-Get:31 http://mirror-ubc.debian.org/debian/ unstable/main libcairo2 kfreebsd-amd64 1.12.14-4 [1006 kB]
-Get:32 http://mirror-ubc.debian.org/debian/ unstable/main libffi6 kfreebsd-amd64 3.0.13-4 [21.1 kB]
-Get:33 http://mirror-ubc.debian.org/debian/ unstable/main libglib2.0-0 kfreebsd-amd64 2.36.1-2build1 [2048 kB]
-Get:34 http://mirror-ubc.debian.org/debian/ unstable/main libdatrie1 kfreebsd-amd64 0.2.6-2 [30.3 kB]
-Get:35 http://mirror-ubc.debian.org/debian/ unstable/main libunistring0 kfreebsd-amd64 0.9.3-5 [434 kB]
-Get:36 http://mirror-ubc.debian.org/debian/ unstable/main libgettextpo0 kfreebsd-amd64 0.18.1.1-10 [145 kB]
-Get:37 http://mirror-ubc.debian.org/debian/ unstable/main libgfortran3 kfreebsd-amd64 4.8.0-7 [349 kB]
-Get:38 http://mirror-ubc.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:39 http://mirror-ubc.debian.org/debian/ unstable/main libice6 kfreebsd-amd64 2:1.0.8-2 [63.0 kB]
-Get:40 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8 kfreebsd-amd64 8d-1 [134 kB]
-Get:41 http://mirror-ubc.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:42 http://mirror-ubc.debian.org/debian/ unstable/main libthai0 kfreebsd-amd64 0.1.19-2 [43.3 kB]
-Get:43 http://mirror-ubc.debian.org/debian/ unstable/main libxft2 kfreebsd-amd64 2.3.1-1 [61.4 kB]
-Get:44 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig kfreebsd-amd64 2.9.0-7.1 [349 kB]
-Get:45 http://mirror-ubc.debian.org/debian/ unstable/main libpango1.0-0 kfreebsd-amd64 1.30.0-1 [462 kB]
-Get:46 http://mirror-ubc.debian.org/debian/ unstable/main libpaper1 kfreebsd-amd64 1.1.24+nmu2 [22.1 kB]
-Get:47 http://mirror-ubc.debian.org/debian/ unstable/main libpcrecpp0 kfreebsd-amd64 1:8.31-2 [128 kB]
-Get:48 http://mirror-ubc.debian.org/debian/ unstable/main libsm6 kfreebsd-amd64 2:1.2.1-2 [34.2 kB]
-Get:49 http://mirror-ubc.debian.org/debian/ unstable/main libjbig0 kfreebsd-amd64 2.0-2 [32.0 kB]
-Get:50 http://mirror-ubc.debian.org/debian/ unstable/main libtiff5 kfreebsd-amd64 4.0.2-6 [234 kB]
-Get:51 http://mirror-ubc.debian.org/debian/ unstable/main libxss1 kfreebsd-amd64 1:1.2.2-1 [17.7 kB]
-Get:52 http://mirror-ubc.debian.org/debian/ unstable/main libxt6 kfreebsd-amd64 1:1.1.3-1 [211 kB]
-Get:53 http://mirror-ubc.debian.org/debian/ unstable/main file kfreebsd-amd64 1:5.14-1 [54.1 kB]
-Get:54 http://mirror-ubc.debian.org/debian/ unstable/main gettext-base kfreebsd-amd64 0.18.1.1-10 [153 kB]
-Get:55 http://mirror-ubc.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:56 http://mirror-ubc.debian.org/debian/ unstable/main html2text kfreebsd-amd64 1.3.2a-15 [104 kB]
-Get:57 http://mirror-ubc.debian.org/debian/ unstable/main libasprintf-dev kfreebsd-amd64 0.18.1.1-10 [27.0 kB]
-Get:58 http://mirror-ubc.debian.org/debian/ unstable/main libgettextpo-dev kfreebsd-amd64 0.18.1.1-10 [184 kB]
-Get:59 http://mirror-ubc.debian.org/debian/ unstable/main gettext kfreebsd-amd64 0.18.1.1-10 [1805 kB]
-Get:60 http://mirror-ubc.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:61 http://mirror-ubc.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:62 http://mirror-ubc.debian.org/debian/ unstable/main debhelper all 9.20130516 [708 kB]
-Get:63 http://mirror-ubc.debian.org/debian/ unstable/main libgfortran-4.7-dev kfreebsd-amd64 4.7.3-4 [439 kB]
-Get:64 http://mirror-ubc.debian.org/debian/ unstable/main gfortran-4.7 kfreebsd-amd64 4.7.3-4 [5611 kB]
-Get:65 http://mirror-ubc.debian.org/debian/ unstable/main gfortran kfreebsd-amd64 4:4.7.2-1 [1130 B]
-Get:66 http://mirror-ubc.debian.org/debian/ unstable/main libblas3 kfreebsd-amd64 1.2.20110419-5 [293 kB]
-Get:67 http://mirror-ubc.debian.org/debian/ unstable/main libblas-dev kfreebsd-amd64 1.2.20110419-5 [313 kB]
-Get:68 http://mirror-ubc.debian.org/debian/ unstable/main libbz2-dev kfreebsd-amd64 1.0.6-4 [32.8 kB]
-Get:69 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8-dev kfreebsd-amd64 8d-1 [240 kB]
-Get:70 http://mirror-ubc.debian.org/debian/ unstable/main liblapack3 kfreebsd-amd64 3.4.2+dfsg-1 [5087 kB]
-Get:71 http://mirror-ubc.debian.org/debian/ unstable/main liblapack-dev kfreebsd-amd64 3.4.2+dfsg-1 [5602 kB]
-Get:72 http://mirror-ubc.debian.org/debian/ unstable/main libtinfo-dev kfreebsd-amd64 5.9+20130504-1 [108 kB]
-Get:73 http://mirror-ubc.debian.org/debian/ unstable/main libncurses5-dev kfreebsd-amd64 5.9+20130504-1 [222 kB]
-Get:74 http://mirror-ubc.debian.org/debian/ unstable/main libpaper-utils kfreebsd-amd64 1.1.24+nmu2 [18.4 kB]
-Get:75 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3-dev kfreebsd-amd64 1:8.31-2 [356 kB]
-Get:76 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g-dev kfreebsd-amd64 1:1.2.8.dfsg-1 [217 kB]
-Get:77 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-dev kfreebsd-amd64 1.2.49-4 [267 kB]
-Get:78 http://mirror-ubc.debian.org/debian/ unstable/main libreadline6-dev kfreebsd-amd64 6.2+dfsg-0.1 [193 kB]
-Get:79 http://mirror-ubc.debian.org/debian/ unstable/main libreadline-dev kfreebsd-amd64 6.2+dfsg-0.1 [898 B]
-Get:80 http://mirror-ubc.debian.org/debian/ unstable/main zip kfreebsd-amd64 3.0-7 [335 kB]
-Get:81 http://mirror-ubc.debian.org/debian/ unstable/main unzip kfreebsd-amd64 6.0-9 [194 kB]
-Get:82 http://mirror-ubc.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:83 http://mirror-ubc.debian.org/debian/ unstable/main tcl8.5 kfreebsd-amd64 8.5.11-2 [1627 kB]
-Get:84 http://mirror-ubc.debian.org/debian/ unstable/main tk8.5 kfreebsd-amd64 8.5.11-2 [1189 kB]
-Get:85 http://mirror-ubc.debian.org/debian/ unstable/main r-base-core kfreebsd-amd64 3.0.1~20130512-1 [21.5 MB]
-Get:86 http://mirror-ubc.debian.org/debian/ unstable/main r-base-dev all 3.0.1~20130512-1 [3910 B]
+ cpp-4.8 g++-4.8 gcc-4.8 gcc-4.8-base libatomic1 libgcc-4.8-dev libgcc1
+ libgomp1 libquadmath0 libstdc++-4.8-dev libstdc++6
+11 upgraded, 95 newly installed, 0 to remove and 36 not upgraded.
+Need to get 86.4 MB/86.4 MB of archives.
+After this operation, 133 MB of additional disk space will be used.
+Get:1 http://debian.netcologne.de/debian/ unstable/main libgomp1 kfreebsd-amd64 4.8.1-8 [26.2 kB]
+Get:2 http://debian.netcologne.de/debian/ unstable/main gcc-4.8-base kfreebsd-amd64 4.8.1-8 [150 kB]
+Get:3 http://debian.netcologne.de/debian/ unstable/main libstdc++6 kfreebsd-amd64 4.8.1-8 [326 kB]
+Get:4 http://debian.netcologne.de/debian/ unstable/main libatomic1 kfreebsd-amd64 4.8.1-8 [8746 B]
+Get:5 http://debian.netcologne.de/debian/ unstable/main libquadmath0 kfreebsd-amd64 4.8.1-8 [138 kB]
+Get:6 http://debian.netcologne.de/debian/ unstable/main cpp-4.8 kfreebsd-amd64 4.8.1-8 [5770 kB]
+Get:7 http://debian.netcologne.de/debian/ unstable/main libstdc++-4.8-dev kfreebsd-amd64 4.8.1-8 [1715 kB]
+Get:8 http://debian.netcologne.de/debian/ unstable/main g++-4.8 kfreebsd-amd64 4.8.1-8 [8579 kB]
+Get:9 http://debian.netcologne.de/debian/ unstable/main gcc-4.8 kfreebsd-amd64 4.8.1-8 [6286 kB]
+Get:10 http://debian.netcologne.de/debian/ unstable/main libgcc-4.8-dev kfreebsd-amd64 4.8.1-8 [333 kB]
+Get:11 http://debian.netcologne.de/debian/ unstable/main libgcc1 kfreebsd-amd64 1:4.8.1-8 [43.3 kB]
+Get:12 http://debian.netcologne.de/debian/ unstable/main libpipeline1 kfreebsd-amd64 1.2.4-1 [41.7 kB]
+Get:13 http://debian.netcologne.de/debian/ unstable/main groff-base kfreebsd-amd64 1.22.2-3 [743 kB]
+Get:14 http://debian.netcologne.de/debian/ unstable/main bsdmainutils kfreebsd-amd64 9.0.5 [211 kB]
+Get:15 http://debian.netcologne.de/debian/ unstable/main man-db kfreebsd-amd64 2.6.5-2 [976 kB]
+Get:16 http://debian.netcologne.de/debian/ unstable/main libpcre3 kfreebsd-amd64 1:8.31-2 [247 kB]
+Get:17 http://debian.netcologne.de/debian/ unstable/main libasprintf0c2 kfreebsd-amd64 0.18.3-1 [29.8 kB]
+Get:18 http://debian.netcologne.de/debian/ unstable/main libmagic1 kfreebsd-amd64 1:5.14-2 [216 kB]
+Get:19 http://debian.netcologne.de/debian/ unstable/main libxml2 kfreebsd-amd64 2.9.1+dfsg1-2 [928 kB]
+Get:20 http://debian.netcologne.de/debian/ unstable/main libdrm2 kfreebsd-amd64 2.4.45-3 [468 kB]
+Get:21 http://debian.netcologne.de/debian/ unstable/main libxau6 kfreebsd-amd64 1:1.0.8-1 [20.9 kB]
+Get:22 http://debian.netcologne.de/debian/ unstable/main libxdmcp6 kfreebsd-amd64 1:1.1.1-1 [26.3 kB]
+Get:23 http://debian.netcologne.de/debian/ unstable/main libxcb1 kfreebsd-amd64 1.9.1-3 [50.8 kB]
+Get:24 http://debian.netcologne.de/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:25 http://debian.netcologne.de/debian/ unstable/main libx11-6 kfreebsd-amd64 2:1.6.0-1 [918 kB]
+Get:26 http://debian.netcologne.de/debian/ unstable/main libx11-xcb1 kfreebsd-amd64 2:1.6.0-1 [154 kB]
+Get:27 http://debian.netcologne.de/debian/ unstable/main libxcb-dri2-0 kfreebsd-amd64 1.9.1-3 [13.0 kB]
+Get:28 http://debian.netcologne.de/debian/ unstable/main libxcb-render0 kfreebsd-amd64 1.9.1-3 [19.0 kB]
+Get:29 http://debian.netcologne.de/debian/ unstable/main libxcb-shape0 kfreebsd-amd64 1.9.1-3 [11.4 kB]
+Get:30 http://debian.netcologne.de/debian/ unstable/main libxcb-xfixes0 kfreebsd-amd64 1.9.1-3 [15.0 kB]
+Get:31 http://debian.netcologne.de/debian/ unstable/main libegl1-mesa kfreebsd-amd64 9.1.4-1 [76.3 kB]
+Get:32 http://debian.netcologne.de/debian/ unstable/main libfreetype6 kfreebsd-amd64 2.4.9-1.1 [451 kB]
+Get:33 http://debian.netcologne.de/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:34 http://debian.netcologne.de/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:35 http://debian.netcologne.de/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:36 http://debian.netcologne.de/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:37 http://debian.netcologne.de/debian/ unstable/main libfontconfig1 kfreebsd-amd64 2.10.2-2 [321 kB]
+Get:38 http://debian.netcologne.de/debian/ unstable/main libglapi-mesa kfreebsd-amd64 9.1.4-1 [49.1 kB]
+Get:39 http://debian.netcologne.de/debian/ unstable/main libxcb-glx0 kfreebsd-amd64 1.9.1-3 [32.7 kB]
+Get:40 http://debian.netcologne.de/debian/ unstable/main libxfixes3 kfreebsd-amd64 1:5.0.1-1 [22.8 kB]
+Get:41 http://debian.netcologne.de/debian/ unstable/main libxdamage1 kfreebsd-amd64 1:1.1.4-1 [15.2 kB]
+Get:42 http://debian.netcologne.de/debian/ unstable/main libxext6 kfreebsd-amd64 2:1.3.2-1 [57.1 kB]
+Get:43 http://debian.netcologne.de/debian/ unstable/main libxxf86vm1 kfreebsd-amd64 1:1.1.2-1+deb7u1 [19.6 kB]
+Get:44 http://debian.netcologne.de/debian/ unstable/main libgl1-mesa-glx kfreebsd-amd64 9.1.4-1 [136 kB]
+Get:45 http://debian.netcologne.de/debian/ unstable/main libpixman-1-0 kfreebsd-amd64 0.30.0-3 [531 kB]
+Get:46 http://debian.netcologne.de/debian/ unstable/main libpng12-0 kfreebsd-amd64 1.2.49-4 [190 kB]
+Get:47 http://debian.netcologne.de/debian/ unstable/main libxcb-shm0 kfreebsd-amd64 1.9.1-3 [10.7 kB]
+Get:48 http://debian.netcologne.de/debian/ unstable/main libxrender1 kfreebsd-amd64 1:0.9.8-1 [33.7 kB]
+Get:49 http://debian.netcologne.de/debian/ unstable/main libcairo2 kfreebsd-amd64 1.12.14-5 [1045 kB]
+Get:50 http://debian.netcologne.de/debian/ unstable/main libffi6 kfreebsd-amd64 3.0.13-4 [21.1 kB]
+Get:51 http://debian.netcologne.de/debian/ unstable/main libglib2.0-0 kfreebsd-amd64 2.36.3-3 [2059 kB]
+Get:52 http://debian.netcologne.de/debian/ unstable/main libcroco3 kfreebsd-amd64 0.6.8-2 [134 kB]
+Get:53 http://debian.netcologne.de/debian/ unstable/main libdatrie1 kfreebsd-amd64 0.2.6-2 [30.3 kB]
+Get:54 http://debian.netcologne.de/debian/ unstable/main libgfortran3 kfreebsd-amd64 4.8.1-8 [345 kB]
+Get:55 http://debian.netcologne.de/debian/ unstable/main libgraphite2-3 kfreebsd-amd64 1.2.3-1 [73.0 kB]
+Get:56 http://debian.netcologne.de/debian/ unstable/main libharfbuzz0a kfreebsd-amd64 0.9.19-1 [441 kB]
+Get:57 http://debian.netcologne.de/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:58 http://debian.netcologne.de/debian/ unstable/main libice6 kfreebsd-amd64 2:1.0.8-2 [63.0 kB]
+Get:59 http://debian.netcologne.de/debian/ unstable/main libjpeg8 kfreebsd-amd64 8d-1 [134 kB]
+Get:60 http://debian.netcologne.de/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:61 http://debian.netcologne.de/debian/ unstable/main libthai0 kfreebsd-amd64 0.1.19-2 [43.3 kB]
+Get:62 http://debian.netcologne.de/debian/ unstable/main fontconfig kfreebsd-amd64 2.10.2-2 [376 kB]
+Get:63 http://debian.netcologne.de/debian/ unstable/main libpango-1.0-0 kfreebsd-amd64 1.32.5-5+b1 [264 kB]
+Get:64 http://debian.netcologne.de/debian/ unstable/main libpangoft2-1.0-0 kfreebsd-amd64 1.32.5-5+b1 [188 kB]
+Get:65 http://debian.netcologne.de/debian/ unstable/main libpangocairo-1.0-0 kfreebsd-amd64 1.32.5-5+b1 [175 kB]
+Get:66 http://debian.netcologne.de/debian/ unstable/main libpaper1 kfreebsd-amd64 1.1.24+nmu2 [22.1 kB]
+Get:67 http://debian.netcologne.de/debian/ unstable/main libpcrecpp0 kfreebsd-amd64 1:8.31-2 [128 kB]
+Get:68 http://debian.netcologne.de/debian/ unstable/main libsm6 kfreebsd-amd64 2:1.2.1-2 [34.2 kB]
+Get:69 http://debian.netcologne.de/debian/ unstable/main libjbig0 kfreebsd-amd64 2.0-2 [32.0 kB]
+Get:70 http://debian.netcologne.de/debian/ unstable/main libtiff5 kfreebsd-amd64 4.0.3-1 [237 kB]
+Get:71 http://debian.netcologne.de/debian/ unstable/main libunistring0 kfreebsd-amd64 0.9.3-5 [434 kB]
+Get:72 http://debian.netcologne.de/debian/ unstable/main libxft2 kfreebsd-amd64 2.3.1-1 [61.4 kB]
+Get:73 http://debian.netcologne.de/debian/ unstable/main libxss1 kfreebsd-amd64 1:1.2.2-1 [17.7 kB]
+Get:74 http://debian.netcologne.de/debian/ unstable/main libxt6 kfreebsd-amd64 1:1.1.3-1+deb7u1 [212 kB]
+Get:75 http://debian.netcologne.de/debian/ unstable/main file kfreebsd-amd64 1:5.14-2 [54.2 kB]
+Get:76 http://debian.netcologne.de/debian/ unstable/main gettext-base kfreebsd-amd64 0.18.3-1 [160 kB]
+Get:77 http://debian.netcologne.de/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:78 http://debian.netcologne.de/debian/ unstable/main gettext kfreebsd-amd64 0.18.3-1 [1886 kB]
+Get:79 http://debian.netcologne.de/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:80 http://debian.netcologne.de/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:81 http://debian.netcologne.de/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:82 http://debian.netcologne.de/debian/ unstable/main libgfortran-4.8-dev kfreebsd-amd64 4.8.1-8 [436 kB]
+Get:83 http://debian.netcologne.de/debian/ unstable/main gfortran-4.8 kfreebsd-amd64 4.8.1-8 [6100 kB]
+Get:84 http://debian.netcologne.de/debian/ unstable/main gfortran kfreebsd-amd64 4:4.8.1-2 [1144 B]
+Get:85 http://debian.netcologne.de/debian/ unstable/main libblas3 kfreebsd-amd64 1.2.20110419-5 [293 kB]
+Get:86 http://debian.netcologne.de/debian/ unstable/main libblas-dev kfreebsd-amd64 1.2.20110419-5 [313 kB]
+Get:87 http://debian.netcologne.de/debian/ unstable/main libbz2-dev kfreebsd-amd64 1.0.6-4 [32.8 kB]
+Get:88 http://debian.netcologne.de/debian/ unstable/main libjpeg8-dev kfreebsd-amd64 8d-1 [240 kB]
+Get:89 http://debian.netcologne.de/debian/ unstable/main liblapack3 kfreebsd-amd64 3.4.2+dfsg-1 [5087 kB]
+Get:90 http://debian.netcologne.de/debian/ unstable/main liblapack-dev kfreebsd-amd64 3.4.2+dfsg-1 [5602 kB]
+Get:91 http://debian.netcologne.de/debian/ unstable/main libtinfo-dev kfreebsd-amd64 5.9+20130608-1 [108 kB]
+Get:92 http://debian.netcologne.de/debian/ unstable/main libncurses5-dev kfreebsd-amd64 5.9+20130608-1 [222 kB]
+Get:93 http://debian.netcologne.de/debian/ unstable/main libpaper-utils kfreebsd-amd64 1.1.24+nmu2 [18.4 kB]
+Get:94 http://debian.netcologne.de/debian/ unstable/main libpcre3-dev kfreebsd-amd64 1:8.31-2 [356 kB]
+Get:95 http://debian.netcologne.de/debian/ unstable/main zlib1g-dev kfreebsd-amd64 1:1.2.8.dfsg-1 [217 kB]
+Get:96 http://debian.netcologne.de/debian/ unstable/main libpng12-dev kfreebsd-amd64 1.2.49-4 [267 kB]
+Get:97 http://debian.netcologne.de/debian/ unstable/main libreadline6-dev kfreebsd-amd64 6.2+dfsg-0.1 [193 kB]
+Get:98 http://debian.netcologne.de/debian/ unstable/main libreadline-dev kfreebsd-amd64 6.2+dfsg-0.1 [898 B]
+Get:99 http://debian.netcologne.de/debian/ unstable/main zip kfreebsd-amd64 3.0-7 [335 kB]
+Get:100 http://debian.netcologne.de/debian/ unstable/main unzip kfreebsd-amd64 6.0-9 [194 kB]
+Get:101 http://debian.netcologne.de/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:102 http://debian.netcologne.de/debian/ unstable/main tcl8.5 kfreebsd-amd64 8.5.14-2 [1639 kB]
+Get:103 http://debian.netcologne.de/debian/ unstable/main tk8.5 kfreebsd-amd64 8.5.14-2 [1200 kB]
+Get:104 http://debian.netcologne.de/debian/ unstable/main r-base-core kfreebsd-amd64 3.0.1-6 [21.3 MB]
+Get:105 http://debian.netcologne.de/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 61.9 MB in 1min 5s (940 kB/s)
-(Reading database ... 11405 files and directories currently installed.)
-Preparing to replace libtinfo5:kfreebsd-amd64 5.9-10 (using .../libtinfo5_5.9+20130504-1_kfreebsd-amd64.deb) ...
-Unpacking replacement libtinfo5:kfreebsd-amd64 ...
-Setting up libtinfo5:kfreebsd-amd64 (5.9+20130504-1) ...
-(Reading database ... 11405 files and directories currently installed.)
-Preparing to replace libncurses5:kfreebsd-amd64 5.9-10 (using .../libncurses5_5.9+20130504-1_kfreebsd-amd64.deb) ...
-Unpacking replacement libncurses5:kfreebsd-amd64 ...
-Setting up libncurses5:kfreebsd-amd64 (5.9+20130504-1) ...
-(Reading database ... 11405 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_kfreebsd-amd64.deb) ...
-Unpacking replacement ncurses-bin ...
-Setting up ncurses-bin (5.9+20130504-1) ...
-(Reading database ... 11403 files and directories currently installed.)
-Preparing to replace zlib1g:kfreebsd-amd64 1:1.2.7.dfsg-13 (using .../zlib1g_1%3a1.2.8.dfsg-1_kfreebsd-amd64.deb) ...
-Unpacking replacement zlib1g:kfreebsd-amd64 ...
-Setting up zlib1g:kfreebsd-amd64 (1:1.2.8.dfsg-1) ...
+Fetched 86.4 MB in 14s (6004 kB/s)
+(Reading database ... 11523 files and directories currently installed.)
+Preparing to replace libgomp1:kfreebsd-amd64 4.8.1-6 (using .../libgomp1_4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement libgomp1:kfreebsd-amd64 ...
+Preparing to replace gcc-4.8-base:kfreebsd-amd64 4.8.1-6 (using .../gcc-4.8-base_4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement gcc-4.8-base:kfreebsd-amd64 ...
+Setting up gcc-4.8-base:kfreebsd-amd64 (4.8.1-8) ...
+(Reading database ... 11523 files and directories currently installed.)
+Preparing to replace libstdc++6:kfreebsd-amd64 4.8.1-6 (using .../libstdc++6_4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement libstdc++6:kfreebsd-amd64 ...
+Preparing to replace libgcc1:kfreebsd-amd64 1:4.8.1-6 (using .../libgcc1_1%3a4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement libgcc1:kfreebsd-amd64 ...
+Setting up libgcc1:kfreebsd-amd64 (1:4.8.1-8) ...
+Setting up libstdc++6:kfreebsd-amd64 (4.8.1-8) ...
+Processing triggers for libc-bin ...
+(Reading database ... 11523 files and directories currently installed.)
+Preparing to replace libatomic1:kfreebsd-amd64 4.8.1-6 (using .../libatomic1_4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement libatomic1:kfreebsd-amd64 ...
+Preparing to replace libquadmath0:kfreebsd-amd64 4.8.1-6 (using .../libquadmath0_4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement libquadmath0:kfreebsd-amd64 ...
+Preparing to replace cpp-4.8 4.8.1-6 (using .../cpp-4.8_4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement cpp-4.8 ...
+Preparing to replace libstdc++-4.8-dev:kfreebsd-amd64 4.8.1-6 (using .../libstdc++-4.8-dev_4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement libstdc++-4.8-dev:kfreebsd-amd64 ...
+Preparing to replace g++-4.8 4.8.1-6 (using .../g++-4.8_4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement g++-4.8 ...
+Preparing to replace gcc-4.8 4.8.1-6 (using .../gcc-4.8_4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement gcc-4.8 ...
+Preparing to replace libgcc-4.8-dev:kfreebsd-amd64 4.8.1-6 (using .../libgcc-4.8-dev_4.8.1-8_kfreebsd-amd64.deb) ...
+Unpacking replacement libgcc-4.8-dev:kfreebsd-amd64 ...
Selecting previously unselected package libpipeline1:kfreebsd-amd64.
-(Reading database ... 11403 files and directories currently installed.)
-Unpacking libpipeline1:kfreebsd-amd64 (from .../libpipeline1_1.2.3-1_kfreebsd-amd64.deb) ...
+Unpacking libpipeline1:kfreebsd-amd64 (from .../libpipeline1_1.2.4-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_kfreebsd-amd64.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_kfreebsd-amd64.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_kfreebsd-amd64.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libasprintf0c2:kfreebsd-amd64.
-Unpacking libasprintf0c2:kfreebsd-amd64 (from .../libasprintf0c2_0.18.1.1-10_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libmagic1:kfreebsd-amd64.
-Unpacking libmagic1:kfreebsd-amd64 (from .../libmagic1_1%3a5.14-1_kfreebsd-amd64.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpcre3:kfreebsd-amd64.
Unpacking libpcre3:kfreebsd-amd64 (from .../libpcre3_1%3a8.31-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libasprintf0c2:kfreebsd-amd64.
+Unpacking libasprintf0c2:kfreebsd-amd64 (from .../libasprintf0c2_0.18.3-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libmagic1:kfreebsd-amd64.
+Unpacking libmagic1:kfreebsd-amd64 (from .../libmagic1_1%3a5.14-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package libxml2:kfreebsd-amd64.
-Unpacking libxml2:kfreebsd-amd64 (from .../libxml2_2.8.0+dfsg1-7+nmu1_kfreebsd-amd64.deb) ...
+Unpacking libxml2:kfreebsd-amd64 (from .../libxml2_2.9.1+dfsg1-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libdrm2:kfreebsd-amd64.
+Unpacking libdrm2:kfreebsd-amd64 (from .../libdrm2_2.4.45-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxau6:kfreebsd-amd64.
+Unpacking libxau6:kfreebsd-amd64 (from .../libxau6_1%3a1.0.8-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxdmcp6:kfreebsd-amd64.
+Unpacking libxdmcp6:kfreebsd-amd64 (from .../libxdmcp6_1%3a1.1.1-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxcb1:kfreebsd-amd64.
+Unpacking libxcb1:kfreebsd-amd64 (from .../libxcb1_1.9.1-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:kfreebsd-amd64.
+Unpacking libx11-6:kfreebsd-amd64 (from .../libx11-6_2%3a1.6.0-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libx11-xcb1:kfreebsd-amd64.
+Unpacking libx11-xcb1:kfreebsd-amd64 (from .../libx11-xcb1_2%3a1.6.0-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxcb-dri2-0:kfreebsd-amd64.
+Unpacking libxcb-dri2-0:kfreebsd-amd64 (from .../libxcb-dri2-0_1.9.1-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxcb-render0:kfreebsd-amd64.
+Unpacking libxcb-render0:kfreebsd-amd64 (from .../libxcb-render0_1.9.1-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxcb-shape0:kfreebsd-amd64.
+Unpacking libxcb-shape0:kfreebsd-amd64 (from .../libxcb-shape0_1.9.1-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxcb-xfixes0:kfreebsd-amd64.
+Unpacking libxcb-xfixes0:kfreebsd-amd64 (from .../libxcb-xfixes0_1.9.1-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libegl1-mesa:kfreebsd-amd64.
+Unpacking libegl1-mesa:kfreebsd-amd64 (from .../libegl1-mesa_9.1.4-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libfreetype6:kfreebsd-amd64.
Unpacking libfreetype6:kfreebsd-amd64 (from .../libfreetype6_2.4.9-1.1_kfreebsd-amd64.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:kfreebsd-amd64.
-Unpacking libfontconfig1:kfreebsd-amd64 (from .../libfontconfig1_2.9.0-7.1_kfreebsd-amd64.deb) ...
+Unpacking libfontconfig1:kfreebsd-amd64 (from .../libfontconfig1_2.10.2-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libglapi-mesa:kfreebsd-amd64.
+Unpacking libglapi-mesa:kfreebsd-amd64 (from .../libglapi-mesa_9.1.4-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxcb-glx0:kfreebsd-amd64.
+Unpacking libxcb-glx0:kfreebsd-amd64 (from .../libxcb-glx0_1.9.1-3_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxfixes3:kfreebsd-amd64.
+Unpacking libxfixes3:kfreebsd-amd64 (from .../libxfixes3_1%3a5.0.1-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxdamage1:kfreebsd-amd64.
+Unpacking libxdamage1:kfreebsd-amd64 (from .../libxdamage1_1%3a1.1.4-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxext6:kfreebsd-amd64.
+Unpacking libxext6:kfreebsd-amd64 (from .../libxext6_2%3a1.3.2-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxxf86vm1:kfreebsd-amd64.
+Unpacking libxxf86vm1:kfreebsd-amd64 (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:kfreebsd-amd64.
+Unpacking libgl1-mesa-glx:kfreebsd-amd64 (from .../libgl1-mesa-glx_9.1.4-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpixman-1-0:kfreebsd-amd64.
-Unpacking libpixman-1-0:kfreebsd-amd64 (from .../libpixman-1-0_0.26.0-4_kfreebsd-amd64.deb) ...
+Unpacking libpixman-1-0:kfreebsd-amd64 (from .../libpixman-1-0_0.30.0-3_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpng12-0:kfreebsd-amd64.
Unpacking libpng12-0:kfreebsd-amd64 (from .../libpng12-0_1.2.49-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxau6:kfreebsd-amd64.
-Unpacking libxau6:kfreebsd-amd64 (from .../libxau6_1%3a1.0.7-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxdmcp6:kfreebsd-amd64.
-Unpacking libxdmcp6:kfreebsd-amd64 (from .../libxdmcp6_1%3a1.1.1-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxcb1:kfreebsd-amd64.
-Unpacking libxcb1:kfreebsd-amd64 (from .../libxcb1_1.8.1-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:kfreebsd-amd64.
-Unpacking libx11-6:kfreebsd-amd64 (from .../libx11-6_2%3a1.5.0-1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxcb-render0:kfreebsd-amd64.
-Unpacking libxcb-render0:kfreebsd-amd64 (from .../libxcb-render0_1.8.1-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package libxcb-shm0:kfreebsd-amd64.
-Unpacking libxcb-shm0:kfreebsd-amd64 (from .../libxcb-shm0_1.8.1-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxext6:kfreebsd-amd64.
-Unpacking libxext6:kfreebsd-amd64 (from .../libxext6_2%3a1.3.1-2_kfreebsd-amd64.deb) ...
+Unpacking libxcb-shm0:kfreebsd-amd64 (from .../libxcb-shm0_1.9.1-3_kfreebsd-amd64.deb) ...
Selecting previously unselected package libxrender1:kfreebsd-amd64.
-Unpacking libxrender1:kfreebsd-amd64 (from .../libxrender1_1%3a0.9.7-1_kfreebsd-amd64.deb) ...
+Unpacking libxrender1:kfreebsd-amd64 (from .../libxrender1_1%3a0.9.8-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libcairo2:kfreebsd-amd64.
-Unpacking libcairo2:kfreebsd-amd64 (from .../libcairo2_1.12.14-4_kfreebsd-amd64.deb) ...
+Unpacking libcairo2:kfreebsd-amd64 (from .../libcairo2_1.12.14-5_kfreebsd-amd64.deb) ...
Selecting previously unselected package libffi6:kfreebsd-amd64.
Unpacking libffi6:kfreebsd-amd64 (from .../libffi6_3.0.13-4_kfreebsd-amd64.deb) ...
Selecting previously unselected package libglib2.0-0:kfreebsd-amd64.
-Unpacking libglib2.0-0:kfreebsd-amd64 (from .../libglib2.0-0_2.36.1-2build1_kfreebsd-amd64.deb) ...
+Unpacking libglib2.0-0:kfreebsd-amd64 (from .../libglib2.0-0_2.36.3-3_kfreebsd-amd64.deb) ...
Selecting previously unselected package libcroco3:kfreebsd-amd64.
Unpacking libcroco3:kfreebsd-amd64 (from .../libcroco3_0.6.8-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package libdatrie1:kfreebsd-amd64.
Unpacking libdatrie1:kfreebsd-amd64 (from .../libdatrie1_0.2.6-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libunistring0:kfreebsd-amd64.
-Unpacking libunistring0:kfreebsd-amd64 (from .../libunistring0_0.9.3-5_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libgettextpo0:kfreebsd-amd64.
-Unpacking libgettextpo0:kfreebsd-amd64 (from .../libgettextpo0_0.18.1.1-10_kfreebsd-amd64.deb) ...
Selecting previously unselected package libgfortran3:kfreebsd-amd64.
-Unpacking libgfortran3:kfreebsd-amd64 (from .../libgfortran3_4.8.0-7_kfreebsd-amd64.deb) ...
+Unpacking libgfortran3:kfreebsd-amd64 (from .../libgfortran3_4.8.1-8_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libgraphite2-3:kfreebsd-amd64.
+Unpacking libgraphite2-3:kfreebsd-amd64 (from .../libgraphite2-3_1.2.3-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libharfbuzz0a:kfreebsd-amd64.
+Unpacking libharfbuzz0a:kfreebsd-amd64 (from .../libharfbuzz0a_0.9.19-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:kfreebsd-amd64.
@@ -546,12 +434,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:kfreebsd-amd64.
Unpacking libthai0:kfreebsd-amd64 (from .../libthai0_0.1.19-2_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libxft2:kfreebsd-amd64.
-Unpacking libxft2:kfreebsd-amd64 (from .../libxft2_2.3.1-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libpango1.0-0:kfreebsd-amd64.
-Unpacking libpango1.0-0:kfreebsd-amd64 (from .../libpango1.0-0_1.30.0-1_kfreebsd-amd64.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libpango-1.0-0:kfreebsd-amd64.
+Unpacking libpango-1.0-0:kfreebsd-amd64 (from .../libpango-1.0-0_1.32.5-5+b1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:kfreebsd-amd64.
+Unpacking libpangoft2-1.0-0:kfreebsd-amd64 (from .../libpangoft2-1.0-0_1.32.5-5+b1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:kfreebsd-amd64.
+Unpacking libpangocairo-1.0-0:kfreebsd-amd64 (from .../libpangocairo-1.0-0_1.32.5-5+b1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpaper1:kfreebsd-amd64.
Unpacking libpaper1:kfreebsd-amd64 (from .../libpaper1_1.1.24+nmu2_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpcrecpp0:kfreebsd-amd64.
@@ -561,37 +451,35 @@ Unpacking libsm6:kfreebsd-amd64 (from .../libsm6_2%3a1.2.1-2_kfreebsd-amd64.deb)
Selecting previously unselected package libjbig0:kfreebsd-amd64.
Unpacking libjbig0:kfreebsd-amd64 (from .../libjbig0_2.0-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package libtiff5:kfreebsd-amd64.
-Unpacking libtiff5:kfreebsd-amd64 (from .../libtiff5_4.0.2-6_kfreebsd-amd64.deb) ...
+Unpacking libtiff5:kfreebsd-amd64 (from .../libtiff5_4.0.3-1_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libunistring0:kfreebsd-amd64.
+Unpacking libunistring0:kfreebsd-amd64 (from .../libunistring0_0.9.3-5_kfreebsd-amd64.deb) ...
+Selecting previously unselected package libxft2:kfreebsd-amd64.
+Unpacking libxft2:kfreebsd-amd64 (from .../libxft2_2.3.1-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libxss1:kfreebsd-amd64.
Unpacking libxss1:kfreebsd-amd64 (from .../libxss1_1%3a1.2.2-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libxt6:kfreebsd-amd64.
-Unpacking libxt6:kfreebsd-amd64 (from .../libxt6_1%3a1.1.3-1_kfreebsd-amd64.deb) ...
+Unpacking libxt6:kfreebsd-amd64 (from .../libxt6_1%3a1.1.3-1+deb7u1_kfreebsd-amd64.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_kfreebsd-amd64.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_kfreebsd-amd64.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libasprintf-dev:kfreebsd-amd64.
-Unpacking libasprintf-dev:kfreebsd-amd64 (from .../libasprintf-dev_0.18.1.1-10_kfreebsd-amd64.deb) ...
-Selecting previously unselected package libgettextpo-dev:kfreebsd-amd64.
-Unpacking libgettextpo-dev:kfreebsd-amd64 (from .../libgettextpo-dev_0.18.1.1-10_kfreebsd-amd64.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_kfreebsd-amd64.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
-Selecting previously unselected package libgfortran-4.7-dev:kfreebsd-amd64.
-Unpacking libgfortran-4.7-dev:kfreebsd-amd64 (from .../libgfortran-4.7-dev_4.7.3-4_kfreebsd-amd64.deb) ...
-Selecting previously unselected package gfortran-4.7.
-Unpacking gfortran-4.7 (from .../gfortran-4.7_4.7.3-4_kfreebsd-amd64.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Selecting previously unselected package libgfortran-4.8-dev:kfreebsd-amd64.
+Unpacking libgfortran-4.8-dev:kfreebsd-amd64 (from .../libgfortran-4.8-dev_4.8.1-8_kfreebsd-amd64.deb) ...
+Selecting previously unselected package gfortran-4.8.
+Unpacking gfortran-4.8 (from .../gfortran-4.8_4.8.1-8_kfreebsd-amd64.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.7.2-1_kfreebsd-amd64.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.8.1-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_kfreebsd-amd64.deb) ...
Selecting previously unselected package libblas-dev.
@@ -605,9 +493,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libtinfo-dev:kfreebsd-amd64.
-Unpacking libtinfo-dev:kfreebsd-amd64 (from .../libtinfo-dev_5.9+20130504-1_kfreebsd-amd64.deb) ...
+Unpacking libtinfo-dev:kfreebsd-amd64 (from .../libtinfo-dev_5.9+20130608-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libncurses5-dev:kfreebsd-amd64.
-Unpacking libncurses5-dev:kfreebsd-amd64 (from .../libncurses5-dev_5.9+20130504-1_kfreebsd-amd64.deb) ...
+Unpacking libncurses5-dev:kfreebsd-amd64 (from .../libncurses5-dev_5.9+20130608-1_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_kfreebsd-amd64.deb) ...
Selecting previously unselected package libpcre3-dev:kfreebsd-amd64.
@@ -627,82 +515,105 @@ Unpacking unzip (from .../unzip_6.0-9_kfreebsd-amd64.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_kfreebsd-amd64.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_kfreebsd-amd64.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_kfreebsd-amd64.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1~20130512-1_kfreebsd-amd64.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_kfreebsd-amd64.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1~20130512-1_all.deb) ...
-Setting up libpipeline1:kfreebsd-amd64 (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:kfreebsd-amd64 (4.8.1-8) ...
+Setting up libatomic1:kfreebsd-amd64 (4.8.1-8) ...
+Setting up libquadmath0:kfreebsd-amd64 (4.8.1-8) ...
+Setting up cpp-4.8 (4.8.1-8) ...
+Setting up libgcc-4.8-dev:kfreebsd-amd64 (4.8.1-8) ...
+Setting up libstdc++-4.8-dev:kfreebsd-amd64 (4.8.1-8) ...
+Setting up gcc-4.8 (4.8.1-8) ...
+Setting up g++-4.8 (4.8.1-8) ...
+Setting up libpipeline1:kfreebsd-amd64 (1.2.4-1) ...
+Setting up groff-base (1.22.2-3) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
-Setting up man-db (2.6.3-6) ...
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:kfreebsd-amd64 (0.18.1.1-10) ...
-Setting up libmagic1:kfreebsd-amd64 (1:5.14-1) ...
Setting up libpcre3:kfreebsd-amd64 (1:8.31-2) ...
-Setting up libxml2:kfreebsd-amd64 (2.8.0+dfsg1-7+nmu1) ...
+Setting up libasprintf0c2:kfreebsd-amd64 (0.18.3-1) ...
+Setting up libmagic1:kfreebsd-amd64 (1:5.14-2) ...
+Setting up libxml2:kfreebsd-amd64 (2.9.1+dfsg1-2) ...
+Setting up libdrm2:kfreebsd-amd64 (2.4.45-3) ...
+Setting up libxau6:kfreebsd-amd64 (1:1.0.8-1) ...
+Setting up libxdmcp6:kfreebsd-amd64 (1:1.1.1-1) ...
+Setting up libxcb1:kfreebsd-amd64 (1.9.1-3) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:kfreebsd-amd64 (2:1.6.0-1) ...
+Setting up libx11-xcb1:kfreebsd-amd64 (2:1.6.0-1) ...
+Setting up libxcb-dri2-0:kfreebsd-amd64 (1.9.1-3) ...
+Setting up libxcb-render0:kfreebsd-amd64 (1.9.1-3) ...
+Setting up libxcb-shape0:kfreebsd-amd64 (1.9.1-3) ...
+Setting up libxcb-xfixes0:kfreebsd-amd64 (1.9.1-3) ...
+Setting up libegl1-mesa:kfreebsd-amd64 (9.1.4-1) ...
Setting up libfreetype6:kfreebsd-amd64 (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:kfreebsd-amd64 (2.9.0-7.1) ...
-Setting up libpixman-1-0:kfreebsd-amd64 (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:kfreebsd-amd64 (2.10.2-2) ...
+Setting up libglapi-mesa:kfreebsd-amd64 (9.1.4-1) ...
+Setting up libxcb-glx0:kfreebsd-amd64 (1.9.1-3) ...
+Setting up libxfixes3:kfreebsd-amd64 (1:5.0.1-1) ...
+Setting up libxdamage1:kfreebsd-amd64 (1:1.1.4-1) ...
+Setting up libxext6:kfreebsd-amd64 (2:1.3.2-1) ...
+Setting up libxxf86vm1:kfreebsd-amd64 (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:kfreebsd-amd64 (9.1.4-1) ...
+Setting up libpixman-1-0:kfreebsd-amd64 (0.30.0-3) ...
Setting up libpng12-0:kfreebsd-amd64 (1.2.49-4) ...
-Setting up libxau6:kfreebsd-amd64 (1:1.0.7-1) ...
-Setting up libxdmcp6:kfreebsd-amd64 (1:1.1.1-1) ...
-Setting up libxcb1:kfreebsd-amd64 (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:kfreebsd-amd64 (2:1.5.0-1) ...
-Setting up libxcb-render0:kfreebsd-amd64 (1.8.1-2) ...
-Setting up libxcb-shm0:kfreebsd-amd64 (1.8.1-2) ...
-Setting up libxext6:kfreebsd-amd64 (2:1.3.1-2) ...
-Setting up libxrender1:kfreebsd-amd64 (1:0.9.7-1) ...
-Setting up libcairo2:kfreebsd-amd64 (1.12.14-4) ...
+Setting up libxcb-shm0:kfreebsd-amd64 (1.9.1-3) ...
+Setting up libxrender1:kfreebsd-amd64 (1:0.9.8-1) ...
+Setting up libcairo2:kfreebsd-amd64 (1.12.14-5) ...
Setting up libffi6:kfreebsd-amd64 (3.0.13-4) ...
-Setting up libglib2.0-0:kfreebsd-amd64 (2.36.1-2build1) ...
+Setting up libglib2.0-0:kfreebsd-amd64 (2.36.3-3) ...
No schema files found: doing nothing.
Setting up libcroco3:kfreebsd-amd64 (0.6.8-2) ...
Setting up libdatrie1:kfreebsd-amd64 (0.2.6-2) ...
-Setting up libunistring0:kfreebsd-amd64 (0.9.3-5) ...
-Setting up libgettextpo0:kfreebsd-amd64 (0.18.1.1-10) ...
-Setting up libgfortran3:kfreebsd-amd64 (4.8.0-7) ...
+Setting up libgfortran3:kfreebsd-amd64 (4.8.1-8) ...
+Setting up libgraphite2-3:kfreebsd-amd64 (1.2.3-1) ...
+Setting up libharfbuzz0a:kfreebsd-amd64 (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
-Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix.
+All runlevel operations denied by policy
+invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6:kfreebsd-amd64 (2:1.0.8-2) ...
Setting up libjpeg8:kfreebsd-amd64 (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:kfreebsd-amd64 (0.1.19-2) ...
-Setting up libxft2:kfreebsd-amd64 (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:kfreebsd-amd64 (1.30.0-1) ...
+Setting up libpango-1.0-0:kfreebsd-amd64 (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:kfreebsd-amd64 (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:kfreebsd-amd64 (1.32.5-5+b1) ...
Setting up libpaper1:kfreebsd-amd64 (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:kfreebsd-amd64 (1:8.31-2) ...
Setting up libsm6:kfreebsd-amd64 (2:1.2.1-2) ...
Setting up libjbig0:kfreebsd-amd64 (2.0-2) ...
-Setting up libtiff5:kfreebsd-amd64 (4.0.2-6) ...
+Setting up libtiff5:kfreebsd-amd64 (4.0.3-1) ...
+Setting up libunistring0:kfreebsd-amd64 (0.9.3-5) ...
+Setting up libxft2:kfreebsd-amd64 (2.3.1-1) ...
Setting up libxss1:kfreebsd-amd64 (1:1.2.2-1) ...
-Setting up libxt6:kfreebsd-amd64 (1:1.1.3-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libasprintf-dev:kfreebsd-amd64 (0.18.1.1-10) ...
-Setting up libgettextpo-dev:kfreebsd-amd64 (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:kfreebsd-amd64 (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up libgfortran-4.7-dev:kfreebsd-amd64 (4.7.3-4) ...
-Setting up gfortran-4.7 (4.7.3-4) ...
-Setting up gfortran (4:4.7.2-1) ...
+Setting up debhelper (9.20130630) ...
+Setting up libgfortran-4.8-dev:kfreebsd-amd64 (4.8.1-8) ...
+Setting up gfortran-4.8 (4.8.1-8) ...
+Setting up gfortran (4:4.8.1-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -714,8 +625,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:kfreebsd-amd64 (5.9+20130504-1) ...
-Setting up libncurses5-dev:kfreebsd-amd64 (5.9+20130504-1) ...
+Setting up libtinfo-dev:kfreebsd-amd64 (5.9+20130608-1) ...
+Setting up libncurses5-dev:kfreebsd-amd64 (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:kfreebsd-amd64 (1:8.31-2) ...
Setting up zlib1g-dev:kfreebsd-amd64 (1:1.2.8.dfsg-1) ...
@@ -725,23 +636,24 @@ Setting up libreadline-dev:kfreebsd-amd64 (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1~20130512-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1~20130512-1) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 15 not upgraded.
-Checking correctness of dependencies...
-Kernel: GNU/kFreeBSD 8.1-1-amd64 kfreebsd-amd64 (x86_64)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.7_4.7.3-4 gcc-4.7_4.7.3-4 kfreebsd-kernel-headers_0.83 libc0.1-dev_2.17-3 libstdc++6_4.8.0-7 libstdc++6-4.7-dev_4.7.3-4
-Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.13-3.3 cpp_4:4.7.2-1 cpp-4.7_4.7.3-4 dash_0.5.7-3 debconf_1.5.49 debconf-i18n_1.5.49 debhelper_9.20130516 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1:5.14-1 findutils_4.4.2-5 fo [...]
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
+Processing triggers for libc-bin ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: GNU/kFreeBSD 9.0-2-amd64 kfreebsd-amd64 (x86_64)
+Toolchain package versions: binutils_2.23.52.20130620-1 dpkg-dev_1.16.10 g++-4.8_4.8.1-8 gcc-4.8_4.8.1-8 kfreebsd-kernel-headers_9.0-3 libc0.1-dev_2.17-7 libstdc++-4.8-dev_4.8.1-8 libstdc++6_4.8.1-8
+Package versions: apt_0.9.9 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130620-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.13-3.3 cpp_4:4.8.1-2 cpp-4.8_4.8.1-8 dash_0.5.7-3 debconf_1.5.50 debconf-i18n_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1 [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -751,28 +663,46 @@ Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-1
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+DEB_BUILD_OPTIONS=parallel=2
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-kfreebsd-amd64-sbuild
+SCHROOT_CHROOT_NAME=sid-ka-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-ka-sbuild-1375609089-49458
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture kfreebsd-amd64
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -788,7 +718,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -807,26 +737,28 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1~20130512-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O2 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
+ double abstol = -1e500; // infinity
+ ^
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -836,13 +768,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-b
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -850,7 +782,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -886,9 +818,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -919,79 +851,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_kfreebsd-amd64.deb'.
- dpkg-genchanges -B -mkfreebsd-amd64 Build Daemon (fano) <buildd_kfreebsd-amd64-fano at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_kfreebsd-amd64.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_kfreebsd-amd64.deb'.
+ dpkg-genchanges -B -mkfreebsd-amd64 Build Daemon (fayrfax) <buildd_kfreebsd-amd64-fayrfax at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_kfreebsd-amd64.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1252
+Build finished at 20130804-0939
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_kfreebsd-amd64.changes:
+──────────────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_kfreebsd-amd64.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: kfreebsd-amd64
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: kfreebsd-amd64 Build Daemon (fano) <buildd_kfreebsd-amd64-fano at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: kfreebsd-amd64 Build Daemon (fayrfax) <buildd_kfreebsd-amd64-fayrfax at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
- .
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- 9e2cdb506a59ed00fdbe7fcbe46d1334b97ec531 1619198 r-bioc-limma_3.16.3~dfsg-1_kfreebsd-amd64.deb
+ 5131a7101da9a56deb9c3ae5b4b8d6253d34dacc 864272 r-bioc-limma_3.16.7~dfsg-1_kfreebsd-amd64.deb
Checksums-Sha256:
- 76d06838787c17ae7b1cf2776aaef3c598d6925ea535f24f9d081f815cd28fcc 1619198 r-bioc-limma_3.16.3~dfsg-1_kfreebsd-amd64.deb
+ d485dc6153c87d6a98090e8838321ea7847b04e69a47f20743d9500a7a03e8e8 864272 r-bioc-limma_3.16.7~dfsg-1_kfreebsd-amd64.deb
Files:
- d269271c5a342b53001c33169e3eb840 1619198 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_kfreebsd-amd64.deb
+ ebca962790f40c2db4f0a32d870f3367 864272 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_kfreebsd-amd64.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_kfreebsd-amd64.deb
+r-bioc-limma_3.16.7~dfsg-1_kfreebsd-amd64.deb
─────────────────────────────────────────────
new debian package, version 2.0.
- size 1619198 bytes: control archive= 1682 bytes.
- 793 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ size 864272 bytes: control archive=1639 bytes.
+ 784 bytes, 16 lines control
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: kfreebsd-amd64
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1790
- Depends: libc0.1 (>= 2.3), r-base-core (>= 3.0.1~20130512-1)
+ Installed-Size: 1001
+ Depends: libc0.1 (>= 2.3), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -1003,89 +932,91 @@ r-bioc-limma_3.16.3~dfsg-1_kfreebsd-amd64.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 2046 2013-05-17 12:52 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 990 2013-05-17 12:52 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 1072 2013-05-17 12:52 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6375 2013-05-17 12:52 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5944 2013-05-17 12:52 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 3089 2013-05-17 12:52 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 219 2013-05-17 12:52 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 541 2013-05-17 12:52 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10992 2013-05-17 12:52 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 1056 2013-05-17 12:52 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 206558 2013-05-17 12:52 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 4112 2013-05-17 12:52 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 102936 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 673 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 1711 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 45597 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 806089 2013-05-17 12:52 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 963 2013-05-17 12:52 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 11214 2013-05-17 12:52 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1418 2013-05-17 12:52 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 496642 2013-05-17 12:52 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3426 2013-05-17 12:52 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6703 2013-05-17 12:52 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2567 2013-05-17 12:52 ./usr/lib/R/site-library/limma/help/aliases.rds
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 37337 2013-05-17 12:52 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2013-05-17 12:52 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 10085 2013-05-17 12:52 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/share/doc/r-bioc-limma/
-drwxr-xr-x root/root 0 2013-05-17 12:52 ./usr/share/doc/r-bioc-limma/tests/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 2095 2013-08-04 09:39 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 969 2013-08-04 09:39 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 1058 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 6386 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5952 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 3098 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 219 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 542 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 10712 2013-08-04 09:39 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 1056 2013-08-04 09:39 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 207871 2013-08-04 09:39 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 4126 2013-08-04 09:39 ./usr/lib/R/site-library/limma/R/limma.rdx
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 104280 2013-08-04 09:39 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 673 2013-08-04 09:39 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 1711 2013-08-04 09:39 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 45597 2013-08-04 09:39 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 963 2013-08-04 09:39 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 11214 2013-08-04 09:39 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1394 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 492976 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3434 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 6742 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 2577 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/aliases.rds
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 37564 2013-08-04 09:39 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2013-08-04 09:39 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 10085 2013-08-04 09:39 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/share/doc/r-bioc-limma/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ka-sbuild-1368794888-61242/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-amd64-Cz6ptv
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: kfreebsd-amd64
-Build-Space: 5580
-Build-Time: 25
+Build Architecture: kfreebsd-amd64
+Build-Space: 3214
+Build-Time: 16
Distribution: sid
-Install-Time: 202
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: kfreebsd-amd64
+Install-Time: 44
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: kfreebsd-amd64
Package: r-bioc-limma
-Package-Time: 275
-Source-Version: 3.16.3~dfsg-1
-Space: 5580
+Package-Time: 95
+Source-Version: 3.16.7~dfsg-1
+Space: 3214
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1252
-Build needed 00:04:35, 5580k disc space
-Signature with key '1B08409D' requested:
+Finished at 20130804-0939
+Build needed 00:01:35, 3214k disc space
+Signature with key 'A2010D5E' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_kfreebsd-amd64.changes A2010D5E
+
+Successfully signed changes file
diff --git a/kfreebsd-i386.log b/kfreebsd-i386.log
index 0094719..550ab9d 100644
--- a/kfreebsd-i386.log
+++ b/kfreebsd-i386.log
@@ -1,62 +1,74 @@
-From buildd at finzi.debian.org Fri May 17 13:06:19 2013
+From buildd at finzi.debian.org Sun Aug 04 09:39:32 2013
Return-path: <buildd at finzi.debian.org>
-Received: from mailly.debian.org ([82.195.75.114])
+Received: from mailly.debian.org ([2001:41b8:202:deb:6564:a62:52c3:4b72])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=mailly.debian.org, EMAIL=hostmaster at mailly.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
(Exim 4.72) (envelope-from <buildd at finzi.debian.org>)
- id 1UdKMV-0007CO-LY
- for logs at buildd.debian.org; Fri, 17 May 2013 13:06:19 +0000
-Received: from finzi.debian.org ([206.12.19.111])
+ id 1V5umi-0000yA-Mu
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 09:39:32 +0000
+Received: from finzi.debian.org ([2607:f8f0:610:4000:6564:a62:19:111])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=finzi.debian.org, EMAIL=hostmaster at finzi.debian.org (verified)
- by mailly.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:256)
+ by mailly.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
(Exim 4.80) (envelope-from <buildd at finzi.debian.org>)
- id 1UdKMU-0008IX-5E; Fri, 17 May 2013 13:06:18 +0000
-Received: from buildd by finzi.debian.org with local (Exim 4.72)
+ id 1V5umh-0006Pz-AX; Sun, 04 Aug 2013 09:39:31 +0000
+Received: from buildd by finzi.debian.org with local (Exim 4.80)
(envelope-from <buildd at finzi.debian.org>)
- id 1UdKMQ-000D35-Mf; Fri, 17 May 2013 13:06:16 +0000
-Message-Id: <E1UdKMQ-000D35-Mf at finzi.debian.org>
-MIME-Version: 1.0
+ id 1V5umf-000NCu-2I; Sun, 04 Aug 2013 09:39:29 +0000
Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Fri, 17 May 2013 13:06:14 +0000
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 09:39:28 +0000
From: buildd on finzi <buildd at finzi.debian.org>
-To: logs at buildd.debian.org,christoph at debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on
+To: christoph at debian.org,logs at buildd.debian.org
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on
kfreebsd-i386 (dist=sid)
Key-Id: B31C365A
+Message-Id: <E1V5umf-000NCu-2I at finzi.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on finzi.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on finzi.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (kfreebsd-i386) 17 May 2013 13:03 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (kfreebsd-i386) 04 Aug 2013 09:36 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: kfreebsd-i386
-Get:1 http://incoming.debian.org unstable InRelease [205 kB]
-Get:2 http://mirror-ubc.debian.org unstable InRelease [205 kB]
-Get:3 http://mirror-ubc.debian.org unstable/main Sources [6729 kB]
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: kfreebsd-i386
+Host Architecture: kfreebsd-i386
+Build Architecture: kfreebsd-i386
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-KM1t9q/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-KM1t9q' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-ki-sbuild-1375608984-85762' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://mirror-ubc.debian.org unstable InRelease [204 kB]
+Get:2 http://mirror-ubc.debian.org unstable/main Sources [8616 kB]
+Get:3 http://incoming.debian.org unstable InRelease [204 kB]
Get:4 http://incoming.debian.org buildd-unstable InRelease [111 kB]
-Get:5 http://incoming.debian.org unstable/main Sources [6729 kB]
-Get:6 http://mirror-ubc.debian.org unstable/contrib Sources [53.7 kB]
-Get:7 http://mirror-ubc.debian.org unstable/non-free Sources [103 kB]
-Get:8 http://mirror-ubc.debian.org unstable/main kfreebsd-i386 Packages [5907 kB]
-Get:9 http://mirror-ubc.debian.org unstable/contrib kfreebsd-i386 Packages [36.7 kB]
-Get:10 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:11 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:12 http://incoming.debian.org unstable/main kfreebsd-i386 Packages [5907 kB]
-Get:13 http://incoming.debian.org unstable/contrib kfreebsd-i386 Packages [36.7 kB]
-Get:14 http://incoming.debian.org buildd-unstable/main Sources [101 kB]
-Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [873 B]
-Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2683 B]
-Get:17 http://incoming.debian.org buildd-unstable/main kfreebsd-i386 Packages [58.0 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib kfreebsd-i386 Packages [14 B]
-Fetched 26.3 MB in 17s (1490 kB/s)
+Get:5 http://incoming.debian.org unstable/main Sources [8616 kB]
+Get:6 http://mirror-ubc.debian.org unstable/contrib Sources [65.0 kB]
+Get:7 http://mirror-ubc.debian.org unstable/non-free Sources [126 kB]
+Get:8 http://mirror-ubc.debian.org unstable/main kfreebsd-i386 Packages [7777 kB]
+Get:9 http://mirror-ubc.debian.org unstable/contrib kfreebsd-i386 Packages [44.1 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [65.0 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [126 kB]
+Get:12 http://incoming.debian.org unstable/main kfreebsd-i386 Packages [7777 kB]
+Get:13 http://incoming.debian.org unstable/contrib kfreebsd-i386 Packages [44.1 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [123 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [680 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2595 B]
+Get:17 http://incoming.debian.org buildd-unstable/main kfreebsd-i386 Packages [91.5 kB]
+Get:18 http://incoming.debian.org buildd-unstable/contrib kfreebsd-i386 Packages [20 B]
+Fetched 34.0 MB in 11s (2860 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -76,360 +88,341 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://mirror-ubc.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://mirror-ubc.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://mirror-ubc.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 0s (1924 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 0s (371 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-05eGe9/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: missing
-Checking for dependency conflicts...
-Installing positive dependencies: fakeroot
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
- fakeroot
-0 upgraded, 1 newly installed, 0 to remove and 30 not upgraded.
-Need to get 109 kB of archives.
-After this operation, 231 kB of additional disk space will be used.
-Get:1 http://mirror-ubc.debian.org/debian/ unstable/main fakeroot kfreebsd-i386 1.18.4-2 [109 kB]
+ sbuild-build-depends-core-dummy
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 109 kB in 0s (5451 kB/s)
-Selecting previously unselected package fakeroot.
-(Reading database ... 11247 files and directories currently installed.)
-Unpacking fakeroot (from .../fakeroot_1.18.4-2_kfreebsd-i386.deb) ...
-Setting up fakeroot (1.18.4-2) ...
-update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
-Removing negative dependencies:
+0 upgraded, 1 newly installed, 0 to remove and 47 not upgraded.
+Need to get 0 B/716 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 11336 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, freebsd-utils, grep, gzip, hostname, libc-bin, login, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, freebsd-utils, grep, gzip, hostname, libc-bin, login, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-D0kR9m/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 30 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, freebsd-utils, grep, gzip, hostname, libc-bin, login, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.2)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-1)
-bsdutils: already installed (1:2.20.1-5.3)
-coreutils: already installed (8.13-3.3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-freebsd-utils: already installed (9.0+ds1-11)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.13-38)
-login: already installed (1:4.1.5.1-1)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-21)
-sed: already installed (4.2.1-10)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-5)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (~*=PROVIDED=*=)
-gcc: already installed (4:4.7.2-1 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.7.2-1 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130516
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils cpp-4.7 file fontconfig fontconfig-config fonts-dejavu-core
- g++-4.7 gcc-4.7 gcc-4.7-base gcc-4.8-base gettext gettext-base gfortran
- gfortran-4.7 groff-base html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libc-dev-bin libc0.1
- libc0.1-dev libcairo2 libcroco3 libdatrie1 libffi6 libfontconfig1
- libfreetype6 libgcc-4.7-dev libgcc1 libgettextpo-dev libgettextpo0
- libgfortran-4.7-dev libgfortran3 libglib2.0-0 libgomp1 libice6 libjbig0
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5
- libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
- libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libquadmath0
- libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.7-dev
- libthai-data libthai0 libtiff5 libtinfo-dev libtinfo5 libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
- r-base-core tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
- zlib1g-dev
+ bsdmainutils cdbs cpp-4.8 debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core g++-4.8 gcc-4.8 gcc-4.8-base gettext gettext-base gfortran
+ gfortran-4.8 groff-base intltool-debian libasprintf0c2 libatomic1
+ libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libdrm2
+ libegl1-mesa libffi6 libfontconfig1 libfreetype6 libgcc-4.8-dev libgcc1
+ libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0
+ libgomp1 libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3
+ libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libquadmath0 libreadline-dev libreadline6-dev libsm6 libstdc++-4.8-dev
+ libstdc++6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0
+ libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0
+ libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1
+ libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6
+ libxxf86vm1 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5
+ ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.7-locales dh-make
- gcc-4.7-doc libstdc++6-4.7-dbg libmudflap0-4.7-dev libgcc1-dbg libgomp1-dbg
- libitm1-dbg libquadmath0-dbg libmudflap0-dbg gettext-doc gfortran-doc
- gfortran-4.7-doc libgfortran3-dbg groff glibc-doc ncurses-doc ttf-baekmuk
- ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp libstdc++6-4.7-doc less www-browser libmail-box-perl
- r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ wamerican wordlist whois vacation devscripts gcc-4.8-locales dh-make
+ gcc-4.8-doc libstdc++6-4.8-dbg libmudflap0-4.8-dev libgcc1-dbg libgomp1-dbg
+ libitm1-dbg libatomic1-dbg libasan0-dbg libtsan0-dbg libbacktrace1-dbg
+ libquadmath0-dbg libmudflap0-dbg gettext-doc gfortran-doc gfortran-4.8-doc
+ libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
+ ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp
+ libstdc++-4.8-doc less www-browser libmail-box-perl r-doc-info r-doc-pdf
+ r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint manpages-dev libc0.1-i686
- libglib2.0-data shared-mime-info xml-core libmail-sendmail-perl
- r-recommended r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl
- libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
- fonts-dejavu-core gettext gettext-base gfortran gfortran-4.7 groff-base
- html2text intltool-debian libasprintf-dev libasprintf0c2 libblas-dev
- libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libffi6 libfontconfig1
- libfreetype6 libgettextpo-dev libgettextpo0 libgfortran-4.7-dev libgfortran3
- libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3
- libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3
- libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
- libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
- libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
- libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core
- ucf unzip x11-common xdg-utils zip zlib1g-dev
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libffi6 libfontconfig1
+ libfreetype6 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx libglapi-mesa
+ libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
+ libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
+ libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data
+ libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6 libx11-data
+ libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0 libxcb-render0 libxcb-shape0
+ libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3
+ libxft2 libxml2 libxrender1 libxss1 libxt6 libxxf86vm1 man-db po-debconf
+ r-base-core r-base-dev sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5
+ ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.7 g++-4.7 gcc-4.7 gcc-4.7-base gcc-4.8-base libc-dev-bin libc0.1
- libc0.1-dev libgcc-4.7-dev libgcc1 libgomp1 libncurses5 libquadmath0
- libstdc++6 libstdc++6-4.7-dev libtinfo5 ncurses-bin
-17 upgraded, 82 newly installed, 0 to remove and 13 not upgraded.
-Need to get 82.3 MB of archives.
-After this operation, 118 MB of additional disk space will be used.
-Get:1 http://mirror-ubc.debian.org/debian/ unstable/main libc0.1-dev kfreebsd-i386 2.17-3 [2132 kB]
-Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libcroco3 kfreebsd-i386 0.6.8-2 [134 kB]
-Get:3 http://mirror-ubc.debian.org/debian/ unstable/main libc-dev-bin kfreebsd-i386 2.17-3 [229 kB]
-Get:4 http://mirror-ubc.debian.org/debian/ unstable/main libgomp1 kfreebsd-i386 4.8.0-7 [28.3 kB]
-Get:5 http://mirror-ubc.debian.org/debian/ unstable/main gcc-4.8-base kfreebsd-i386 4.8.0-7 [148 kB]
-Get:6 http://mirror-ubc.debian.org/debian/ unstable/main libgcc1 kfreebsd-i386 1:4.8.0-7 [52.8 kB]
-Get:7 http://mirror-ubc.debian.org/debian/ unstable/main libquadmath0 kfreebsd-i386 4.8.0-7 [217 kB]
-Get:8 http://mirror-ubc.debian.org/debian/ unstable/main libc0.1 kfreebsd-i386 2.17-3 [3887 kB]
-Get:9 http://mirror-ubc.debian.org/debian/ unstable/main libstdc++6 kfreebsd-i386 4.8.0-7 [349 kB]
-Get:10 http://mirror-ubc.debian.org/debian/ unstable/main libtinfo5 kfreebsd-i386 5.9+20130504-1 [289 kB]
-Get:11 http://mirror-ubc.debian.org/debian/ unstable/main libncurses5 kfreebsd-i386 5.9+20130504-1 [116 kB]
-Get:12 http://mirror-ubc.debian.org/debian/ unstable/main ncurses-bin kfreebsd-i386 5.9+20130504-1 [357 kB]
-Get:13 http://mirror-ubc.debian.org/debian/ unstable/main libpipeline1 kfreebsd-i386 1.2.3-1 [39.4 kB]
-Get:14 http://mirror-ubc.debian.org/debian/ unstable/main groff-base kfreebsd-i386 1.22.2-2 [733 kB]
-Get:15 http://mirror-ubc.debian.org/debian/ unstable/main bsdmainutils kfreebsd-i386 9.0.5 [205 kB]
-Get:16 http://mirror-ubc.debian.org/debian/ unstable/main man-db kfreebsd-i386 2.6.3-6 [889 kB]
-Get:17 http://mirror-ubc.debian.org/debian/ unstable/main libasprintf0c2 kfreebsd-i386 0.18.1.1-10 [27.0 kB]
-Get:18 http://mirror-ubc.debian.org/debian/ unstable/main libmagic1 kfreebsd-i386 1:5.14-1 [218 kB]
-Get:19 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3 kfreebsd-i386 1:8.31-2 [247 kB]
-Get:20 http://mirror-ubc.debian.org/debian/ unstable/main libxml2 kfreebsd-i386 2.8.0+dfsg1-7+nmu1 [905 kB]
-Get:21 http://mirror-ubc.debian.org/debian/ unstable/main libfreetype6 kfreebsd-i386 2.4.9-1.1 [453 kB]
-Get:22 http://mirror-ubc.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:23 http://mirror-ubc.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:24 http://mirror-ubc.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:25 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:26 http://mirror-ubc.debian.org/debian/ unstable/main libfontconfig1 kfreebsd-i386 2.9.0-7.1 [300 kB]
-Get:27 http://mirror-ubc.debian.org/debian/ unstable/main libpixman-1-0 kfreebsd-i386 0.26.0-4 [442 kB]
-Get:28 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-0 kfreebsd-i386 1.2.49-4 [192 kB]
-Get:29 http://mirror-ubc.debian.org/debian/ unstable/main libxau6 kfreebsd-i386 1:1.0.7-1 [18.5 kB]
-Get:30 http://mirror-ubc.debian.org/debian/ unstable/main libxdmcp6 kfreebsd-i386 1:1.1.1-1 [26.4 kB]
-Get:31 http://mirror-ubc.debian.org/debian/ unstable/main libxcb1 kfreebsd-i386 1.8.1-2 [53.8 kB]
-Get:32 http://mirror-ubc.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:33 http://mirror-ubc.debian.org/debian/ unstable/main libx11-6 kfreebsd-i386 2:1.5.0-1 [906 kB]
-Get:34 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-render0 kfreebsd-i386 1.8.1-2 [19.6 kB]
-Get:35 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-shm0 kfreebsd-i386 1.8.1-2 [10.5 kB]
-Get:36 http://mirror-ubc.debian.org/debian/ unstable/main libxext6 kfreebsd-i386 2:1.3.1-2 [55.5 kB]
-Get:37 http://mirror-ubc.debian.org/debian/ unstable/main libxrender1 kfreebsd-i386 1:0.9.7-1 [32.4 kB]
-Get:38 http://mirror-ubc.debian.org/debian/ unstable/main libcairo2 kfreebsd-i386 1.12.14-4 [1038 kB]
-Get:39 http://mirror-ubc.debian.org/debian/ unstable/main libffi6 kfreebsd-i386 3.0.13-4 [17.6 kB]
-Get:40 http://mirror-ubc.debian.org/debian/ unstable/main libglib2.0-0 kfreebsd-i386 2.36.1-2build1 [2036 kB]
-Get:41 http://mirror-ubc.debian.org/debian/ unstable/main libdatrie1 kfreebsd-i386 0.2.6-2 [30.9 kB]
-Get:42 http://mirror-ubc.debian.org/debian/ unstable/main libunistring0 kfreebsd-i386 0.9.3-5 [440 kB]
-Get:43 http://mirror-ubc.debian.org/debian/ unstable/main libgettextpo0 kfreebsd-i386 0.18.1.1-10 [141 kB]
-Get:44 http://mirror-ubc.debian.org/debian/ unstable/main libgfortran3 kfreebsd-i386 4.8.0-7 [327 kB]
-Get:45 http://mirror-ubc.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:46 http://mirror-ubc.debian.org/debian/ unstable/main libice6 kfreebsd-i386 2:1.0.8-2 [61.5 kB]
-Get:47 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8 kfreebsd-i386 8d-1 [132 kB]
-Get:48 http://mirror-ubc.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:49 http://mirror-ubc.debian.org/debian/ unstable/main libthai0 kfreebsd-i386 0.1.19-2 [43.6 kB]
-Get:50 http://mirror-ubc.debian.org/debian/ unstable/main libxft2 kfreebsd-i386 2.3.1-1 [60.9 kB]
-Get:51 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig kfreebsd-i386 2.9.0-7.1 [347 kB]
-Get:52 http://mirror-ubc.debian.org/debian/ unstable/main libpango1.0-0 kfreebsd-i386 1.30.0-1 [463 kB]
-Get:53 http://mirror-ubc.debian.org/debian/ unstable/main libpaper1 kfreebsd-i386 1.1.24+nmu2 [21.9 kB]
-Get:54 http://mirror-ubc.debian.org/debian/ unstable/main libpcrecpp0 kfreebsd-i386 1:8.31-2 [129 kB]
-Get:55 http://mirror-ubc.debian.org/debian/ unstable/main libsm6 kfreebsd-i386 2:1.2.1-2 [33.5 kB]
-Get:56 http://mirror-ubc.debian.org/debian/ unstable/main libjbig0 kfreebsd-i386 2.0-2 [31.8 kB]
-Get:57 http://mirror-ubc.debian.org/debian/ unstable/main libtiff5 kfreebsd-i386 4.0.2-6 [237 kB]
-Get:58 http://mirror-ubc.debian.org/debian/ unstable/main libxss1 kfreebsd-i386 1:1.2.2-1 [17.5 kB]
-Get:59 http://mirror-ubc.debian.org/debian/ unstable/main libxt6 kfreebsd-i386 1:1.1.3-1 [205 kB]
-Get:60 http://mirror-ubc.debian.org/debian/ unstable/main g++-4.7 kfreebsd-i386 4.7.3-4 [5452 kB]
-Get:61 http://mirror-ubc.debian.org/debian/ unstable/main gcc-4.7 kfreebsd-i386 4.7.3-4 [5420 kB]
-Get:62 http://mirror-ubc.debian.org/debian/ unstable/main libstdc++6-4.7-dev kfreebsd-i386 4.7.3-4 [1643 kB]
-Get:63 http://mirror-ubc.debian.org/debian/ unstable/main libgcc-4.7-dev kfreebsd-i386 4.7.3-4 [364 kB]
-Get:64 http://mirror-ubc.debian.org/debian/ unstable/main cpp-4.7 kfreebsd-i386 4.7.3-4 [5010 kB]
-Get:65 http://mirror-ubc.debian.org/debian/ unstable/main gcc-4.7-base kfreebsd-i386 4.7.3-4 [149 kB]
-Get:66 http://mirror-ubc.debian.org/debian/ unstable/main file kfreebsd-i386 1:5.14-1 [53.8 kB]
-Get:67 http://mirror-ubc.debian.org/debian/ unstable/main gettext-base kfreebsd-i386 0.18.1.1-10 [131 kB]
-Get:68 http://mirror-ubc.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:69 http://mirror-ubc.debian.org/debian/ unstable/main html2text kfreebsd-i386 1.3.2a-15 [101 kB]
-Get:70 http://mirror-ubc.debian.org/debian/ unstable/main libasprintf-dev kfreebsd-i386 0.18.1.1-10 [26.6 kB]
-Get:71 http://mirror-ubc.debian.org/debian/ unstable/main libgettextpo-dev kfreebsd-i386 0.18.1.1-10 [170 kB]
-Get:72 http://mirror-ubc.debian.org/debian/ unstable/main gettext kfreebsd-i386 0.18.1.1-10 [1747 kB]
-Get:73 http://mirror-ubc.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:74 http://mirror-ubc.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:75 http://mirror-ubc.debian.org/debian/ unstable/main debhelper all 9.20130516 [708 kB]
-Get:76 http://mirror-ubc.debian.org/debian/ unstable/main libgfortran-4.7-dev kfreebsd-i386 4.7.3-4 [400 kB]
-Get:77 http://mirror-ubc.debian.org/debian/ unstable/main gfortran-4.7 kfreebsd-i386 4.7.3-4 [5325 kB]
-Get:78 http://mirror-ubc.debian.org/debian/ unstable/main gfortran kfreebsd-i386 4:4.7.2-1 [1116 B]
-Get:79 http://mirror-ubc.debian.org/debian/ unstable/main libblas3 kfreebsd-i386 1.2.20110419-5 [213 kB]
-Get:80 http://mirror-ubc.debian.org/debian/ unstable/main libblas-dev kfreebsd-i386 1.2.20110419-5 [216 kB]
-Get:81 http://mirror-ubc.debian.org/debian/ unstable/main libbz2-dev kfreebsd-i386 1.0.6-4 [31.6 kB]
-Get:82 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8-dev kfreebsd-i386 8d-1 [232 kB]
-Get:83 http://mirror-ubc.debian.org/debian/ unstable/main liblapack3 kfreebsd-i386 3.4.2+dfsg-1 [3349 kB]
-Get:84 http://mirror-ubc.debian.org/debian/ unstable/main liblapack-dev kfreebsd-i386 3.4.2+dfsg-1 [3707 kB]
-Get:85 http://mirror-ubc.debian.org/debian/ unstable/main libtinfo-dev kfreebsd-i386 5.9+20130504-1 [97.1 kB]
-Get:86 http://mirror-ubc.debian.org/debian/ unstable/main libncurses5-dev kfreebsd-i386 5.9+20130504-1 [212 kB]
-Get:87 http://mirror-ubc.debian.org/debian/ unstable/main libpaper-utils kfreebsd-i386 1.1.24+nmu2 [18.1 kB]
-Get:88 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3-dev kfreebsd-i386 1:8.31-2 [351 kB]
-Get:89 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g-dev kfreebsd-i386 1:1.2.8.dfsg-1 [215 kB]
-Get:90 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-dev kfreebsd-i386 1.2.49-4 [266 kB]
-Get:91 http://mirror-ubc.debian.org/debian/ unstable/main libreadline6-dev kfreebsd-i386 6.2+dfsg-0.1 [177 kB]
-Get:92 http://mirror-ubc.debian.org/debian/ unstable/main libreadline-dev kfreebsd-i386 6.2+dfsg-0.1 [900 B]
-Get:93 http://mirror-ubc.debian.org/debian/ unstable/main zip kfreebsd-i386 3.0-7 [329 kB]
-Get:94 http://mirror-ubc.debian.org/debian/ unstable/main unzip kfreebsd-i386 6.0-9 [187 kB]
-Get:95 http://mirror-ubc.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:96 http://mirror-ubc.debian.org/debian/ unstable/main tcl8.5 kfreebsd-i386 8.5.11-2 [1634 kB]
-Get:97 http://mirror-ubc.debian.org/debian/ unstable/main tk8.5 kfreebsd-i386 8.5.11-2 [1185 kB]
-Get:98 http://mirror-ubc.debian.org/debian/ unstable/main r-base-core kfreebsd-i386 3.0.0-2 [21.2 MB]
-Get:99 http://mirror-ubc.debian.org/debian/ unstable/main r-base-dev all 3.0.0-2 [3900 B]
+ cpp-4.8 g++-4.8 gcc-4.8 gcc-4.8-base libatomic1 libgcc-4.8-dev libgcc1
+ libgomp1 libquadmath0 libstdc++-4.8-dev libstdc++6
+11 upgraded, 95 newly installed, 0 to remove and 36 not upgraded.
+Need to get 82.9 MB/82.9 MB of archives.
+After this operation, 123 MB of additional disk space will be used.
+Get:1 http://mirror-ubc.debian.org/debian/ unstable/main libgomp1 kfreebsd-i386 4.8.1-8 [27.8 kB]
+Get:2 http://mirror-ubc.debian.org/debian/ unstable/main gcc-4.8-base kfreebsd-i386 4.8.1-8 [150 kB]
+Get:3 http://mirror-ubc.debian.org/debian/ unstable/main libstdc++6 kfreebsd-i386 4.8.1-8 [336 kB]
+Get:4 http://mirror-ubc.debian.org/debian/ unstable/main libatomic1 kfreebsd-i386 4.8.1-8 [8828 B]
+Get:5 http://mirror-ubc.debian.org/debian/ unstable/main libquadmath0 kfreebsd-i386 4.8.1-8 [216 kB]
+Get:6 http://mirror-ubc.debian.org/debian/ unstable/main cpp-4.8 kfreebsd-i386 4.8.1-8 [5552 kB]
+Get:7 http://mirror-ubc.debian.org/debian/ unstable/main libstdc++-4.8-dev kfreebsd-i386 4.8.1-8 [1706 kB]
+Get:8 http://mirror-ubc.debian.org/debian/ unstable/main g++-4.8 kfreebsd-i386 4.8.1-8 [7582 kB]
+Get:9 http://mirror-ubc.debian.org/debian/ unstable/main gcc-4.8 kfreebsd-i386 4.8.1-8 [6074 kB]
+Get:10 http://mirror-ubc.debian.org/debian/ unstable/main libgcc-4.8-dev kfreebsd-i386 4.8.1-8 [2605 kB]
+Get:11 http://mirror-ubc.debian.org/debian/ unstable/main libgcc1 kfreebsd-i386 1:4.8.1-8 [52.8 kB]
+Get:12 http://mirror-ubc.debian.org/debian/ unstable/main libpipeline1 kfreebsd-i386 1.2.4-1 [40.5 kB]
+Get:13 http://mirror-ubc.debian.org/debian/ unstable/main groff-base kfreebsd-i386 1.22.2-3 [733 kB]
+Get:14 http://mirror-ubc.debian.org/debian/ unstable/main bsdmainutils kfreebsd-i386 9.0.5 [205 kB]
+Get:15 http://mirror-ubc.debian.org/debian/ unstable/main man-db kfreebsd-i386 2.6.5-2 [970 kB]
+Get:16 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3 kfreebsd-i386 1:8.31-2 [247 kB]
+Get:17 http://mirror-ubc.debian.org/debian/ unstable/main libasprintf0c2 kfreebsd-i386 0.18.3-1 [29.7 kB]
+Get:18 http://mirror-ubc.debian.org/debian/ unstable/main libmagic1 kfreebsd-i386 1:5.14-2 [218 kB]
+Get:19 http://mirror-ubc.debian.org/debian/ unstable/main libxml2 kfreebsd-i386 2.9.1+dfsg1-2 [913 kB]
+Get:20 http://mirror-ubc.debian.org/debian/ unstable/main libdrm2 kfreebsd-i386 2.4.45-3 [468 kB]
+Get:21 http://mirror-ubc.debian.org/debian/ unstable/main libxau6 kfreebsd-i386 1:1.0.8-1 [20.8 kB]
+Get:22 http://mirror-ubc.debian.org/debian/ unstable/main libxdmcp6 kfreebsd-i386 1:1.1.1-1 [26.4 kB]
+Get:23 http://mirror-ubc.debian.org/debian/ unstable/main libxcb1 kfreebsd-i386 1.9.1-3 [52.9 kB]
+Get:24 http://mirror-ubc.debian.org/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:25 http://mirror-ubc.debian.org/debian/ unstable/main libx11-6 kfreebsd-i386 2:1.6.0-1 [920 kB]
+Get:26 http://mirror-ubc.debian.org/debian/ unstable/main libx11-xcb1 kfreebsd-i386 2:1.6.0-1 [153 kB]
+Get:27 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-dri2-0 kfreebsd-i386 1.9.1-3 [13.3 kB]
+Get:28 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-render0 kfreebsd-i386 1.9.1-3 [19.6 kB]
+Get:29 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-shape0 kfreebsd-i386 1.9.1-3 [11.6 kB]
+Get:30 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-xfixes0 kfreebsd-i386 1.9.1-3 [15.3 kB]
+Get:31 http://mirror-ubc.debian.org/debian/ unstable/main libegl1-mesa kfreebsd-i386 9.1.4-1 [75.8 kB]
+Get:32 http://mirror-ubc.debian.org/debian/ unstable/main libfreetype6 kfreebsd-i386 2.4.9-1.1 [453 kB]
+Get:33 http://mirror-ubc.debian.org/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:34 http://mirror-ubc.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:35 http://mirror-ubc.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:36 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:37 http://mirror-ubc.debian.org/debian/ unstable/main libfontconfig1 kfreebsd-i386 2.10.2-2 [321 kB]
+Get:38 http://mirror-ubc.debian.org/debian/ unstable/main libglapi-mesa kfreebsd-i386 9.1.4-1 [49.3 kB]
+Get:39 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-glx0 kfreebsd-i386 1.9.1-3 [33.3 kB]
+Get:40 http://mirror-ubc.debian.org/debian/ unstable/main libxfixes3 kfreebsd-i386 1:5.0.1-1 [22.5 kB]
+Get:41 http://mirror-ubc.debian.org/debian/ unstable/main libxdamage1 kfreebsd-i386 1:1.1.4-1 [15.1 kB]
+Get:42 http://mirror-ubc.debian.org/debian/ unstable/main libxext6 kfreebsd-i386 2:1.3.2-1 [57.0 kB]
+Get:43 http://mirror-ubc.debian.org/debian/ unstable/main libxxf86vm1 kfreebsd-i386 1:1.1.2-1+deb7u1 [19.6 kB]
+Get:44 http://mirror-ubc.debian.org/debian/ unstable/main libgl1-mesa-glx kfreebsd-i386 9.1.4-1 [133 kB]
+Get:45 http://mirror-ubc.debian.org/debian/ unstable/main libpixman-1-0 kfreebsd-i386 0.30.0-3 [522 kB]
+Get:46 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-0 kfreebsd-i386 1.2.49-4 [192 kB]
+Get:47 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-shm0 kfreebsd-i386 1.9.1-3 [10.9 kB]
+Get:48 http://mirror-ubc.debian.org/debian/ unstable/main libxrender1 kfreebsd-i386 1:0.9.8-1 [33.1 kB]
+Get:49 http://mirror-ubc.debian.org/debian/ unstable/main libcairo2 kfreebsd-i386 1.12.14-5 [1075 kB]
+Get:50 http://mirror-ubc.debian.org/debian/ unstable/main libffi6 kfreebsd-i386 3.0.13-4 [17.6 kB]
+Get:51 http://mirror-ubc.debian.org/debian/ unstable/main libglib2.0-0 kfreebsd-i386 2.36.3-3 [2031 kB]
+Get:52 http://mirror-ubc.debian.org/debian/ unstable/main libcroco3 kfreebsd-i386 0.6.8-2 [134 kB]
+Get:53 http://mirror-ubc.debian.org/debian/ unstable/main libdatrie1 kfreebsd-i386 0.2.6-2 [30.9 kB]
+Get:54 http://mirror-ubc.debian.org/debian/ unstable/main libgfortran3 kfreebsd-i386 4.8.1-8 [324 kB]
+Get:55 http://mirror-ubc.debian.org/debian/ unstable/main libgraphite2-3 kfreebsd-i386 1.2.3-1 [73.9 kB]
+Get:56 http://mirror-ubc.debian.org/debian/ unstable/main libharfbuzz0a kfreebsd-i386 0.9.19-1 [438 kB]
+Get:57 http://mirror-ubc.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:58 http://mirror-ubc.debian.org/debian/ unstable/main libice6 kfreebsd-i386 2:1.0.8-2 [61.5 kB]
+Get:59 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8 kfreebsd-i386 8d-1 [132 kB]
+Get:60 http://mirror-ubc.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:61 http://mirror-ubc.debian.org/debian/ unstable/main libthai0 kfreebsd-i386 0.1.19-2 [43.6 kB]
+Get:62 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig kfreebsd-i386 2.10.2-2 [374 kB]
+Get:63 http://mirror-ubc.debian.org/debian/ unstable/main libpango-1.0-0 kfreebsd-i386 1.32.5-5+b1 [263 kB]
+Get:64 http://mirror-ubc.debian.org/debian/ unstable/main libpangoft2-1.0-0 kfreebsd-i386 1.32.5-5+b1 [187 kB]
+Get:65 http://mirror-ubc.debian.org/debian/ unstable/main libpangocairo-1.0-0 kfreebsd-i386 1.32.5-5+b1 [175 kB]
+Get:66 http://mirror-ubc.debian.org/debian/ unstable/main libpaper1 kfreebsd-i386 1.1.24+nmu2 [21.9 kB]
+Get:67 http://mirror-ubc.debian.org/debian/ unstable/main libpcrecpp0 kfreebsd-i386 1:8.31-2 [129 kB]
+Get:68 http://mirror-ubc.debian.org/debian/ unstable/main libsm6 kfreebsd-i386 2:1.2.1-2 [33.5 kB]
+Get:69 http://mirror-ubc.debian.org/debian/ unstable/main libjbig0 kfreebsd-i386 2.0-2 [31.8 kB]
+Get:70 http://mirror-ubc.debian.org/debian/ unstable/main libtiff5 kfreebsd-i386 4.0.3-1 [236 kB]
+Get:71 http://mirror-ubc.debian.org/debian/ unstable/main libunistring0 kfreebsd-i386 0.9.3-5 [440 kB]
+Get:72 http://mirror-ubc.debian.org/debian/ unstable/main libxft2 kfreebsd-i386 2.3.1-1 [60.9 kB]
+Get:73 http://mirror-ubc.debian.org/debian/ unstable/main libxss1 kfreebsd-i386 1:1.2.2-1 [17.5 kB]
+Get:74 http://mirror-ubc.debian.org/debian/ unstable/main libxt6 kfreebsd-i386 1:1.1.3-1+deb7u1 [206 kB]
+Get:75 http://mirror-ubc.debian.org/debian/ unstable/main file kfreebsd-i386 1:5.14-2 [53.8 kB]
+Get:76 http://mirror-ubc.debian.org/debian/ unstable/main gettext-base kfreebsd-i386 0.18.3-1 [138 kB]
+Get:77 http://mirror-ubc.debian.org/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:78 http://mirror-ubc.debian.org/debian/ unstable/main gettext kfreebsd-i386 0.18.3-1 [1858 kB]
+Get:79 http://mirror-ubc.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:80 http://mirror-ubc.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:81 http://mirror-ubc.debian.org/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:82 http://mirror-ubc.debian.org/debian/ unstable/main libgfortran-4.8-dev kfreebsd-i386 4.8.1-8 [392 kB]
+Get:83 http://mirror-ubc.debian.org/debian/ unstable/main gfortran-4.8 kfreebsd-i386 4.8.1-8 [5874 kB]
+Get:84 http://mirror-ubc.debian.org/debian/ unstable/main gfortran kfreebsd-i386 4:4.8.1-2 [1122 B]
+Get:85 http://mirror-ubc.debian.org/debian/ unstable/main libblas3 kfreebsd-i386 1.2.20110419-5 [213 kB]
+Get:86 http://mirror-ubc.debian.org/debian/ unstable/main libblas-dev kfreebsd-i386 1.2.20110419-5 [216 kB]
+Get:87 http://mirror-ubc.debian.org/debian/ unstable/main libbz2-dev kfreebsd-i386 1.0.6-4 [31.6 kB]
+Get:88 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8-dev kfreebsd-i386 8d-1 [232 kB]
+Get:89 http://mirror-ubc.debian.org/debian/ unstable/main liblapack3 kfreebsd-i386 3.4.2+dfsg-1 [3349 kB]
+Get:90 http://mirror-ubc.debian.org/debian/ unstable/main liblapack-dev kfreebsd-i386 3.4.2+dfsg-1 [3707 kB]
+Get:91 http://mirror-ubc.debian.org/debian/ unstable/main libtinfo-dev kfreebsd-i386 5.9+20130608-1 [97.1 kB]
+Get:92 http://mirror-ubc.debian.org/debian/ unstable/main libncurses5-dev kfreebsd-i386 5.9+20130608-1 [212 kB]
+Get:93 http://mirror-ubc.debian.org/debian/ unstable/main libpaper-utils kfreebsd-i386 1.1.24+nmu2 [18.1 kB]
+Get:94 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3-dev kfreebsd-i386 1:8.31-2 [351 kB]
+Get:95 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g-dev kfreebsd-i386 1:1.2.8.dfsg-1 [215 kB]
+Get:96 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-dev kfreebsd-i386 1.2.49-4 [266 kB]
+Get:97 http://mirror-ubc.debian.org/debian/ unstable/main libreadline6-dev kfreebsd-i386 6.2+dfsg-0.1 [177 kB]
+Get:98 http://mirror-ubc.debian.org/debian/ unstable/main libreadline-dev kfreebsd-i386 6.2+dfsg-0.1 [900 B]
+Get:99 http://mirror-ubc.debian.org/debian/ unstable/main zip kfreebsd-i386 3.0-7 [329 kB]
+Get:100 http://mirror-ubc.debian.org/debian/ unstable/main unzip kfreebsd-i386 6.0-9 [187 kB]
+Get:101 http://mirror-ubc.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:102 http://mirror-ubc.debian.org/debian/ unstable/main tcl8.5 kfreebsd-i386 8.5.14-2 [1635 kB]
+Get:103 http://mirror-ubc.debian.org/debian/ unstable/main tk8.5 kfreebsd-i386 8.5.14-2 [1181 kB]
+Get:104 http://mirror-ubc.debian.org/debian/ unstable/main r-base-core kfreebsd-i386 3.0.1-6 [21.2 MB]
+Get:105 http://mirror-ubc.debian.org/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 82.3 MB in 8s (9285 kB/s)
-(Reading database ... 11286 files and directories currently installed.)
-Preparing to replace libc0.1-dev:kfreebsd-i386 2.13-38 (using .../libc0.1-dev_2.17-3_kfreebsd-i386.deb) ...
-Unpacking replacement libc0.1-dev:kfreebsd-i386 ...
-Preparing to replace libc-dev-bin 2.13-38 (using .../libc-dev-bin_2.17-3_kfreebsd-i386.deb) ...
-Unpacking replacement libc-dev-bin ...
-Preparing to replace libgomp1:kfreebsd-i386 4.8.0-6 (using .../libgomp1_4.8.0-7_kfreebsd-i386.deb) ...
+Fetched 82.9 MB in 13s (6174 kB/s)
+(Reading database ... 11336 files and directories currently installed.)
+Preparing to replace libgomp1:kfreebsd-i386 4.8.1-6 (using .../libgomp1_4.8.1-8_kfreebsd-i386.deb) ...
Unpacking replacement libgomp1:kfreebsd-i386 ...
-Preparing to replace gcc-4.8-base:kfreebsd-i386 4.8.0-6 (using .../gcc-4.8-base_4.8.0-7_kfreebsd-i386.deb) ...
+Preparing to replace gcc-4.8-base:kfreebsd-i386 4.8.1-6 (using .../gcc-4.8-base_4.8.1-8_kfreebsd-i386.deb) ...
Unpacking replacement gcc-4.8-base:kfreebsd-i386 ...
-Setting up gcc-4.8-base:kfreebsd-i386 (4.8.0-7) ...
-(Reading database ... 11293 files and directories currently installed.)
-Preparing to replace libgcc1:kfreebsd-i386 1:4.8.0-6 (using .../libgcc1_1%3a4.8.0-7_kfreebsd-i386.deb) ...
+Setting up gcc-4.8-base:kfreebsd-i386 (4.8.1-8) ...
+(Reading database ... 11336 files and directories currently installed.)
+Preparing to replace libstdc++6:kfreebsd-i386 4.8.1-6 (using .../libstdc++6_4.8.1-8_kfreebsd-i386.deb) ...
+Unpacking replacement libstdc++6:kfreebsd-i386 ...
+Preparing to replace libgcc1:kfreebsd-i386 1:4.8.1-6 (using .../libgcc1_1%3a4.8.1-8_kfreebsd-i386.deb) ...
Unpacking replacement libgcc1:kfreebsd-i386 ...
-Setting up libgcc1:kfreebsd-i386 (1:4.8.0-7) ...
-(Reading database ... 11293 files and directories currently installed.)
-Preparing to replace libquadmath0:kfreebsd-i386 4.8.0-6 (using .../libquadmath0_4.8.0-7_kfreebsd-i386.deb) ...
+Setting up libgcc1:kfreebsd-i386 (1:4.8.1-8) ...
+Setting up libstdc++6:kfreebsd-i386 (4.8.1-8) ...
+Processing triggers for libc-bin ...
+(Reading database ... 11336 files and directories currently installed.)
+Preparing to replace libatomic1:kfreebsd-i386 4.8.1-6 (using .../libatomic1_4.8.1-8_kfreebsd-i386.deb) ...
+Unpacking replacement libatomic1:kfreebsd-i386 ...
+Preparing to replace libquadmath0:kfreebsd-i386 4.8.1-6 (using .../libquadmath0_4.8.1-8_kfreebsd-i386.deb) ...
Unpacking replacement libquadmath0:kfreebsd-i386 ...
-Preparing to replace libc0.1:kfreebsd-i386 2.13-38 (using .../libc0.1_2.17-3_kfreebsd-i386.deb) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Unpacking replacement libc0.1:kfreebsd-i386 ...
-Setting up libc0.1:kfreebsd-i386 (2.17-3) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Nothing to restart.
-(Reading database ... 11299 files and directories currently installed.)
-Preparing to replace libstdc++6:kfreebsd-i386 4.8.0-6 (using .../libstdc++6_4.8.0-7_kfreebsd-i386.deb) ...
-Unpacking replacement libstdc++6:kfreebsd-i386 ...
-Setting up libstdc++6:kfreebsd-i386 (4.8.0-7) ...
-(Reading database ... 11299 files and directories currently installed.)
-Preparing to replace libtinfo5:kfreebsd-i386 5.9-10 (using .../libtinfo5_5.9+20130504-1_kfreebsd-i386.deb) ...
-Unpacking replacement libtinfo5:kfreebsd-i386 ...
-Setting up libtinfo5:kfreebsd-i386 (5.9+20130504-1) ...
-(Reading database ... 11299 files and directories currently installed.)
-Preparing to replace libncurses5:kfreebsd-i386 5.9-10 (using .../libncurses5_5.9+20130504-1_kfreebsd-i386.deb) ...
-Unpacking replacement libncurses5:kfreebsd-i386 ...
-Setting up libncurses5:kfreebsd-i386 (5.9+20130504-1) ...
-(Reading database ... 11299 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_kfreebsd-i386.deb) ...
-Unpacking replacement ncurses-bin ...
-Setting up ncurses-bin (5.9+20130504-1) ...
+Preparing to replace cpp-4.8 4.8.1-6 (using .../cpp-4.8_4.8.1-8_kfreebsd-i386.deb) ...
+Unpacking replacement cpp-4.8 ...
+Preparing to replace libstdc++-4.8-dev:kfreebsd-i386 4.8.1-6 (using .../libstdc++-4.8-dev_4.8.1-8_kfreebsd-i386.deb) ...
+Unpacking replacement libstdc++-4.8-dev:kfreebsd-i386 ...
+Preparing to replace g++-4.8 4.8.1-6 (using .../g++-4.8_4.8.1-8_kfreebsd-i386.deb) ...
+Unpacking replacement g++-4.8 ...
+Preparing to replace gcc-4.8 4.8.1-6 (using .../gcc-4.8_4.8.1-8_kfreebsd-i386.deb) ...
+Unpacking replacement gcc-4.8 ...
+Preparing to replace libgcc-4.8-dev:kfreebsd-i386 4.8.1-6 (using .../libgcc-4.8-dev_4.8.1-8_kfreebsd-i386.deb) ...
+Unpacking replacement libgcc-4.8-dev:kfreebsd-i386 ...
Selecting previously unselected package libpipeline1:kfreebsd-i386.
-(Reading database ... 11297 files and directories currently installed.)
-Unpacking libpipeline1:kfreebsd-i386 (from .../libpipeline1_1.2.3-1_kfreebsd-i386.deb) ...
+Unpacking libpipeline1:kfreebsd-i386 (from .../libpipeline1_1.2.4-1_kfreebsd-i386.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_kfreebsd-i386.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_kfreebsd-i386.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_kfreebsd-i386.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_kfreebsd-i386.deb) ...
-Selecting previously unselected package libasprintf0c2:kfreebsd-i386.
-Unpacking libasprintf0c2:kfreebsd-i386 (from .../libasprintf0c2_0.18.1.1-10_kfreebsd-i386.deb) ...
-Selecting previously unselected package libmagic1:kfreebsd-i386.
-Unpacking libmagic1:kfreebsd-i386 (from .../libmagic1_1%3a5.14-1_kfreebsd-i386.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_kfreebsd-i386.deb) ...
Selecting previously unselected package libpcre3:kfreebsd-i386.
Unpacking libpcre3:kfreebsd-i386 (from .../libpcre3_1%3a8.31-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libasprintf0c2:kfreebsd-i386.
+Unpacking libasprintf0c2:kfreebsd-i386 (from .../libasprintf0c2_0.18.3-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libmagic1:kfreebsd-i386.
+Unpacking libmagic1:kfreebsd-i386 (from .../libmagic1_1%3a5.14-2_kfreebsd-i386.deb) ...
Selecting previously unselected package libxml2:kfreebsd-i386.
-Unpacking libxml2:kfreebsd-i386 (from .../libxml2_2.8.0+dfsg1-7+nmu1_kfreebsd-i386.deb) ...
+Unpacking libxml2:kfreebsd-i386 (from .../libxml2_2.9.1+dfsg1-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libdrm2:kfreebsd-i386.
+Unpacking libdrm2:kfreebsd-i386 (from .../libdrm2_2.4.45-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxau6:kfreebsd-i386.
+Unpacking libxau6:kfreebsd-i386 (from .../libxau6_1%3a1.0.8-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxdmcp6:kfreebsd-i386.
+Unpacking libxdmcp6:kfreebsd-i386 (from .../libxdmcp6_1%3a1.1.1-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxcb1:kfreebsd-i386.
+Unpacking libxcb1:kfreebsd-i386 (from .../libxcb1_1.9.1-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:kfreebsd-i386.
+Unpacking libx11-6:kfreebsd-i386 (from .../libx11-6_2%3a1.6.0-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libx11-xcb1:kfreebsd-i386.
+Unpacking libx11-xcb1:kfreebsd-i386 (from .../libx11-xcb1_2%3a1.6.0-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxcb-dri2-0:kfreebsd-i386.
+Unpacking libxcb-dri2-0:kfreebsd-i386 (from .../libxcb-dri2-0_1.9.1-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxcb-render0:kfreebsd-i386.
+Unpacking libxcb-render0:kfreebsd-i386 (from .../libxcb-render0_1.9.1-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxcb-shape0:kfreebsd-i386.
+Unpacking libxcb-shape0:kfreebsd-i386 (from .../libxcb-shape0_1.9.1-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxcb-xfixes0:kfreebsd-i386.
+Unpacking libxcb-xfixes0:kfreebsd-i386 (from .../libxcb-xfixes0_1.9.1-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libegl1-mesa:kfreebsd-i386.
+Unpacking libegl1-mesa:kfreebsd-i386 (from .../libegl1-mesa_9.1.4-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libfreetype6:kfreebsd-i386.
Unpacking libfreetype6:kfreebsd-i386 (from .../libfreetype6_2.4.9-1.1_kfreebsd-i386.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:kfreebsd-i386.
-Unpacking libfontconfig1:kfreebsd-i386 (from .../libfontconfig1_2.9.0-7.1_kfreebsd-i386.deb) ...
+Unpacking libfontconfig1:kfreebsd-i386 (from .../libfontconfig1_2.10.2-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libglapi-mesa:kfreebsd-i386.
+Unpacking libglapi-mesa:kfreebsd-i386 (from .../libglapi-mesa_9.1.4-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxcb-glx0:kfreebsd-i386.
+Unpacking libxcb-glx0:kfreebsd-i386 (from .../libxcb-glx0_1.9.1-3_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxfixes3:kfreebsd-i386.
+Unpacking libxfixes3:kfreebsd-i386 (from .../libxfixes3_1%3a5.0.1-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxdamage1:kfreebsd-i386.
+Unpacking libxdamage1:kfreebsd-i386 (from .../libxdamage1_1%3a1.1.4-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxext6:kfreebsd-i386.
+Unpacking libxext6:kfreebsd-i386 (from .../libxext6_2%3a1.3.2-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxxf86vm1:kfreebsd-i386.
+Unpacking libxxf86vm1:kfreebsd-i386 (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:kfreebsd-i386.
+Unpacking libgl1-mesa-glx:kfreebsd-i386 (from .../libgl1-mesa-glx_9.1.4-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libpixman-1-0:kfreebsd-i386.
-Unpacking libpixman-1-0:kfreebsd-i386 (from .../libpixman-1-0_0.26.0-4_kfreebsd-i386.deb) ...
+Unpacking libpixman-1-0:kfreebsd-i386 (from .../libpixman-1-0_0.30.0-3_kfreebsd-i386.deb) ...
Selecting previously unselected package libpng12-0:kfreebsd-i386.
Unpacking libpng12-0:kfreebsd-i386 (from .../libpng12-0_1.2.49-4_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxau6:kfreebsd-i386.
-Unpacking libxau6:kfreebsd-i386 (from .../libxau6_1%3a1.0.7-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxdmcp6:kfreebsd-i386.
-Unpacking libxdmcp6:kfreebsd-i386 (from .../libxdmcp6_1%3a1.1.1-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxcb1:kfreebsd-i386.
-Unpacking libxcb1:kfreebsd-i386 (from .../libxcb1_1.8.1-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:kfreebsd-i386.
-Unpacking libx11-6:kfreebsd-i386 (from .../libx11-6_2%3a1.5.0-1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxcb-render0:kfreebsd-i386.
-Unpacking libxcb-render0:kfreebsd-i386 (from .../libxcb-render0_1.8.1-2_kfreebsd-i386.deb) ...
Selecting previously unselected package libxcb-shm0:kfreebsd-i386.
-Unpacking libxcb-shm0:kfreebsd-i386 (from .../libxcb-shm0_1.8.1-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxext6:kfreebsd-i386.
-Unpacking libxext6:kfreebsd-i386 (from .../libxext6_2%3a1.3.1-2_kfreebsd-i386.deb) ...
+Unpacking libxcb-shm0:kfreebsd-i386 (from .../libxcb-shm0_1.9.1-3_kfreebsd-i386.deb) ...
Selecting previously unselected package libxrender1:kfreebsd-i386.
-Unpacking libxrender1:kfreebsd-i386 (from .../libxrender1_1%3a0.9.7-1_kfreebsd-i386.deb) ...
+Unpacking libxrender1:kfreebsd-i386 (from .../libxrender1_1%3a0.9.8-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libcairo2:kfreebsd-i386.
-Unpacking libcairo2:kfreebsd-i386 (from .../libcairo2_1.12.14-4_kfreebsd-i386.deb) ...
+Unpacking libcairo2:kfreebsd-i386 (from .../libcairo2_1.12.14-5_kfreebsd-i386.deb) ...
Selecting previously unselected package libffi6:kfreebsd-i386.
Unpacking libffi6:kfreebsd-i386 (from .../libffi6_3.0.13-4_kfreebsd-i386.deb) ...
Selecting previously unselected package libglib2.0-0:kfreebsd-i386.
-Unpacking libglib2.0-0:kfreebsd-i386 (from .../libglib2.0-0_2.36.1-2build1_kfreebsd-i386.deb) ...
+Unpacking libglib2.0-0:kfreebsd-i386 (from .../libglib2.0-0_2.36.3-3_kfreebsd-i386.deb) ...
Selecting previously unselected package libcroco3:kfreebsd-i386.
Unpacking libcroco3:kfreebsd-i386 (from .../libcroco3_0.6.8-2_kfreebsd-i386.deb) ...
Selecting previously unselected package libdatrie1:kfreebsd-i386.
Unpacking libdatrie1:kfreebsd-i386 (from .../libdatrie1_0.2.6-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libunistring0:kfreebsd-i386.
-Unpacking libunistring0:kfreebsd-i386 (from .../libunistring0_0.9.3-5_kfreebsd-i386.deb) ...
-Selecting previously unselected package libgettextpo0:kfreebsd-i386.
-Unpacking libgettextpo0:kfreebsd-i386 (from .../libgettextpo0_0.18.1.1-10_kfreebsd-i386.deb) ...
Selecting previously unselected package libgfortran3:kfreebsd-i386.
-Unpacking libgfortran3:kfreebsd-i386 (from .../libgfortran3_4.8.0-7_kfreebsd-i386.deb) ...
+Unpacking libgfortran3:kfreebsd-i386 (from .../libgfortran3_4.8.1-8_kfreebsd-i386.deb) ...
+Selecting previously unselected package libgraphite2-3:kfreebsd-i386.
+Unpacking libgraphite2-3:kfreebsd-i386 (from .../libgraphite2-3_1.2.3-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libharfbuzz0a:kfreebsd-i386.
+Unpacking libharfbuzz0a:kfreebsd-i386 (from .../libharfbuzz0a_0.9.19-1_kfreebsd-i386.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:kfreebsd-i386.
@@ -440,12 +433,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:kfreebsd-i386.
Unpacking libthai0:kfreebsd-i386 (from .../libthai0_0.1.19-2_kfreebsd-i386.deb) ...
-Selecting previously unselected package libxft2:kfreebsd-i386.
-Unpacking libxft2:kfreebsd-i386 (from .../libxft2_2.3.1-1_kfreebsd-i386.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_kfreebsd-i386.deb) ...
-Selecting previously unselected package libpango1.0-0:kfreebsd-i386.
-Unpacking libpango1.0-0:kfreebsd-i386 (from .../libpango1.0-0_1.30.0-1_kfreebsd-i386.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_kfreebsd-i386.deb) ...
+Selecting previously unselected package libpango-1.0-0:kfreebsd-i386.
+Unpacking libpango-1.0-0:kfreebsd-i386 (from .../libpango-1.0-0_1.32.5-5+b1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:kfreebsd-i386.
+Unpacking libpangoft2-1.0-0:kfreebsd-i386 (from .../libpangoft2-1.0-0_1.32.5-5+b1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:kfreebsd-i386.
+Unpacking libpangocairo-1.0-0:kfreebsd-i386 (from .../libpangocairo-1.0-0_1.32.5-5+b1_kfreebsd-i386.deb) ...
Selecting previously unselected package libpaper1:kfreebsd-i386.
Unpacking libpaper1:kfreebsd-i386 (from .../libpaper1_1.1.24+nmu2_kfreebsd-i386.deb) ...
Selecting previously unselected package libpcrecpp0:kfreebsd-i386.
@@ -455,49 +450,35 @@ Unpacking libsm6:kfreebsd-i386 (from .../libsm6_2%3a1.2.1-2_kfreebsd-i386.deb) .
Selecting previously unselected package libjbig0:kfreebsd-i386.
Unpacking libjbig0:kfreebsd-i386 (from .../libjbig0_2.0-2_kfreebsd-i386.deb) ...
Selecting previously unselected package libtiff5:kfreebsd-i386.
-Unpacking libtiff5:kfreebsd-i386 (from .../libtiff5_4.0.2-6_kfreebsd-i386.deb) ...
+Unpacking libtiff5:kfreebsd-i386 (from .../libtiff5_4.0.3-1_kfreebsd-i386.deb) ...
+Selecting previously unselected package libunistring0:kfreebsd-i386.
+Unpacking libunistring0:kfreebsd-i386 (from .../libunistring0_0.9.3-5_kfreebsd-i386.deb) ...
+Selecting previously unselected package libxft2:kfreebsd-i386.
+Unpacking libxft2:kfreebsd-i386 (from .../libxft2_2.3.1-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libxss1:kfreebsd-i386.
Unpacking libxss1:kfreebsd-i386 (from .../libxss1_1%3a1.2.2-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libxt6:kfreebsd-i386.
-Unpacking libxt6:kfreebsd-i386 (from .../libxt6_1%3a1.1.3-1_kfreebsd-i386.deb) ...
-Preparing to replace g++-4.7 4.7.3-3 (using .../g++-4.7_4.7.3-4_kfreebsd-i386.deb) ...
-Unpacking replacement g++-4.7 ...
-Preparing to replace gcc-4.7 4.7.3-3 (using .../gcc-4.7_4.7.3-4_kfreebsd-i386.deb) ...
-Unpacking replacement gcc-4.7 ...
-Preparing to replace libstdc++6-4.7-dev:kfreebsd-i386 4.7.3-3 (using .../libstdc++6-4.7-dev_4.7.3-4_kfreebsd-i386.deb) ...
-Unpacking replacement libstdc++6-4.7-dev:kfreebsd-i386 ...
-Preparing to replace libgcc-4.7-dev:kfreebsd-i386 4.7.3-3 (using .../libgcc-4.7-dev_4.7.3-4_kfreebsd-i386.deb) ...
-Unpacking replacement libgcc-4.7-dev:kfreebsd-i386 ...
-Preparing to replace cpp-4.7 4.7.3-3 (using .../cpp-4.7_4.7.3-4_kfreebsd-i386.deb) ...
-Unpacking replacement cpp-4.7 ...
-Preparing to replace gcc-4.7-base:kfreebsd-i386 4.7.3-3 (using .../gcc-4.7-base_4.7.3-4_kfreebsd-i386.deb) ...
-Unpacking replacement gcc-4.7-base:kfreebsd-i386 ...
+Unpacking libxt6:kfreebsd-i386 (from .../libxt6_1%3a1.1.3-1+deb7u1_kfreebsd-i386.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_kfreebsd-i386.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_kfreebsd-i386.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_kfreebsd-i386.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_kfreebsd-i386.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_kfreebsd-i386.deb) ...
-Selecting previously unselected package libasprintf-dev:kfreebsd-i386.
-Unpacking libasprintf-dev:kfreebsd-i386 (from .../libasprintf-dev_0.18.1.1-10_kfreebsd-i386.deb) ...
-Selecting previously unselected package libgettextpo-dev:kfreebsd-i386.
-Unpacking libgettextpo-dev:kfreebsd-i386 (from .../libgettextpo-dev_0.18.1.1-10_kfreebsd-i386.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_kfreebsd-i386.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_kfreebsd-i386.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
-Selecting previously unselected package libgfortran-4.7-dev:kfreebsd-i386.
-Unpacking libgfortran-4.7-dev:kfreebsd-i386 (from .../libgfortran-4.7-dev_4.7.3-4_kfreebsd-i386.deb) ...
-Selecting previously unselected package gfortran-4.7.
-Unpacking gfortran-4.7 (from .../gfortran-4.7_4.7.3-4_kfreebsd-i386.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Selecting previously unselected package libgfortran-4.8-dev:kfreebsd-i386.
+Unpacking libgfortran-4.8-dev:kfreebsd-i386 (from .../libgfortran-4.8-dev_4.8.1-8_kfreebsd-i386.deb) ...
+Selecting previously unselected package gfortran-4.8.
+Unpacking gfortran-4.8 (from .../gfortran-4.8_4.8.1-8_kfreebsd-i386.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.7.2-1_kfreebsd-i386.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.8.1-2_kfreebsd-i386.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_kfreebsd-i386.deb) ...
Selecting previously unselected package libblas-dev.
@@ -511,9 +492,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_kfreebsd-i386.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libtinfo-dev:kfreebsd-i386.
-Unpacking libtinfo-dev:kfreebsd-i386 (from .../libtinfo-dev_5.9+20130504-1_kfreebsd-i386.deb) ...
+Unpacking libtinfo-dev:kfreebsd-i386 (from .../libtinfo-dev_5.9+20130608-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libncurses5-dev:kfreebsd-i386.
-Unpacking libncurses5-dev:kfreebsd-i386 (from .../libncurses5-dev_5.9+20130504-1_kfreebsd-i386.deb) ...
+Unpacking libncurses5-dev:kfreebsd-i386 (from .../libncurses5-dev_5.9+20130608-1_kfreebsd-i386.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_kfreebsd-i386.deb) ...
Selecting previously unselected package libpcre3-dev:kfreebsd-i386.
@@ -533,92 +514,104 @@ Unpacking unzip (from .../unzip_6.0-9_kfreebsd-i386.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_kfreebsd-i386.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_kfreebsd-i386.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_kfreebsd-i386.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_kfreebsd-i386.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.0-2_kfreebsd-i386.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_kfreebsd-i386.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.0-2_all.deb) ...
-Setting up libc-dev-bin (2.17-3) ...
-Setting up libc0.1-dev:kfreebsd-i386 (2.17-3) ...
-Setting up libgomp1:kfreebsd-i386 (4.8.0-7) ...
-Setting up libquadmath0:kfreebsd-i386 (4.8.0-7) ...
-Setting up libpipeline1:kfreebsd-i386 (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:kfreebsd-i386 (4.8.1-8) ...
+Setting up libatomic1:kfreebsd-i386 (4.8.1-8) ...
+Setting up libquadmath0:kfreebsd-i386 (4.8.1-8) ...
+Setting up cpp-4.8 (4.8.1-8) ...
+Setting up libgcc-4.8-dev:kfreebsd-i386 (4.8.1-8) ...
+Setting up libstdc++-4.8-dev:kfreebsd-i386 (4.8.1-8) ...
+Setting up gcc-4.8 (4.8.1-8) ...
+Setting up g++-4.8 (4.8.1-8) ...
+Setting up libpipeline1:kfreebsd-i386 (1.2.4-1) ...
+Setting up groff-base (1.22.2-3) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
-Setting up man-db (2.6.3-6) ...
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:kfreebsd-i386 (0.18.1.1-10) ...
-Setting up libmagic1:kfreebsd-i386 (1:5.14-1) ...
Setting up libpcre3:kfreebsd-i386 (1:8.31-2) ...
-Setting up libxml2:kfreebsd-i386 (2.8.0+dfsg1-7+nmu1) ...
+Setting up libasprintf0c2:kfreebsd-i386 (0.18.3-1) ...
+Setting up libmagic1:kfreebsd-i386 (1:5.14-2) ...
+Setting up libxml2:kfreebsd-i386 (2.9.1+dfsg1-2) ...
+Setting up libdrm2:kfreebsd-i386 (2.4.45-3) ...
+Setting up libxau6:kfreebsd-i386 (1:1.0.8-1) ...
+Setting up libxdmcp6:kfreebsd-i386 (1:1.1.1-1) ...
+Setting up libxcb1:kfreebsd-i386 (1.9.1-3) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:kfreebsd-i386 (2:1.6.0-1) ...
+Setting up libx11-xcb1:kfreebsd-i386 (2:1.6.0-1) ...
+Setting up libxcb-dri2-0:kfreebsd-i386 (1.9.1-3) ...
+Setting up libxcb-render0:kfreebsd-i386 (1.9.1-3) ...
+Setting up libxcb-shape0:kfreebsd-i386 (1.9.1-3) ...
+Setting up libxcb-xfixes0:kfreebsd-i386 (1.9.1-3) ...
+Setting up libegl1-mesa:kfreebsd-i386 (9.1.4-1) ...
Setting up libfreetype6:kfreebsd-i386 (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:kfreebsd-i386 (2.9.0-7.1) ...
-Setting up libpixman-1-0:kfreebsd-i386 (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:kfreebsd-i386 (2.10.2-2) ...
+Setting up libglapi-mesa:kfreebsd-i386 (9.1.4-1) ...
+Setting up libxcb-glx0:kfreebsd-i386 (1.9.1-3) ...
+Setting up libxfixes3:kfreebsd-i386 (1:5.0.1-1) ...
+Setting up libxdamage1:kfreebsd-i386 (1:1.1.4-1) ...
+Setting up libxext6:kfreebsd-i386 (2:1.3.2-1) ...
+Setting up libxxf86vm1:kfreebsd-i386 (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:kfreebsd-i386 (9.1.4-1) ...
+Setting up libpixman-1-0:kfreebsd-i386 (0.30.0-3) ...
Setting up libpng12-0:kfreebsd-i386 (1.2.49-4) ...
-Setting up libxau6:kfreebsd-i386 (1:1.0.7-1) ...
-Setting up libxdmcp6:kfreebsd-i386 (1:1.1.1-1) ...
-Setting up libxcb1:kfreebsd-i386 (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:kfreebsd-i386 (2:1.5.0-1) ...
-Setting up libxcb-render0:kfreebsd-i386 (1.8.1-2) ...
-Setting up libxcb-shm0:kfreebsd-i386 (1.8.1-2) ...
-Setting up libxext6:kfreebsd-i386 (2:1.3.1-2) ...
-Setting up libxrender1:kfreebsd-i386 (1:0.9.7-1) ...
-Setting up libcairo2:kfreebsd-i386 (1.12.14-4) ...
+Setting up libxcb-shm0:kfreebsd-i386 (1.9.1-3) ...
+Setting up libxrender1:kfreebsd-i386 (1:0.9.8-1) ...
+Setting up libcairo2:kfreebsd-i386 (1.12.14-5) ...
Setting up libffi6:kfreebsd-i386 (3.0.13-4) ...
-Setting up libglib2.0-0:kfreebsd-i386 (2.36.1-2build1) ...
+Setting up libglib2.0-0:kfreebsd-i386 (2.36.3-3) ...
No schema files found: doing nothing.
Setting up libcroco3:kfreebsd-i386 (0.6.8-2) ...
Setting up libdatrie1:kfreebsd-i386 (0.2.6-2) ...
-Setting up libunistring0:kfreebsd-i386 (0.9.3-5) ...
-Setting up libgettextpo0:kfreebsd-i386 (0.18.1.1-10) ...
-Setting up libgfortran3:kfreebsd-i386 (4.8.0-7) ...
+Setting up libgfortran3:kfreebsd-i386 (4.8.1-8) ...
+Setting up libgraphite2-3:kfreebsd-i386 (1.2.3-1) ...
+Setting up libharfbuzz0a:kfreebsd-i386 (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix.
Setting up libice6:kfreebsd-i386 (2:1.0.8-2) ...
Setting up libjpeg8:kfreebsd-i386 (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:kfreebsd-i386 (0.1.19-2) ...
-Setting up libxft2:kfreebsd-i386 (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:kfreebsd-i386 (1.30.0-1) ...
+Setting up libpango-1.0-0:kfreebsd-i386 (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:kfreebsd-i386 (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:kfreebsd-i386 (1.32.5-5+b1) ...
Setting up libpaper1:kfreebsd-i386 (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:kfreebsd-i386 (1:8.31-2) ...
Setting up libsm6:kfreebsd-i386 (2:1.2.1-2) ...
Setting up libjbig0:kfreebsd-i386 (2.0-2) ...
-Setting up libtiff5:kfreebsd-i386 (4.0.2-6) ...
+Setting up libtiff5:kfreebsd-i386 (4.0.3-1) ...
+Setting up libunistring0:kfreebsd-i386 (0.9.3-5) ...
+Setting up libxft2:kfreebsd-i386 (2.3.1-1) ...
Setting up libxss1:kfreebsd-i386 (1:1.2.2-1) ...
-Setting up libxt6:kfreebsd-i386 (1:1.1.3-1) ...
-Setting up gcc-4.7-base:kfreebsd-i386 (4.7.3-4) ...
-Setting up cpp-4.7 (4.7.3-4) ...
-Setting up libgcc-4.7-dev:kfreebsd-i386 (4.7.3-4) ...
-Setting up gcc-4.7 (4.7.3-4) ...
-Setting up libstdc++6-4.7-dev:kfreebsd-i386 (4.7.3-4) ...
-Setting up g++-4.7 (4.7.3-4) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libasprintf-dev:kfreebsd-i386 (0.18.1.1-10) ...
-Setting up libgettextpo-dev:kfreebsd-i386 (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:kfreebsd-i386 (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up libgfortran-4.7-dev:kfreebsd-i386 (4.7.3-4) ...
-Setting up gfortran-4.7 (4.7.3-4) ...
-Setting up gfortran (4:4.7.2-1) ...
+Setting up debhelper (9.20130630) ...
+Setting up libgfortran-4.8-dev:kfreebsd-i386 (4.8.1-8) ...
+Setting up gfortran-4.8 (4.8.1-8) ...
+Setting up gfortran (4:4.8.1-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -630,8 +623,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:kfreebsd-i386 (5.9+20130504-1) ...
-Setting up libncurses5-dev:kfreebsd-i386 (5.9+20130504-1) ...
+Setting up libtinfo-dev:kfreebsd-i386 (5.9+20130608-1) ...
+Setting up libncurses5-dev:kfreebsd-i386 (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:kfreebsd-i386 (1:8.31-2) ...
Setting up zlib1g-dev:kfreebsd-i386 (1:1.2.8.dfsg-1) ...
@@ -641,23 +634,24 @@ Setting up libreadline-dev:kfreebsd-i386 (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.0-2) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.0-2) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 13 not upgraded.
-Checking correctness of dependencies...
-Kernel: GNU/kFreeBSD 8.1-1-686-smp kfreebsd-i386 (i686)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.7_4.7.3-4 gcc-4.7_4.7.3-4 kfreebsd-kernel-headers_0.83 libc0.1-dev_2.17-3 libstdc++6_4.8.0-7 libstdc++6-4.7-dev_4.7.3-4
-Package versions: apt_0.9.8 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.13-3.3 cpp_4:4.7.2-1 cpp-4.7_4.7.3-4 dash_0.5.7-3 debconf_1.5.50 debconf-i18n_1.5.50 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1:5.14-1 find [...]
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
+Processing triggers for libc-bin ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: GNU/kFreeBSD 9.0-2-686 kfreebsd-i386 (i386)
+Toolchain package versions: binutils_2.23.52.20130620-1 dpkg-dev_1.16.10 g++-4.8_4.8.1-8 gcc-4.8_4.8.1-8 kfreebsd-kernel-headers_9.0-3 libc0.1-dev_2.17-7 libstdc++-4.8-dev_4.8.1-8 libstdc++6_4.8.1-8
+Package versions: apt_0.9.9 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130620-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.13-3.3 cpp_4:4.8.1-2 cpp-4.8_4.8.1-8 dash_0.5.7-3 debconf_1.5.50 debconf-i18n_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1 [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -667,28 +661,46 @@ Package versions: apt_0.9.8 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 bi
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+DEB_BUILD_OPTIONS=parallel=2
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-kfreebsd-i386-sbuild
+SCHROOT_CHROOT_NAME=sid-ki-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-ki-sbuild-1375608984-85762
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture kfreebsd-i386
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -704,7 +716,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -723,26 +735,28 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.0-2)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O2 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
+ double abstol = -1e500; // infinity
+ ^
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -752,13 +766,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bi
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -766,7 +780,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -802,9 +816,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -835,79 +849,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_kfreebsd-i386.deb'.
- dpkg-genchanges -B -mkfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_kfreebsd-i386.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_kfreebsd-i386.deb'.
+ dpkg-genchanges -B -mkfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_kfreebsd-i386.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1306
+Build finished at 20130804-0939
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_kfreebsd-i386.changes:
+─────────────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_kfreebsd-i386.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: kfreebsd-i386
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
Maintainer: kfreebsd-i386 Build Daemon (finzi) <buildd_kfreebsd-i386-finzi at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
- .
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- cf17083120b2b4a0c3b16210e87d4cec2c80e713 1616702 r-bioc-limma_3.16.3~dfsg-1_kfreebsd-i386.deb
+ d7b51145faf5e941cd9031571e03cb72486eeb44 863238 r-bioc-limma_3.16.7~dfsg-1_kfreebsd-i386.deb
Checksums-Sha256:
- bd7dac3f0f52fdff74c2aec203cc74c2f74670408af4a73d170756fe015dd5ad 1616702 r-bioc-limma_3.16.3~dfsg-1_kfreebsd-i386.deb
+ 754c5bf97fe11b25afd781fd4c739d3ed8d86000abced8c21c8ca3dce33cb17e 863238 r-bioc-limma_3.16.7~dfsg-1_kfreebsd-i386.deb
Files:
- acdc959fe934ed477bb9360ad00b9b39 1616702 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_kfreebsd-i386.deb
+ 894a36f16daecc63f4554a58d1935254 863238 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_kfreebsd-i386.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_kfreebsd-i386.deb
+r-bioc-limma_3.16.7~dfsg-1_kfreebsd-i386.deb
────────────────────────────────────────────
new debian package, version 2.0.
- size 1616702 bytes: control archive= 1675 bytes.
- 783 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ size 863238 bytes: control archive=1634 bytes.
+ 782 bytes, 16 lines control
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: kfreebsd-i386
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1785
- Depends: libc0.1 (>= 2.3), r-base-core (>= 3.0.0-2)
+ Installed-Size: 999
+ Depends: libc0.1 (>= 2.3), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -919,89 +930,91 @@ r-bioc-limma_3.16.3~dfsg-1_kfreebsd-i386.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 13:05 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 13:05 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 2046 2013-05-17 13:05 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 988 2013-05-17 13:05 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 1065 2013-05-17 13:05 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6371 2013-05-17 13:06 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5941 2013-05-17 13:06 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 3084 2013-05-17 13:06 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 217 2013-05-17 13:06 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 539 2013-05-17 13:06 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 7892 2013-05-17 13:06 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2013-05-17 13:05 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 1056 2013-05-17 13:05 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 205812 2013-05-17 13:05 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 4106 2013-05-17 13:05 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 102936 2013-05-17 13:05 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 673 2013-05-17 13:05 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 1711 2013-05-17 13:05 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 45597 2013-05-17 13:05 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 806089 2013-05-17 13:05 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 963 2013-05-17 13:05 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 11214 2013-05-17 13:05 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1415 2013-05-17 13:05 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 495793 2013-05-17 13:06 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3416 2013-05-17 13:06 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6703 2013-05-17 13:06 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2565 2013-05-17 13:06 ./usr/lib/R/site-library/limma/help/aliases.rds
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 37337 2013-05-17 13:06 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2013-05-17 13:06 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 10085 2013-05-17 13:06 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/share/doc/r-bioc-limma/
-drwxr-xr-x root/root 0 2013-05-17 13:06 ./usr/share/doc/r-bioc-limma/tests/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 2095 2013-08-04 09:39 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 967 2013-08-04 09:39 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 1057 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 6386 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5952 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 3098 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 219 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 542 2013-08-04 09:39 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 7740 2013-08-04 09:39 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 1056 2013-08-04 09:39 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 207870 2013-08-04 09:39 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 4133 2013-08-04 09:39 ./usr/lib/R/site-library/limma/R/limma.rdx
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 104280 2013-08-04 09:39 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 673 2013-08-04 09:39 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 1711 2013-08-04 09:39 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 45597 2013-08-04 09:39 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 963 2013-08-04 09:39 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 11214 2013-08-04 09:39 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1393 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 492983 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 3432 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 6742 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 2577 2013-08-04 09:39 ./usr/lib/R/site-library/limma/help/aliases.rds
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 37564 2013-08-04 09:39 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2013-08-04 09:39 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 10085 2013-08-04 09:39 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/share/doc/r-bioc-limma/
+drwxr-xr-x root/root 0 2013-08-04 09:39 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-ki-sbuild-1368795825-47558/build/buildd-r-bioc-limma_3.16.3~dfsg-1-kfreebsd-i386-D30Vqd
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: kfreebsd-i386
-Build-Space: 5576
-Build-Time: 25
+Build Architecture: kfreebsd-i386
+Build-Space: 3210
+Build-Time: 28
Distribution: sid
-Install-Time: 60
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: kfreebsd-i386
+Install-Time: 82
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: kfreebsd-i386
Package: r-bioc-limma
-Package-Time: 145
-Source-Version: 3.16.3~dfsg-1
-Space: 5576
+Package-Time: 174
+Source-Version: 3.16.7~dfsg-1
+Space: 3210
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1306
-Build needed 00:02:25, 5576k disc space
+Finished at 20130804-0939
+Build needed 00:02:54, 3210k disc space
Signature with key 'B31C365A' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_kfreebsd-i386.changes B31C365A
+
+Successfully signed changes file
diff --git a/mips.log b/mips.log
index 2a41441..ec453e8 100644
--- a/mips.log
+++ b/mips.log
@@ -1,63 +1,76 @@
-From buildd2 at lucatelli.debian.org Fri May 17 14:56:47 2013
+From buildd2 at lucatelli.debian.org Sun Aug 04 10:23:23 2013
Return-path: <buildd2 at lucatelli.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+Received: from muffat.debian.org ([206.12.19.146])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
- by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
+ CN=muffat.debian.org, EMAIL=hostmaster at muffat.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
(Exim 4.72) (envelope-from <buildd2 at lucatelli.debian.org>)
- id 1UdM5P-0005Ol-5K
- for logs at buildd.debian.org; Fri, 17 May 2013 14:56:47 +0000
+ id 1V5vT8-00072p-RS
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:23:23 +0000
Received: from lucatelli.debian.org ([2607:f8f0:610:4000:2e0:98ff:fe00:4141])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=lucatelli.debian.org,
EMAIL=hostmaster at lucatelli.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd2 at lucatelli.debian.org>)
- id 1UdM5N-00021O-Qz
- for logs at buildd.debian.org; Fri, 17 May 2013 14:56:46 +0000
-Received: from buildd2 by lucatelli.debian.org with local (Exim 4.72)
- (envelope-from <buildd2 at lucatelli.debian.org>) id 1UdLoZ-0001IQ-6m
- for logs at buildd.debian.org; Fri, 17 May 2013 14:39:23 +0000
-Date: Fri, 17 May 2013 14:39:23 +0000
-Message-Id: <E1UdLoZ-0001IQ-6m at lucatelli.debian.org>
+ by muffat.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
+ (Exim 4.80) (envelope-from <buildd2 at lucatelli.debian.org>)
+ id 1V5vT6-0003bA-7F
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:23:20 +0000
+Received: from buildd2 by lucatelli.debian.org with local (Exim 4.80)
+ (envelope-from <buildd2 at lucatelli.debian.org>) id 1V5vT3-0003O2-Gx
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:23:17 +0000
+Content-Transfer-Encoding: binary
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 10:23:16 +0000
From: buildd on lucatelli <buildd2 at lucatelli.debian.org>
To: logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on mips
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on mips
(dist=sid)
-Content-Type: text/plain; charset=UTF-8
-Content-Transfer-Encoding: 8bit
+Key-Id: A2DB4074
+Message-Id: <E1V5vT3-0003O2-Gx at lucatelli.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on lucatelli.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on lucatelli.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (mips) 17 May 2013 14:28 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (mips) 04 Aug 2013 10:12 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: mips
-Get:1 http://mirror-ubc.debian.org unstable InRelease [205 kB]
-Get:2 http://incoming.debian.org unstable InRelease [205 kB]
-Get:3 http://mirror-ubc.debian.org unstable/main Sources [6729 kB]
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: mips
+Host Architecture: mips
+Build Architecture: mips
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-dpaBIn/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-dpaBIn' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-mips-sbuild-868f4850-163b-4ff8-adce-1a4f0eccc85e' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://mirror-ubc.debian.org unstable InRelease [204 kB]
+Get:2 http://incoming.debian.org unstable InRelease [204 kB]
+Get:3 http://mirror-ubc.debian.org unstable/main Sources [8616 kB]
Get:4 http://incoming.debian.org buildd-unstable InRelease [111 kB]
-Get:5 http://incoming.debian.org unstable/main Sources [6729 kB]
-Get:6 http://mirror-ubc.debian.org unstable/contrib Sources [53.7 kB]
-Get:7 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:8 http://mirror-ubc.debian.org unstable/non-free Sources [103 kB]
-Get:9 http://mirror-ubc.debian.org unstable/main mips Packages [6204 kB]
-Get:10 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:11 http://incoming.debian.org unstable/main mips Packages [6204 kB]
-Get:12 http://mirror-ubc.debian.org unstable/contrib mips Packages [37.4 kB]
-Get:13 http://incoming.debian.org unstable/contrib mips Packages [37.4 kB]
-Get:14 http://incoming.debian.org buildd-unstable/main Sources [104 kB]
-Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [873 B]
-Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2683 B]
-Get:17 http://incoming.debian.org buildd-unstable/main mips Packages [55.6 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib mips Packages [14 B]
-Fetched 26.9 MB in 1min 51s (241 kB/s)
+Get:5 http://incoming.debian.org unstable/main Sources [8616 kB]
+Get:6 http://mirror-ubc.debian.org unstable/contrib Sources [65.0 kB]
+Get:7 http://mirror-ubc.debian.org unstable/non-free Sources [126 kB]
+Get:8 http://mirror-ubc.debian.org unstable/main mips Packages [8167 kB]
+Get:9 http://incoming.debian.org unstable/contrib Sources [65.0 kB]
+Get:10 http://incoming.debian.org unstable/non-free Sources [126 kB]
+Get:11 http://incoming.debian.org unstable/main mips Packages [8167 kB]
+Get:12 http://mirror-ubc.debian.org unstable/contrib mips Packages [45.3 kB]
+Get:13 http://incoming.debian.org unstable/contrib mips Packages [45.3 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [124 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [680 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2595 B]
+Get:17 http://incoming.debian.org buildd-unstable/main mips Packages [73.5 kB]
+Get:18 http://incoming.debian.org buildd-unstable/contrib mips Packages [20 B]
+Fetched 34.8 MB in 47s (728 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -77,100 +90,81 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://mirror-ubc.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://mirror-ubc.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://mirror-ubc.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 2s (510 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (289 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-M5iHSG/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: already installed (1.19-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
-Removing negative dependencies:
+The following package was automatically installed and is no longer required:
+ gcc-4.6-base
+Use 'apt-get autoremove' to remove it.
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 20 not upgraded.
+Need to get 0 B/710 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 10908 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-IB2OyG/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.2)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-1)
-bsdutils: already installed (1:2.20.1-5.4)
-coreutils: already installed (8.20-3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.17-2)
-login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.4)
-ncurses-base: already installed (5.9+20130504-1)
-ncurses-bin: already installed (5.9+20130504-1)
-perl-base: already installed (5.14.2-21)
-sed: already installed (4.2.2-1)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-5)
-util-linux: already installed (2.20.1-5.4)
-libc6-dev: already installed (2.17-2)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130516
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
+The following package was automatically installed and is no longer required:
+ gcc-4.6-base
+Use 'apt-get autoremove' to remove it.
The following extra packages will be installed:
- bsdmainutils file fontconfig fontconfig-config fonts-dejavu-core gettext
- gettext-base gfortran gfortran-4.6 groff-base html2text intltool-debian
- libasprintf-dev libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
- libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1 libfreetype6
- libgettextpo-dev libgettextpo0 libgfortran3 libglib2.0-0 libice6 libjbig0
+ bsdmainutils cdbs debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0
libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
+ libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
+ libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
+ libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
+ libtiff5 libtinfo-dev libudev0 libunistring0 libwayland-client0
+ libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0
+ libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1
+ libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1
+ libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core r-base-dev tcl8.5
+ tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
wamerican wordlist whois vacation devscripts dh-make gettext-doc
- gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc
+ gfortran-multilib gfortran-doc gfortran-4.8-multilib gfortran-4.8-doc
libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
@@ -178,178 +172,232 @@ Suggested packages:
texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
- fonts-dejavu-core gettext gettext-base gfortran gfortran-4.6 groff-base
- html2text intltool-debian libasprintf-dev libasprintf0c2 libblas-dev
- libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi6
- libfontconfig1 libfreetype6 libgettextpo-dev libgettextpo0 libgfortran3
- libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3
- libmagic1 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1
- libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
- libtinfo-dev libunistring0 libx11-6 libx11-data libxau6 libxcb-render0
- libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1
- libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core
- ucf unzip x11-common xdg-utils zip zlib1g-dev
-0 upgraded, 81 newly installed, 0 to remove and 0 not upgraded.
-Need to get 56.7 MB of archives.
-After this operation, 122 MB of additional disk space will be used.
-Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libcroco3 mips 0.6.8-2 [119 kB]
-Get:2 http://mirror-ubc.debian.org/debian/ unstable/main libpipeline1 mips 1.2.3-1 [37.7 kB]
-Get:3 http://mirror-ubc.debian.org/debian/ unstable/main groff-base mips 1.22.2-2 [708 kB]
-Get:4 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-base-core mips 3.0.1-1 [21.0 MB]
-Get:5 http://mirror-ubc.debian.org/debian/ unstable/main bsdmainutils mips 9.0.5 [210 kB]
-Get:6 http://mirror-ubc.debian.org/debian/ unstable/main man-db mips 2.6.3-6 [868 kB]
-Get:7 http://mirror-ubc.debian.org/debian/ unstable/main libasprintf0c2 mips 0.18.1.1-10 [27.1 kB]
-Get:8 http://mirror-ubc.debian.org/debian/ unstable/main libmagic1 mips 1:5.14-1 [216 kB]
-Get:9 http://mirror-ubc.debian.org/debian/ unstable/main libxml2 mips 2.8.0+dfsg1-7+nmu1 [870 kB]
-Get:10 http://mirror-ubc.debian.org/debian/ unstable/main libexpat1 mips 2.1.0-3 [145 kB]
-Get:11 http://mirror-ubc.debian.org/debian/ unstable/main libfreetype6 mips 2.4.9-1.1 [433 kB]
-Get:12 http://mirror-ubc.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:13 http://mirror-ubc.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:14 http://mirror-ubc.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:15 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:16 http://mirror-ubc.debian.org/debian/ unstable/main libfontconfig1 mips 2.9.0-7.1 [302 kB]
-Get:17 http://mirror-ubc.debian.org/debian/ unstable/main libpixman-1-0 mips 0.26.0-4 [383 kB]
-Get:18 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-0 mips 1.2.49-4 [184 kB]
-Get:19 http://mirror-ubc.debian.org/debian/ unstable/main libxau6 mips 1:1.0.7-1 [18.3 kB]
-Get:20 http://mirror-ubc.debian.org/debian/ unstable/main libxdmcp6 mips 1:1.1.1-1 [25.5 kB]
-Get:21 http://mirror-ubc.debian.org/debian/ unstable/main libxcb1 mips 1.8.1-2 [41.6 kB]
-Get:22 http://mirror-ubc.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:23 http://mirror-ubc.debian.org/debian/ unstable/main libx11-6 mips 2:1.5.0-1 [870 kB]
-Get:24 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-render0 mips 1.8.1-2 [16.3 kB]
-Get:25 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-shm0 mips 1.8.1-2 [10.1 kB]
-Get:26 http://mirror-ubc.debian.org/debian/ unstable/main libxext6 mips 2:1.3.1-2 [51.4 kB]
-Get:27 http://mirror-ubc.debian.org/debian/ unstable/main libxrender1 mips 1:0.9.7-1 [30.6 kB]
-Get:28 http://mirror-ubc.debian.org/debian/ unstable/main libcairo2 mips 1.12.14-4 [1012 kB]
-Get:29 http://mirror-ubc.debian.org/debian/ unstable/main libffi6 mips 3.0.13-4 [19.9 kB]
-Get:30 http://mirror-ubc.debian.org/debian/ unstable/main libglib2.0-0 mips 2.36.1-2build1 [1891 kB]
-Get:31 http://mirror-ubc.debian.org/debian/ unstable/main libdatrie1 mips 0.2.6-2 [29.1 kB]
-Get:32 http://mirror-ubc.debian.org/debian/ unstable/main libunistring0 mips 0.9.3-5 [411 kB]
-Get:33 http://mirror-ubc.debian.org/debian/ unstable/main libgettextpo0 mips 0.18.1.1-10 [140 kB]
-Get:34 http://mirror-ubc.debian.org/debian/ unstable/main libgfortran3 mips 4.8.0-7 [237 kB]
-Get:35 http://mirror-ubc.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:36 http://mirror-ubc.debian.org/debian/ unstable/main libice6 mips 2:1.0.8-2 [56.5 kB]
-Get:37 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8 mips 8d-1 [146 kB]
-Get:38 http://mirror-ubc.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:39 http://mirror-ubc.debian.org/debian/ unstable/main libthai0 mips 0.1.19-2 [41.4 kB]
-Get:40 http://mirror-ubc.debian.org/debian/ unstable/main libxft2 mips 2.3.1-1 [59.8 kB]
-Get:41 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig mips 2.9.0-7.1 [347 kB]
-Get:42 http://mirror-ubc.debian.org/debian/ unstable/main libpango1.0-0 mips 1.30.0-1 [440 kB]
-Get:43 http://mirror-ubc.debian.org/debian/ unstable/main libpaper1 mips 1.1.24+nmu2 [21.5 kB]
-Get:44 http://mirror-ubc.debian.org/debian/ unstable/main libpcrecpp0 mips 1:8.31-2 [128 kB]
-Get:45 http://mirror-ubc.debian.org/debian/ unstable/main libsm6 mips 2:1.2.1-2 [32.6 kB]
-Get:46 http://mirror-ubc.debian.org/debian/ unstable/main libjbig0 mips 2.0-2 [32.5 kB]
-Get:47 http://mirror-ubc.debian.org/debian/ unstable/main libtiff5 mips 4.0.2-6 [229 kB]
-Get:48 http://mirror-ubc.debian.org/debian/ unstable/main libxss1 mips 1:1.2.2-1 [17.3 kB]
-Get:49 http://mirror-ubc.debian.org/debian/ unstable/main libxt6 mips 1:1.1.3-1 [192 kB]
-Get:50 http://mirror-ubc.debian.org/debian/ unstable/main file mips 1:5.14-1 [53.8 kB]
-Get:51 http://mirror-ubc.debian.org/debian/ unstable/main gettext-base mips 0.18.1.1-10 [141 kB]
-Get:52 http://mirror-ubc.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:53 http://mirror-ubc.debian.org/debian/ unstable/main html2text mips 1.3.2a-15 [103 kB]
-Get:54 http://mirror-ubc.debian.org/debian/ unstable/main libasprintf-dev mips 0.18.1.1-10 [26.9 kB]
-Get:55 http://mirror-ubc.debian.org/debian/ unstable/main libgettextpo-dev mips 0.18.1.1-10 [189 kB]
-Get:56 http://mirror-ubc.debian.org/debian/ unstable/main gettext mips 0.18.1.1-10 [1753 kB]
-Get:57 http://mirror-ubc.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:58 http://mirror-ubc.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:59 http://mirror-ubc.debian.org/debian/ unstable/main debhelper all 9.20130516 [708 kB]
-Get:60 http://mirror-ubc.debian.org/debian/ unstable/main gfortran-4.6 mips 4.6.4-2 [4302 kB]
-Get:61 http://mirror-ubc.debian.org/debian/ unstable/main gfortran mips 4:4.6.3-8 [1136 B]
-Get:62 http://mirror-ubc.debian.org/debian/ unstable/main libblas3 mips 1.2.20110419-5 [201 kB]
-Get:63 http://mirror-ubc.debian.org/debian/ unstable/main libblas-dev mips 1.2.20110419-5 [241 kB]
-Get:64 http://mirror-ubc.debian.org/debian/ unstable/main libbz2-dev mips 1.0.6-4 [37.2 kB]
-Get:65 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8-dev mips 8d-1 [258 kB]
-Get:66 http://mirror-ubc.debian.org/debian/ unstable/main liblapack3 mips 3.4.2+dfsg-1 [4361 kB]
-Get:67 http://mirror-ubc.debian.org/debian/ unstable/main liblapack-dev mips 3.4.2+dfsg-1 [5141 kB]
-Get:68 http://mirror-ubc.debian.org/debian/ unstable/main libtinfo-dev mips 5.9+20130504-1 [108 kB]
-Get:69 http://mirror-ubc.debian.org/debian/ unstable/main libncurses5-dev mips 5.9+20130504-1 [226 kB]
-Get:70 http://mirror-ubc.debian.org/debian/ unstable/main libpaper-utils mips 1.1.24+nmu2 [18.3 kB]
-Get:71 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3-dev mips 1:8.31-2 [367 kB]
-Get:72 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g-dev mips 1:1.2.8.dfsg-1 [217 kB]
-Get:73 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-dev mips 1.2.49-4 [275 kB]
-Get:74 http://mirror-ubc.debian.org/debian/ unstable/main libreadline6-dev mips 6.2+dfsg-0.1 [198 kB]
-Get:75 http://mirror-ubc.debian.org/debian/ unstable/main libreadline-dev mips 6.2+dfsg-0.1 [894 B]
-Get:76 http://mirror-ubc.debian.org/debian/ unstable/main zip mips 3.0-7 [332 kB]
-Get:77 http://mirror-ubc.debian.org/debian/ unstable/main unzip mips 6.0-9 [189 kB]
-Get:78 http://mirror-ubc.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:79 http://mirror-ubc.debian.org/debian/ unstable/main tcl8.5 mips 8.5.11-2 [1617 kB]
-Get:80 http://mirror-ubc.debian.org/debian/ unstable/main tk8.5 mips 8.5.11-2 [1175 kB]
-Get:81 http://mirror-ubc.debian.org/debian/ unstable/main r-base-dev all 3.0.1~20130512-1 [3910 B]
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0
+ libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
+ libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
+ libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
+ libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
+ libtiff5 libtinfo-dev libudev0 libunistring0 libwayland-client0
+ libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0
+ libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1
+ libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1
+ libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
+0 upgraded, 99 newly installed, 0 to remove and 20 not upgraded.
+Need to get 61.1 MB/61.1 MB of archives.
+After this operation, 134 MB of additional disk space will be used.
+Get:1 http://mirror-ubc.debian.org/debian/ unstable/main libpipeline1 mips 1.2.4-1 [38.2 kB]
+Get:2 http://mirror-ubc.debian.org/debian/ unstable/main libudev0 mips 175-7.2 [124 kB]
+Get:3 http://mirror-ubc.debian.org/debian/ unstable/main groff-base mips 1.22.2-3 [708 kB]
+Get:4 http://mirror-ubc.debian.org/debian/ unstable/main bsdmainutils mips 9.0.5 [210 kB]
+Get:5 http://mirror-ubc.debian.org/debian/ unstable/main man-db mips 2.6.5-2 [949 kB]
+Get:6 http://mirror-ubc.debian.org/debian/ unstable/main libasprintf0c2 mips 0.18.3-1 [29.7 kB]
+Get:7 http://mirror-ubc.debian.org/debian/ unstable/main libmagic1 mips 1:5.14-2 [216 kB]
+Get:8 http://mirror-ubc.debian.org/debian/ unstable/main libxml2 mips 2.9.1+dfsg1-2 [883 kB]
+Get:9 http://mirror-ubc.debian.org/debian/ unstable/main libdrm2 mips 2.4.45-3 [465 kB]
+Get:10 http://mirror-ubc.debian.org/debian/ unstable/main libglapi-mesa mips 9.1.4-1 [62.3 kB]
+Get:11 http://mirror-ubc.debian.org/debian/ unstable/main libxau6 mips 1:1.0.8-1 [20.3 kB]
+Get:12 http://mirror-ubc.debian.org/debian/ unstable/main libxdmcp6 mips 1:1.1.1-1 [25.5 kB]
+Get:13 http://mirror-ubc.debian.org/debian/ unstable/main libxcb1 mips 1.9.1-3 [42.1 kB]
+Get:14 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-dri2-0 mips 1.9.1-3 [12.2 kB]
+Get:15 http://mirror-ubc.debian.org/debian/ unstable/main libgbm1 mips 9.1.4-1 [344 kB]
+Get:16 http://mirror-ubc.debian.org/debian/ unstable/main libffi6 mips 3.0.13-4 [19.9 kB]
+Get:17 http://mirror-ubc.debian.org/debian/ unstable/main libwayland-client0 mips 1.1.0-2 [20.8 kB]
+Get:18 http://mirror-ubc.debian.org/debian/ unstable/main libwayland-server0 mips 1.1.0-2 [28.6 kB]
+Get:19 http://mirror-ubc.debian.org/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:20 http://mirror-ubc.debian.org/debian/ unstable/main libx11-6 mips 2:1.6.0-1 [886 kB]
+Get:21 http://mirror-ubc.debian.org/debian/ unstable/main libx11-xcb1 mips 2:1.6.0-1 [154 kB]
+Get:22 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-render0 mips 1.9.1-3 [16.8 kB]
+Get:23 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-shape0 mips 1.9.1-3 [11.0 kB]
+Get:24 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-xfixes0 mips 1.9.1-3 [13.6 kB]
+Get:25 http://mirror-ubc.debian.org/debian/ unstable/main libegl1-mesa mips 9.1.4-1 [74.1 kB]
+Get:26 http://mirror-ubc.debian.org/debian/ unstable/main libexpat1 mips 2.1.0-4 [142 kB]
+Get:27 http://mirror-ubc.debian.org/debian/ unstable/main libfreetype6 mips 2.4.9-1.1 [433 kB]
+Get:28 http://mirror-ubc.debian.org/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:29 http://mirror-ubc.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:30 http://mirror-ubc.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:31 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:32 http://mirror-ubc.debian.org/debian/ unstable/main libfontconfig1 mips 2.10.2-2 [319 kB]
+Get:33 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-glx0 mips 1.9.1-3 [25.7 kB]
+Get:34 http://mirror-ubc.debian.org/debian/ unstable/main libxfixes3 mips 1:5.0.1-1 [21.7 kB]
+Get:35 http://mirror-ubc.debian.org/debian/ unstable/main libxdamage1 mips 1:1.1.4-1 [14.9 kB]
+Get:36 http://mirror-ubc.debian.org/debian/ unstable/main libxext6 mips 2:1.3.2-1 [52.1 kB]
+Get:37 http://mirror-ubc.debian.org/debian/ unstable/main libxxf86vm1 mips 1:1.1.2-1+deb7u1 [18.8 kB]
+Get:38 http://mirror-ubc.debian.org/debian/ unstable/main libgl1-mesa-glx mips 9.1.4-1 [116 kB]
+Get:39 http://mirror-ubc.debian.org/debian/ unstable/main libpixman-1-0 mips 0.26.0-4 [383 kB]
+Get:40 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-0 mips 1.2.49-4 [184 kB]
+Get:41 http://mirror-ubc.debian.org/debian/ unstable/main libxcb-shm0 mips 1.9.1-3 [10.6 kB]
+Get:42 http://mirror-ubc.debian.org/debian/ unstable/main libxrender1 mips 1:0.9.8-1 [31.6 kB]
+Get:43 http://mirror-ubc.debian.org/debian/ unstable/main libcairo2 mips 1.12.14-5 [1050 kB]
+Get:44 http://mirror-ubc.debian.org/debian/ unstable/main libglib2.0-0 mips 2.36.3-3 [1873 kB]
+Get:45 http://mirror-ubc.debian.org/debian/ unstable/main libcroco3 mips 0.6.8-2 [119 kB]
+Get:46 http://mirror-ubc.debian.org/debian/ unstable/main libdatrie1 mips 0.2.6-2 [29.1 kB]
+Get:47 http://mirror-ubc.debian.org/debian/ unstable/main libgfortran3 mips 4.8.1-5 [232 kB]
+Get:48 http://mirror-ubc.debian.org/debian/ unstable/main libgraphite2-3 mips 1.2.3-1 [60.4 kB]
+Get:49 http://mirror-ubc.debian.org/debian/ unstable/main libharfbuzz0a mips 0.9.19-1 [438 kB]
+Get:50 http://mirror-ubc.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:51 http://mirror-ubc.debian.org/debian/ unstable/main libice6 mips 2:1.0.8-2 [56.5 kB]
+Get:52 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8 mips 8d-1 [146 kB]
+Get:53 http://mirror-ubc.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:54 http://mirror-ubc.debian.org/debian/ unstable/main libthai0 mips 0.1.19-2 [41.4 kB]
+Get:55 http://mirror-ubc.debian.org/debian/ unstable/main fontconfig mips 2.10.2-2 [375 kB]
+Get:56 http://mirror-ubc.debian.org/debian/ unstable/main libpango-1.0-0 mips 1.32.5-5+b1 [251 kB]
+Get:57 http://mirror-ubc.debian.org/debian/ unstable/main libpangoft2-1.0-0 mips 1.32.5-5+b1 [183 kB]
+Get:58 http://mirror-ubc.debian.org/debian/ unstable/main libpangocairo-1.0-0 mips 1.32.5-5+b1 [172 kB]
+Get:59 http://mirror-ubc.debian.org/debian/ unstable/main libpaper1 mips 1.1.24+nmu2 [21.5 kB]
+Get:60 http://mirror-ubc.debian.org/debian/ unstable/main libpcrecpp0 mips 1:8.31-2 [128 kB]
+Get:61 http://mirror-ubc.debian.org/debian/ unstable/main libsm6 mips 2:1.2.1-2 [32.6 kB]
+Get:62 http://mirror-ubc.debian.org/debian/ unstable/main libjbig0 mips 2.0-2 [32.5 kB]
+Get:63 http://mirror-ubc.debian.org/debian/ unstable/main libtiff5 mips 4.0.3-1 [229 kB]
+Get:64 http://mirror-ubc.debian.org/debian/ unstable/main libunistring0 mips 0.9.3-5 [411 kB]
+Get:65 http://mirror-ubc.debian.org/debian/ unstable/main libxft2 mips 2.3.1-1 [59.8 kB]
+Get:66 http://mirror-ubc.debian.org/debian/ unstable/main libxss1 mips 1:1.2.2-1 [17.3 kB]
+Get:67 http://mirror-ubc.debian.org/debian/ unstable/main libxt6 mips 1:1.1.3-1+deb7u1 [192 kB]
+Get:68 http://mirror-ubc.debian.org/debian/ unstable/main file mips 1:5.14-2 [53.8 kB]
+Get:69 http://mirror-ubc.debian.org/debian/ unstable/main gettext-base mips 0.18.3-1 [161 kB]
+Get:70 http://mirror-ubc.debian.org/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:71 http://mirror-ubc.debian.org/debian/ unstable/main gettext mips 0.18.3-1 [1867 kB]
+Get:72 http://mirror-ubc.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:73 http://mirror-ubc.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:74 http://mirror-ubc.debian.org/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:75 http://mirror-ubc.debian.org/debian/ unstable/main libgfortran-4.8-dev mips 4.8.1-5 [358 kB]
+Get:76 http://mirror-ubc.debian.org/debian/ unstable/main gfortran-4.8 mips 4.8.1-5 [6229 kB]
+Get:77 http://mirror-ubc.debian.org/debian/ unstable/main gfortran mips 4:4.8.1-2 [1132 B]
+Get:78 http://mirror-ubc.debian.org/debian/ unstable/main libblas3 mips 1.2.20110419-5 [201 kB]
+Get:79 http://mirror-ubc.debian.org/debian/ unstable/main libblas-dev mips 1.2.20110419-5 [241 kB]
+Get:80 http://mirror-ubc.debian.org/debian/ unstable/main libbz2-dev mips 1.0.6-4 [37.2 kB]
+Get:81 http://mirror-ubc.debian.org/debian/ unstable/main libjpeg8-dev mips 8d-1 [258 kB]
+Get:82 http://mirror-ubc.debian.org/debian/ unstable/main liblapack3 mips 3.4.2+dfsg-1 [4361 kB]
+Get:83 http://mirror-ubc.debian.org/debian/ unstable/main liblapack-dev mips 3.4.2+dfsg-1 [5141 kB]
+Get:84 http://mirror-ubc.debian.org/debian/ unstable/main libtinfo-dev mips 5.9+20130608-1 [107 kB]
+Get:85 http://mirror-ubc.debian.org/debian/ unstable/main libncurses5-dev mips 5.9+20130608-1 [225 kB]
+Get:86 http://mirror-ubc.debian.org/debian/ unstable/main libpaper-utils mips 1.1.24+nmu2 [18.3 kB]
+Get:87 http://mirror-ubc.debian.org/debian/ unstable/main libpcre3-dev mips 1:8.31-2 [367 kB]
+Get:88 http://mirror-ubc.debian.org/debian/ unstable/main zlib1g-dev mips 1:1.2.8.dfsg-1 [217 kB]
+Get:89 http://mirror-ubc.debian.org/debian/ unstable/main libpng12-dev mips 1.2.49-4 [275 kB]
+Get:90 http://mirror-ubc.debian.org/debian/ unstable/main libreadline6-dev mips 6.2+dfsg-0.1 [198 kB]
+Get:91 http://mirror-ubc.debian.org/debian/ unstable/main libreadline-dev mips 6.2+dfsg-0.1 [894 B]
+Get:92 http://mirror-ubc.debian.org/debian/ unstable/main zip mips 3.0-7 [332 kB]
+Get:93 http://mirror-ubc.debian.org/debian/ unstable/main unzip mips 6.0-9 [189 kB]
+Get:94 http://mirror-ubc.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:95 http://mirror-ubc.debian.org/debian/ unstable/main tcl8.5 mips 8.5.14-2 [1629 kB]
+Get:96 http://mirror-ubc.debian.org/debian/ unstable/main tk8.5 mips 8.5.14-2 [1183 kB]
+Get:97 http://mirror-ubc.debian.org/debian/ unstable/main r-base-core mips 3.0.1-6 [21.0 MB]
+Get:98 http://mirror-ubc.debian.org/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 56.7 MB in 33s (1690 kB/s)
+Fetched 61.1 MB in 23s (2602 kB/s)
Selecting previously unselected package libpipeline1:mips.
-(Reading database ... 10865 files and directories currently installed.)
-Unpacking libpipeline1:mips (from .../libpipeline1_1.2.3-1_mips.deb) ...
+(Reading database ... 10908 files and directories currently installed.)
+Unpacking libpipeline1:mips (from .../libpipeline1_1.2.4-1_mips.deb) ...
+Selecting previously unselected package libudev0:mips.
+Unpacking libudev0:mips (from .../libudev0_175-7.2_mips.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_mips.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_mips.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_mips.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_mips.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_mips.deb) ...
Selecting previously unselected package libasprintf0c2:mips.
-Unpacking libasprintf0c2:mips (from .../libasprintf0c2_0.18.1.1-10_mips.deb) ...
+Unpacking libasprintf0c2:mips (from .../libasprintf0c2_0.18.3-1_mips.deb) ...
Selecting previously unselected package libmagic1:mips.
-Unpacking libmagic1:mips (from .../libmagic1_1%3a5.14-1_mips.deb) ...
+Unpacking libmagic1:mips (from .../libmagic1_1%3a5.14-2_mips.deb) ...
Selecting previously unselected package libxml2:mips.
-Unpacking libxml2:mips (from .../libxml2_2.8.0+dfsg1-7+nmu1_mips.deb) ...
+Unpacking libxml2:mips (from .../libxml2_2.9.1+dfsg1-2_mips.deb) ...
+Selecting previously unselected package libdrm2:mips.
+Unpacking libdrm2:mips (from .../libdrm2_2.4.45-3_mips.deb) ...
+Selecting previously unselected package libglapi-mesa:mips.
+Unpacking libglapi-mesa:mips (from .../libglapi-mesa_9.1.4-1_mips.deb) ...
+Selecting previously unselected package libxau6:mips.
+Unpacking libxau6:mips (from .../libxau6_1%3a1.0.8-1_mips.deb) ...
+Selecting previously unselected package libxdmcp6:mips.
+Unpacking libxdmcp6:mips (from .../libxdmcp6_1%3a1.1.1-1_mips.deb) ...
+Selecting previously unselected package libxcb1:mips.
+Unpacking libxcb1:mips (from .../libxcb1_1.9.1-3_mips.deb) ...
+Selecting previously unselected package libxcb-dri2-0:mips.
+Unpacking libxcb-dri2-0:mips (from .../libxcb-dri2-0_1.9.1-3_mips.deb) ...
+Selecting previously unselected package libgbm1:mips.
+Unpacking libgbm1:mips (from .../libgbm1_9.1.4-1_mips.deb) ...
+Selecting previously unselected package libffi6:mips.
+Unpacking libffi6:mips (from .../libffi6_3.0.13-4_mips.deb) ...
+Selecting previously unselected package libwayland-client0:mips.
+Unpacking libwayland-client0:mips (from .../libwayland-client0_1.1.0-2_mips.deb) ...
+Selecting previously unselected package libwayland-server0:mips.
+Unpacking libwayland-server0:mips (from .../libwayland-server0_1.1.0-2_mips.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:mips.
+Unpacking libx11-6:mips (from .../libx11-6_2%3a1.6.0-1_mips.deb) ...
+Selecting previously unselected package libx11-xcb1:mips.
+Unpacking libx11-xcb1:mips (from .../libx11-xcb1_2%3a1.6.0-1_mips.deb) ...
+Selecting previously unselected package libxcb-render0:mips.
+Unpacking libxcb-render0:mips (from .../libxcb-render0_1.9.1-3_mips.deb) ...
+Selecting previously unselected package libxcb-shape0:mips.
+Unpacking libxcb-shape0:mips (from .../libxcb-shape0_1.9.1-3_mips.deb) ...
+Selecting previously unselected package libxcb-xfixes0:mips.
+Unpacking libxcb-xfixes0:mips (from .../libxcb-xfixes0_1.9.1-3_mips.deb) ...
+Selecting previously unselected package libegl1-mesa:mips.
+Unpacking libegl1-mesa:mips (from .../libegl1-mesa_9.1.4-1_mips.deb) ...
Selecting previously unselected package libexpat1:mips.
-Unpacking libexpat1:mips (from .../libexpat1_2.1.0-3_mips.deb) ...
+Unpacking libexpat1:mips (from .../libexpat1_2.1.0-4_mips.deb) ...
Selecting previously unselected package libfreetype6:mips.
Unpacking libfreetype6:mips (from .../libfreetype6_2.4.9-1.1_mips.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:mips.
-Unpacking libfontconfig1:mips (from .../libfontconfig1_2.9.0-7.1_mips.deb) ...
+Unpacking libfontconfig1:mips (from .../libfontconfig1_2.10.2-2_mips.deb) ...
+Selecting previously unselected package libxcb-glx0:mips.
+Unpacking libxcb-glx0:mips (from .../libxcb-glx0_1.9.1-3_mips.deb) ...
+Selecting previously unselected package libxfixes3:mips.
+Unpacking libxfixes3:mips (from .../libxfixes3_1%3a5.0.1-1_mips.deb) ...
+Selecting previously unselected package libxdamage1:mips.
+Unpacking libxdamage1:mips (from .../libxdamage1_1%3a1.1.4-1_mips.deb) ...
+Selecting previously unselected package libxext6:mips.
+Unpacking libxext6:mips (from .../libxext6_2%3a1.3.2-1_mips.deb) ...
+Selecting previously unselected package libxxf86vm1:mips.
+Unpacking libxxf86vm1:mips (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_mips.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:mips.
+Unpacking libgl1-mesa-glx:mips (from .../libgl1-mesa-glx_9.1.4-1_mips.deb) ...
Selecting previously unselected package libpixman-1-0:mips.
Unpacking libpixman-1-0:mips (from .../libpixman-1-0_0.26.0-4_mips.deb) ...
Selecting previously unselected package libpng12-0:mips.
Unpacking libpng12-0:mips (from .../libpng12-0_1.2.49-4_mips.deb) ...
-Selecting previously unselected package libxau6:mips.
-Unpacking libxau6:mips (from .../libxau6_1%3a1.0.7-1_mips.deb) ...
-Selecting previously unselected package libxdmcp6:mips.
-Unpacking libxdmcp6:mips (from .../libxdmcp6_1%3a1.1.1-1_mips.deb) ...
-Selecting previously unselected package libxcb1:mips.
-Unpacking libxcb1:mips (from .../libxcb1_1.8.1-2_mips.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:mips.
-Unpacking libx11-6:mips (from .../libx11-6_2%3a1.5.0-1_mips.deb) ...
-Selecting previously unselected package libxcb-render0:mips.
-Unpacking libxcb-render0:mips (from .../libxcb-render0_1.8.1-2_mips.deb) ...
Selecting previously unselected package libxcb-shm0:mips.
-Unpacking libxcb-shm0:mips (from .../libxcb-shm0_1.8.1-2_mips.deb) ...
-Selecting previously unselected package libxext6:mips.
-Unpacking libxext6:mips (from .../libxext6_2%3a1.3.1-2_mips.deb) ...
+Unpacking libxcb-shm0:mips (from .../libxcb-shm0_1.9.1-3_mips.deb) ...
Selecting previously unselected package libxrender1:mips.
-Unpacking libxrender1:mips (from .../libxrender1_1%3a0.9.7-1_mips.deb) ...
+Unpacking libxrender1:mips (from .../libxrender1_1%3a0.9.8-1_mips.deb) ...
Selecting previously unselected package libcairo2:mips.
-Unpacking libcairo2:mips (from .../libcairo2_1.12.14-4_mips.deb) ...
-Selecting previously unselected package libffi6:mips.
-Unpacking libffi6:mips (from .../libffi6_3.0.13-4_mips.deb) ...
+Unpacking libcairo2:mips (from .../libcairo2_1.12.14-5_mips.deb) ...
Selecting previously unselected package libglib2.0-0:mips.
-Unpacking libglib2.0-0:mips (from .../libglib2.0-0_2.36.1-2build1_mips.deb) ...
+Unpacking libglib2.0-0:mips (from .../libglib2.0-0_2.36.3-3_mips.deb) ...
Selecting previously unselected package libcroco3:mips.
Unpacking libcroco3:mips (from .../libcroco3_0.6.8-2_mips.deb) ...
Selecting previously unselected package libdatrie1:mips.
Unpacking libdatrie1:mips (from .../libdatrie1_0.2.6-2_mips.deb) ...
-Selecting previously unselected package libunistring0:mips.
-Unpacking libunistring0:mips (from .../libunistring0_0.9.3-5_mips.deb) ...
-Selecting previously unselected package libgettextpo0:mips.
-Unpacking libgettextpo0:mips (from .../libgettextpo0_0.18.1.1-10_mips.deb) ...
Selecting previously unselected package libgfortran3:mips.
-Unpacking libgfortran3:mips (from .../libgfortran3_4.8.0-7_mips.deb) ...
+Unpacking libgfortran3:mips (from .../libgfortran3_4.8.1-5_mips.deb) ...
+Selecting previously unselected package libgraphite2-3:mips.
+Unpacking libgraphite2-3:mips (from .../libgraphite2-3_1.2.3-1_mips.deb) ...
+Selecting previously unselected package libharfbuzz0a:mips.
+Unpacking libharfbuzz0a:mips (from .../libharfbuzz0a_0.9.19-1_mips.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:mips.
@@ -360,12 +408,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:mips.
Unpacking libthai0:mips (from .../libthai0_0.1.19-2_mips.deb) ...
-Selecting previously unselected package libxft2:mips.
-Unpacking libxft2:mips (from .../libxft2_2.3.1-1_mips.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_mips.deb) ...
-Selecting previously unselected package libpango1.0-0:mips.
-Unpacking libpango1.0-0:mips (from .../libpango1.0-0_1.30.0-1_mips.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_mips.deb) ...
+Selecting previously unselected package libpango-1.0-0:mips.
+Unpacking libpango-1.0-0:mips (from .../libpango-1.0-0_1.32.5-5+b1_mips.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:mips.
+Unpacking libpangoft2-1.0-0:mips (from .../libpangoft2-1.0-0_1.32.5-5+b1_mips.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:mips.
+Unpacking libpangocairo-1.0-0:mips (from .../libpangocairo-1.0-0_1.32.5-5+b1_mips.deb) ...
Selecting previously unselected package libpaper1:mips.
Unpacking libpaper1:mips (from .../libpaper1_1.1.24+nmu2_mips.deb) ...
Selecting previously unselected package libpcrecpp0:mips.
@@ -375,35 +425,35 @@ Unpacking libsm6:mips (from .../libsm6_2%3a1.2.1-2_mips.deb) ...
Selecting previously unselected package libjbig0:mips.
Unpacking libjbig0:mips (from .../libjbig0_2.0-2_mips.deb) ...
Selecting previously unselected package libtiff5:mips.
-Unpacking libtiff5:mips (from .../libtiff5_4.0.2-6_mips.deb) ...
+Unpacking libtiff5:mips (from .../libtiff5_4.0.3-1_mips.deb) ...
+Selecting previously unselected package libunistring0:mips.
+Unpacking libunistring0:mips (from .../libunistring0_0.9.3-5_mips.deb) ...
+Selecting previously unselected package libxft2:mips.
+Unpacking libxft2:mips (from .../libxft2_2.3.1-1_mips.deb) ...
Selecting previously unselected package libxss1:mips.
Unpacking libxss1:mips (from .../libxss1_1%3a1.2.2-1_mips.deb) ...
Selecting previously unselected package libxt6:mips.
-Unpacking libxt6:mips (from .../libxt6_1%3a1.1.3-1_mips.deb) ...
+Unpacking libxt6:mips (from .../libxt6_1%3a1.1.3-1+deb7u1_mips.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_mips.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_mips.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_mips.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_mips.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_mips.deb) ...
-Selecting previously unselected package libasprintf-dev:mips.
-Unpacking libasprintf-dev:mips (from .../libasprintf-dev_0.18.1.1-10_mips.deb) ...
-Selecting previously unselected package libgettextpo-dev:mips.
-Unpacking libgettextpo-dev:mips (from .../libgettextpo-dev_0.18.1.1-10_mips.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_mips.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_mips.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
-Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_mips.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Selecting previously unselected package libgfortran-4.8-dev:mips.
+Unpacking libgfortran-4.8-dev:mips (from .../libgfortran-4.8-dev_4.8.1-5_mips.deb) ...
+Selecting previously unselected package gfortran-4.8.
+Unpacking gfortran-4.8 (from .../gfortran-4.8_4.8.1-5_mips.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_mips.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.8.1-2_mips.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_mips.deb) ...
Selecting previously unselected package libblas-dev.
@@ -417,9 +467,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_mips.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_mips.deb) ...
Selecting previously unselected package libtinfo-dev:mips.
-Unpacking libtinfo-dev:mips (from .../libtinfo-dev_5.9+20130504-1_mips.deb) ...
+Unpacking libtinfo-dev:mips (from .../libtinfo-dev_5.9+20130608-1_mips.deb) ...
Selecting previously unselected package libncurses5-dev:mips.
-Unpacking libncurses5-dev:mips (from .../libncurses5-dev_5.9+20130504-1_mips.deb) ...
+Unpacking libncurses5-dev:mips (from .../libncurses5-dev_5.9+20130608-1_mips.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_mips.deb) ...
Selecting previously unselected package libpcre3-dev:mips.
@@ -439,82 +489,102 @@ Unpacking unzip (from .../archives/unzip_6.0-9_mips.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_mips.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_mips.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_mips.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_mips.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1-1_mips.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_mips.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1~20130512-1_all.deb) ...
-Setting up libpipeline1:mips (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libpipeline1:mips (1.2.4-1) ...
+Setting up libudev0:mips (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
-Setting up man-db (2.6.3-6) ...
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:mips (0.18.1.1-10) ...
-Setting up libmagic1:mips (1:5.14-1) ...
-Setting up libxml2:mips (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:mips (2.1.0-3) ...
+Setting up libasprintf0c2:mips (0.18.3-1) ...
+Setting up libmagic1:mips (1:5.14-2) ...
+Setting up libxml2:mips (2.9.1+dfsg1-2) ...
+Setting up libdrm2:mips (2.4.45-3) ...
+Setting up libglapi-mesa:mips (9.1.4-1) ...
+Setting up libxau6:mips (1:1.0.8-1) ...
+Setting up libxdmcp6:mips (1:1.1.1-1) ...
+Setting up libxcb1:mips (1.9.1-3) ...
+Setting up libxcb-dri2-0:mips (1.9.1-3) ...
+Setting up libgbm1:mips (9.1.4-1) ...
+Setting up libffi6:mips (3.0.13-4) ...
+Setting up libwayland-client0:mips (1.1.0-2) ...
+Setting up libwayland-server0:mips (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:mips (2:1.6.0-1) ...
+Setting up libx11-xcb1:mips (2:1.6.0-1) ...
+Setting up libxcb-render0:mips (1.9.1-3) ...
+Setting up libxcb-shape0:mips (1.9.1-3) ...
+Setting up libxcb-xfixes0:mips (1.9.1-3) ...
+Setting up libegl1-mesa:mips (9.1.4-1) ...
+Setting up libexpat1:mips (2.1.0-4) ...
Setting up libfreetype6:mips (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:mips (2.9.0-7.1) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:mips (2.10.2-2) ...
+Setting up libxcb-glx0:mips (1.9.1-3) ...
+Setting up libxfixes3:mips (1:5.0.1-1) ...
+Setting up libxdamage1:mips (1:1.1.4-1) ...
+Setting up libxext6:mips (2:1.3.2-1) ...
+Setting up libxxf86vm1:mips (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:mips (9.1.4-1) ...
Setting up libpixman-1-0:mips (0.26.0-4) ...
Setting up libpng12-0:mips (1.2.49-4) ...
-Setting up libxau6:mips (1:1.0.7-1) ...
-Setting up libxdmcp6:mips (1:1.1.1-1) ...
-Setting up libxcb1:mips (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:mips (2:1.5.0-1) ...
-Setting up libxcb-render0:mips (1.8.1-2) ...
-Setting up libxcb-shm0:mips (1.8.1-2) ...
-Setting up libxext6:mips (2:1.3.1-2) ...
-Setting up libxrender1:mips (1:0.9.7-1) ...
-Setting up libcairo2:mips (1.12.14-4) ...
-Setting up libffi6:mips (3.0.13-4) ...
-Setting up libglib2.0-0:mips (2.36.1-2build1) ...
+Setting up libxcb-shm0:mips (1.9.1-3) ...
+Setting up libxrender1:mips (1:0.9.8-1) ...
+Setting up libcairo2:mips (1.12.14-5) ...
+Setting up libglib2.0-0:mips (2.36.3-3) ...
No schema files found: doing nothing.
Setting up libcroco3:mips (0.6.8-2) ...
Setting up libdatrie1:mips (0.2.6-2) ...
-Setting up libunistring0:mips (0.9.3-5) ...
-Setting up libgettextpo0:mips (0.18.1.1-10) ...
-Setting up libgfortran3:mips (4.8.0-7) ...
+Setting up libgfortran3:mips (4.8.1-5) ...
+Setting up libgraphite2-3:mips (1.2.3-1) ...
+Setting up libharfbuzz0a:mips (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
+update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6:mips (2:1.0.8-2) ...
Setting up libjpeg8:mips (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:mips (0.1.19-2) ...
-Setting up libxft2:mips (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:mips (1.30.0-1) ...
+Setting up libpango-1.0-0:mips (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:mips (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:mips (1.32.5-5+b1) ...
Setting up libpaper1:mips (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:mips (1:8.31-2) ...
Setting up libsm6:mips (2:1.2.1-2) ...
Setting up libjbig0:mips (2.0-2) ...
-Setting up libtiff5:mips (4.0.2-6) ...
+Setting up libtiff5:mips (4.0.3-1) ...
+Setting up libunistring0:mips (0.9.3-5) ...
+Setting up libxft2:mips (2.3.1-1) ...
Setting up libxss1:mips (1:1.2.2-1) ...
-Setting up libxt6:mips (1:1.1.3-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libasprintf-dev:mips (0.18.1.1-10) ...
-Setting up libgettextpo-dev:mips (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:mips (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up libgfortran-4.8-dev:mips (4.8.1-5) ...
+Setting up gfortran-4.8 (4.8.1-5) ...
+Setting up gfortran (4:4.8.1-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -526,8 +596,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:mips (5.9+20130504-1) ...
-Setting up libncurses5-dev:mips (5.9+20130504-1) ...
+Setting up libtinfo-dev:mips (5.9+20130608-1) ...
+Setting up libncurses5-dev:mips (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:mips (1:8.31-2) ...
Setting up zlib1g-dev:mips (1:1.2.8.dfsg-1) ...
@@ -537,25 +607,24 @@ Setting up libreadline-dev:mips (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1~20130512-1) ...
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
Processing triggers for libc-bin ...
-ldconfig deferred processing now taking place
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
-Checking correctness of dependencies...
-Kernel: Linux 3.2.0-0.bpo.4-octeon mips (mips64)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6-dev_2.17-2 libstdc++6_4.8.0-7 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.2.41-2
-Package versions: apt_0.9.8.1 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.4 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.20-3 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.19-2 file_1:5.14-1 findutils_4.4.2-5 fontconf [...]
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: Linux 3.2.0-4-octeon mips (mips64)
+Toolchain package versions: binutils_2.23.52.20130722-1 dpkg-dev_1.16.10 g++-4.8_4.8.1-5 gcc-4.8_4.8.1-5 libc6-dev_2.17-7 libstdc++-4.8-dev_4.8.1-5 libstdc++6_4.8.1-5 linux-libc-dev_3.10.1-1
+Package versions: apt_0.9.9.2 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130722-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.21-1 cpp_4:4.8.1-2 cpp-4.8_4.8.1-5 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.19-2 file_1:5.14-2 findutils_4.4. [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -565,28 +634,46 @@ Package versions: apt_0.9.8.1 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd2/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+DEB_BUILD_OPTIONS=parallel=8
+HOME=/sbuild-nonexistent
+LOGNAME=buildd2
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-mips-sbuild
+SCHROOT_CHROOT_NAME=sid-mips-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-mips-sbuild-868f4850-163b-4ff8-adce-1a4f0eccc85e
+SCHROOT_UID=3126
+SCHROOT_USER=buildd2
+SHELL=/bin/sh
+USER=buildd2
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture mips
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -602,7 +689,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -621,26 +708,28 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1~20130512-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g0 -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
+ double abstol = -1e500; // infinity
+ ^
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -650,13 +739,13 @@ installing to /build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -664,7 +753,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -700,9 +789,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save
- gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save
- cd '/build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -732,79 +821,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_mips.deb'.
- dpkg-genchanges -B -mmips Build Daemon (lucatelli) <buildd_mips-lucatelli2 at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_mips.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_mips.deb'.
+ dpkg-genchanges -B -mmips Build Daemon (lucatelli) <buildd_mips-lucatelli2 at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_mips.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1439
+Build finished at 20130804-1023
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_mips.changes:
+────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_mips.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: mips
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
Maintainer: mips Build Daemon (lucatelli) <buildd_mips-lucatelli2 at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
- .
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- 9acc5a114a331ab99d1180b8edb854635a9030e0 1616028 r-bioc-limma_3.16.3~dfsg-1_mips.deb
+ c0719e96589f0ede5af6e6d9552928e94804e649 858520 r-bioc-limma_3.16.7~dfsg-1_mips.deb
Checksums-Sha256:
- 2adbf337c3eb2bce21d4f881f76546b0ca4255be61d4cf57722281fba7bcc237 1616028 r-bioc-limma_3.16.3~dfsg-1_mips.deb
+ 7569414dede6589e7db27fe905584f70e25dc71b8484ec3cc4f713bb18252704 858520 r-bioc-limma_3.16.7~dfsg-1_mips.deb
Files:
- 38f7a880c0d02bbc7ff593894ef483a5 1616028 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_mips.deb
+ 50e0c582dfce731a09fe9b0e6511ada7 858520 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_mips.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_mips.deb
+r-bioc-limma_3.16.7~dfsg-1_mips.deb
───────────────────────────────────
new debian package, version 2.0.
- size 1616028 bytes: control archive= 1677 bytes.
- 781 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ size 858520 bytes: control archive=1629 bytes.
+ 772 bytes, 16 lines control
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: mips
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1847
- Depends: libc6 (>= 2.2), r-base-core (>= 3.0.1~20130512-1)
+ Installed-Size: 1070
+ Depends: libc6 (>= 2.2), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -816,157 +902,166 @@ r-bioc-limma_3.16.3~dfsg-1_mips.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 14:38 ./
-drwxr-xr-x root/root 0 2013-05-17 14:38 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 14:36 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 14:36 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 14:38 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 14:37 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 2046 2013-05-17 14:36 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 963 2013-05-17 14:36 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2013-05-17 14:36 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 4106 2013-05-17 14:36 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 1056 2013-05-17 14:36 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 206552 2013-05-17 14:36 ./usr/lib/R/site-library/limma/R/limma.rdb
-drwxr-xr-x root/root 0 2013-05-17 14:37 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 6703 2013-05-17 14:37 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 3418 2013-05-17 14:37 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 2567 2013-05-17 14:37 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 1396 2013-05-17 14:36 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 494336 2013-05-17 14:37 ./usr/lib/R/site-library/limma/help/limma.rdb
-drwxr-xr-x root/root 0 2013-05-17 14:37 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2013-05-17 14:37 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 37337 2013-05-17 14:37 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 11214 2013-05-17 14:36 ./usr/lib/R/site-library/limma/NEWS.Rd
--rw-r--r-- root/root 990 2013-05-17 14:36 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2013-05-17 14:37 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 806089 2013-05-17 14:36 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 673 2013-05-17 14:36 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 45597 2013-05-17 14:36 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 102936 2013-05-17 14:36 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 1711 2013-05-17 14:36 ./usr/lib/R/site-library/limma/doc/limma.Rnw
-drwxr-xr-x root/root 0 2013-05-17 14:38 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10704 2013-05-17 14:38 ./usr/lib/R/site-library/limma/libs/limma.so
--rw-r--r-- root/root 10085 2013-05-17 14:37 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2013-05-17 14:37 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 3089 2013-05-17 14:37 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 219 2013-05-17 14:37 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 1068 2013-05-17 14:36 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 541 2013-05-17 14:37 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 5944 2013-05-17 14:37 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 6375 2013-05-17 14:37 ./usr/lib/R/site-library/limma/Meta/Rd.rds
-drwxr-xr-x root/root 0 2013-05-17 14:38 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-17 14:38 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-17 14:38 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
-drwxr-xr-x root/root 0 2013-05-17 14:38 ./usr/share/doc/r-bioc-limma/tests/
--rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+drwxr-xr-x root/root 0 2013-08-04 10:22 ./
+drwxr-xr-x root/root 0 2013-08-04 10:22 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 10:18 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 10:18 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 10:22 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 10:21 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 990 2013-08-04 10:18 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2013-08-04 10:21 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 1072 2013-08-04 10:18 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 3098 2013-08-04 10:21 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 219 2013-08-04 10:21 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 6386 2013-08-04 10:21 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5952 2013-08-04 10:21 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 542 2013-08-04 10:21 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+drwxr-xr-x root/root 0 2013-08-04 10:20 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 492459 2013-08-04 10:20 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 6742 2013-08-04 10:20 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 3429 2013-08-04 10:20 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 2577 2013-08-04 10:20 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 1392 2013-08-04 10:19 ./usr/lib/R/site-library/limma/help/paths.rds
+drwxr-xr-x root/root 0 2013-08-04 10:22 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 20708 2013-08-04 10:22 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2013-08-04 10:20 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2013-08-04 10:20 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 37564 2013-08-04 10:20 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 10085 2013-08-04 10:21 ./usr/lib/R/site-library/limma/INDEX
+-rw-r--r-- root/root 11214 2013-08-04 10:18 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 963 2013-08-04 10:18 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2013-08-04 10:21 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 104280 2013-08-04 10:18 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 1711 2013-08-04 10:18 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 673 2013-08-04 10:18 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 45597 2013-08-04 10:18 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 2095 2013-08-04 10:18 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2013-08-04 10:19 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 207873 2013-08-04 10:19 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 4128 2013-08-04 10:19 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 1056 2013-08-04 10:19 ./usr/lib/R/site-library/limma/R/limma
+drwxr-xr-x root/root 0 2013-08-04 10:22 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 10:22 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 10:22 ./usr/share/doc/r-bioc-limma/
+drwxr-xr-x root/root 0 2013-08-04 10:22 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mips-sbuild-63d3f535-faf2-4514-a9d5-9d0f0f970ba9/build/buildd2-r-bioc-limma_3.16.3~dfsg-1-mips-mFsuhn
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
-Can't open average time db /var/lib/sbuild/avg-build-times
-Can't open average space db /var/lib/sbuild/avg-build-space
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: mips
-Build-Space: 5884
-Build-Time: 255
+Build Architecture: mips
+Build-Space: 3556
+Build-Time: 342
Distribution: sid
-Install-Time: 218
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: mips
+Install-Time: 160
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: mips
Package: r-bioc-limma
-Package-Time: 638
-Source-Version: 3.16.3~dfsg-1
-Space: 5884
+Package-Time: 632
+Source-Version: 3.16.7~dfsg-1
+Space: 3556
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1439
-Build needed 00:10:38, 5884k disc space
+Finished at 20130804-1023
+Build needed 00:10:32, 3556k disc space
Signature with key 'A2DB4074' requested:
+ signfile /home/buildd2/build/r-bioc-limma_3.16.7~dfsg-1_mips.changes A2DB4074
-From buildd at eysler.debian.org Fri May 17 18:31:24 2013
-Return-path: <buildd at eysler.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+Successfully signed changes file
+From buildd at rem.debian.org Sun Aug 04 10:16:49 2013
+Return-path: <buildd at rem.debian.org>
+Received: from mailly.debian.org ([2001:41b8:202:deb:6564:a62:52c3:4b72])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
- by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
- id 1UdPR5-0005DQ-Lu
- for logs at buildd.debian.org; Fri, 17 May 2013 18:31:24 +0000
-Received: from eysler.debian.org ([2001:858:2:2:1a1a:0:563b:7698])
+ CN=mailly.debian.org, EMAIL=hostmaster at mailly.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
+ (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
+ id 1V5vMn-0006I9-Oh
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:16:49 +0000
+Received: from rem.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d06])
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- CN=eysler.debian.org, EMAIL=hostmaster at eysler.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
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-Received: from buildd by eysler.debian.org with local (Exim 4.72)
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- for logs at buildd.debian.org; Fri, 17 May 2013 18:31:21 +0000
-Date: Fri, 17 May 2013 18:31:21 +0000
-Message-Id: <E1UdPR3-0007Hr-Oy at eysler.debian.org>
-From: buildd on eysler <buildd at eysler.debian.org>
+ CN=rem.debian.org, EMAIL=hostmaster at rem.debian.org (verified)
+ by mailly.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
+ (Exim 4.80) (envelope-from <buildd at rem.debian.org>)
+ id 1V5vMm-000075-RH
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:16:48 +0000
+Received: from buildd by rem.debian.org with local (Exim 4.80)
+ (envelope-from <buildd at rem.debian.org>) id 1V5vLk-0003jv-8h
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:15:44 +0000
+Content-Transfer-Encoding: binary
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 10:15:43 +0000
+From: buildd on rem <buildd at rem.debian.org>
To: logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on mipsel
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on mipsel
(dist=sid)
-Content-Type: text/plain; charset=UTF-8
-Content-Transfer-Encoding: 8bit
+Key-Id: B1DFE6AC
+Message-Id: <E1V5vLk-0003jv-8h at rem.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on eysler.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on rem.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (mipsel) 17 May 2013 18:21 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (mipsel) 04 Aug 2013 10:06 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: mipsel
-Get:1 http://ftp.at.debian.org unstable Release.gpg [1571 B]
-Get:2 http://ftp.at.debian.org unstable Release [203 kB]
-Get:3 http://incoming.debian.org unstable Release.gpg [1571 B]
-Get:4 http://ftp.at.debian.org unstable/main Sources [6727 kB]
-Get:5 http://incoming.debian.org buildd-unstable Release.gpg [1571 B]
-Get:6 http://incoming.debian.org unstable Release [203 kB]
-Get:7 http://incoming.debian.org buildd-unstable Release [109 kB]
-Get:8 http://incoming.debian.org unstable/main Sources [6727 kB]
-Get:9 http://ftp.at.debian.org unstable/contrib Sources [53.7 kB]
-Get:10 http://ftp.at.debian.org unstable/non-free Sources [103 kB]
-Get:11 http://ftp.at.debian.org unstable/main mipsel Packages [6199 kB]
-Get:12 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:13 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:14 http://incoming.debian.org unstable/main mipsel Packages [6199 kB]
-Get:15 http://incoming.debian.org unstable/contrib mipsel Packages [37.4 kB]
-Get:16 http://incoming.debian.org buildd-unstable/main Sources [97.6 kB]
-Get:17 http://ftp.at.debian.org unstable/contrib mipsel Packages [37.4 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib Sources [14 B]
-Get:19 http://incoming.debian.org buildd-unstable/non-free Sources [2211 B]
-Get:20 http://incoming.debian.org buildd-unstable/main mipsel Packages [82.9 kB]
-Get:21 http://incoming.debian.org buildd-unstable/contrib mipsel Packages [14 B]
-Fetched 26.9 MB in 1min 43s (260 kB/s)
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: mipsel
+Host Architecture: mipsel
+Build Architecture: mipsel
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-oP1_ii/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-oP1_ii' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-mipsel-sbuild-57236218-19ca-49c8-b8dc-fb48470ccd04' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://ftp.de.debian.org unstable InRelease [204 kB]
+Get:2 http://incoming.debian.org unstable InRelease [204 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [6890 kB]
+Get:4 http://incoming.debian.org buildd-unstable InRelease [111 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:6 http://ftp.de.debian.org unstable/contrib Sources [55.4 kB]
+Get:7 http://ftp.de.debian.org unstable/non-free Sources [105 kB]
+Get:8 http://ftp.de.debian.org unstable/main mipsel Packages [6273 kB]
+Get:9 http://ftp.de.debian.org unstable/contrib mipsel Packages [37.9 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:12 http://incoming.debian.org unstable/main mipsel Packages [6273 kB]
+Get:13 http://incoming.debian.org unstable/contrib mipsel Packages [37.9 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [101 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2795 B]
+Get:17 http://incoming.debian.org buildd-unstable/main mipsel Packages [69.1 kB]
+Get:18 http://incoming.debian.org buildd-unstable/contrib mipsel Packages [14 B]
+Fetched 27.4 MB in 1min 11s (384 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -986,310 +1081,359 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://ftp.at.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://ftp.at.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://ftp.at.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 0s (2213 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (234 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-keyjJb/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: already installed (1.18.4-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- groff-base libpipeline1 man-db
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded.
-Removing negative dependencies:
+The following package was automatically installed and is no longer required:
+ gcc-4.6-base
+Use 'apt-get autoremove' to remove it.
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 37 not upgraded.
+Need to get 0 B/710 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 10931 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-rSGnX6/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- groff-base libpipeline1 man-db
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.1)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-0.1)
-bsdutils: already installed (1:2.20.1-5.3)
-coreutils: already installed (8.20-3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.13-38)
-login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.3)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-20)
-sed: already installed (4.2.1-10)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-0.1)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (2.13-38)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130516
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
+The following package was automatically installed and is no longer required:
+ gcc-4.6-base
+Use 'apt-get autoremove' to remove it.
The following extra packages will be installed:
- cpp-4.6 file fontconfig fontconfig-config fonts-dejavu-core g++-4.6 gcc-4.6
- gcc-4.6-base gcc-4.8-base gettext gettext-base gfortran gfortran-4.6
- html2text intltool-debian libasprintf-dev libasprintf0c2 libblas-dev
- libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi6
- libfontconfig1 libfreetype6 libgettextpo-dev libgettextpo0 libgfortran3
- libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3
- libmagic1 libmpc3 libncurses5 libncurses5-dev libpango1.0-0 libpaper-utils
- libpaper1 libpcre3-dev libpcrecpp0 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libstdc++6-4.6-dev libthai-data
- libthai0 libtiff5 libtinfo-dev libtinfo5 libunistring0 libx11-6 libx11-data
- libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
- libxml2 libxrender1 libxss1 libxt6 ncurses-bin po-debconf r-base-core tcl8.5
- tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g zlib1g-dev
+ bsdmainutils cdbs cpp-4.8 debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core g++-4.8 gcc-4.8 gcc-4.8-base gettext gettext-base gfortran
+ gfortran-4.8 groff-base intltool-debian libasprintf0c2 libatomic1
+ libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libdrm2
+ libegl1-mesa libexpat1 libffi6 libfontconfig1 libfreetype6 libgbm1
+ libgcc-4.8-dev libgcc1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0a libice6
+ libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1
+ libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
+ libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6
+ libstdc++-4.8-dev libstdc++6 libthai-data libthai0 libtiff5 libtinfo-dev
+ libudev0 libunistring0 libwayland-client0 libwayland-server0 libx11-6
+ libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0 libxcb-render0
+ libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6
+ libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6 libxxf86vm1
+ man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- devscripts gcc-4.6-locales dh-make g++-4.6-multilib gcc-4.6-doc
- libstdc++6-4.6-dbg gcc-4.6-multilib libmudflap0-4.6-dev libgcc1-dbg
- libgomp1-dbg libquadmath-dbg libmudflap0-dbg libcloog-ppl1 libcloog-ppl0
- libppl-c4 libppl12 libppl9 gettext-doc gfortran-multilib gfortran-doc
- gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg ncurses-doc
- ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp libstdc++6-4.6-doc libmail-box-perl ess r-doc-info
- r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ wamerican wordlist whois vacation devscripts gcc-4.8-locales dh-make
+ g++-4.8-multilib gcc-4.8-doc libstdc++6-4.8-dbg gcc-4.8-multilib
+ libmudflap0-4.8-dev libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg
+ libasan0-dbg libtsan0-dbg libbacktrace1-dbg libquadmath-dbg libmudflap0-dbg
+ gettext-doc gfortran-multilib gfortran-doc gfortran-4.8-multilib
+ gfortran-4.8-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
+ ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
+ ttf-arphic-bkai00mp libstdc++-4.8-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- libgpm2 xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- cdbs debhelper file fontconfig fontconfig-config fonts-dejavu-core
- gcc-4.8-base gettext gettext-base gfortran gfortran-4.6 html2text
- intltool-debian libasprintf-dev libasprintf0c2 libblas-dev libblas3
- libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1
- libfreetype6 libgettextpo-dev libgettextpo0 libgfortran3 libglib2.0-0
- libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1
- libmpc3 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3-dev
- libpcrecpp0 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff5 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6
- po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip
- x11-common xdg-utils zip zlib1g-dev
+ bsdmainutils cdbs debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0
+ libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
+ libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
+ libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
+ libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
+ libtiff5 libtinfo-dev libudev0 libunistring0 libwayland-client0
+ libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0
+ libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1
+ libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1
+ libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libncurses5 libstdc++6-4.6-dev
- libtinfo5 ncurses-bin zlib1g
-9 upgraded, 79 newly installed, 0 to remove and 39 not upgraded.
-Need to get 69.6 MB of archives.
-After this operation, 114 MB of additional disk space will be used.
-Get:1 http://ftp.at.debian.org/debian/ unstable/main libtinfo5 mipsel 5.9+20130504-1 [287 kB]
-Get:2 http://ftp.at.debian.org/debian/ unstable/main libncurses5 mipsel 5.9+20130504-1 [99.9 kB]
-Get:3 http://ftp.at.debian.org/debian/ unstable/main ncurses-bin mipsel 5.9+20130504-1 [359 kB]
-Get:4 http://ftp.at.debian.org/debian/ unstable/main zlib1g mipsel 1:1.2.8.dfsg-1 [89.3 kB]
-Get:5 http://ftp.at.debian.org/debian/ unstable/main libasprintf0c2 mipsel 0.18.1.1-10 [27.1 kB]
-Get:6 http://ftp.at.debian.org/debian/ unstable/main libmagic1 mipsel 1:5.14-1 [217 kB]
-Get:7 http://ftp.at.debian.org/debian/ unstable/main libxml2 mipsel 2.8.0+dfsg1-7+nmu1 [868 kB]
-Get:8 http://ftp.at.debian.org/debian/ unstable/main libexpat1 mipsel 2.1.0-3 [144 kB]
-Get:9 http://ftp.at.debian.org/debian/ unstable/main libfreetype6 mipsel 2.4.9-1.1 [434 kB]
-Get:10 http://ftp.at.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:11 http://ftp.at.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:12 http://ftp.at.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:13 http://ftp.at.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:14 http://ftp.at.debian.org/debian/ unstable/main libfontconfig1 mipsel 2.9.0-7.1 [301 kB]
-Get:15 http://ftp.at.debian.org/debian/ unstable/main libpixman-1-0 mipsel 0.26.0-4 [383 kB]
-Get:16 http://ftp.at.debian.org/debian/ unstable/main libpng12-0 mipsel 1.2.49-4 [185 kB]
-Get:17 http://ftp.at.debian.org/debian/ unstable/main libxau6 mipsel 1:1.0.7-1 [18.2 kB]
-Get:18 http://ftp.at.debian.org/debian/ unstable/main libxdmcp6 mipsel 1:1.1.1-1 [26.1 kB]
-Get:19 http://ftp.at.debian.org/debian/ unstable/main libxcb1 mipsel 1.8.1-2 [41.2 kB]
-Get:20 http://ftp.at.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:21 http://ftp.at.debian.org/debian/ unstable/main libx11-6 mipsel 2:1.5.0-1 [868 kB]
-Get:22 http://ftp.at.debian.org/debian/ unstable/main libxcb-render0 mipsel 1.8.1-2 [16.3 kB]
-Get:23 http://ftp.at.debian.org/debian/ unstable/main libxcb-shm0 mipsel 1.8.1-2 [10.2 kB]
-Get:24 http://ftp.at.debian.org/debian/ unstable/main libxext6 mipsel 2:1.3.1-2 [51.3 kB]
-Get:25 http://ftp.at.debian.org/debian/ unstable/main libxrender1 mipsel 1:0.9.7-1 [30.6 kB]
-Get:26 http://ftp.at.debian.org/debian/ unstable/main libcairo2 mipsel 1.12.14-4 [1015 kB]
-Get:27 http://ftp.at.debian.org/debian/ unstable/main libffi6 mipsel 3.0.13-4 [19.9 kB]
-Get:28 http://ftp.at.debian.org/debian/ unstable/main libglib2.0-0 mipsel 2.36.1-2build1 [1906 kB]
-Get:29 http://ftp.at.debian.org/debian/ unstable/main libcroco3 mipsel 0.6.8-2 [120 kB]
-Get:30 http://ftp.at.debian.org/debian/ unstable/main libdatrie1 mipsel 0.2.6-2 [29.2 kB]
-Get:31 http://ftp.at.debian.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
-Get:32 http://ftp.at.debian.org/debian/ unstable/main libgettextpo0 mipsel 0.18.1.1-10 [140 kB]
-Get:33 http://ftp.at.debian.org/debian/ unstable/main gcc-4.8-base mipsel 4.8.0-7 [148 kB]
-Get:34 http://ftp.at.debian.org/debian/ unstable/main libgfortran3 mipsel 4.8.0-7 [237 kB]
-Get:35 http://ftp.at.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:36 http://ftp.at.debian.org/debian/ unstable/main libice6 mipsel 2:1.0.8-2 [56.7 kB]
-Get:37 http://ftp.at.debian.org/debian/ unstable/main libjpeg8 mipsel 8d-1 [145 kB]
-Get:38 http://ftp.at.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:39 http://ftp.at.debian.org/debian/ unstable/main libthai0 mipsel 0.1.19-2 [41.6 kB]
-Get:40 http://ftp.at.debian.org/debian/ unstable/main libxft2 mipsel 2.3.1-1 [59.8 kB]
-Get:41 http://ftp.at.debian.org/debian/ unstable/main fontconfig mipsel 2.9.0-7.1 [348 kB]
-Get:42 http://ftp.at.debian.org/debian/ unstable/main libpango1.0-0 mipsel 1.30.0-1 [439 kB]
-Get:43 http://ftp.at.debian.org/debian/ unstable/main libpaper1 mipsel 1.1.24+nmu2 [21.4 kB]
-Get:44 http://ftp.at.debian.org/debian/ unstable/main libpcrecpp0 mipsel 1:8.31-2 [127 kB]
-Get:45 http://ftp.at.debian.org/debian/ unstable/main libsm6 mipsel 2:1.2.1-2 [32.5 kB]
-Get:46 http://ftp.at.debian.org/debian/ unstable/main libjbig0 mipsel 2.0-2 [32.4 kB]
-Get:47 http://ftp.at.debian.org/debian/ unstable/main libtiff5 mipsel 4.0.2-6 [229 kB]
-Get:48 http://ftp.at.debian.org/debian/ unstable/main libxss1 mipsel 1:1.2.2-1 [17.3 kB]
-Get:49 http://ftp.at.debian.org/debian/ unstable/main libxt6 mipsel 1:1.1.3-1 [192 kB]
-Get:50 http://ftp.at.debian.org/debian/ unstable/main libmpc3 mipsel 1.0.1-1 [40.4 kB]
-Get:51 http://ftp.at.debian.org/debian/ unstable/main file mipsel 1:5.14-1 [53.9 kB]
-Get:52 http://ftp.at.debian.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-10 [148 kB]
-Get:53 http://ftp.at.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:54 http://ftp.at.debian.org/debian/ unstable/main libstdc++6-4.6-dev mipsel 4.6.4-2 [1698 kB]
-Get:55 http://ftp.at.debian.org/debian/ unstable/main g++-4.6 mipsel 4.6.4-2 [4089 kB]
-Get:56 http://ftp.at.debian.org/debian/ unstable/main gcc-4.6 mipsel 4.6.4-2 [3990 kB]
-Get:57 http://ftp.at.debian.org/debian/ unstable/main cpp-4.6 mipsel 4.6.4-2 [3713 kB]
-Get:58 http://ftp.at.debian.org/debian/ unstable/main gcc-4.6-base mipsel 4.6.4-2 [143 kB]
-Get:59 http://ftp.at.debian.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
-Get:60 http://ftp.at.debian.org/debian/ unstable/main libasprintf-dev mipsel 0.18.1.1-10 [26.9 kB]
-Get:61 http://ftp.at.debian.org/debian/ unstable/main libgettextpo-dev mipsel 0.18.1.1-10 [188 kB]
-Get:62 http://ftp.at.debian.org/debian/ unstable/main gettext mipsel 0.18.1.1-10 [1734 kB]
-Get:63 http://ftp.at.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:64 http://ftp.at.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:65 http://ftp.at.debian.org/debian/ unstable/main debhelper all 9.20130516 [708 kB]
-Get:66 http://ftp.at.debian.org/debian/ unstable/main gfortran-4.6 mipsel 4.6.4-2 [4314 kB]
-Get:67 http://ftp.at.debian.org/debian/ unstable/main gfortran mipsel 4:4.6.3-8 [1142 B]
-Get:68 http://ftp.at.debian.org/debian/ unstable/main libblas3 mipsel 1.2.20110419-5 [202 kB]
-Get:69 http://ftp.at.debian.org/debian/ unstable/main libblas-dev mipsel 1.2.20110419-5 [241 kB]
-Get:70 http://ftp.at.debian.org/debian/ unstable/main libbz2-dev mipsel 1.0.6-4 [37.3 kB]
-Get:71 http://ftp.at.debian.org/debian/ unstable/main libjpeg8-dev mipsel 8d-1 [257 kB]
-Get:72 http://ftp.at.debian.org/debian/ unstable/main liblapack3 mipsel 3.4.2+dfsg-1 [4388 kB]
-Get:73 http://ftp.at.debian.org/debian/ unstable/main liblapack-dev mipsel 3.4.2+dfsg-1 [5139 kB]
-Get:74 http://ftp.at.debian.org/debian/ unstable/main libtinfo-dev mipsel 5.9+20130504-1 [105 kB]
-Get:75 http://ftp.at.debian.org/debian/ unstable/main libncurses5-dev mipsel 5.9+20130504-1 [226 kB]
-Get:76 http://ftp.at.debian.org/debian/ unstable/main libpaper-utils mipsel 1.1.24+nmu2 [18.3 kB]
-Get:77 http://ftp.at.debian.org/debian/ unstable/main libpcre3-dev mipsel 1:8.31-2 [365 kB]
-Get:78 http://ftp.at.debian.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.8.dfsg-1 [216 kB]
-Get:79 http://ftp.at.debian.org/debian/ unstable/main libpng12-dev mipsel 1.2.49-4 [275 kB]
-Get:80 http://ftp.at.debian.org/debian/ unstable/main libreadline6-dev mipsel 6.2+dfsg-0.1 [199 kB]
-Get:81 http://ftp.at.debian.org/debian/ unstable/main libreadline-dev mipsel 6.2+dfsg-0.1 [896 B]
-Get:82 http://ftp.at.debian.org/debian/ unstable/main zip mipsel 3.0-7 [334 kB]
-Get:83 http://ftp.at.debian.org/debian/ unstable/main unzip mipsel 6.0-9 [189 kB]
-Get:84 http://ftp.at.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:85 http://ftp.at.debian.org/debian/ unstable/main tcl8.5 mipsel 8.5.11-2 [1612 kB]
-Get:86 http://ftp.at.debian.org/debian/ unstable/main tk8.5 mipsel 8.5.11-2 [1167 kB]
-Get:87 http://ftp.at.debian.org/debian/ unstable/main r-base-core mipsel 3.0.1~20130512-1 [21.0 MB]
-Get:88 http://ftp.at.debian.org/debian/ unstable/main r-base-dev all 3.0.1~20130512-1 [3910 B]
+ cpp-4.8 g++-4.8 gcc-4.8 gcc-4.8-base libatomic1 libgcc-4.8-dev libgcc1
+ libgomp1 libstdc++-4.8-dev libstdc++6
+10 upgraded, 99 newly installed, 0 to remove and 27 not upgraded.
+Need to get 85.1 MB/85.1 MB of archives.
+After this operation, 134 MB of additional disk space will be used.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main libgomp1 mipsel 4.8.1-8 [27.8 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main gcc-4.8-base mipsel 4.8.1-8 [150 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libstdc++6 mipsel 4.8.1-8 [309 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libatomic1 mipsel 4.8.1-8 [7356 B]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main cpp-4.8 mipsel 4.8.1-8 [5827 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libstdc++-4.8-dev mipsel 4.8.1-8 [1735 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main g++-4.8 mipsel 4.8.1-8 [9264 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main gcc-4.8 mipsel 4.8.1-8 [6382 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libgcc-4.8-dev mipsel 4.8.1-8 [215 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main libgcc1 mipsel 1:4.8.1-8 [68.7 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 mipsel 1.2.4-1 [38.6 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main libudev0 mipsel 175-7.2 [124 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main groff-base mipsel 1.22.2-3 [715 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils mipsel 9.0.5 [211 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main man-db mipsel 2.6.5-2 [951 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main libasprintf0c2 mipsel 0.18.3-1 [29.7 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main libmagic1 mipsel 1:5.14-2 [217 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main libxml2 mipsel 2.9.1+dfsg1-2 [883 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main libdrm2 mipsel 2.4.45-3 [465 kB]
+Get:20 http://ftp.de.debian.org/debian/ unstable/main libglapi-mesa mipsel 9.1.4-1 [63.2 kB]
+Get:21 http://ftp.de.debian.org/debian/ unstable/main libxau6 mipsel 1:1.0.8-1 [20.3 kB]
+Get:22 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 mipsel 1:1.1.1-1 [26.1 kB]
+Get:23 http://ftp.de.debian.org/debian/ unstable/main libxcb1 mipsel 1.9.1-3 [42.0 kB]
+Get:24 http://ftp.de.debian.org/debian/ unstable/main libxcb-dri2-0 mipsel 1.9.1-3 [12.2 kB]
+Get:25 http://ftp.de.debian.org/debian/ unstable/main libgbm1 mipsel 9.1.4-1 [343 kB]
+Get:26 http://ftp.de.debian.org/debian/ unstable/main libffi6 mipsel 3.0.13-4 [19.9 kB]
+Get:27 http://ftp.de.debian.org/debian/ unstable/main libwayland-client0 mipsel 1.1.0-2 [20.6 kB]
+Get:28 http://ftp.de.debian.org/debian/ unstable/main libwayland-server0 mipsel 1.1.0-2 [28.4 kB]
+Get:29 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:30 http://ftp.de.debian.org/debian/ unstable/main libx11-6 mipsel 2:1.6.0-1 [885 kB]
+Get:31 http://ftp.de.debian.org/debian/ unstable/main libx11-xcb1 mipsel 2:1.6.0-1 [153 kB]
+Get:32 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 mipsel 1.9.1-3 [16.8 kB]
+Get:33 http://ftp.de.debian.org/debian/ unstable/main libxcb-shape0 mipsel 1.9.1-3 [11.0 kB]
+Get:34 http://ftp.de.debian.org/debian/ unstable/main libxcb-xfixes0 mipsel 1.9.1-3 [13.6 kB]
+Get:35 http://ftp.de.debian.org/debian/ unstable/main libegl1-mesa mipsel 9.1.4-1 [74.6 kB]
+Get:36 http://ftp.de.debian.org/debian/ unstable/main libexpat1 mipsel 2.1.0-4 [141 kB]
+Get:37 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 mipsel 2.4.9-1.1 [434 kB]
+Get:38 http://ftp.de.debian.org/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:39 http://ftp.de.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:40 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:41 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:42 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 mipsel 2.10.2-2 [323 kB]
+Get:43 http://ftp.de.debian.org/debian/ unstable/main libxcb-glx0 mipsel 1.9.1-3 [25.3 kB]
+Get:44 http://ftp.de.debian.org/debian/ unstable/main libxfixes3 mipsel 1:5.0.1-1 [21.8 kB]
+Get:45 http://ftp.de.debian.org/debian/ unstable/main libxdamage1 mipsel 1:1.1.4-1 [15.0 kB]
+Get:46 http://ftp.de.debian.org/debian/ unstable/main libxext6 mipsel 2:1.3.2-1 [51.7 kB]
+Get:47 http://ftp.de.debian.org/debian/ unstable/main libxxf86vm1 mipsel 1:1.1.2-1+deb7u1 [18.7 kB]
+Get:48 http://ftp.de.debian.org/debian/ unstable/main libgl1-mesa-glx mipsel 9.1.4-1 [117 kB]
+Get:49 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 mipsel 0.30.0-3 [456 kB]
+Get:50 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 mipsel 1.2.49-4 [185 kB]
+Get:51 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 mipsel 1.9.1-3 [10.6 kB]
+Get:52 http://ftp.de.debian.org/debian/ unstable/main libxrender1 mipsel 1:0.9.8-1 [31.6 kB]
+Get:53 http://ftp.de.debian.org/debian/ unstable/main libcairo2 mipsel 1.12.14-5 [1052 kB]
+Get:54 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 mipsel 2.36.3-3 [1886 kB]
+Get:55 http://ftp.de.debian.org/debian/ unstable/main libcroco3 mipsel 0.6.8-2 [120 kB]
+Get:56 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 mipsel 0.2.6-2 [29.2 kB]
+Get:57 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 mipsel 4.8.1-8 [231 kB]
+Get:58 http://ftp.de.debian.org/debian/ unstable/main libgraphite2-3 mipsel 1.2.3-1 [61.1 kB]
+Get:59 http://ftp.de.debian.org/debian/ unstable/main libharfbuzz0a mipsel 0.9.19-1 [439 kB]
+Get:60 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:61 http://ftp.de.debian.org/debian/ unstable/main libice6 mipsel 2:1.0.8-2 [56.7 kB]
+Get:62 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 mipsel 8d-1 [145 kB]
+Get:63 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:64 http://ftp.de.debian.org/debian/ unstable/main libthai0 mipsel 0.1.19-2 [41.6 kB]
+Get:65 http://ftp.de.debian.org/debian/ unstable/main fontconfig mipsel 2.10.2-2 [374 kB]
+Get:66 http://ftp.de.debian.org/debian/ unstable/main libpango-1.0-0 mipsel 1.32.5-5+b1 [252 kB]
+Get:67 http://ftp.de.debian.org/debian/ unstable/main libpangoft2-1.0-0 mipsel 1.32.5-5+b1 [183 kB]
+Get:68 http://ftp.de.debian.org/debian/ unstable/main libpangocairo-1.0-0 mipsel 1.32.5-5+b1 [173 kB]
+Get:69 http://ftp.de.debian.org/debian/ unstable/main libpaper1 mipsel 1.1.24+nmu2 [21.4 kB]
+Get:70 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 mipsel 1:8.31-2 [127 kB]
+Get:71 http://ftp.de.debian.org/debian/ unstable/main libsm6 mipsel 2:1.2.1-2 [32.5 kB]
+Get:72 http://ftp.de.debian.org/debian/ unstable/main libjbig0 mipsel 2.0-2 [32.4 kB]
+Get:73 http://ftp.de.debian.org/debian/ unstable/main libtiff5 mipsel 4.0.3-1 [231 kB]
+Get:74 http://ftp.de.debian.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
+Get:75 http://ftp.de.debian.org/debian/ unstable/main libxft2 mipsel 2.3.1-1 [59.8 kB]
+Get:76 http://ftp.de.debian.org/debian/ unstable/main libxss1 mipsel 1:1.2.2-1 [17.3 kB]
+Get:77 http://ftp.de.debian.org/debian/ unstable/main libxt6 mipsel 1:1.1.3-1+deb7u1 [192 kB]
+Get:78 http://ftp.de.debian.org/debian/ unstable/main file mipsel 1:5.14-2 [53.9 kB]
+Get:79 http://ftp.de.debian.org/debian/ unstable/main gettext-base mipsel 0.18.3-1 [162 kB]
+Get:80 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:81 http://ftp.de.debian.org/debian/ unstable/main gettext mipsel 0.18.3-1 [1867 kB]
+Get:82 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:83 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:84 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:85 http://ftp.de.debian.org/debian/ unstable/main libgfortran-4.8-dev mipsel 4.8.1-8 [357 kB]
+Get:86 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.8 mipsel 4.8.1-8 [6190 kB]
+Get:87 http://ftp.de.debian.org/debian/ unstable/main gfortran mipsel 4:4.8.1-2 [1136 B]
+Get:88 http://ftp.de.debian.org/debian/ unstable/main libblas3 mipsel 1.2.20110419-5 [202 kB]
+Get:89 http://ftp.de.debian.org/debian/ unstable/main libblas-dev mipsel 1.2.20110419-5 [241 kB]
+Get:90 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev mipsel 1.0.6-4 [37.3 kB]
+Get:91 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev mipsel 8d-1 [257 kB]
+Get:92 http://ftp.de.debian.org/debian/ unstable/main liblapack3 mipsel 3.4.2+dfsg-1 [4388 kB]
+Get:93 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev mipsel 3.4.2+dfsg-1 [5139 kB]
+Get:94 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev mipsel 5.9+20130608-1 [105 kB]
+Get:95 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev mipsel 5.9+20130608-1 [226 kB]
+Get:96 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils mipsel 1.1.24+nmu2 [18.3 kB]
+Get:97 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev mipsel 1:8.31-2 [365 kB]
+Get:98 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.8.dfsg-1 [216 kB]
+Get:99 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev mipsel 1.2.49-4 [275 kB]
+Get:100 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev mipsel 6.2+dfsg-0.1 [199 kB]
+Get:101 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev mipsel 6.2+dfsg-0.1 [896 B]
+Get:102 http://ftp.de.debian.org/debian/ unstable/main zip mipsel 3.0-7 [334 kB]
+Get:103 http://ftp.de.debian.org/debian/ unstable/main unzip mipsel 6.0-9 [189 kB]
+Get:104 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:105 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 mipsel 8.5.14-2 [1628 kB]
+Get:106 http://ftp.de.debian.org/debian/ unstable/main tk8.5 mipsel 8.5.14-2 [1176 kB]
+Get:107 http://ftp.de.debian.org/debian/ unstable/main r-base-core mipsel 3.0.1-6 [20.9 MB]
+Get:108 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 69.6 MB in 33s (2063 kB/s)
-(Reading database ... 11331 files and directories currently installed.)
-Preparing to replace libtinfo5:mipsel 5.9-10 (using .../libtinfo5_5.9+20130504-1_mipsel.deb) ...
-Unpacking replacement libtinfo5:mipsel ...
-Setting up libtinfo5:mipsel (5.9+20130504-1) ...
-(Reading database ... 11331 files and directories currently installed.)
-Preparing to replace libncurses5:mipsel 5.9-10 (using .../libncurses5_5.9+20130504-1_mipsel.deb) ...
-Unpacking replacement libncurses5:mipsel ...
-Setting up libncurses5:mipsel (5.9+20130504-1) ...
-(Reading database ... 11331 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_mipsel.deb) ...
-Unpacking replacement ncurses-bin ...
-Processing triggers for man-db ...
-Setting up ncurses-bin (5.9+20130504-1) ...
-(Reading database ... 11329 files and directories currently installed.)
-Preparing to replace zlib1g:mipsel 1:1.2.7.dfsg-13 (using .../zlib1g_1%3a1.2.8.dfsg-1_mipsel.deb) ...
-Unpacking replacement zlib1g:mipsel ...
-Setting up zlib1g:mipsel (1:1.2.8.dfsg-1) ...
+Fetched 85.1 MB in 2min 24s (587 kB/s)
+(Reading database ... 10931 files and directories currently installed.)
+Preparing to replace libgomp1:mipsel 4.8.1-6 (using .../libgomp1_4.8.1-8_mipsel.deb) ...
+Unpacking replacement libgomp1:mipsel ...
+Preparing to replace gcc-4.8-base:mipsel 4.8.1-6 (using .../gcc-4.8-base_4.8.1-8_mipsel.deb) ...
+Unpacking replacement gcc-4.8-base:mipsel ...
+Setting up gcc-4.8-base:mipsel (4.8.1-8) ...
+(Reading database ... 10931 files and directories currently installed.)
+Preparing to replace libstdc++6:mipsel 4.8.1-6 (using .../libstdc++6_4.8.1-8_mipsel.deb) ...
+Unpacking replacement libstdc++6:mipsel ...
+Preparing to replace libgcc1:mipsel 1:4.8.1-6 (using .../libgcc1_1%3a4.8.1-8_mipsel.deb) ...
+Unpacking replacement libgcc1:mipsel ...
+Setting up libgcc1:mipsel (1:4.8.1-8) ...
+Setting up libstdc++6:mipsel (4.8.1-8) ...
+Processing triggers for libc-bin ...
+(Reading database ... 10931 files and directories currently installed.)
+Preparing to replace libatomic1:mipsel 4.8.1-6 (using .../libatomic1_4.8.1-8_mipsel.deb) ...
+Unpacking replacement libatomic1:mipsel ...
+Preparing to replace cpp-4.8 4.8.1-6 (using .../cpp-4.8_4.8.1-8_mipsel.deb) ...
+Unpacking replacement cpp-4.8 ...
+Preparing to replace libstdc++-4.8-dev:mipsel 4.8.1-6 (using .../libstdc++-4.8-dev_4.8.1-8_mipsel.deb) ...
+Unpacking replacement libstdc++-4.8-dev:mipsel ...
+Preparing to replace g++-4.8 4.8.1-6 (using .../g++-4.8_4.8.1-8_mipsel.deb) ...
+Unpacking replacement g++-4.8 ...
+Preparing to replace gcc-4.8 4.8.1-6 (using .../gcc-4.8_4.8.1-8_mipsel.deb) ...
+Unpacking replacement gcc-4.8 ...
+Preparing to replace libgcc-4.8-dev:mipsel 4.8.1-6 (using .../libgcc-4.8-dev_4.8.1-8_mipsel.deb) ...
+Unpacking replacement libgcc-4.8-dev:mipsel ...
+Selecting previously unselected package libpipeline1:mipsel.
+Unpacking libpipeline1:mipsel (from .../libpipeline1_1.2.4-1_mipsel.deb) ...
+Selecting previously unselected package libudev0:mipsel.
+Unpacking libudev0:mipsel (from .../libudev0_175-7.2_mipsel.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.22.2-3_mipsel.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_mipsel.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.5-2_mipsel.deb) ...
Selecting previously unselected package libasprintf0c2:mipsel.
-(Reading database ... 11329 files and directories currently installed.)
-Unpacking libasprintf0c2:mipsel (from .../libasprintf0c2_0.18.1.1-10_mipsel.deb) ...
+Unpacking libasprintf0c2:mipsel (from .../libasprintf0c2_0.18.3-1_mipsel.deb) ...
Selecting previously unselected package libmagic1:mipsel.
-Unpacking libmagic1:mipsel (from .../libmagic1_1%3a5.14-1_mipsel.deb) ...
+Unpacking libmagic1:mipsel (from .../libmagic1_1%3a5.14-2_mipsel.deb) ...
Selecting previously unselected package libxml2:mipsel.
-Unpacking libxml2:mipsel (from .../libxml2_2.8.0+dfsg1-7+nmu1_mipsel.deb) ...
+Unpacking libxml2:mipsel (from .../libxml2_2.9.1+dfsg1-2_mipsel.deb) ...
+Selecting previously unselected package libdrm2:mipsel.
+Unpacking libdrm2:mipsel (from .../libdrm2_2.4.45-3_mipsel.deb) ...
+Selecting previously unselected package libglapi-mesa:mipsel.
+Unpacking libglapi-mesa:mipsel (from .../libglapi-mesa_9.1.4-1_mipsel.deb) ...
+Selecting previously unselected package libxau6:mipsel.
+Unpacking libxau6:mipsel (from .../libxau6_1%3a1.0.8-1_mipsel.deb) ...
+Selecting previously unselected package libxdmcp6:mipsel.
+Unpacking libxdmcp6:mipsel (from .../libxdmcp6_1%3a1.1.1-1_mipsel.deb) ...
+Selecting previously unselected package libxcb1:mipsel.
+Unpacking libxcb1:mipsel (from .../libxcb1_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libxcb-dri2-0:mipsel.
+Unpacking libxcb-dri2-0:mipsel (from .../libxcb-dri2-0_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libgbm1:mipsel.
+Unpacking libgbm1:mipsel (from .../libgbm1_9.1.4-1_mipsel.deb) ...
+Selecting previously unselected package libffi6:mipsel.
+Unpacking libffi6:mipsel (from .../libffi6_3.0.13-4_mipsel.deb) ...
+Selecting previously unselected package libwayland-client0:mipsel.
+Unpacking libwayland-client0:mipsel (from .../libwayland-client0_1.1.0-2_mipsel.deb) ...
+Selecting previously unselected package libwayland-server0:mipsel.
+Unpacking libwayland-server0:mipsel (from .../libwayland-server0_1.1.0-2_mipsel.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:mipsel.
+Unpacking libx11-6:mipsel (from .../libx11-6_2%3a1.6.0-1_mipsel.deb) ...
+Selecting previously unselected package libx11-xcb1:mipsel.
+Unpacking libx11-xcb1:mipsel (from .../libx11-xcb1_2%3a1.6.0-1_mipsel.deb) ...
+Selecting previously unselected package libxcb-render0:mipsel.
+Unpacking libxcb-render0:mipsel (from .../libxcb-render0_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libxcb-shape0:mipsel.
+Unpacking libxcb-shape0:mipsel (from .../libxcb-shape0_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libxcb-xfixes0:mipsel.
+Unpacking libxcb-xfixes0:mipsel (from .../libxcb-xfixes0_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libegl1-mesa:mipsel.
+Unpacking libegl1-mesa:mipsel (from .../libegl1-mesa_9.1.4-1_mipsel.deb) ...
Selecting previously unselected package libexpat1:mipsel.
-Unpacking libexpat1:mipsel (from .../libexpat1_2.1.0-3_mipsel.deb) ...
+Unpacking libexpat1:mipsel (from .../libexpat1_2.1.0-4_mipsel.deb) ...
Selecting previously unselected package libfreetype6:mipsel.
Unpacking libfreetype6:mipsel (from .../libfreetype6_2.4.9-1.1_mipsel.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:mipsel.
-Unpacking libfontconfig1:mipsel (from .../libfontconfig1_2.9.0-7.1_mipsel.deb) ...
+Unpacking libfontconfig1:mipsel (from .../libfontconfig1_2.10.2-2_mipsel.deb) ...
+Selecting previously unselected package libxcb-glx0:mipsel.
+Unpacking libxcb-glx0:mipsel (from .../libxcb-glx0_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libxfixes3:mipsel.
+Unpacking libxfixes3:mipsel (from .../libxfixes3_1%3a5.0.1-1_mipsel.deb) ...
+Selecting previously unselected package libxdamage1:mipsel.
+Unpacking libxdamage1:mipsel (from .../libxdamage1_1%3a1.1.4-1_mipsel.deb) ...
+Selecting previously unselected package libxext6:mipsel.
+Unpacking libxext6:mipsel (from .../libxext6_2%3a1.3.2-1_mipsel.deb) ...
+Selecting previously unselected package libxxf86vm1:mipsel.
+Unpacking libxxf86vm1:mipsel (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_mipsel.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:mipsel.
+Unpacking libgl1-mesa-glx:mipsel (from .../libgl1-mesa-glx_9.1.4-1_mipsel.deb) ...
Selecting previously unselected package libpixman-1-0:mipsel.
-Unpacking libpixman-1-0:mipsel (from .../libpixman-1-0_0.26.0-4_mipsel.deb) ...
+Unpacking libpixman-1-0:mipsel (from .../libpixman-1-0_0.30.0-3_mipsel.deb) ...
Selecting previously unselected package libpng12-0:mipsel.
Unpacking libpng12-0:mipsel (from .../libpng12-0_1.2.49-4_mipsel.deb) ...
-Selecting previously unselected package libxau6:mipsel.
-Unpacking libxau6:mipsel (from .../libxau6_1%3a1.0.7-1_mipsel.deb) ...
-Selecting previously unselected package libxdmcp6:mipsel.
-Unpacking libxdmcp6:mipsel (from .../libxdmcp6_1%3a1.1.1-1_mipsel.deb) ...
-Selecting previously unselected package libxcb1:mipsel.
-Unpacking libxcb1:mipsel (from .../libxcb1_1.8.1-2_mipsel.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:mipsel.
-Unpacking libx11-6:mipsel (from .../libx11-6_2%3a1.5.0-1_mipsel.deb) ...
-Selecting previously unselected package libxcb-render0:mipsel.
-Unpacking libxcb-render0:mipsel (from .../libxcb-render0_1.8.1-2_mipsel.deb) ...
Selecting previously unselected package libxcb-shm0:mipsel.
-Unpacking libxcb-shm0:mipsel (from .../libxcb-shm0_1.8.1-2_mipsel.deb) ...
-Selecting previously unselected package libxext6:mipsel.
-Unpacking libxext6:mipsel (from .../libxext6_2%3a1.3.1-2_mipsel.deb) ...
+Unpacking libxcb-shm0:mipsel (from .../libxcb-shm0_1.9.1-3_mipsel.deb) ...
Selecting previously unselected package libxrender1:mipsel.
-Unpacking libxrender1:mipsel (from .../libxrender1_1%3a0.9.7-1_mipsel.deb) ...
+Unpacking libxrender1:mipsel (from .../libxrender1_1%3a0.9.8-1_mipsel.deb) ...
Selecting previously unselected package libcairo2:mipsel.
-Unpacking libcairo2:mipsel (from .../libcairo2_1.12.14-4_mipsel.deb) ...
-Selecting previously unselected package libffi6:mipsel.
-Unpacking libffi6:mipsel (from .../libffi6_3.0.13-4_mipsel.deb) ...
+Unpacking libcairo2:mipsel (from .../libcairo2_1.12.14-5_mipsel.deb) ...
Selecting previously unselected package libglib2.0-0:mipsel.
-Unpacking libglib2.0-0:mipsel (from .../libglib2.0-0_2.36.1-2build1_mipsel.deb) ...
+Unpacking libglib2.0-0:mipsel (from .../libglib2.0-0_2.36.3-3_mipsel.deb) ...
Selecting previously unselected package libcroco3:mipsel.
Unpacking libcroco3:mipsel (from .../libcroco3_0.6.8-2_mipsel.deb) ...
Selecting previously unselected package libdatrie1:mipsel.
Unpacking libdatrie1:mipsel (from .../libdatrie1_0.2.6-2_mipsel.deb) ...
-Selecting previously unselected package libunistring0:mipsel.
-Unpacking libunistring0:mipsel (from .../libunistring0_0.9.3-5_mipsel.deb) ...
-Selecting previously unselected package libgettextpo0:mipsel.
-Unpacking libgettextpo0:mipsel (from .../libgettextpo0_0.18.1.1-10_mipsel.deb) ...
-Selecting previously unselected package gcc-4.8-base:mipsel.
-Unpacking gcc-4.8-base:mipsel (from .../gcc-4.8-base_4.8.0-7_mipsel.deb) ...
Selecting previously unselected package libgfortran3:mipsel.
-Unpacking libgfortran3:mipsel (from .../libgfortran3_4.8.0-7_mipsel.deb) ...
+Unpacking libgfortran3:mipsel (from .../libgfortran3_4.8.1-8_mipsel.deb) ...
+Selecting previously unselected package libgraphite2-3:mipsel.
+Unpacking libgraphite2-3:mipsel (from .../libgraphite2-3_1.2.3-1_mipsel.deb) ...
+Selecting previously unselected package libharfbuzz0a:mipsel.
+Unpacking libharfbuzz0a:mipsel (from .../libharfbuzz0a_0.9.19-1_mipsel.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:mipsel.
@@ -1300,12 +1444,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:mipsel.
Unpacking libthai0:mipsel (from .../libthai0_0.1.19-2_mipsel.deb) ...
-Selecting previously unselected package libxft2:mipsel.
-Unpacking libxft2:mipsel (from .../libxft2_2.3.1-1_mipsel.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_mipsel.deb) ...
-Selecting previously unselected package libpango1.0-0:mipsel.
-Unpacking libpango1.0-0:mipsel (from .../libpango1.0-0_1.30.0-1_mipsel.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_mipsel.deb) ...
+Selecting previously unselected package libpango-1.0-0:mipsel.
+Unpacking libpango-1.0-0:mipsel (from .../libpango-1.0-0_1.32.5-5+b1_mipsel.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:mipsel.
+Unpacking libpangoft2-1.0-0:mipsel (from .../libpangoft2-1.0-0_1.32.5-5+b1_mipsel.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:mipsel.
+Unpacking libpangocairo-1.0-0:mipsel (from .../libpangocairo-1.0-0_1.32.5-5+b1_mipsel.deb) ...
Selecting previously unselected package libpaper1:mipsel.
Unpacking libpaper1:mipsel (from .../libpaper1_1.1.24+nmu2_mipsel.deb) ...
Selecting previously unselected package libpcrecpp0:mipsel.
@@ -1315,47 +1461,35 @@ Unpacking libsm6:mipsel (from .../libsm6_2%3a1.2.1-2_mipsel.deb) ...
Selecting previously unselected package libjbig0:mipsel.
Unpacking libjbig0:mipsel (from .../libjbig0_2.0-2_mipsel.deb) ...
Selecting previously unselected package libtiff5:mipsel.
-Unpacking libtiff5:mipsel (from .../libtiff5_4.0.2-6_mipsel.deb) ...
+Unpacking libtiff5:mipsel (from .../libtiff5_4.0.3-1_mipsel.deb) ...
+Selecting previously unselected package libunistring0:mipsel.
+Unpacking libunistring0:mipsel (from .../libunistring0_0.9.3-5_mipsel.deb) ...
+Selecting previously unselected package libxft2:mipsel.
+Unpacking libxft2:mipsel (from .../libxft2_2.3.1-1_mipsel.deb) ...
Selecting previously unselected package libxss1:mipsel.
Unpacking libxss1:mipsel (from .../libxss1_1%3a1.2.2-1_mipsel.deb) ...
Selecting previously unselected package libxt6:mipsel.
-Unpacking libxt6:mipsel (from .../libxt6_1%3a1.1.3-1_mipsel.deb) ...
-Selecting previously unselected package libmpc3:mipsel.
-Unpacking libmpc3:mipsel (from .../libmpc3_1.0.1-1_mipsel.deb) ...
+Unpacking libxt6:mipsel (from .../libxt6_1%3a1.1.3-1+deb7u1_mipsel.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_mipsel.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_mipsel.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_mipsel.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_mipsel.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Preparing to replace libstdc++6-4.6-dev 4.6.3-15 (using .../libstdc++6-4.6-dev_4.6.4-2_mipsel.deb) ...
-Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.3-15 (using .../g++-4.6_4.6.4-2_mipsel.deb) ...
-Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.3-15 (using .../gcc-4.6_4.6.4-2_mipsel.deb) ...
-Unpacking replacement gcc-4.6 ...
-Preparing to replace cpp-4.6 4.6.3-15 (using .../cpp-4.6_4.6.4-2_mipsel.deb) ...
-Unpacking replacement cpp-4.6 ...
-Preparing to replace gcc-4.6-base:mipsel 4.6.3-15 (using .../gcc-4.6-base_4.6.4-2_mipsel.deb) ...
-Unpacking replacement gcc-4.6-base:mipsel ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_mipsel.deb) ...
-Selecting previously unselected package libasprintf-dev:mipsel.
-Unpacking libasprintf-dev:mipsel (from .../libasprintf-dev_0.18.1.1-10_mipsel.deb) ...
-Selecting previously unselected package libgettextpo-dev:mipsel.
-Unpacking libgettextpo-dev:mipsel (from .../libgettextpo-dev_0.18.1.1-10_mipsel.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_mipsel.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_mipsel.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
-Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_mipsel.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Selecting previously unselected package libgfortran-4.8-dev:mipsel.
+Unpacking libgfortran-4.8-dev:mipsel (from .../libgfortran-4.8-dev_4.8.1-8_mipsel.deb) ...
+Selecting previously unselected package gfortran-4.8.
+Unpacking gfortran-4.8 (from .../gfortran-4.8_4.8.1-8_mipsel.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_mipsel.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.8.1-2_mipsel.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_mipsel.deb) ...
Selecting previously unselected package libblas-dev.
@@ -1369,9 +1503,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_mipsel.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_mipsel.deb) ...
Selecting previously unselected package libtinfo-dev:mipsel.
-Unpacking libtinfo-dev:mipsel (from .../libtinfo-dev_5.9+20130504-1_mipsel.deb) ...
+Unpacking libtinfo-dev:mipsel (from .../libtinfo-dev_5.9+20130608-1_mipsel.deb) ...
Selecting previously unselected package libncurses5-dev:mipsel.
-Unpacking libncurses5-dev:mipsel (from .../libncurses5-dev_5.9+20130504-1_mipsel.deb) ...
+Unpacking libncurses5-dev:mipsel (from .../libncurses5-dev_5.9+20130608-1_mipsel.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_mipsel.deb) ...
Selecting previously unselected package libpcre3-dev:mipsel.
@@ -1391,45 +1525,75 @@ Unpacking unzip (from .../unzip_6.0-9_mipsel.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_mipsel.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_mipsel.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_mipsel.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_mipsel.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1~20130512-1_mipsel.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_mipsel.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1~20130512-1_all.deb) ...
-Processing triggers for man-db ...
-Setting up libasprintf0c2:mipsel (0.18.1.1-10) ...
-Setting up libmagic1:mipsel (1:5.14-1) ...
-Setting up libxml2:mipsel (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:mipsel (2.1.0-3) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:mipsel (4.8.1-8) ...
+Setting up libatomic1:mipsel (4.8.1-8) ...
+Setting up cpp-4.8 (4.8.1-8) ...
+Setting up libgcc-4.8-dev:mipsel (4.8.1-8) ...
+Setting up libstdc++-4.8-dev:mipsel (4.8.1-8) ...
+Setting up gcc-4.8 (4.8.1-8) ...
+Setting up g++-4.8 (4.8.1-8) ...
+Setting up libpipeline1:mipsel (1.2.4-1) ...
+Setting up libudev0:mipsel (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
+Setting up bsdmainutils (9.0.5) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
+Setting up man-db (2.6.5-2) ...
+Not building database; man-db/auto-update is not 'true'.
+Setting up libasprintf0c2:mipsel (0.18.3-1) ...
+Setting up libmagic1:mipsel (1:5.14-2) ...
+Setting up libxml2:mipsel (2.9.1+dfsg1-2) ...
+Setting up libdrm2:mipsel (2.4.45-3) ...
+Setting up libglapi-mesa:mipsel (9.1.4-1) ...
+Setting up libxau6:mipsel (1:1.0.8-1) ...
+Setting up libxdmcp6:mipsel (1:1.1.1-1) ...
+Setting up libxcb1:mipsel (1.9.1-3) ...
+Setting up libxcb-dri2-0:mipsel (1.9.1-3) ...
+Setting up libgbm1:mipsel (9.1.4-1) ...
+Setting up libffi6:mipsel (3.0.13-4) ...
+Setting up libwayland-client0:mipsel (1.1.0-2) ...
+Setting up libwayland-server0:mipsel (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:mipsel (2:1.6.0-1) ...
+Setting up libx11-xcb1:mipsel (2:1.6.0-1) ...
+Setting up libxcb-render0:mipsel (1.9.1-3) ...
+Setting up libxcb-shape0:mipsel (1.9.1-3) ...
+Setting up libxcb-xfixes0:mipsel (1.9.1-3) ...
+Setting up libegl1-mesa:mipsel (9.1.4-1) ...
+Setting up libexpat1:mipsel (2.1.0-4) ...
Setting up libfreetype6:mipsel (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:mipsel (2.9.0-7.1) ...
-Setting up libpixman-1-0:mipsel (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:mipsel (2.10.2-2) ...
+Setting up libxcb-glx0:mipsel (1.9.1-3) ...
+Setting up libxfixes3:mipsel (1:5.0.1-1) ...
+Setting up libxdamage1:mipsel (1:1.1.4-1) ...
+Setting up libxext6:mipsel (2:1.3.2-1) ...
+Setting up libxxf86vm1:mipsel (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:mipsel (9.1.4-1) ...
+Setting up libpixman-1-0:mipsel (0.30.0-3) ...
Setting up libpng12-0:mipsel (1.2.49-4) ...
-Setting up libxau6:mipsel (1:1.0.7-1) ...
-Setting up libxdmcp6:mipsel (1:1.1.1-1) ...
-Setting up libxcb1:mipsel (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:mipsel (2:1.5.0-1) ...
-Setting up libxcb-render0:mipsel (1.8.1-2) ...
-Setting up libxcb-shm0:mipsel (1.8.1-2) ...
-Setting up libxext6:mipsel (2:1.3.1-2) ...
-Setting up libxrender1:mipsel (1:0.9.7-1) ...
-Setting up libcairo2:mipsel (1.12.14-4) ...
-Setting up libffi6:mipsel (3.0.13-4) ...
-Setting up libglib2.0-0:mipsel (2.36.1-2build1) ...
+Setting up libxcb-shm0:mipsel (1.9.1-3) ...
+Setting up libxrender1:mipsel (1:0.9.8-1) ...
+Setting up libcairo2:mipsel (1.12.14-5) ...
+Setting up libglib2.0-0:mipsel (2.36.3-3) ...
No schema files found: doing nothing.
Setting up libcroco3:mipsel (0.6.8-2) ...
Setting up libdatrie1:mipsel (0.2.6-2) ...
-Setting up libunistring0:mipsel (0.9.3-5) ...
-Setting up libgettextpo0:mipsel (0.18.1.1-10) ...
-Setting up gcc-4.8-base:mipsel (4.8.0-7) ...
-Setting up libgfortran3:mipsel (4.8.0-7) ...
+Setting up libgfortran3:mipsel (4.8.1-8) ...
+Setting up libgraphite2-3:mipsel (1.2.3-1) ...
+Setting up libharfbuzz0a:mipsel (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
@@ -1437,35 +1601,32 @@ Setting up libice6:mipsel (2:1.0.8-2) ...
Setting up libjpeg8:mipsel (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:mipsel (0.1.19-2) ...
-Setting up libxft2:mipsel (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:mipsel (1.30.0-1) ...
+Setting up libpango-1.0-0:mipsel (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:mipsel (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:mipsel (1.32.5-5+b1) ...
Setting up libpaper1:mipsel (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:mipsel (1:8.31-2) ...
Setting up libsm6:mipsel (2:1.2.1-2) ...
Setting up libjbig0:mipsel (2.0-2) ...
-Setting up libtiff5:mipsel (4.0.2-6) ...
+Setting up libtiff5:mipsel (4.0.3-1) ...
+Setting up libunistring0:mipsel (0.9.3-5) ...
+Setting up libxft2:mipsel (2.3.1-1) ...
Setting up libxss1:mipsel (1:1.2.2-1) ...
-Setting up libxt6:mipsel (1:1.1.3-1) ...
-Setting up libmpc3:mipsel (1.0.1-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up gcc-4.6-base:mipsel (4.6.4-2) ...
-Setting up cpp-4.6 (4.6.4-2) ...
-Setting up gcc-4.6 (4.6.4-2) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libasprintf-dev:mipsel (0.18.1.1-10) ...
-Setting up libgettextpo-dev:mipsel (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:mipsel (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up libgfortran-4.8-dev:mipsel (4.8.1-8) ...
+Setting up gfortran-4.8 (4.8.1-8) ...
+Setting up gfortran (4:4.8.1-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -1477,8 +1638,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:mipsel (5.9+20130504-1) ...
-Setting up libncurses5-dev:mipsel (5.9+20130504-1) ...
+Setting up libtinfo-dev:mipsel (5.9+20130608-1) ...
+Setting up libncurses5-dev:mipsel (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:mipsel (1:8.31-2) ...
Setting up zlib1g-dev:mipsel (1:1.2.8.dfsg-1) ...
@@ -1488,25 +1649,24 @@ Setting up libreadline-dev:mipsel (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1~20130512-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1~20130512-1) ...
-Setting up g++-4.6 (4.6.4-2) ...
-Setting up libstdc++6-4.6-dev (4.6.4-2) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 39 not upgraded.
-Checking correctness of dependencies...
-Kernel: Linux 2.6.39-3-loongson-2e mipsel (mips64)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6-dev_2.13-38 libstdc++6_4.7.2-5 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.2.39-2
-Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-0.1 binutils_2.22-8 bsdmainutils_9.0.4 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.20-3 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 debconf_1.5.49 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1:5.14-1 findutils_4.4.2-5 font [...]
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
+Processing triggers for libc-bin ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: Linux 3.2.0-4-sb1-bcm91250a mipsel (mips64)
+Toolchain package versions: binutils_2.23.52.20130620-1 dpkg-dev_1.16.10 g++-4.8_4.8.1-8 gcc-4.8_4.8.1-8 libc6-dev_2.17-7 libstdc++-4.8-dev_4.8.1-8 libstdc++6_4.8.1-8 linux-libc-dev_3.9.8-1
+Package versions: apt_0.9.9.1 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130620-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.20-3 cpp_4:4.8.1-2 cpp-4.8_4.8.1-8 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.19-2 file_1:5.14-2 findutils_4.4. [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -1516,28 +1676,46 @@ Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-0.
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+DEB_BUILD_OPTIONS=parallel=2
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-mipsel-sbuild
+SCHROOT_CHROOT_NAME=sid-mipsel-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-mipsel-sbuild-57236218-19ca-49c8-b8dc-fb48470ccd04
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture mipsel
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -1553,7 +1731,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -1572,26 +1750,28 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1~20130512-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g0 -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
+ double abstol = -1e500; // infinity
+ ^
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -1601,13 +1781,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limm
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -1615,7 +1795,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -1651,9 +1831,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -1683,79 +1863,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_mipsel.deb'.
- dpkg-genchanges -B -mmipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_mipsel.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_mipsel.deb'.
+ dpkg-genchanges -B -mmipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_mipsel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1831
+Build finished at 20130804-1015
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_mipsel.changes:
+──────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_mipsel.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: mipsel
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: mipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: mipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
- .
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- f474bb4af7bd722d3dcb86a4395437cd76d853a0 1618156 r-bioc-limma_3.16.3~dfsg-1_mipsel.deb
+ e707b861e204dcbdc1fd07b974ffc36e40fefd59 863432 r-bioc-limma_3.16.7~dfsg-1_mipsel.deb
Checksums-Sha256:
- 069965fbe8f452bb699604f5a07c1f882ea0e1e0391dc2fcd07ceb95fb51376b 1618156 r-bioc-limma_3.16.3~dfsg-1_mipsel.deb
+ ba3b798ac2bd96a081f308e1ec5e2faf15b0cf3990fb927b3b358c465123a74d 863432 r-bioc-limma_3.16.7~dfsg-1_mipsel.deb
Files:
- af1f5e65629acc4e07863f7193a399f4 1618156 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_mipsel.deb
+ 83bfa45472970c83846cceea6b62d83e 863432 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_mipsel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_mipsel.deb
+r-bioc-limma_3.16.7~dfsg-1_mipsel.deb
─────────────────────────────────────
new debian package, version 2.0.
- size 1618156 bytes: control archive= 1678 bytes.
- 783 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ size 863432 bytes: control archive=1629 bytes.
+ 774 bytes, 16 lines control
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: mipsel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1847
- Depends: libc6 (>= 2.2), r-base-core (>= 3.0.1~20130512-1)
+ Installed-Size: 1070
+ Depends: libc6 (>= 2.2), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -1767,90 +1944,91 @@ r-bioc-limma_3.16.3~dfsg-1_mipsel.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-17 18:31 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
-drwxr-xr-x root/root 0 2013-05-17 18:31 ./usr/share/doc/r-bioc-limma/tests/
--rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 10:14 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 10:14 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 992 2013-08-04 10:14 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 963 2013-08-04 10:14 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 219 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 3098 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 1072 2013-08-04 10:14 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 542 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 5952 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 6386 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 11214 2013-08-04 10:14 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2013-08-04 10:14 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2013-08-04 10:14 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 37564 2013-08-04 10:14 ./usr/lib/R/site-library/limma/html/00Index.html
+drwxr-xr-x root/root 0 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 3441 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 1394 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 6742 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 2577 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 492594 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/limma.rdb
+drwxr-xr-x root/root 0 2013-08-04 10:14 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 4128 2013-08-04 10:14 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 1056 2013-08-04 10:14 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 207873 2013-08-04 10:14 ./usr/lib/R/site-library/limma/R/limma.rdb
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 45597 2013-08-04 10:14 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 104280 2013-08-04 10:14 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 673 2013-08-04 10:14 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 1711 2013-08-04 10:14 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 20708 2013-08-04 10:15 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 2095 2013-08-04 10:14 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 10085 2013-08-04 10:15 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
-drwxr-xr-x root/root 0 2013-05-17 18:29 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 18:29 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/limma/
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 494649 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 1406 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 2567 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 3403 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6703 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/AnIndex
-drwxr-xr-x root/root 0 2013-05-17 18:29 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 1056 2013-05-17 18:29 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 206554 2013-05-17 18:29 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 4116 2013-05-17 18:29 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 963 2013-05-17 18:29 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 10085 2013-05-17 18:30 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 102936 2013-05-17 18:29 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 45597 2013-05-17 18:29 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 673 2013-05-17 18:29 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 1711 2013-05-17 18:29 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 806089 2013-05-17 18:29 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2013-05-17 18:30 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 37337 2013-05-17 18:30 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 992 2013-05-17 18:29 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 541 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 219 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 3089 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 5944 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 1072 2013-05-17 18:29 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6375 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/Rd.rds
-drwxr-xr-x root/root 0 2013-05-17 18:31 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10704 2013-05-17 18:31 ./usr/lib/R/site-library/limma/libs/limma.so
--rw-r--r-- root/root 2046 2013-05-17 18:29 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 11214 2013-05-17 18:29 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mipsel-sbuild-10ee009b-bf9f-41cc-8ef1-e3fdfcc5afaa/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: mipsel
-Build-Space: 5888
-Build-Time: 132
+Build Architecture: mipsel
+Build-Space: 3576
+Build-Time: 113
Distribution: sid
-Install-Time: 284
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: mipsel
+Install-Time: 332
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: mipsel
Package: r-bioc-limma
-Package-Time: 563
-Source-Version: 3.16.3~dfsg-1
-Space: 5888
+Package-Time: 551
+Source-Version: 3.16.7~dfsg-1
+Space: 3576
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1831
-Build needed 00:09:23, 5888k disc space
-Signature with key '6EE6C7C2' requested:
+Finished at 20130804-1015
+Build needed 00:09:11, 3576k disc space
+Signature with key 'B1DFE6AC' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_mipsel.changes B1DFE6AC
+Successfully signed changes file
diff --git a/mipsel.log b/mipsel.log
index 855dfa1..4db7b43 100644
--- a/mipsel.log
+++ b/mipsel.log
@@ -1,65 +1,75 @@
-From buildd at eysler.debian.org Fri May 17 18:31:24 2013
-Return-path: <buildd at eysler.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at rem.debian.org Sun Aug 04 10:16:49 2013
+Return-path: <buildd at rem.debian.org>
+Received: from mailly.debian.org ([2001:41b8:202:deb:6564:a62:52c3:4b72])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
- by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
- id 1UdPR5-0005DQ-Lu
- for logs at buildd.debian.org; Fri, 17 May 2013 18:31:24 +0000
-Received: from eysler.debian.org ([2001:858:2:2:1a1a:0:563b:7698])
+ CN=mailly.debian.org, EMAIL=hostmaster at mailly.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
+ (Exim 4.72) (envelope-from <buildd at rem.debian.org>)
+ id 1V5vMn-0006I9-Oh
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:16:49 +0000
+Received: from rem.debian.org ([2001:41b8:202:deb:202:4cff:fefe:d06])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=eysler.debian.org, EMAIL=hostmaster at eysler.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at eysler.debian.org>)
- id 1UdPR4-0000ij-Ke
- for logs at buildd.debian.org; Fri, 17 May 2013 18:31:22 +0000
-Received: from buildd by eysler.debian.org with local (Exim 4.72)
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- for logs at buildd.debian.org; Fri, 17 May 2013 18:31:21 +0000
-Date: Fri, 17 May 2013 18:31:21 +0000
-Message-Id: <E1UdPR3-0007Hr-Oy at eysler.debian.org>
-From: buildd on eysler <buildd at eysler.debian.org>
+ CN=rem.debian.org, EMAIL=hostmaster at rem.debian.org (verified)
+ by mailly.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
+ (Exim 4.80) (envelope-from <buildd at rem.debian.org>)
+ id 1V5vMm-000075-RH
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:16:48 +0000
+Received: from buildd by rem.debian.org with local (Exim 4.80)
+ (envelope-from <buildd at rem.debian.org>) id 1V5vLk-0003jv-8h
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 10:15:44 +0000
+Content-Transfer-Encoding: binary
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 10:15:43 +0000
+From: buildd on rem <buildd at rem.debian.org>
To: logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on mipsel
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on mipsel
(dist=sid)
-Content-Type: text/plain; charset=UTF-8
-Content-Transfer-Encoding: 8bit
+Key-Id: B1DFE6AC
+Message-Id: <E1V5vLk-0003jv-8h at rem.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on eysler.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on rem.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (mipsel) 17 May 2013 18:21 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (mipsel) 04 Aug 2013 10:06 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: mipsel
-Get:1 http://ftp.at.debian.org unstable Release.gpg [1571 B]
-Get:2 http://ftp.at.debian.org unstable Release [203 kB]
-Get:3 http://incoming.debian.org unstable Release.gpg [1571 B]
-Get:4 http://ftp.at.debian.org unstable/main Sources [6727 kB]
-Get:5 http://incoming.debian.org buildd-unstable Release.gpg [1571 B]
-Get:6 http://incoming.debian.org unstable Release [203 kB]
-Get:7 http://incoming.debian.org buildd-unstable Release [109 kB]
-Get:8 http://incoming.debian.org unstable/main Sources [6727 kB]
-Get:9 http://ftp.at.debian.org unstable/contrib Sources [53.7 kB]
-Get:10 http://ftp.at.debian.org unstable/non-free Sources [103 kB]
-Get:11 http://ftp.at.debian.org unstable/main mipsel Packages [6199 kB]
-Get:12 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:13 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:14 http://incoming.debian.org unstable/main mipsel Packages [6199 kB]
-Get:15 http://incoming.debian.org unstable/contrib mipsel Packages [37.4 kB]
-Get:16 http://incoming.debian.org buildd-unstable/main Sources [97.6 kB]
-Get:17 http://ftp.at.debian.org unstable/contrib mipsel Packages [37.4 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib Sources [14 B]
-Get:19 http://incoming.debian.org buildd-unstable/non-free Sources [2211 B]
-Get:20 http://incoming.debian.org buildd-unstable/main mipsel Packages [82.9 kB]
-Get:21 http://incoming.debian.org buildd-unstable/contrib mipsel Packages [14 B]
-Fetched 26.9 MB in 1min 43s (260 kB/s)
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: mipsel
+Host Architecture: mipsel
+Build Architecture: mipsel
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-oP1_ii/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-oP1_ii' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-mipsel-sbuild-57236218-19ca-49c8-b8dc-fb48470ccd04' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://ftp.de.debian.org unstable InRelease [204 kB]
+Get:2 http://incoming.debian.org unstable InRelease [204 kB]
+Get:3 http://ftp.de.debian.org unstable/main Sources [6890 kB]
+Get:4 http://incoming.debian.org buildd-unstable InRelease [111 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:6 http://ftp.de.debian.org unstable/contrib Sources [55.4 kB]
+Get:7 http://ftp.de.debian.org unstable/non-free Sources [105 kB]
+Get:8 http://ftp.de.debian.org unstable/main mipsel Packages [6273 kB]
+Get:9 http://ftp.de.debian.org unstable/contrib mipsel Packages [37.9 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:12 http://incoming.debian.org unstable/main mipsel Packages [6273 kB]
+Get:13 http://incoming.debian.org unstable/contrib mipsel Packages [37.9 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [101 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2795 B]
+Get:17 http://incoming.debian.org buildd-unstable/main mipsel Packages [69.1 kB]
+Get:18 http://incoming.debian.org buildd-unstable/contrib mipsel Packages [14 B]
+Fetched 27.4 MB in 1min 11s (384 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -79,310 +89,359 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://ftp.at.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://ftp.at.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://ftp.at.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 0s (2213 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (234 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-keyjJb/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: already installed (1.18.4-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-The following packages were automatically installed and are no longer required:
- groff-base libpipeline1 man-db
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded.
-Removing negative dependencies:
+The following package was automatically installed and is no longer required:
+ gcc-4.6-base
+Use 'apt-get autoremove' to remove it.
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 37 not upgraded.
+Need to get 0 B/710 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 10931 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-rSGnX6/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-The following packages were automatically installed and are no longer required:
- groff-base libpipeline1 man-db
-Use 'apt-get autoremove' to remove them.
-0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.1)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-0.1)
-bsdutils: already installed (1:2.20.1-5.3)
-coreutils: already installed (8.20-3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.13-38)
-login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.3)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-20)
-sed: already installed (4.2.1-10)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-0.1)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (2.13-38)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130516
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
+The following package was automatically installed and is no longer required:
+ gcc-4.6-base
+Use 'apt-get autoremove' to remove it.
The following extra packages will be installed:
- cpp-4.6 file fontconfig fontconfig-config fonts-dejavu-core g++-4.6 gcc-4.6
- gcc-4.6-base gcc-4.8-base gettext gettext-base gfortran gfortran-4.6
- html2text intltool-debian libasprintf-dev libasprintf0c2 libblas-dev
- libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi6
- libfontconfig1 libfreetype6 libgettextpo-dev libgettextpo0 libgfortran3
- libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3
- libmagic1 libmpc3 libncurses5 libncurses5-dev libpango1.0-0 libpaper-utils
- libpaper1 libpcre3-dev libpcrecpp0 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libstdc++6-4.6-dev libthai-data
- libthai0 libtiff5 libtinfo-dev libtinfo5 libunistring0 libx11-6 libx11-data
- libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
- libxml2 libxrender1 libxss1 libxt6 ncurses-bin po-debconf r-base-core tcl8.5
- tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g zlib1g-dev
+ bsdmainutils cdbs cpp-4.8 debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core g++-4.8 gcc-4.8 gcc-4.8-base gettext gettext-base gfortran
+ gfortran-4.8 groff-base intltool-debian libasprintf0c2 libatomic1
+ libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libdrm2
+ libegl1-mesa libexpat1 libffi6 libfontconfig1 libfreetype6 libgbm1
+ libgcc-4.8-dev libgcc1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0a libice6
+ libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1
+ libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
+ libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6
+ libstdc++-4.8-dev libstdc++6 libthai-data libthai0 libtiff5 libtinfo-dev
+ libudev0 libunistring0 libwayland-client0 libwayland-server0 libx11-6
+ libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0 libxcb-render0
+ libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6
+ libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6 libxxf86vm1
+ man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- devscripts gcc-4.6-locales dh-make g++-4.6-multilib gcc-4.6-doc
- libstdc++6-4.6-dbg gcc-4.6-multilib libmudflap0-4.6-dev libgcc1-dbg
- libgomp1-dbg libquadmath-dbg libmudflap0-dbg libcloog-ppl1 libcloog-ppl0
- libppl-c4 libppl12 libppl9 gettext-doc gfortran-multilib gfortran-doc
- gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg ncurses-doc
- ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp libstdc++6-4.6-doc libmail-box-perl ess r-doc-info
- r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
+ wamerican wordlist whois vacation devscripts gcc-4.8-locales dh-make
+ g++-4.8-multilib gcc-4.8-doc libstdc++6-4.8-dbg gcc-4.8-multilib
+ libmudflap0-4.8-dev libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg
+ libasan0-dbg libtsan0-dbg libbacktrace1-dbg libquadmath-dbg libmudflap0-dbg
+ gettext-doc gfortran-multilib gfortran-doc gfortran-4.8-multilib
+ gfortran-4.8-doc libgfortran3-dbg groff ncurses-doc ttf-baekmuk
+ ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
+ ttf-arphic-bkai00mp libstdc++-4.8-doc less www-browser libmail-box-perl
+ r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint libglib2.0-data shared-mime-info
- libgpm2 xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
- cdbs debhelper file fontconfig fontconfig-config fonts-dejavu-core
- gcc-4.8-base gettext gettext-base gfortran gfortran-4.6 html2text
- intltool-debian libasprintf-dev libasprintf0c2 libblas-dev libblas3
- libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1
- libfreetype6 libgettextpo-dev libgettextpo0 libgfortran3 libglib2.0-0
- libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1
- libmpc3 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3-dev
- libpcrecpp0 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libthai-data libthai0 libtiff5 libtinfo-dev
- libunistring0 libx11-6 libx11-data libxau6 libxcb-render0 libxcb-shm0
- libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxrender1 libxss1 libxt6
- po-debconf r-base-core r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip
- x11-common xdg-utils zip zlib1g-dev
+ bsdmainutils cdbs debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.8 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran-4.8-dev libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgraphite2-3 libharfbuzz0a libice6 libjbig0
+ libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
+ libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
+ libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
+ libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
+ libtiff5 libtinfo-dev libudev0 libunistring0 libwayland-client0
+ libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0
+ libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1
+ libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1
+ libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libncurses5 libstdc++6-4.6-dev
- libtinfo5 ncurses-bin zlib1g
-9 upgraded, 79 newly installed, 0 to remove and 39 not upgraded.
-Need to get 69.6 MB of archives.
-After this operation, 114 MB of additional disk space will be used.
-Get:1 http://ftp.at.debian.org/debian/ unstable/main libtinfo5 mipsel 5.9+20130504-1 [287 kB]
-Get:2 http://ftp.at.debian.org/debian/ unstable/main libncurses5 mipsel 5.9+20130504-1 [99.9 kB]
-Get:3 http://ftp.at.debian.org/debian/ unstable/main ncurses-bin mipsel 5.9+20130504-1 [359 kB]
-Get:4 http://ftp.at.debian.org/debian/ unstable/main zlib1g mipsel 1:1.2.8.dfsg-1 [89.3 kB]
-Get:5 http://ftp.at.debian.org/debian/ unstable/main libasprintf0c2 mipsel 0.18.1.1-10 [27.1 kB]
-Get:6 http://ftp.at.debian.org/debian/ unstable/main libmagic1 mipsel 1:5.14-1 [217 kB]
-Get:7 http://ftp.at.debian.org/debian/ unstable/main libxml2 mipsel 2.8.0+dfsg1-7+nmu1 [868 kB]
-Get:8 http://ftp.at.debian.org/debian/ unstable/main libexpat1 mipsel 2.1.0-3 [144 kB]
-Get:9 http://ftp.at.debian.org/debian/ unstable/main libfreetype6 mipsel 2.4.9-1.1 [434 kB]
-Get:10 http://ftp.at.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:11 http://ftp.at.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:12 http://ftp.at.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:13 http://ftp.at.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:14 http://ftp.at.debian.org/debian/ unstable/main libfontconfig1 mipsel 2.9.0-7.1 [301 kB]
-Get:15 http://ftp.at.debian.org/debian/ unstable/main libpixman-1-0 mipsel 0.26.0-4 [383 kB]
-Get:16 http://ftp.at.debian.org/debian/ unstable/main libpng12-0 mipsel 1.2.49-4 [185 kB]
-Get:17 http://ftp.at.debian.org/debian/ unstable/main libxau6 mipsel 1:1.0.7-1 [18.2 kB]
-Get:18 http://ftp.at.debian.org/debian/ unstable/main libxdmcp6 mipsel 1:1.1.1-1 [26.1 kB]
-Get:19 http://ftp.at.debian.org/debian/ unstable/main libxcb1 mipsel 1.8.1-2 [41.2 kB]
-Get:20 http://ftp.at.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:21 http://ftp.at.debian.org/debian/ unstable/main libx11-6 mipsel 2:1.5.0-1 [868 kB]
-Get:22 http://ftp.at.debian.org/debian/ unstable/main libxcb-render0 mipsel 1.8.1-2 [16.3 kB]
-Get:23 http://ftp.at.debian.org/debian/ unstable/main libxcb-shm0 mipsel 1.8.1-2 [10.2 kB]
-Get:24 http://ftp.at.debian.org/debian/ unstable/main libxext6 mipsel 2:1.3.1-2 [51.3 kB]
-Get:25 http://ftp.at.debian.org/debian/ unstable/main libxrender1 mipsel 1:0.9.7-1 [30.6 kB]
-Get:26 http://ftp.at.debian.org/debian/ unstable/main libcairo2 mipsel 1.12.14-4 [1015 kB]
-Get:27 http://ftp.at.debian.org/debian/ unstable/main libffi6 mipsel 3.0.13-4 [19.9 kB]
-Get:28 http://ftp.at.debian.org/debian/ unstable/main libglib2.0-0 mipsel 2.36.1-2build1 [1906 kB]
-Get:29 http://ftp.at.debian.org/debian/ unstable/main libcroco3 mipsel 0.6.8-2 [120 kB]
-Get:30 http://ftp.at.debian.org/debian/ unstable/main libdatrie1 mipsel 0.2.6-2 [29.2 kB]
-Get:31 http://ftp.at.debian.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
-Get:32 http://ftp.at.debian.org/debian/ unstable/main libgettextpo0 mipsel 0.18.1.1-10 [140 kB]
-Get:33 http://ftp.at.debian.org/debian/ unstable/main gcc-4.8-base mipsel 4.8.0-7 [148 kB]
-Get:34 http://ftp.at.debian.org/debian/ unstable/main libgfortran3 mipsel 4.8.0-7 [237 kB]
-Get:35 http://ftp.at.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:36 http://ftp.at.debian.org/debian/ unstable/main libice6 mipsel 2:1.0.8-2 [56.7 kB]
-Get:37 http://ftp.at.debian.org/debian/ unstable/main libjpeg8 mipsel 8d-1 [145 kB]
-Get:38 http://ftp.at.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:39 http://ftp.at.debian.org/debian/ unstable/main libthai0 mipsel 0.1.19-2 [41.6 kB]
-Get:40 http://ftp.at.debian.org/debian/ unstable/main libxft2 mipsel 2.3.1-1 [59.8 kB]
-Get:41 http://ftp.at.debian.org/debian/ unstable/main fontconfig mipsel 2.9.0-7.1 [348 kB]
-Get:42 http://ftp.at.debian.org/debian/ unstable/main libpango1.0-0 mipsel 1.30.0-1 [439 kB]
-Get:43 http://ftp.at.debian.org/debian/ unstable/main libpaper1 mipsel 1.1.24+nmu2 [21.4 kB]
-Get:44 http://ftp.at.debian.org/debian/ unstable/main libpcrecpp0 mipsel 1:8.31-2 [127 kB]
-Get:45 http://ftp.at.debian.org/debian/ unstable/main libsm6 mipsel 2:1.2.1-2 [32.5 kB]
-Get:46 http://ftp.at.debian.org/debian/ unstable/main libjbig0 mipsel 2.0-2 [32.4 kB]
-Get:47 http://ftp.at.debian.org/debian/ unstable/main libtiff5 mipsel 4.0.2-6 [229 kB]
-Get:48 http://ftp.at.debian.org/debian/ unstable/main libxss1 mipsel 1:1.2.2-1 [17.3 kB]
-Get:49 http://ftp.at.debian.org/debian/ unstable/main libxt6 mipsel 1:1.1.3-1 [192 kB]
-Get:50 http://ftp.at.debian.org/debian/ unstable/main libmpc3 mipsel 1.0.1-1 [40.4 kB]
-Get:51 http://ftp.at.debian.org/debian/ unstable/main file mipsel 1:5.14-1 [53.9 kB]
-Get:52 http://ftp.at.debian.org/debian/ unstable/main gettext-base mipsel 0.18.1.1-10 [148 kB]
-Get:53 http://ftp.at.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:54 http://ftp.at.debian.org/debian/ unstable/main libstdc++6-4.6-dev mipsel 4.6.4-2 [1698 kB]
-Get:55 http://ftp.at.debian.org/debian/ unstable/main g++-4.6 mipsel 4.6.4-2 [4089 kB]
-Get:56 http://ftp.at.debian.org/debian/ unstable/main gcc-4.6 mipsel 4.6.4-2 [3990 kB]
-Get:57 http://ftp.at.debian.org/debian/ unstable/main cpp-4.6 mipsel 4.6.4-2 [3713 kB]
-Get:58 http://ftp.at.debian.org/debian/ unstable/main gcc-4.6-base mipsel 4.6.4-2 [143 kB]
-Get:59 http://ftp.at.debian.org/debian/ unstable/main html2text mipsel 1.3.2a-15 [103 kB]
-Get:60 http://ftp.at.debian.org/debian/ unstable/main libasprintf-dev mipsel 0.18.1.1-10 [26.9 kB]
-Get:61 http://ftp.at.debian.org/debian/ unstable/main libgettextpo-dev mipsel 0.18.1.1-10 [188 kB]
-Get:62 http://ftp.at.debian.org/debian/ unstable/main gettext mipsel 0.18.1.1-10 [1734 kB]
-Get:63 http://ftp.at.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:64 http://ftp.at.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:65 http://ftp.at.debian.org/debian/ unstable/main debhelper all 9.20130516 [708 kB]
-Get:66 http://ftp.at.debian.org/debian/ unstable/main gfortran-4.6 mipsel 4.6.4-2 [4314 kB]
-Get:67 http://ftp.at.debian.org/debian/ unstable/main gfortran mipsel 4:4.6.3-8 [1142 B]
-Get:68 http://ftp.at.debian.org/debian/ unstable/main libblas3 mipsel 1.2.20110419-5 [202 kB]
-Get:69 http://ftp.at.debian.org/debian/ unstable/main libblas-dev mipsel 1.2.20110419-5 [241 kB]
-Get:70 http://ftp.at.debian.org/debian/ unstable/main libbz2-dev mipsel 1.0.6-4 [37.3 kB]
-Get:71 http://ftp.at.debian.org/debian/ unstable/main libjpeg8-dev mipsel 8d-1 [257 kB]
-Get:72 http://ftp.at.debian.org/debian/ unstable/main liblapack3 mipsel 3.4.2+dfsg-1 [4388 kB]
-Get:73 http://ftp.at.debian.org/debian/ unstable/main liblapack-dev mipsel 3.4.2+dfsg-1 [5139 kB]
-Get:74 http://ftp.at.debian.org/debian/ unstable/main libtinfo-dev mipsel 5.9+20130504-1 [105 kB]
-Get:75 http://ftp.at.debian.org/debian/ unstable/main libncurses5-dev mipsel 5.9+20130504-1 [226 kB]
-Get:76 http://ftp.at.debian.org/debian/ unstable/main libpaper-utils mipsel 1.1.24+nmu2 [18.3 kB]
-Get:77 http://ftp.at.debian.org/debian/ unstable/main libpcre3-dev mipsel 1:8.31-2 [365 kB]
-Get:78 http://ftp.at.debian.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.8.dfsg-1 [216 kB]
-Get:79 http://ftp.at.debian.org/debian/ unstable/main libpng12-dev mipsel 1.2.49-4 [275 kB]
-Get:80 http://ftp.at.debian.org/debian/ unstable/main libreadline6-dev mipsel 6.2+dfsg-0.1 [199 kB]
-Get:81 http://ftp.at.debian.org/debian/ unstable/main libreadline-dev mipsel 6.2+dfsg-0.1 [896 B]
-Get:82 http://ftp.at.debian.org/debian/ unstable/main zip mipsel 3.0-7 [334 kB]
-Get:83 http://ftp.at.debian.org/debian/ unstable/main unzip mipsel 6.0-9 [189 kB]
-Get:84 http://ftp.at.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:85 http://ftp.at.debian.org/debian/ unstable/main tcl8.5 mipsel 8.5.11-2 [1612 kB]
-Get:86 http://ftp.at.debian.org/debian/ unstable/main tk8.5 mipsel 8.5.11-2 [1167 kB]
-Get:87 http://ftp.at.debian.org/debian/ unstable/main r-base-core mipsel 3.0.1~20130512-1 [21.0 MB]
-Get:88 http://ftp.at.debian.org/debian/ unstable/main r-base-dev all 3.0.1~20130512-1 [3910 B]
+ cpp-4.8 g++-4.8 gcc-4.8 gcc-4.8-base libatomic1 libgcc-4.8-dev libgcc1
+ libgomp1 libstdc++-4.8-dev libstdc++6
+10 upgraded, 99 newly installed, 0 to remove and 27 not upgraded.
+Need to get 85.1 MB/85.1 MB of archives.
+After this operation, 134 MB of additional disk space will be used.
+Get:1 http://ftp.de.debian.org/debian/ unstable/main libgomp1 mipsel 4.8.1-8 [27.8 kB]
+Get:2 http://ftp.de.debian.org/debian/ unstable/main gcc-4.8-base mipsel 4.8.1-8 [150 kB]
+Get:3 http://ftp.de.debian.org/debian/ unstable/main libstdc++6 mipsel 4.8.1-8 [309 kB]
+Get:4 http://ftp.de.debian.org/debian/ unstable/main libatomic1 mipsel 4.8.1-8 [7356 B]
+Get:5 http://ftp.de.debian.org/debian/ unstable/main cpp-4.8 mipsel 4.8.1-8 [5827 kB]
+Get:6 http://ftp.de.debian.org/debian/ unstable/main libstdc++-4.8-dev mipsel 4.8.1-8 [1735 kB]
+Get:7 http://ftp.de.debian.org/debian/ unstable/main g++-4.8 mipsel 4.8.1-8 [9264 kB]
+Get:8 http://ftp.de.debian.org/debian/ unstable/main gcc-4.8 mipsel 4.8.1-8 [6382 kB]
+Get:9 http://ftp.de.debian.org/debian/ unstable/main libgcc-4.8-dev mipsel 4.8.1-8 [215 kB]
+Get:10 http://ftp.de.debian.org/debian/ unstable/main libgcc1 mipsel 1:4.8.1-8 [68.7 kB]
+Get:11 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 mipsel 1.2.4-1 [38.6 kB]
+Get:12 http://ftp.de.debian.org/debian/ unstable/main libudev0 mipsel 175-7.2 [124 kB]
+Get:13 http://ftp.de.debian.org/debian/ unstable/main groff-base mipsel 1.22.2-3 [715 kB]
+Get:14 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils mipsel 9.0.5 [211 kB]
+Get:15 http://ftp.de.debian.org/debian/ unstable/main man-db mipsel 2.6.5-2 [951 kB]
+Get:16 http://ftp.de.debian.org/debian/ unstable/main libasprintf0c2 mipsel 0.18.3-1 [29.7 kB]
+Get:17 http://ftp.de.debian.org/debian/ unstable/main libmagic1 mipsel 1:5.14-2 [217 kB]
+Get:18 http://ftp.de.debian.org/debian/ unstable/main libxml2 mipsel 2.9.1+dfsg1-2 [883 kB]
+Get:19 http://ftp.de.debian.org/debian/ unstable/main libdrm2 mipsel 2.4.45-3 [465 kB]
+Get:20 http://ftp.de.debian.org/debian/ unstable/main libglapi-mesa mipsel 9.1.4-1 [63.2 kB]
+Get:21 http://ftp.de.debian.org/debian/ unstable/main libxau6 mipsel 1:1.0.8-1 [20.3 kB]
+Get:22 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 mipsel 1:1.1.1-1 [26.1 kB]
+Get:23 http://ftp.de.debian.org/debian/ unstable/main libxcb1 mipsel 1.9.1-3 [42.0 kB]
+Get:24 http://ftp.de.debian.org/debian/ unstable/main libxcb-dri2-0 mipsel 1.9.1-3 [12.2 kB]
+Get:25 http://ftp.de.debian.org/debian/ unstable/main libgbm1 mipsel 9.1.4-1 [343 kB]
+Get:26 http://ftp.de.debian.org/debian/ unstable/main libffi6 mipsel 3.0.13-4 [19.9 kB]
+Get:27 http://ftp.de.debian.org/debian/ unstable/main libwayland-client0 mipsel 1.1.0-2 [20.6 kB]
+Get:28 http://ftp.de.debian.org/debian/ unstable/main libwayland-server0 mipsel 1.1.0-2 [28.4 kB]
+Get:29 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:30 http://ftp.de.debian.org/debian/ unstable/main libx11-6 mipsel 2:1.6.0-1 [885 kB]
+Get:31 http://ftp.de.debian.org/debian/ unstable/main libx11-xcb1 mipsel 2:1.6.0-1 [153 kB]
+Get:32 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 mipsel 1.9.1-3 [16.8 kB]
+Get:33 http://ftp.de.debian.org/debian/ unstable/main libxcb-shape0 mipsel 1.9.1-3 [11.0 kB]
+Get:34 http://ftp.de.debian.org/debian/ unstable/main libxcb-xfixes0 mipsel 1.9.1-3 [13.6 kB]
+Get:35 http://ftp.de.debian.org/debian/ unstable/main libegl1-mesa mipsel 9.1.4-1 [74.6 kB]
+Get:36 http://ftp.de.debian.org/debian/ unstable/main libexpat1 mipsel 2.1.0-4 [141 kB]
+Get:37 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 mipsel 2.4.9-1.1 [434 kB]
+Get:38 http://ftp.de.debian.org/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:39 http://ftp.de.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:40 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:41 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:42 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 mipsel 2.10.2-2 [323 kB]
+Get:43 http://ftp.de.debian.org/debian/ unstable/main libxcb-glx0 mipsel 1.9.1-3 [25.3 kB]
+Get:44 http://ftp.de.debian.org/debian/ unstable/main libxfixes3 mipsel 1:5.0.1-1 [21.8 kB]
+Get:45 http://ftp.de.debian.org/debian/ unstable/main libxdamage1 mipsel 1:1.1.4-1 [15.0 kB]
+Get:46 http://ftp.de.debian.org/debian/ unstable/main libxext6 mipsel 2:1.3.2-1 [51.7 kB]
+Get:47 http://ftp.de.debian.org/debian/ unstable/main libxxf86vm1 mipsel 1:1.1.2-1+deb7u1 [18.7 kB]
+Get:48 http://ftp.de.debian.org/debian/ unstable/main libgl1-mesa-glx mipsel 9.1.4-1 [117 kB]
+Get:49 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 mipsel 0.30.0-3 [456 kB]
+Get:50 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 mipsel 1.2.49-4 [185 kB]
+Get:51 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 mipsel 1.9.1-3 [10.6 kB]
+Get:52 http://ftp.de.debian.org/debian/ unstable/main libxrender1 mipsel 1:0.9.8-1 [31.6 kB]
+Get:53 http://ftp.de.debian.org/debian/ unstable/main libcairo2 mipsel 1.12.14-5 [1052 kB]
+Get:54 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 mipsel 2.36.3-3 [1886 kB]
+Get:55 http://ftp.de.debian.org/debian/ unstable/main libcroco3 mipsel 0.6.8-2 [120 kB]
+Get:56 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 mipsel 0.2.6-2 [29.2 kB]
+Get:57 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 mipsel 4.8.1-8 [231 kB]
+Get:58 http://ftp.de.debian.org/debian/ unstable/main libgraphite2-3 mipsel 1.2.3-1 [61.1 kB]
+Get:59 http://ftp.de.debian.org/debian/ unstable/main libharfbuzz0a mipsel 0.9.19-1 [439 kB]
+Get:60 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:61 http://ftp.de.debian.org/debian/ unstable/main libice6 mipsel 2:1.0.8-2 [56.7 kB]
+Get:62 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 mipsel 8d-1 [145 kB]
+Get:63 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:64 http://ftp.de.debian.org/debian/ unstable/main libthai0 mipsel 0.1.19-2 [41.6 kB]
+Get:65 http://ftp.de.debian.org/debian/ unstable/main fontconfig mipsel 2.10.2-2 [374 kB]
+Get:66 http://ftp.de.debian.org/debian/ unstable/main libpango-1.0-0 mipsel 1.32.5-5+b1 [252 kB]
+Get:67 http://ftp.de.debian.org/debian/ unstable/main libpangoft2-1.0-0 mipsel 1.32.5-5+b1 [183 kB]
+Get:68 http://ftp.de.debian.org/debian/ unstable/main libpangocairo-1.0-0 mipsel 1.32.5-5+b1 [173 kB]
+Get:69 http://ftp.de.debian.org/debian/ unstable/main libpaper1 mipsel 1.1.24+nmu2 [21.4 kB]
+Get:70 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 mipsel 1:8.31-2 [127 kB]
+Get:71 http://ftp.de.debian.org/debian/ unstable/main libsm6 mipsel 2:1.2.1-2 [32.5 kB]
+Get:72 http://ftp.de.debian.org/debian/ unstable/main libjbig0 mipsel 2.0-2 [32.4 kB]
+Get:73 http://ftp.de.debian.org/debian/ unstable/main libtiff5 mipsel 4.0.3-1 [231 kB]
+Get:74 http://ftp.de.debian.org/debian/ unstable/main libunistring0 mipsel 0.9.3-5 [407 kB]
+Get:75 http://ftp.de.debian.org/debian/ unstable/main libxft2 mipsel 2.3.1-1 [59.8 kB]
+Get:76 http://ftp.de.debian.org/debian/ unstable/main libxss1 mipsel 1:1.2.2-1 [17.3 kB]
+Get:77 http://ftp.de.debian.org/debian/ unstable/main libxt6 mipsel 1:1.1.3-1+deb7u1 [192 kB]
+Get:78 http://ftp.de.debian.org/debian/ unstable/main file mipsel 1:5.14-2 [53.9 kB]
+Get:79 http://ftp.de.debian.org/debian/ unstable/main gettext-base mipsel 0.18.3-1 [162 kB]
+Get:80 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:81 http://ftp.de.debian.org/debian/ unstable/main gettext mipsel 0.18.3-1 [1867 kB]
+Get:82 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:83 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:84 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:85 http://ftp.de.debian.org/debian/ unstable/main libgfortran-4.8-dev mipsel 4.8.1-8 [357 kB]
+Get:86 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.8 mipsel 4.8.1-8 [6190 kB]
+Get:87 http://ftp.de.debian.org/debian/ unstable/main gfortran mipsel 4:4.8.1-2 [1136 B]
+Get:88 http://ftp.de.debian.org/debian/ unstable/main libblas3 mipsel 1.2.20110419-5 [202 kB]
+Get:89 http://ftp.de.debian.org/debian/ unstable/main libblas-dev mipsel 1.2.20110419-5 [241 kB]
+Get:90 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev mipsel 1.0.6-4 [37.3 kB]
+Get:91 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev mipsel 8d-1 [257 kB]
+Get:92 http://ftp.de.debian.org/debian/ unstable/main liblapack3 mipsel 3.4.2+dfsg-1 [4388 kB]
+Get:93 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev mipsel 3.4.2+dfsg-1 [5139 kB]
+Get:94 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev mipsel 5.9+20130608-1 [105 kB]
+Get:95 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev mipsel 5.9+20130608-1 [226 kB]
+Get:96 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils mipsel 1.1.24+nmu2 [18.3 kB]
+Get:97 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev mipsel 1:8.31-2 [365 kB]
+Get:98 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev mipsel 1:1.2.8.dfsg-1 [216 kB]
+Get:99 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev mipsel 1.2.49-4 [275 kB]
+Get:100 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev mipsel 6.2+dfsg-0.1 [199 kB]
+Get:101 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev mipsel 6.2+dfsg-0.1 [896 B]
+Get:102 http://ftp.de.debian.org/debian/ unstable/main zip mipsel 3.0-7 [334 kB]
+Get:103 http://ftp.de.debian.org/debian/ unstable/main unzip mipsel 6.0-9 [189 kB]
+Get:104 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:105 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 mipsel 8.5.14-2 [1628 kB]
+Get:106 http://ftp.de.debian.org/debian/ unstable/main tk8.5 mipsel 8.5.14-2 [1176 kB]
+Get:107 http://ftp.de.debian.org/debian/ unstable/main r-base-core mipsel 3.0.1-6 [20.9 MB]
+Get:108 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 69.6 MB in 33s (2063 kB/s)
-(Reading database ... 11331 files and directories currently installed.)
-Preparing to replace libtinfo5:mipsel 5.9-10 (using .../libtinfo5_5.9+20130504-1_mipsel.deb) ...
-Unpacking replacement libtinfo5:mipsel ...
-Setting up libtinfo5:mipsel (5.9+20130504-1) ...
-(Reading database ... 11331 files and directories currently installed.)
-Preparing to replace libncurses5:mipsel 5.9-10 (using .../libncurses5_5.9+20130504-1_mipsel.deb) ...
-Unpacking replacement libncurses5:mipsel ...
-Setting up libncurses5:mipsel (5.9+20130504-1) ...
-(Reading database ... 11331 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_mipsel.deb) ...
-Unpacking replacement ncurses-bin ...
-Processing triggers for man-db ...
-Setting up ncurses-bin (5.9+20130504-1) ...
-(Reading database ... 11329 files and directories currently installed.)
-Preparing to replace zlib1g:mipsel 1:1.2.7.dfsg-13 (using .../zlib1g_1%3a1.2.8.dfsg-1_mipsel.deb) ...
-Unpacking replacement zlib1g:mipsel ...
-Setting up zlib1g:mipsel (1:1.2.8.dfsg-1) ...
+Fetched 85.1 MB in 2min 24s (587 kB/s)
+(Reading database ... 10931 files and directories currently installed.)
+Preparing to replace libgomp1:mipsel 4.8.1-6 (using .../libgomp1_4.8.1-8_mipsel.deb) ...
+Unpacking replacement libgomp1:mipsel ...
+Preparing to replace gcc-4.8-base:mipsel 4.8.1-6 (using .../gcc-4.8-base_4.8.1-8_mipsel.deb) ...
+Unpacking replacement gcc-4.8-base:mipsel ...
+Setting up gcc-4.8-base:mipsel (4.8.1-8) ...
+(Reading database ... 10931 files and directories currently installed.)
+Preparing to replace libstdc++6:mipsel 4.8.1-6 (using .../libstdc++6_4.8.1-8_mipsel.deb) ...
+Unpacking replacement libstdc++6:mipsel ...
+Preparing to replace libgcc1:mipsel 1:4.8.1-6 (using .../libgcc1_1%3a4.8.1-8_mipsel.deb) ...
+Unpacking replacement libgcc1:mipsel ...
+Setting up libgcc1:mipsel (1:4.8.1-8) ...
+Setting up libstdc++6:mipsel (4.8.1-8) ...
+Processing triggers for libc-bin ...
+(Reading database ... 10931 files and directories currently installed.)
+Preparing to replace libatomic1:mipsel 4.8.1-6 (using .../libatomic1_4.8.1-8_mipsel.deb) ...
+Unpacking replacement libatomic1:mipsel ...
+Preparing to replace cpp-4.8 4.8.1-6 (using .../cpp-4.8_4.8.1-8_mipsel.deb) ...
+Unpacking replacement cpp-4.8 ...
+Preparing to replace libstdc++-4.8-dev:mipsel 4.8.1-6 (using .../libstdc++-4.8-dev_4.8.1-8_mipsel.deb) ...
+Unpacking replacement libstdc++-4.8-dev:mipsel ...
+Preparing to replace g++-4.8 4.8.1-6 (using .../g++-4.8_4.8.1-8_mipsel.deb) ...
+Unpacking replacement g++-4.8 ...
+Preparing to replace gcc-4.8 4.8.1-6 (using .../gcc-4.8_4.8.1-8_mipsel.deb) ...
+Unpacking replacement gcc-4.8 ...
+Preparing to replace libgcc-4.8-dev:mipsel 4.8.1-6 (using .../libgcc-4.8-dev_4.8.1-8_mipsel.deb) ...
+Unpacking replacement libgcc-4.8-dev:mipsel ...
+Selecting previously unselected package libpipeline1:mipsel.
+Unpacking libpipeline1:mipsel (from .../libpipeline1_1.2.4-1_mipsel.deb) ...
+Selecting previously unselected package libudev0:mipsel.
+Unpacking libudev0:mipsel (from .../libudev0_175-7.2_mipsel.deb) ...
+Selecting previously unselected package groff-base.
+Unpacking groff-base (from .../groff-base_1.22.2-3_mipsel.deb) ...
+Selecting previously unselected package bsdmainutils.
+Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_mipsel.deb) ...
+Selecting previously unselected package man-db.
+Unpacking man-db (from .../man-db_2.6.5-2_mipsel.deb) ...
Selecting previously unselected package libasprintf0c2:mipsel.
-(Reading database ... 11329 files and directories currently installed.)
-Unpacking libasprintf0c2:mipsel (from .../libasprintf0c2_0.18.1.1-10_mipsel.deb) ...
+Unpacking libasprintf0c2:mipsel (from .../libasprintf0c2_0.18.3-1_mipsel.deb) ...
Selecting previously unselected package libmagic1:mipsel.
-Unpacking libmagic1:mipsel (from .../libmagic1_1%3a5.14-1_mipsel.deb) ...
+Unpacking libmagic1:mipsel (from .../libmagic1_1%3a5.14-2_mipsel.deb) ...
Selecting previously unselected package libxml2:mipsel.
-Unpacking libxml2:mipsel (from .../libxml2_2.8.0+dfsg1-7+nmu1_mipsel.deb) ...
+Unpacking libxml2:mipsel (from .../libxml2_2.9.1+dfsg1-2_mipsel.deb) ...
+Selecting previously unselected package libdrm2:mipsel.
+Unpacking libdrm2:mipsel (from .../libdrm2_2.4.45-3_mipsel.deb) ...
+Selecting previously unselected package libglapi-mesa:mipsel.
+Unpacking libglapi-mesa:mipsel (from .../libglapi-mesa_9.1.4-1_mipsel.deb) ...
+Selecting previously unselected package libxau6:mipsel.
+Unpacking libxau6:mipsel (from .../libxau6_1%3a1.0.8-1_mipsel.deb) ...
+Selecting previously unselected package libxdmcp6:mipsel.
+Unpacking libxdmcp6:mipsel (from .../libxdmcp6_1%3a1.1.1-1_mipsel.deb) ...
+Selecting previously unselected package libxcb1:mipsel.
+Unpacking libxcb1:mipsel (from .../libxcb1_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libxcb-dri2-0:mipsel.
+Unpacking libxcb-dri2-0:mipsel (from .../libxcb-dri2-0_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libgbm1:mipsel.
+Unpacking libgbm1:mipsel (from .../libgbm1_9.1.4-1_mipsel.deb) ...
+Selecting previously unselected package libffi6:mipsel.
+Unpacking libffi6:mipsel (from .../libffi6_3.0.13-4_mipsel.deb) ...
+Selecting previously unselected package libwayland-client0:mipsel.
+Unpacking libwayland-client0:mipsel (from .../libwayland-client0_1.1.0-2_mipsel.deb) ...
+Selecting previously unselected package libwayland-server0:mipsel.
+Unpacking libwayland-server0:mipsel (from .../libwayland-server0_1.1.0-2_mipsel.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:mipsel.
+Unpacking libx11-6:mipsel (from .../libx11-6_2%3a1.6.0-1_mipsel.deb) ...
+Selecting previously unselected package libx11-xcb1:mipsel.
+Unpacking libx11-xcb1:mipsel (from .../libx11-xcb1_2%3a1.6.0-1_mipsel.deb) ...
+Selecting previously unselected package libxcb-render0:mipsel.
+Unpacking libxcb-render0:mipsel (from .../libxcb-render0_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libxcb-shape0:mipsel.
+Unpacking libxcb-shape0:mipsel (from .../libxcb-shape0_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libxcb-xfixes0:mipsel.
+Unpacking libxcb-xfixes0:mipsel (from .../libxcb-xfixes0_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libegl1-mesa:mipsel.
+Unpacking libegl1-mesa:mipsel (from .../libegl1-mesa_9.1.4-1_mipsel.deb) ...
Selecting previously unselected package libexpat1:mipsel.
-Unpacking libexpat1:mipsel (from .../libexpat1_2.1.0-3_mipsel.deb) ...
+Unpacking libexpat1:mipsel (from .../libexpat1_2.1.0-4_mipsel.deb) ...
Selecting previously unselected package libfreetype6:mipsel.
Unpacking libfreetype6:mipsel (from .../libfreetype6_2.4.9-1.1_mipsel.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:mipsel.
-Unpacking libfontconfig1:mipsel (from .../libfontconfig1_2.9.0-7.1_mipsel.deb) ...
+Unpacking libfontconfig1:mipsel (from .../libfontconfig1_2.10.2-2_mipsel.deb) ...
+Selecting previously unselected package libxcb-glx0:mipsel.
+Unpacking libxcb-glx0:mipsel (from .../libxcb-glx0_1.9.1-3_mipsel.deb) ...
+Selecting previously unselected package libxfixes3:mipsel.
+Unpacking libxfixes3:mipsel (from .../libxfixes3_1%3a5.0.1-1_mipsel.deb) ...
+Selecting previously unselected package libxdamage1:mipsel.
+Unpacking libxdamage1:mipsel (from .../libxdamage1_1%3a1.1.4-1_mipsel.deb) ...
+Selecting previously unselected package libxext6:mipsel.
+Unpacking libxext6:mipsel (from .../libxext6_2%3a1.3.2-1_mipsel.deb) ...
+Selecting previously unselected package libxxf86vm1:mipsel.
+Unpacking libxxf86vm1:mipsel (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_mipsel.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:mipsel.
+Unpacking libgl1-mesa-glx:mipsel (from .../libgl1-mesa-glx_9.1.4-1_mipsel.deb) ...
Selecting previously unselected package libpixman-1-0:mipsel.
-Unpacking libpixman-1-0:mipsel (from .../libpixman-1-0_0.26.0-4_mipsel.deb) ...
+Unpacking libpixman-1-0:mipsel (from .../libpixman-1-0_0.30.0-3_mipsel.deb) ...
Selecting previously unselected package libpng12-0:mipsel.
Unpacking libpng12-0:mipsel (from .../libpng12-0_1.2.49-4_mipsel.deb) ...
-Selecting previously unselected package libxau6:mipsel.
-Unpacking libxau6:mipsel (from .../libxau6_1%3a1.0.7-1_mipsel.deb) ...
-Selecting previously unselected package libxdmcp6:mipsel.
-Unpacking libxdmcp6:mipsel (from .../libxdmcp6_1%3a1.1.1-1_mipsel.deb) ...
-Selecting previously unselected package libxcb1:mipsel.
-Unpacking libxcb1:mipsel (from .../libxcb1_1.8.1-2_mipsel.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:mipsel.
-Unpacking libx11-6:mipsel (from .../libx11-6_2%3a1.5.0-1_mipsel.deb) ...
-Selecting previously unselected package libxcb-render0:mipsel.
-Unpacking libxcb-render0:mipsel (from .../libxcb-render0_1.8.1-2_mipsel.deb) ...
Selecting previously unselected package libxcb-shm0:mipsel.
-Unpacking libxcb-shm0:mipsel (from .../libxcb-shm0_1.8.1-2_mipsel.deb) ...
-Selecting previously unselected package libxext6:mipsel.
-Unpacking libxext6:mipsel (from .../libxext6_2%3a1.3.1-2_mipsel.deb) ...
+Unpacking libxcb-shm0:mipsel (from .../libxcb-shm0_1.9.1-3_mipsel.deb) ...
Selecting previously unselected package libxrender1:mipsel.
-Unpacking libxrender1:mipsel (from .../libxrender1_1%3a0.9.7-1_mipsel.deb) ...
+Unpacking libxrender1:mipsel (from .../libxrender1_1%3a0.9.8-1_mipsel.deb) ...
Selecting previously unselected package libcairo2:mipsel.
-Unpacking libcairo2:mipsel (from .../libcairo2_1.12.14-4_mipsel.deb) ...
-Selecting previously unselected package libffi6:mipsel.
-Unpacking libffi6:mipsel (from .../libffi6_3.0.13-4_mipsel.deb) ...
+Unpacking libcairo2:mipsel (from .../libcairo2_1.12.14-5_mipsel.deb) ...
Selecting previously unselected package libglib2.0-0:mipsel.
-Unpacking libglib2.0-0:mipsel (from .../libglib2.0-0_2.36.1-2build1_mipsel.deb) ...
+Unpacking libglib2.0-0:mipsel (from .../libglib2.0-0_2.36.3-3_mipsel.deb) ...
Selecting previously unselected package libcroco3:mipsel.
Unpacking libcroco3:mipsel (from .../libcroco3_0.6.8-2_mipsel.deb) ...
Selecting previously unselected package libdatrie1:mipsel.
Unpacking libdatrie1:mipsel (from .../libdatrie1_0.2.6-2_mipsel.deb) ...
-Selecting previously unselected package libunistring0:mipsel.
-Unpacking libunistring0:mipsel (from .../libunistring0_0.9.3-5_mipsel.deb) ...
-Selecting previously unselected package libgettextpo0:mipsel.
-Unpacking libgettextpo0:mipsel (from .../libgettextpo0_0.18.1.1-10_mipsel.deb) ...
-Selecting previously unselected package gcc-4.8-base:mipsel.
-Unpacking gcc-4.8-base:mipsel (from .../gcc-4.8-base_4.8.0-7_mipsel.deb) ...
Selecting previously unselected package libgfortran3:mipsel.
-Unpacking libgfortran3:mipsel (from .../libgfortran3_4.8.0-7_mipsel.deb) ...
+Unpacking libgfortran3:mipsel (from .../libgfortran3_4.8.1-8_mipsel.deb) ...
+Selecting previously unselected package libgraphite2-3:mipsel.
+Unpacking libgraphite2-3:mipsel (from .../libgraphite2-3_1.2.3-1_mipsel.deb) ...
+Selecting previously unselected package libharfbuzz0a:mipsel.
+Unpacking libharfbuzz0a:mipsel (from .../libharfbuzz0a_0.9.19-1_mipsel.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:mipsel.
@@ -393,12 +452,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:mipsel.
Unpacking libthai0:mipsel (from .../libthai0_0.1.19-2_mipsel.deb) ...
-Selecting previously unselected package libxft2:mipsel.
-Unpacking libxft2:mipsel (from .../libxft2_2.3.1-1_mipsel.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_mipsel.deb) ...
-Selecting previously unselected package libpango1.0-0:mipsel.
-Unpacking libpango1.0-0:mipsel (from .../libpango1.0-0_1.30.0-1_mipsel.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_mipsel.deb) ...
+Selecting previously unselected package libpango-1.0-0:mipsel.
+Unpacking libpango-1.0-0:mipsel (from .../libpango-1.0-0_1.32.5-5+b1_mipsel.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:mipsel.
+Unpacking libpangoft2-1.0-0:mipsel (from .../libpangoft2-1.0-0_1.32.5-5+b1_mipsel.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:mipsel.
+Unpacking libpangocairo-1.0-0:mipsel (from .../libpangocairo-1.0-0_1.32.5-5+b1_mipsel.deb) ...
Selecting previously unselected package libpaper1:mipsel.
Unpacking libpaper1:mipsel (from .../libpaper1_1.1.24+nmu2_mipsel.deb) ...
Selecting previously unselected package libpcrecpp0:mipsel.
@@ -408,47 +469,35 @@ Unpacking libsm6:mipsel (from .../libsm6_2%3a1.2.1-2_mipsel.deb) ...
Selecting previously unselected package libjbig0:mipsel.
Unpacking libjbig0:mipsel (from .../libjbig0_2.0-2_mipsel.deb) ...
Selecting previously unselected package libtiff5:mipsel.
-Unpacking libtiff5:mipsel (from .../libtiff5_4.0.2-6_mipsel.deb) ...
+Unpacking libtiff5:mipsel (from .../libtiff5_4.0.3-1_mipsel.deb) ...
+Selecting previously unselected package libunistring0:mipsel.
+Unpacking libunistring0:mipsel (from .../libunistring0_0.9.3-5_mipsel.deb) ...
+Selecting previously unselected package libxft2:mipsel.
+Unpacking libxft2:mipsel (from .../libxft2_2.3.1-1_mipsel.deb) ...
Selecting previously unselected package libxss1:mipsel.
Unpacking libxss1:mipsel (from .../libxss1_1%3a1.2.2-1_mipsel.deb) ...
Selecting previously unselected package libxt6:mipsel.
-Unpacking libxt6:mipsel (from .../libxt6_1%3a1.1.3-1_mipsel.deb) ...
-Selecting previously unselected package libmpc3:mipsel.
-Unpacking libmpc3:mipsel (from .../libmpc3_1.0.1-1_mipsel.deb) ...
+Unpacking libxt6:mipsel (from .../libxt6_1%3a1.1.3-1+deb7u1_mipsel.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_mipsel.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_mipsel.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_mipsel.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_mipsel.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Preparing to replace libstdc++6-4.6-dev 4.6.3-15 (using .../libstdc++6-4.6-dev_4.6.4-2_mipsel.deb) ...
-Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.3-15 (using .../g++-4.6_4.6.4-2_mipsel.deb) ...
-Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.3-15 (using .../gcc-4.6_4.6.4-2_mipsel.deb) ...
-Unpacking replacement gcc-4.6 ...
-Preparing to replace cpp-4.6 4.6.3-15 (using .../cpp-4.6_4.6.4-2_mipsel.deb) ...
-Unpacking replacement cpp-4.6 ...
-Preparing to replace gcc-4.6-base:mipsel 4.6.3-15 (using .../gcc-4.6-base_4.6.4-2_mipsel.deb) ...
-Unpacking replacement gcc-4.6-base:mipsel ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_mipsel.deb) ...
-Selecting previously unselected package libasprintf-dev:mipsel.
-Unpacking libasprintf-dev:mipsel (from .../libasprintf-dev_0.18.1.1-10_mipsel.deb) ...
-Selecting previously unselected package libgettextpo-dev:mipsel.
-Unpacking libgettextpo-dev:mipsel (from .../libgettextpo-dev_0.18.1.1-10_mipsel.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_mipsel.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_mipsel.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
-Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_mipsel.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Selecting previously unselected package libgfortran-4.8-dev:mipsel.
+Unpacking libgfortran-4.8-dev:mipsel (from .../libgfortran-4.8-dev_4.8.1-8_mipsel.deb) ...
+Selecting previously unselected package gfortran-4.8.
+Unpacking gfortran-4.8 (from .../gfortran-4.8_4.8.1-8_mipsel.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_mipsel.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.8.1-2_mipsel.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_mipsel.deb) ...
Selecting previously unselected package libblas-dev.
@@ -462,9 +511,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_mipsel.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_mipsel.deb) ...
Selecting previously unselected package libtinfo-dev:mipsel.
-Unpacking libtinfo-dev:mipsel (from .../libtinfo-dev_5.9+20130504-1_mipsel.deb) ...
+Unpacking libtinfo-dev:mipsel (from .../libtinfo-dev_5.9+20130608-1_mipsel.deb) ...
Selecting previously unselected package libncurses5-dev:mipsel.
-Unpacking libncurses5-dev:mipsel (from .../libncurses5-dev_5.9+20130504-1_mipsel.deb) ...
+Unpacking libncurses5-dev:mipsel (from .../libncurses5-dev_5.9+20130608-1_mipsel.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_mipsel.deb) ...
Selecting previously unselected package libpcre3-dev:mipsel.
@@ -484,45 +533,75 @@ Unpacking unzip (from .../unzip_6.0-9_mipsel.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_mipsel.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_mipsel.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_mipsel.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_mipsel.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1~20130512-1_mipsel.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_mipsel.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1~20130512-1_all.deb) ...
-Processing triggers for man-db ...
-Setting up libasprintf0c2:mipsel (0.18.1.1-10) ...
-Setting up libmagic1:mipsel (1:5.14-1) ...
-Setting up libxml2:mipsel (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:mipsel (2.1.0-3) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:mipsel (4.8.1-8) ...
+Setting up libatomic1:mipsel (4.8.1-8) ...
+Setting up cpp-4.8 (4.8.1-8) ...
+Setting up libgcc-4.8-dev:mipsel (4.8.1-8) ...
+Setting up libstdc++-4.8-dev:mipsel (4.8.1-8) ...
+Setting up gcc-4.8 (4.8.1-8) ...
+Setting up g++-4.8 (4.8.1-8) ...
+Setting up libpipeline1:mipsel (1.2.4-1) ...
+Setting up libudev0:mipsel (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
+Setting up bsdmainutils (9.0.5) ...
+update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
+update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
+Setting up man-db (2.6.5-2) ...
+Not building database; man-db/auto-update is not 'true'.
+Setting up libasprintf0c2:mipsel (0.18.3-1) ...
+Setting up libmagic1:mipsel (1:5.14-2) ...
+Setting up libxml2:mipsel (2.9.1+dfsg1-2) ...
+Setting up libdrm2:mipsel (2.4.45-3) ...
+Setting up libglapi-mesa:mipsel (9.1.4-1) ...
+Setting up libxau6:mipsel (1:1.0.8-1) ...
+Setting up libxdmcp6:mipsel (1:1.1.1-1) ...
+Setting up libxcb1:mipsel (1.9.1-3) ...
+Setting up libxcb-dri2-0:mipsel (1.9.1-3) ...
+Setting up libgbm1:mipsel (9.1.4-1) ...
+Setting up libffi6:mipsel (3.0.13-4) ...
+Setting up libwayland-client0:mipsel (1.1.0-2) ...
+Setting up libwayland-server0:mipsel (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:mipsel (2:1.6.0-1) ...
+Setting up libx11-xcb1:mipsel (2:1.6.0-1) ...
+Setting up libxcb-render0:mipsel (1.9.1-3) ...
+Setting up libxcb-shape0:mipsel (1.9.1-3) ...
+Setting up libxcb-xfixes0:mipsel (1.9.1-3) ...
+Setting up libegl1-mesa:mipsel (9.1.4-1) ...
+Setting up libexpat1:mipsel (2.1.0-4) ...
Setting up libfreetype6:mipsel (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:mipsel (2.9.0-7.1) ...
-Setting up libpixman-1-0:mipsel (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:mipsel (2.10.2-2) ...
+Setting up libxcb-glx0:mipsel (1.9.1-3) ...
+Setting up libxfixes3:mipsel (1:5.0.1-1) ...
+Setting up libxdamage1:mipsel (1:1.1.4-1) ...
+Setting up libxext6:mipsel (2:1.3.2-1) ...
+Setting up libxxf86vm1:mipsel (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:mipsel (9.1.4-1) ...
+Setting up libpixman-1-0:mipsel (0.30.0-3) ...
Setting up libpng12-0:mipsel (1.2.49-4) ...
-Setting up libxau6:mipsel (1:1.0.7-1) ...
-Setting up libxdmcp6:mipsel (1:1.1.1-1) ...
-Setting up libxcb1:mipsel (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:mipsel (2:1.5.0-1) ...
-Setting up libxcb-render0:mipsel (1.8.1-2) ...
-Setting up libxcb-shm0:mipsel (1.8.1-2) ...
-Setting up libxext6:mipsel (2:1.3.1-2) ...
-Setting up libxrender1:mipsel (1:0.9.7-1) ...
-Setting up libcairo2:mipsel (1.12.14-4) ...
-Setting up libffi6:mipsel (3.0.13-4) ...
-Setting up libglib2.0-0:mipsel (2.36.1-2build1) ...
+Setting up libxcb-shm0:mipsel (1.9.1-3) ...
+Setting up libxrender1:mipsel (1:0.9.8-1) ...
+Setting up libcairo2:mipsel (1.12.14-5) ...
+Setting up libglib2.0-0:mipsel (2.36.3-3) ...
No schema files found: doing nothing.
Setting up libcroco3:mipsel (0.6.8-2) ...
Setting up libdatrie1:mipsel (0.2.6-2) ...
-Setting up libunistring0:mipsel (0.9.3-5) ...
-Setting up libgettextpo0:mipsel (0.18.1.1-10) ...
-Setting up gcc-4.8-base:mipsel (4.8.0-7) ...
-Setting up libgfortran3:mipsel (4.8.0-7) ...
+Setting up libgfortran3:mipsel (4.8.1-8) ...
+Setting up libgraphite2-3:mipsel (1.2.3-1) ...
+Setting up libharfbuzz0a:mipsel (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
@@ -530,35 +609,32 @@ Setting up libice6:mipsel (2:1.0.8-2) ...
Setting up libjpeg8:mipsel (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:mipsel (0.1.19-2) ...
-Setting up libxft2:mipsel (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:mipsel (1.30.0-1) ...
+Setting up libpango-1.0-0:mipsel (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:mipsel (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:mipsel (1.32.5-5+b1) ...
Setting up libpaper1:mipsel (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:mipsel (1:8.31-2) ...
Setting up libsm6:mipsel (2:1.2.1-2) ...
Setting up libjbig0:mipsel (2.0-2) ...
-Setting up libtiff5:mipsel (4.0.2-6) ...
+Setting up libtiff5:mipsel (4.0.3-1) ...
+Setting up libunistring0:mipsel (0.9.3-5) ...
+Setting up libxft2:mipsel (2.3.1-1) ...
Setting up libxss1:mipsel (1:1.2.2-1) ...
-Setting up libxt6:mipsel (1:1.1.3-1) ...
-Setting up libmpc3:mipsel (1.0.1-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up gcc-4.6-base:mipsel (4.6.4-2) ...
-Setting up cpp-4.6 (4.6.4-2) ...
-Setting up gcc-4.6 (4.6.4-2) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libasprintf-dev:mipsel (0.18.1.1-10) ...
-Setting up libgettextpo-dev:mipsel (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:mipsel (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up libgfortran-4.8-dev:mipsel (4.8.1-8) ...
+Setting up gfortran-4.8 (4.8.1-8) ...
+Setting up gfortran (4:4.8.1-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -570,8 +646,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:mipsel (5.9+20130504-1) ...
-Setting up libncurses5-dev:mipsel (5.9+20130504-1) ...
+Setting up libtinfo-dev:mipsel (5.9+20130608-1) ...
+Setting up libncurses5-dev:mipsel (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:mipsel (1:8.31-2) ...
Setting up zlib1g-dev:mipsel (1:1.2.8.dfsg-1) ...
@@ -581,25 +657,24 @@ Setting up libreadline-dev:mipsel (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1~20130512-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1~20130512-1) ...
-Setting up g++-4.6 (4.6.4-2) ...
-Setting up libstdc++6-4.6-dev (4.6.4-2) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 39 not upgraded.
-Checking correctness of dependencies...
-Kernel: Linux 2.6.39-3-loongson-2e mipsel (mips64)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6-dev_2.13-38 libstdc++6_4.7.2-5 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.2.39-2
-Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-0.1 binutils_2.22-8 bsdmainutils_9.0.4 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.20-3 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 debconf_1.5.49 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1:5.14-1 findutils_4.4.2-5 font [...]
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
+Processing triggers for libc-bin ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: Linux 3.2.0-4-sb1-bcm91250a mipsel (mips64)
+Toolchain package versions: binutils_2.23.52.20130620-1 dpkg-dev_1.16.10 g++-4.8_4.8.1-8 gcc-4.8_4.8.1-8 libc6-dev_2.17-7 libstdc++-4.8-dev_4.8.1-8 libstdc++6_4.8.1-8 linux-libc-dev_3.9.8-1
+Package versions: apt_0.9.9.1 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130620-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.20-3 cpp_4:4.8.1-2 cpp-4.8_4.8.1-8 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.19-2 file_1:5.14-2 findutils_4.4. [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -609,28 +684,46 @@ Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-0.
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+DEB_BUILD_OPTIONS=parallel=2
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-mipsel-sbuild
+SCHROOT_CHROOT_NAME=sid-mipsel-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-mipsel-sbuild-57236218-19ca-49c8-b8dc-fb48470ccd04
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture mipsel
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -646,7 +739,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -665,26 +758,28 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1~20130512-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g0 -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
+ double abstol = -1e500; // infinity
+ ^
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -694,13 +789,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limm
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -708,7 +803,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -744,9 +839,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -776,79 +871,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_mipsel.deb'.
- dpkg-genchanges -B -mmipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_mipsel.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_mipsel.deb'.
+ dpkg-genchanges -B -mmipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_mipsel.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1831
+Build finished at 20130804-1015
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_mipsel.changes:
+──────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_mipsel.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: mipsel
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: mipsel Build Daemon (eysler) <buildd_mipsel-eysler at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: mipsel Build Daemon (rem) <buildd_mipsel-rem at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
- .
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- f474bb4af7bd722d3dcb86a4395437cd76d853a0 1618156 r-bioc-limma_3.16.3~dfsg-1_mipsel.deb
+ e707b861e204dcbdc1fd07b974ffc36e40fefd59 863432 r-bioc-limma_3.16.7~dfsg-1_mipsel.deb
Checksums-Sha256:
- 069965fbe8f452bb699604f5a07c1f882ea0e1e0391dc2fcd07ceb95fb51376b 1618156 r-bioc-limma_3.16.3~dfsg-1_mipsel.deb
+ ba3b798ac2bd96a081f308e1ec5e2faf15b0cf3990fb927b3b358c465123a74d 863432 r-bioc-limma_3.16.7~dfsg-1_mipsel.deb
Files:
- af1f5e65629acc4e07863f7193a399f4 1618156 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_mipsel.deb
+ 83bfa45472970c83846cceea6b62d83e 863432 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_mipsel.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_mipsel.deb
+r-bioc-limma_3.16.7~dfsg-1_mipsel.deb
─────────────────────────────────────
new debian package, version 2.0.
- size 1618156 bytes: control archive= 1678 bytes.
- 783 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ size 863432 bytes: control archive=1629 bytes.
+ 774 bytes, 16 lines control
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: mipsel
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1847
- Depends: libc6 (>= 2.2), r-base-core (>= 3.0.1~20130512-1)
+ Installed-Size: 1070
+ Depends: libc6 (>= 2.2), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -860,90 +952,91 @@ r-bioc-limma_3.16.3~dfsg-1_mipsel.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-17 18:31 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
-drwxr-xr-x root/root 0 2013-05-17 18:31 ./usr/share/doc/r-bioc-limma/tests/
--rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 10:14 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 10:14 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 992 2013-08-04 10:14 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 963 2013-08-04 10:14 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 219 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 3098 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 1072 2013-08-04 10:14 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 542 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 5952 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 6386 2013-08-04 10:15 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 11214 2013-08-04 10:14 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2013-08-04 10:14 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2013-08-04 10:14 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 37564 2013-08-04 10:14 ./usr/lib/R/site-library/limma/html/00Index.html
+drwxr-xr-x root/root 0 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 3441 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 1394 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 6742 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 2577 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 492594 2013-08-04 10:14 ./usr/lib/R/site-library/limma/help/limma.rdb
+drwxr-xr-x root/root 0 2013-08-04 10:14 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 4128 2013-08-04 10:14 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 1056 2013-08-04 10:14 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 207873 2013-08-04 10:14 ./usr/lib/R/site-library/limma/R/limma.rdb
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 45597 2013-08-04 10:14 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 104280 2013-08-04 10:14 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 673 2013-08-04 10:14 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 1711 2013-08-04 10:14 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 20708 2013-08-04 10:15 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 2095 2013-08-04 10:14 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 10085 2013-08-04 10:15 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2013-08-04 10:15 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
-drwxr-xr-x root/root 0 2013-05-17 18:29 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 18:29 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/limma/
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 494649 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 1406 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 2567 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 3403 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 6703 2013-05-17 18:30 ./usr/lib/R/site-library/limma/help/AnIndex
-drwxr-xr-x root/root 0 2013-05-17 18:29 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 1056 2013-05-17 18:29 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 206554 2013-05-17 18:29 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 4116 2013-05-17 18:29 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 963 2013-05-17 18:29 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 10085 2013-05-17 18:30 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 102936 2013-05-17 18:29 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 45597 2013-05-17 18:29 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 673 2013-05-17 18:29 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 1711 2013-05-17 18:29 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 806089 2013-05-17 18:29 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2013-05-17 18:30 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 37337 2013-05-17 18:30 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 992 2013-05-17 18:29 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 541 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 219 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 3089 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 5944 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 1072 2013-05-17 18:29 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6375 2013-05-17 18:30 ./usr/lib/R/site-library/limma/Meta/Rd.rds
-drwxr-xr-x root/root 0 2013-05-17 18:31 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10704 2013-05-17 18:31 ./usr/lib/R/site-library/limma/libs/limma.so
--rw-r--r-- root/root 2046 2013-05-17 18:29 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 11214 2013-05-17 18:29 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-mipsel-sbuild-10ee009b-bf9f-41cc-8ef1-e3fdfcc5afaa/build/buildd-r-bioc-limma_3.16.3~dfsg-1-mipsel-rgDx7S
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: mipsel
-Build-Space: 5888
-Build-Time: 132
+Build Architecture: mipsel
+Build-Space: 3576
+Build-Time: 113
Distribution: sid
-Install-Time: 284
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: mipsel
+Install-Time: 332
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: mipsel
Package: r-bioc-limma
-Package-Time: 563
-Source-Version: 3.16.3~dfsg-1
-Space: 5888
+Package-Time: 551
+Source-Version: 3.16.7~dfsg-1
+Space: 3576
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1831
-Build needed 00:09:23, 5888k disc space
-Signature with key '6EE6C7C2' requested:
+Finished at 20130804-1015
+Build needed 00:09:11, 3576k disc space
+Signature with key 'B1DFE6AC' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_mipsel.changes B1DFE6AC
+Successfully signed changes file
diff --git a/powerpc.log b/powerpc.log
index 661e822..4cae9f8 100644
--- a/powerpc.log
+++ b/powerpc.log
@@ -1,63 +1,75 @@
-From buildd at praetorius.debian.org Thu May 16 15:40:37 2013
-Return-path: <buildd at praetorius.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at poulenc.debian.org Sun Aug 04 09:36:43 2013
+Return-path: <buildd at poulenc.debian.org>
+Received: from muffat.debian.org ([206.12.19.146])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
- by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at praetorius.debian.org>)
- id 1Ud0IG-00044J-P2
- for logs at buildd.debian.org; Thu, 16 May 2013 15:40:37 +0000
-Received: from [2001:6b0:e:2a18:214:5eff:fe97:268a]
- (helo=praetorius.debian.org)
+ CN=muffat.debian.org, EMAIL=hostmaster at muffat.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
+ (Exim 4.72) (envelope-from <buildd at poulenc.debian.org>)
+ id 1V5ujy-0000jI-Pl
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 09:36:43 +0000
+Received: from poulenc.ynic.york.ac.uk ([144.32.168.77]
+ helo=poulenc.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=praetorius.debian.org,
- EMAIL=hostmaster at praetorius.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at praetorius.debian.org>)
- id 1Ud0IF-00071g-NV; Thu, 16 May 2013 15:40:36 +0000
-Received: from buildd by praetorius.debian.org with local (Exim 4.72)
- (envelope-from <buildd at praetorius.debian.org>)
- id 1Ud0Ht-0004KF-Tu; Thu, 16 May 2013 15:40:13 +0000
-Date: Thu, 16 May 2013 15:40:13 +0000
-Message-Id: <E1Ud0Ht-0004KF-Tu at praetorius.debian.org>
-From: buildd on praetorius <buildd at praetorius.debian.org>
-To: wouter at debian.org,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on powerpc
+ CN=poulenc.debian.org, EMAIL=hostmaster at poulenc.debian.org (verified)
+ by muffat.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
+ (Exim 4.80) (envelope-from <buildd at poulenc.debian.org>)
+ id 1V5ujv-0000o8-UC; Sun, 04 Aug 2013 09:36:40 +0000
+Received: from buildd by poulenc.debian.org with local (Exim 4.80)
+ (envelope-from <buildd at poulenc.debian.org>)
+ id 1V5ujt-0005Zc-Gk; Sun, 04 Aug 2013 09:36:37 +0000
+Content-Transfer-Encoding: binary
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 09:36:37 +0000
+From: buildd on poulenc <buildd at poulenc.debian.org>
+To: phil+buildd at philkern.de,logs at buildd.debian.org
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on powerpc
(dist=sid)
-Content-Type: text/plain; charset=UTF-8
-Content-Transfer-Encoding: 8bit
+Key-Id: C5E51171
+Message-Id: <E1V5ujt-0005Zc-Gk at poulenc.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on praetorius.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on poulenc.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (powerpc) 16 May 2013 15:35 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (powerpc) 04 Aug 2013 09:32 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: powerpc
-Get:1 http://ftp.se.debian.org unstable InRelease [205 kB]
-Get:2 http://ftp.se.debian.org unstable/main Sources [6710 kB]
-Get:3 http://incoming.debian.org unstable InRelease [205 kB]
-Get:4 http://ftp.se.debian.org unstable/contrib Sources [53.3 kB]
-Get:5 http://ftp.se.debian.org unstable/non-free Sources [103 kB]
-Get:6 http://ftp.se.debian.org unstable/main powerpc Packages [6296 kB]
-Get:7 http://incoming.debian.org buildd-unstable InRelease [111 kB]
-Get:8 http://incoming.debian.org unstable/main Sources [6728 kB]
-Get:9 http://ftp.se.debian.org unstable/contrib powerpc Packages [37.1 kB]
-Get:10 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:11 http://incoming.debian.org unstable/non-free Sources [102 kB]
-Get:12 http://incoming.debian.org unstable/main powerpc Packages [6284 kB]
-Get:13 http://incoming.debian.org unstable/contrib powerpc Packages [37.1 kB]
-Get:14 http://incoming.debian.org buildd-unstable/main Sources [119 kB]
-Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [2481 B]
-Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2167 B]
-Get:17 http://incoming.debian.org buildd-unstable/main powerpc Packages [76.3 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib powerpc Packages [1481 B]
-Fetched 27.1 MB in 22s (1190 kB/s)
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: powerpc
+Host Architecture: powerpc
+Build Architecture: powerpc
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-BAEpvK/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-BAEpvK' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-powerpc-sbuild-3255047d-6f8f-4b85-bd34-1b58f5a4e6d9' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://ftp.uk.debian.org unstable InRelease [204 kB]
+Get:2 http://incoming.debian.org unstable InRelease [204 kB]
+Get:3 http://ftp.uk.debian.org unstable/main Sources [6890 kB]
+Get:4 http://incoming.debian.org buildd-unstable InRelease [111 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:6 http://ftp.uk.debian.org unstable/contrib Sources [55.4 kB]
+Get:7 http://ftp.uk.debian.org unstable/non-free Sources [105 kB]
+Get:8 http://ftp.uk.debian.org unstable/main powerpc Packages [6342 kB]
+Get:9 http://ftp.uk.debian.org unstable/contrib powerpc Packages [37.6 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:12 http://incoming.debian.org unstable/main powerpc Packages [6342 kB]
+Get:13 http://incoming.debian.org unstable/contrib powerpc Packages [37.6 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [100 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2467 B]
+Get:17 http://incoming.debian.org buildd-unstable/main powerpc Packages [113 kB]
+Get:18 http://incoming.debian.org buildd-unstable/contrib powerpc Packages [14 B]
+Fetched 27.6 MB in 29s (944 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -77,360 +89,351 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 2s (441 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (200 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-2KzmiD/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.5)
-fakeroot: already installed (1.18.4-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 69 not upgraded.
-Removing negative dependencies:
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 38 not upgraded.
+Need to get 0 B/710 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 10892 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-mcbxzy/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 69 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, ncurses-base, ncurses-bin, perl-base, sed, login, sysvinit-utils, sysvinit, tar, bsdutils, mount, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.1)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2-5.1)
-coreutils: already installed (8.13-3.2)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-7)
-dpkg: already installed (1.16.9)
-e2fsprogs: already installed (1.42.5-1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-16)
-sed: already installed (4.2.1-10)
-login: already installed (1:4.1.5.1-1)
-sysvinit-utils: already installed (2.88dsf-35)
-sysvinit: already installed (2.88dsf-35)
-tar: already installed (1.26-4)
-bsdutils: already installed (1:2.20.1-5.3)
-mount: already installed (2.20.1-5.3)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (2.13-37)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.9 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130509
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils cpp-4.6 file fontconfig fontconfig-config fonts-dejavu-core
- g++-4.6 gcc-4.6 gcc-4.6-base gcc-4.8-base gettext gettext-base gfortran
- gfortran-4.6 groff-base html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6 libc6-dev
- libcairo2 libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1 libfreetype6
- libgettextpo-dev libgettextpo0 libgfortran3 libglib2.0-0 libice6 libjbig0
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libmpc3 libmpfr4
- libncurses5 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3
- libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6 libreadline6-dev libsm6 libstdc++6-4.6-dev
- libthai-data libthai0 libtiff5 libtinfo-dev libtinfo5 libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf
- r-base-core tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
- zlib1g zlib1g-dev
+ bsdmainutils cdbs cpp debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core gcc gcc-4.8-base gettext gettext-base gfortran
+ gfortran-4.6 groff-base intltool-debian libasprintf0c2 libblas-dev libblas3
+ libbz2-dev libcairo2 libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1
+ libffi6 libfontconfig1 libfreetype6 libgbm1 libgcc1 libgfortran3
+ libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgomp1 libgraphite2-3
+ libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev
+ liblapack3 libmagic1 libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0
+ libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev libpcrecpp0
+ libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
+ libreadline6-dev libsm6 libstdc++6 libthai-data libthai0 libtiff5
+ libtinfo-dev libudev0 libunistring0 libwayland-client0 libwayland-server0
+ libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0
+ libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1
+ libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6
+ libxxf86vm1 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5
+ ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make
- g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-4.6-multilib
- libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg libquadmath-dbg libmudflap0-dbg
- libcloog-ppl0 libppl-c2 libppl7 binutils-gold gettext-doc gfortran-multilib
- gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff
- glibc-doc ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp
- ttf-arphic-gkai00mp ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser
+ wamerican wordlist whois vacation devscripts cpp-doc dh-make gcc-multilib
+ manpages-dev autoconf automake1.9 libtool flex bison gdb gcc-doc gettext-doc
+ gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc
+ libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
+ ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint manpages-dev libglib2.0-data
- shared-mime-info libgpm2 xml-core libmail-sendmail-perl r-recommended
- r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
- fonts-dejavu-core gcc-4.8-base gettext gettext-base gfortran gfortran-4.6
- groff-base html2text intltool-debian libasprintf-dev libasprintf0c2
- libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi6 libfontconfig1 libfreetype6 libgettextpo-dev libgettextpo0
- libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
- zlib1g-dev
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.6 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0
+ libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
+ libtinfo-dev libudev0 libunistring0 libwayland-client0 libwayland-server0
+ libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0
+ libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1
+ libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6
+ libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-dev-bin libc6 libc6-dev libmpfr4
- libncurses5 libreadline6 libstdc++6-4.6-dev libtinfo5 ncurses-bin zlib1g
-14 upgraded, 84 newly installed, 0 to remove and 55 not upgraded.
-Need to get 84.5 MB of archives.
-After this operation, 119 MB of additional disk space will be used.
-Get:1 http://ftp.se.debian.org/debian/ unstable/main libc6-dev powerpc 2.17-2 [2955 kB]
-Get:2 http://incoming.debian.org/debian/ unstable/main r-base-core powerpc 3.0.1-1 [21.4 MB]
-Get:3 http://ftp.se.debian.org/debian/ unstable/main libc-dev-bin powerpc 2.17-2 [231 kB]
-Get:4 http://ftp.se.debian.org/debian/ unstable/main libc6 powerpc 2.17-2 [4479 kB]
-Get:5 http://ftp.se.debian.org/debian/ unstable/main libtinfo5 powerpc 5.9+20130504-1 [293 kB]
-Get:6 http://ftp.se.debian.org/debian/ unstable/main libncurses5 powerpc 5.9+20130504-1 [105 kB]
-Get:7 http://ftp.se.debian.org/debian/ unstable/main ncurses-bin powerpc 5.9+20130504-1 [359 kB]
-Get:8 http://ftp.se.debian.org/debian/ unstable/main libreadline6 powerpc 6.2+dfsg-0.1 [154 kB]
-Get:9 http://ftp.se.debian.org/debian/ unstable/main zlib1g powerpc 1:1.2.8.dfsg-1 [88.3 kB]
-Get:10 http://ftp.se.debian.org/debian/ unstable/main libpipeline1 powerpc 1.2.3-1 [39.5 kB]
-Get:11 http://ftp.se.debian.org/debian/ unstable/main groff-base powerpc 1.22.2-2 [727 kB]
-Get:12 http://ftp.se.debian.org/debian/ unstable/main bsdmainutils powerpc 9.0.5 [211 kB]
-Get:13 http://ftp.se.debian.org/debian/ unstable/main man-db powerpc 2.6.3-6 [873 kB]
-Get:14 http://ftp.se.debian.org/debian/ unstable/main libasprintf0c2 powerpc 0.18.1.1-10 [27.4 kB]
-Get:15 http://ftp.se.debian.org/debian/ unstable/main libmagic1 powerpc 1:5.14-1 [215 kB]
-Get:16 http://ftp.se.debian.org/debian/ unstable/main libpcre3 powerpc 1:8.31-2 [246 kB]
-Get:17 http://ftp.se.debian.org/debian/ unstable/main libxml2 powerpc 2.8.0+dfsg1-7+nmu1 [852 kB]
-Get:18 http://ftp.se.debian.org/debian/ unstable/main libexpat1 powerpc 2.1.0-3 [143 kB]
-Get:19 http://ftp.se.debian.org/debian/ unstable/main libfreetype6 powerpc 2.4.9-1.1 [431 kB]
-Get:20 http://ftp.se.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:21 http://ftp.se.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:22 http://ftp.se.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:23 http://ftp.se.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:24 http://ftp.se.debian.org/debian/ unstable/main libfontconfig1 powerpc 2.9.0-7.1 [297 kB]
-Get:25 http://ftp.se.debian.org/debian/ unstable/main libpixman-1-0 powerpc 0.26.0-4 [384 kB]
-Get:26 http://ftp.se.debian.org/debian/ unstable/main libpng12-0 powerpc 1.2.49-4 [186 kB]
-Get:27 http://ftp.se.debian.org/debian/ unstable/main libxau6 powerpc 1:1.0.7-1 [18.5 kB]
-Get:28 http://ftp.se.debian.org/debian/ unstable/main libxdmcp6 powerpc 1:1.1.1-1 [25.9 kB]
-Get:29 http://ftp.se.debian.org/debian/ unstable/main libxcb1 powerpc 1.8.1-2 [45.7 kB]
-Get:30 http://ftp.se.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:31 http://ftp.se.debian.org/debian/ unstable/main libx11-6 powerpc 2:1.5.0-1 [880 kB]
-Get:32 http://ftp.se.debian.org/debian/ unstable/main libxcb-render0 powerpc 1.8.1-2 [17.4 kB]
-Get:33 http://ftp.se.debian.org/debian/ unstable/main libxcb-shm0 powerpc 1.8.1-2 [10.3 kB]
-Get:34 http://ftp.se.debian.org/debian/ unstable/main libxext6 powerpc 2:1.3.1-2 [52.1 kB]
-Get:35 http://ftp.se.debian.org/debian/ unstable/main libxrender1 powerpc 1:0.9.7-1 [31.6 kB]
-Get:36 http://ftp.se.debian.org/debian/ unstable/main libcairo2 powerpc 1.12.14-4 [993 kB]
-Get:37 http://ftp.se.debian.org/debian/ unstable/main libffi6 powerpc 3.0.13-4 [22.3 kB]
-Get:38 http://ftp.se.debian.org/debian/ unstable/main libglib2.0-0 powerpc 2.36.1-2build1 [1922 kB]
-Get:39 http://ftp.se.debian.org/debian/ unstable/main libcroco3 powerpc 0.6.6-2 [121 kB]
-Get:40 http://ftp.se.debian.org/debian/ unstable/main libdatrie1 powerpc 0.2.6-2 [28.8 kB]
-Get:41 http://ftp.se.debian.org/debian/ unstable/main libunistring0 powerpc 0.9.3-5 [421 kB]
-Get:42 http://ftp.se.debian.org/debian/ unstable/main libgettextpo0 powerpc 0.18.1.1-10 [138 kB]
-Get:43 http://ftp.se.debian.org/debian/ unstable/main gcc-4.8-base powerpc 4.8.0-7 [148 kB]
-Get:44 http://ftp.se.debian.org/debian/ unstable/main libgfortran3 powerpc 4.8.0-7 [278 kB]
-Get:45 http://ftp.se.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:46 http://ftp.se.debian.org/debian/ unstable/main libice6 powerpc 2:1.0.8-2 [59.7 kB]
-Get:47 http://ftp.se.debian.org/debian/ unstable/main libjpeg8 powerpc 8d-1 [130 kB]
-Get:48 http://ftp.se.debian.org/debian/ unstable/main libmpfr4 powerpc 3.1.1-1 [553 kB]
-Get:49 http://ftp.se.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:50 http://ftp.se.debian.org/debian/ unstable/main libthai0 powerpc 0.1.19-2 [41.9 kB]
-Get:51 http://ftp.se.debian.org/debian/ unstable/main libxft2 powerpc 2.3.1-1 [60.6 kB]
-Get:52 http://ftp.se.debian.org/debian/ unstable/main fontconfig powerpc 2.9.0-7.1 [347 kB]
-Get:53 http://ftp.se.debian.org/debian/ unstable/main libpango1.0-0 powerpc 1.30.0-1 [451 kB]
-Get:54 http://ftp.se.debian.org/debian/ unstable/main libpaper1 powerpc 1.1.24+nmu2 [21.7 kB]
-Get:55 http://ftp.se.debian.org/debian/ unstable/main libpcrecpp0 powerpc 1:8.31-2 [129 kB]
-Get:56 http://ftp.se.debian.org/debian/ unstable/main libsm6 powerpc 2:1.2.1-2 [33.2 kB]
-Get:57 http://ftp.se.debian.org/debian/ unstable/main libjbig0 powerpc 2.0-2 [31.9 kB]
-Get:58 http://ftp.se.debian.org/debian/ unstable/main libtiff5 powerpc 4.0.2-6 [238 kB]
-Get:59 http://ftp.se.debian.org/debian/ unstable/main libxss1 powerpc 1:1.2.2-1 [17.3 kB]
-Get:60 http://ftp.se.debian.org/debian/ unstable/main libxt6 powerpc 1:1.1.3-1 [196 kB]
-Get:61 http://ftp.se.debian.org/debian/ unstable/main libmpc3 powerpc 1.0.1-1 [44.7 kB]
-Get:62 http://ftp.se.debian.org/debian/ unstable/main file powerpc 1:5.14-1 [54.1 kB]
-Get:63 http://ftp.se.debian.org/debian/ unstable/main gettext-base powerpc 0.18.1.1-10 [130 kB]
-Get:64 http://ftp.se.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:65 http://ftp.se.debian.org/debian/ unstable/main libstdc++6-4.6-dev powerpc 4.6.4-2 [1699 kB]
-Get:66 http://incoming.debian.org/debian/ unstable/main r-base-dev all 3.0.1-1 [3896 B]
-Get:67 http://ftp.se.debian.org/debian/ unstable/main g++-4.6 powerpc 4.6.4-2 [6599 kB]
-Get:68 http://ftp.se.debian.org/debian/ unstable/main gcc-4.6 powerpc 4.6.4-2 [4885 kB]
-Get:69 http://ftp.se.debian.org/debian/ unstable/main cpp-4.6 powerpc 4.6.4-2 [4537 kB]
-Get:70 http://ftp.se.debian.org/debian/ unstable/main gcc-4.6-base powerpc 4.6.4-2 [143 kB]
-Get:71 http://ftp.se.debian.org/debian/ unstable/main html2text powerpc 1.3.2a-15 [105 kB]
-Get:72 http://ftp.se.debian.org/debian/ unstable/main libasprintf-dev powerpc 0.18.1.1-10 [26.9 kB]
-Get:73 http://ftp.se.debian.org/debian/ unstable/main libgettextpo-dev powerpc 0.18.1.1-10 [184 kB]
-Get:74 http://ftp.se.debian.org/debian/ unstable/main gettext powerpc 0.18.1.1-10 [1766 kB]
-Get:75 http://ftp.se.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:76 http://ftp.se.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:77 http://ftp.se.debian.org/debian/ unstable/main debhelper all 9.20130509 [707 kB]
-Get:78 http://ftp.se.debian.org/debian/ unstable/main gfortran-4.6 powerpc 4.6.4-2 [5190 kB]
-Get:79 http://ftp.se.debian.org/debian/ unstable/main gfortran powerpc 4:4.6.3-8 [1136 B]
-Get:80 http://ftp.se.debian.org/debian/ unstable/main libblas3 powerpc 1.2.20110419-5 [192 kB]
-Get:81 http://ftp.se.debian.org/debian/ unstable/main libblas-dev powerpc 1.2.20110419-5 [204 kB]
-Get:82 http://ftp.se.debian.org/debian/ unstable/main libbz2-dev powerpc 1.0.6-4 [35.5 kB]
-Get:83 http://ftp.se.debian.org/debian/ unstable/main libjpeg8-dev powerpc 8d-1 [236 kB]
-Get:84 http://ftp.se.debian.org/debian/ unstable/main liblapack3 powerpc 3.4.2+dfsg-1 [4105 kB]
-Get:85 http://ftp.se.debian.org/debian/ unstable/main liblapack-dev powerpc 3.4.2+dfsg-1 [4363 kB]
-Get:86 http://ftp.se.debian.org/debian/ unstable/main libtinfo-dev powerpc 5.9+20130504-1 [107 kB]
-Get:87 http://ftp.se.debian.org/debian/ unstable/main libncurses5-dev powerpc 5.9+20130504-1 [214 kB]
-Get:88 http://ftp.se.debian.org/debian/ unstable/main libpaper-utils powerpc 1.1.24+nmu2 [18.2 kB]
-Get:89 http://ftp.se.debian.org/debian/ unstable/main libpcre3-dev powerpc 1:8.31-2 [363 kB]
-Get:90 http://ftp.se.debian.org/debian/ unstable/main zlib1g-dev powerpc 1:1.2.8.dfsg-1 [214 kB]
-Get:91 http://ftp.se.debian.org/debian/ unstable/main libpng12-dev powerpc 1.2.49-4 [266 kB]
-Get:92 http://ftp.se.debian.org/debian/ unstable/main libreadline6-dev powerpc 6.2+dfsg-0.1 [187 kB]
-Get:93 http://ftp.se.debian.org/debian/ unstable/main libreadline-dev powerpc 6.2+dfsg-0.1 [900 B]
-Get:94 http://ftp.se.debian.org/debian/ unstable/main zip powerpc 3.0-7 [339 kB]
-Get:95 http://ftp.se.debian.org/debian/ unstable/main unzip powerpc 6.0-9 [191 kB]
-Get:96 http://ftp.se.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:97 http://ftp.se.debian.org/debian/ unstable/main tcl8.5 powerpc 8.5.11-2 [1634 kB]
-Get:98 http://ftp.se.debian.org/debian/ unstable/main tk8.5 powerpc 8.5.11-2 [1174 kB]
+ cpp gcc gcc-4.8-base libgcc1 libgomp1 libstdc++6
+6 upgraded, 98 newly installed, 0 to remove and 32 not upgraded.
+Need to get 59.7 MB/59.7 MB of archives.
+After this operation, 123 MB of additional disk space will be used.
+Get:1 http://ftp.uk.debian.org/debian/ unstable/main libgomp1 powerpc 4.8.1-8 [28.4 kB]
+Get:2 http://ftp.uk.debian.org/debian/ unstable/main gcc-4.8-base powerpc 4.8.1-8 [151 kB]
+Get:3 http://ftp.uk.debian.org/debian/ unstable/main libstdc++6 powerpc 4.8.1-8 [395 kB]
+Get:4 http://ftp.uk.debian.org/debian/ unstable/main libgcc1 powerpc 1:4.8.1-8 [43.7 kB]
+Get:5 http://ftp.uk.debian.org/debian/ unstable/main libpipeline1 powerpc 1.2.4-1 [40.5 kB]
+Get:6 http://ftp.uk.debian.org/debian/ unstable/main libudev0 powerpc 175-7.2 [127 kB]
+Get:7 http://ftp.uk.debian.org/debian/ unstable/main groff-base powerpc 1.22.2-3 [726 kB]
+Get:8 http://ftp.uk.debian.org/debian/ unstable/main bsdmainutils powerpc 9.0.5 [211 kB]
+Get:9 http://ftp.uk.debian.org/debian/ unstable/main man-db powerpc 2.6.5-2 [955 kB]
+Get:10 http://ftp.uk.debian.org/debian/ unstable/main libasprintf0c2 powerpc 0.18.3-1 [30.1 kB]
+Get:11 http://ftp.uk.debian.org/debian/ unstable/main libmagic1 powerpc 1:5.14-2 [216 kB]
+Get:12 http://ftp.uk.debian.org/debian/ unstable/main libxml2 powerpc 2.9.1+dfsg1-2 [866 kB]
+Get:13 http://ftp.uk.debian.org/debian/ unstable/main libdrm2 powerpc 2.4.45-3 [467 kB]
+Get:14 http://ftp.uk.debian.org/debian/ unstable/main libglapi-mesa powerpc 9.1.4-1 [58.3 kB]
+Get:15 http://ftp.uk.debian.org/debian/ unstable/main libxau6 powerpc 1:1.0.8-1 [20.6 kB]
+Get:16 http://ftp.uk.debian.org/debian/ unstable/main libxdmcp6 powerpc 1:1.1.1-1 [25.9 kB]
+Get:17 http://ftp.uk.debian.org/debian/ unstable/main libxcb1 powerpc 1.9.1-3 [46.1 kB]
+Get:18 http://ftp.uk.debian.org/debian/ unstable/main libxcb-dri2-0 powerpc 1.9.1-3 [12.6 kB]
+Get:19 http://ftp.uk.debian.org/debian/ unstable/main libgbm1 powerpc 9.1.4-1 [312 kB]
+Get:20 http://ftp.uk.debian.org/debian/ unstable/main libffi6 powerpc 3.0.13-4 [22.3 kB]
+Get:21 http://ftp.uk.debian.org/debian/ unstable/main libwayland-client0 powerpc 1.1.0-2 [21.3 kB]
+Get:22 http://ftp.uk.debian.org/debian/ unstable/main libwayland-server0 powerpc 1.1.0-2 [30.0 kB]
+Get:23 http://ftp.uk.debian.org/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:24 http://ftp.uk.debian.org/debian/ unstable/main libx11-6 powerpc 2:1.6.0-1 [897 kB]
+Get:25 http://ftp.uk.debian.org/debian/ unstable/main libx11-xcb1 powerpc 2:1.6.0-1 [154 kB]
+Get:26 http://ftp.uk.debian.org/debian/ unstable/main libxcb-render0 powerpc 1.9.1-3 [17.8 kB]
+Get:27 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shape0 powerpc 1.9.1-3 [11.2 kB]
+Get:28 http://ftp.uk.debian.org/debian/ unstable/main libxcb-xfixes0 powerpc 1.9.1-3 [14.2 kB]
+Get:29 http://ftp.uk.debian.org/debian/ unstable/main libegl1-mesa powerpc 9.1.4-1 [76.3 kB]
+Get:30 http://ftp.uk.debian.org/debian/ unstable/main libexpat1 powerpc 2.1.0-4 [143 kB]
+Get:31 http://ftp.uk.debian.org/debian/ unstable/main libfreetype6 powerpc 2.4.9-1.1 [431 kB]
+Get:32 http://ftp.uk.debian.org/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:33 http://ftp.uk.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:34 http://ftp.uk.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:35 http://ftp.uk.debian.org/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:36 http://ftp.uk.debian.org/debian/ unstable/main libfontconfig1 powerpc 2.10.2-2 [319 kB]
+Get:37 http://ftp.uk.debian.org/debian/ unstable/main libxcb-glx0 powerpc 1.9.1-3 [28.5 kB]
+Get:38 http://ftp.uk.debian.org/debian/ unstable/main libxfixes3 powerpc 1:5.0.1-1 [21.9 kB]
+Get:39 http://ftp.uk.debian.org/debian/ unstable/main libxdamage1 powerpc 1:1.1.4-1 [14.9 kB]
+Get:40 http://ftp.uk.debian.org/debian/ unstable/main libxext6 powerpc 2:1.3.2-1 [53.8 kB]
+Get:41 http://ftp.uk.debian.org/debian/ unstable/main libxxf86vm1 powerpc 1:1.1.2-1+deb7u1 [19.3 kB]
+Get:42 http://ftp.uk.debian.org/debian/ unstable/main libgl1-mesa-glx powerpc 9.1.4-1 [124 kB]
+Get:43 http://ftp.uk.debian.org/debian/ unstable/main libpixman-1-0 powerpc 0.30.0-3 [420 kB]
+Get:44 http://ftp.uk.debian.org/debian/ unstable/main libpng12-0 powerpc 1.2.49-4 [186 kB]
+Get:45 http://ftp.uk.debian.org/debian/ unstable/main libxcb-shm0 powerpc 1.9.1-3 [10.7 kB]
+Get:46 http://ftp.uk.debian.org/debian/ unstable/main libxrender1 powerpc 1:0.9.8-1 [32.3 kB]
+Get:47 http://ftp.uk.debian.org/debian/ unstable/main libcairo2 powerpc 1.12.14-5 [1030 kB]
+Get:48 http://ftp.uk.debian.org/debian/ unstable/main libglib2.0-0 powerpc 2.36.3-3 [1926 kB]
+Get:49 http://ftp.uk.debian.org/debian/ unstable/main libcroco3 powerpc 0.6.8-2 [122 kB]
+Get:50 http://ftp.uk.debian.org/debian/ unstable/main libdatrie1 powerpc 0.2.6-2 [28.8 kB]
+Get:51 http://ftp.uk.debian.org/debian/ unstable/main libgfortran3 powerpc 4.8.1-8 [275 kB]
+Get:52 http://ftp.uk.debian.org/debian/ unstable/main libgraphite2-3 powerpc 1.2.3-1 [59.3 kB]
+Get:53 http://ftp.uk.debian.org/debian/ unstable/main libharfbuzz0a powerpc 0.9.19-1 [443 kB]
+Get:54 http://ftp.uk.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:55 http://ftp.uk.debian.org/debian/ unstable/main libice6 powerpc 2:1.0.8-2 [59.7 kB]
+Get:56 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8 powerpc 8d-1 [130 kB]
+Get:57 http://ftp.uk.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:58 http://ftp.uk.debian.org/debian/ unstable/main libthai0 powerpc 0.1.19-2 [41.9 kB]
+Get:59 http://ftp.uk.debian.org/debian/ unstable/main fontconfig powerpc 2.10.2-2 [375 kB]
+Get:60 http://ftp.uk.debian.org/debian/ unstable/main libpango-1.0-0 powerpc 1.32.5-5+b1 [252 kB]
+Get:61 http://ftp.uk.debian.org/debian/ unstable/main libpangoft2-1.0-0 powerpc 1.32.5-5+b1 [184 kB]
+Get:62 http://ftp.uk.debian.org/debian/ unstable/main libpangocairo-1.0-0 powerpc 1.32.5-5+b1 [174 kB]
+Get:63 http://ftp.uk.debian.org/debian/ unstable/main libpaper1 powerpc 1.1.24+nmu2 [21.7 kB]
+Get:64 http://ftp.uk.debian.org/debian/ unstable/main libpcrecpp0 powerpc 1:8.31-2 [129 kB]
+Get:65 http://ftp.uk.debian.org/debian/ unstable/main libsm6 powerpc 2:1.2.1-2 [33.2 kB]
+Get:66 http://ftp.uk.debian.org/debian/ unstable/main libjbig0 powerpc 2.0-2 [31.9 kB]
+Get:67 http://ftp.uk.debian.org/debian/ unstable/main libtiff5 powerpc 4.0.3-1 [239 kB]
+Get:68 http://ftp.uk.debian.org/debian/ unstable/main libunistring0 powerpc 0.9.3-5 [421 kB]
+Get:69 http://ftp.uk.debian.org/debian/ unstable/main libxft2 powerpc 2.3.1-1 [60.6 kB]
+Get:70 http://ftp.uk.debian.org/debian/ unstable/main libxss1 powerpc 1:1.2.2-1 [17.3 kB]
+Get:71 http://ftp.uk.debian.org/debian/ unstable/main libxt6 powerpc 1:1.1.3-1+deb7u1 [196 kB]
+Get:72 http://ftp.uk.debian.org/debian/ unstable/main file powerpc 1:5.14-2 [54.1 kB]
+Get:73 http://ftp.uk.debian.org/debian/ unstable/main gettext-base powerpc 0.18.3-1 [138 kB]
+Get:74 http://ftp.uk.debian.org/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:75 http://ftp.uk.debian.org/debian/ unstable/main cpp powerpc 4:4.6.4-2 [16.9 kB]
+Get:76 http://ftp.uk.debian.org/debian/ unstable/main gettext powerpc 0.18.3-1 [1878 kB]
+Get:77 http://ftp.uk.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:78 http://ftp.uk.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:79 http://ftp.uk.debian.org/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:80 http://ftp.uk.debian.org/debian/ unstable/main gcc powerpc 4:4.6.4-2 [5006 B]
+Get:81 http://ftp.uk.debian.org/debian/ unstable/main gfortran-4.6 powerpc 4.6.4-4 [5186 kB]
+Get:82 http://ftp.uk.debian.org/debian/ unstable/main gfortran powerpc 4:4.6.4-2 [1138 B]
+Get:83 http://ftp.uk.debian.org/debian/ unstable/main libblas3 powerpc 1.2.20110419-5 [192 kB]
+Get:84 http://ftp.uk.debian.org/debian/ unstable/main libblas-dev powerpc 1.2.20110419-5 [204 kB]
+Get:85 http://ftp.uk.debian.org/debian/ unstable/main libbz2-dev powerpc 1.0.6-4 [35.5 kB]
+Get:86 http://ftp.uk.debian.org/debian/ unstable/main libjpeg8-dev powerpc 8d-1 [236 kB]
+Get:87 http://ftp.uk.debian.org/debian/ unstable/main liblapack3 powerpc 3.4.2+dfsg-1 [4105 kB]
+Get:88 http://ftp.uk.debian.org/debian/ unstable/main liblapack-dev powerpc 3.4.2+dfsg-1 [4363 kB]
+Get:89 http://ftp.uk.debian.org/debian/ unstable/main libtinfo-dev powerpc 5.9+20130608-1 [107 kB]
+Get:90 http://ftp.uk.debian.org/debian/ unstable/main libncurses5-dev powerpc 5.9+20130608-1 [213 kB]
+Get:91 http://ftp.uk.debian.org/debian/ unstable/main libpaper-utils powerpc 1.1.24+nmu2 [18.2 kB]
+Get:92 http://ftp.uk.debian.org/debian/ unstable/main libpcre3-dev powerpc 1:8.31-2 [363 kB]
+Get:93 http://ftp.uk.debian.org/debian/ unstable/main zlib1g-dev powerpc 1:1.2.8.dfsg-1 [214 kB]
+Get:94 http://ftp.uk.debian.org/debian/ unstable/main libpng12-dev powerpc 1.2.49-4 [266 kB]
+Get:95 http://ftp.uk.debian.org/debian/ unstable/main libreadline6-dev powerpc 6.2+dfsg-0.1 [187 kB]
+Get:96 http://ftp.uk.debian.org/debian/ unstable/main libreadline-dev powerpc 6.2+dfsg-0.1 [900 B]
+Get:97 http://ftp.uk.debian.org/debian/ unstable/main zip powerpc 3.0-7 [339 kB]
+Get:98 http://ftp.uk.debian.org/debian/ unstable/main unzip powerpc 6.0-9 [191 kB]
+Get:99 http://ftp.uk.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:100 http://ftp.uk.debian.org/debian/ unstable/main tcl8.5 powerpc 8.5.14-2 [1647 kB]
+Get:101 http://ftp.uk.debian.org/debian/ unstable/main tk8.5 powerpc 8.5.14-2 [1180 kB]
+Get:102 http://ftp.uk.debian.org/debian/ unstable/main r-base-core powerpc 3.0.1-6 [21.3 MB]
+Get:103 http://ftp.uk.debian.org/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 84.5 MB in 10s (8310 kB/s)
-(Reading database ... 10827 files and directories currently installed.)
-Preparing to replace libc6-dev:powerpc 2.13-37 (using .../libc6-dev_2.17-2_powerpc.deb) ...
-Unpacking replacement libc6-dev:powerpc ...
-Preparing to replace libc-dev-bin 2.13-37 (using .../libc-dev-bin_2.17-2_powerpc.deb) ...
-Unpacking replacement libc-dev-bin ...
-Preparing to replace libc6:powerpc 2.13-37 (using .../libc6_2.17-2_powerpc.deb) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Unpacking replacement libc6:powerpc ...
-Setting up libc6:powerpc (2.17-2) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Nothing to restart.
-(Reading database ... 10852 files and directories currently installed.)
-Preparing to replace libtinfo5:powerpc 5.9-10 (using .../libtinfo5_5.9+20130504-1_powerpc.deb) ...
-Unpacking replacement libtinfo5:powerpc ...
-Setting up libtinfo5:powerpc (5.9+20130504-1) ...
-(Reading database ... 10852 files and directories currently installed.)
-Preparing to replace libncurses5:powerpc 5.9-10 (using .../libncurses5_5.9+20130504-1_powerpc.deb) ...
-Unpacking replacement libncurses5:powerpc ...
-Setting up libncurses5:powerpc (5.9+20130504-1) ...
-(Reading database ... 10852 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_powerpc.deb) ...
-Unpacking replacement ncurses-bin ...
-Setting up ncurses-bin (5.9+20130504-1) ...
-(Reading database ... 10850 files and directories currently installed.)
-Preparing to replace libreadline6:powerpc 6.2-9 (using .../libreadline6_6.2+dfsg-0.1_powerpc.deb) ...
-Unpacking replacement libreadline6:powerpc ...
-Setting up libreadline6:powerpc (6.2+dfsg-0.1) ...
-(Reading database ... 10850 files and directories currently installed.)
-Preparing to replace zlib1g:powerpc 1:1.2.7.dfsg-13 (using .../zlib1g_1%3a1.2.8.dfsg-1_powerpc.deb) ...
-Unpacking replacement zlib1g:powerpc ...
-Setting up zlib1g:powerpc (1:1.2.8.dfsg-1) ...
+Fetched 59.7 MB in 16s (3614 kB/s)
+(Reading database ... 10892 files and directories currently installed.)
+Preparing to replace libgomp1:powerpc 4.8.1-3 (using .../libgomp1_4.8.1-8_powerpc.deb) ...
+Unpacking replacement libgomp1:powerpc ...
+Preparing to replace gcc-4.8-base:powerpc 4.8.1-3 (using .../gcc-4.8-base_4.8.1-8_powerpc.deb) ...
+Unpacking replacement gcc-4.8-base:powerpc ...
+Setting up gcc-4.8-base:powerpc (4.8.1-8) ...
+(Reading database ... 10892 files and directories currently installed.)
+Preparing to replace libstdc++6:powerpc 4.8.1-3 (using .../libstdc++6_4.8.1-8_powerpc.deb) ...
+Unpacking replacement libstdc++6:powerpc ...
+Setting up libstdc++6:powerpc (4.8.1-8) ...
+Processing triggers for libc-bin ...
+(Reading database ... 10892 files and directories currently installed.)
+Preparing to replace libgcc1:powerpc 1:4.8.1-3 (using .../libgcc1_1%3a4.8.1-8_powerpc.deb) ...
+Unpacking replacement libgcc1:powerpc ...
+Setting up libgcc1:powerpc (1:4.8.1-8) ...
+Processing triggers for libc-bin ...
Selecting previously unselected package libpipeline1:powerpc.
-(Reading database ... 10850 files and directories currently installed.)
-Unpacking libpipeline1:powerpc (from .../libpipeline1_1.2.3-1_powerpc.deb) ...
+(Reading database ... 10892 files and directories currently installed.)
+Unpacking libpipeline1:powerpc (from .../libpipeline1_1.2.4-1_powerpc.deb) ...
+Selecting previously unselected package libudev0:powerpc.
+Unpacking libudev0:powerpc (from .../libudev0_175-7.2_powerpc.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_powerpc.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_powerpc.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_powerpc.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_powerpc.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_powerpc.deb) ...
Selecting previously unselected package libasprintf0c2:powerpc.
-Unpacking libasprintf0c2:powerpc (from .../libasprintf0c2_0.18.1.1-10_powerpc.deb) ...
+Unpacking libasprintf0c2:powerpc (from .../libasprintf0c2_0.18.3-1_powerpc.deb) ...
Selecting previously unselected package libmagic1:powerpc.
-Unpacking libmagic1:powerpc (from .../libmagic1_1%3a5.14-1_powerpc.deb) ...
-Selecting previously unselected package libpcre3:powerpc.
-Unpacking libpcre3:powerpc (from .../libpcre3_1%3a8.31-2_powerpc.deb) ...
+Unpacking libmagic1:powerpc (from .../libmagic1_1%3a5.14-2_powerpc.deb) ...
Selecting previously unselected package libxml2:powerpc.
-Unpacking libxml2:powerpc (from .../libxml2_2.8.0+dfsg1-7+nmu1_powerpc.deb) ...
+Unpacking libxml2:powerpc (from .../libxml2_2.9.1+dfsg1-2_powerpc.deb) ...
+Selecting previously unselected package libdrm2:powerpc.
+Unpacking libdrm2:powerpc (from .../libdrm2_2.4.45-3_powerpc.deb) ...
+Selecting previously unselected package libglapi-mesa:powerpc.
+Unpacking libglapi-mesa:powerpc (from .../libglapi-mesa_9.1.4-1_powerpc.deb) ...
+Selecting previously unselected package libxau6:powerpc.
+Unpacking libxau6:powerpc (from .../libxau6_1%3a1.0.8-1_powerpc.deb) ...
+Selecting previously unselected package libxdmcp6:powerpc.
+Unpacking libxdmcp6:powerpc (from .../libxdmcp6_1%3a1.1.1-1_powerpc.deb) ...
+Selecting previously unselected package libxcb1:powerpc.
+Unpacking libxcb1:powerpc (from .../libxcb1_1.9.1-3_powerpc.deb) ...
+Selecting previously unselected package libxcb-dri2-0:powerpc.
+Unpacking libxcb-dri2-0:powerpc (from .../libxcb-dri2-0_1.9.1-3_powerpc.deb) ...
+Selecting previously unselected package libgbm1:powerpc.
+Unpacking libgbm1:powerpc (from .../libgbm1_9.1.4-1_powerpc.deb) ...
+Selecting previously unselected package libffi6:powerpc.
+Unpacking libffi6:powerpc (from .../libffi6_3.0.13-4_powerpc.deb) ...
+Selecting previously unselected package libwayland-client0:powerpc.
+Unpacking libwayland-client0:powerpc (from .../libwayland-client0_1.1.0-2_powerpc.deb) ...
+Selecting previously unselected package libwayland-server0:powerpc.
+Unpacking libwayland-server0:powerpc (from .../libwayland-server0_1.1.0-2_powerpc.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:powerpc.
+Unpacking libx11-6:powerpc (from .../libx11-6_2%3a1.6.0-1_powerpc.deb) ...
+Selecting previously unselected package libx11-xcb1:powerpc.
+Unpacking libx11-xcb1:powerpc (from .../libx11-xcb1_2%3a1.6.0-1_powerpc.deb) ...
+Selecting previously unselected package libxcb-render0:powerpc.
+Unpacking libxcb-render0:powerpc (from .../libxcb-render0_1.9.1-3_powerpc.deb) ...
+Selecting previously unselected package libxcb-shape0:powerpc.
+Unpacking libxcb-shape0:powerpc (from .../libxcb-shape0_1.9.1-3_powerpc.deb) ...
+Selecting previously unselected package libxcb-xfixes0:powerpc.
+Unpacking libxcb-xfixes0:powerpc (from .../libxcb-xfixes0_1.9.1-3_powerpc.deb) ...
+Selecting previously unselected package libegl1-mesa:powerpc.
+Unpacking libegl1-mesa:powerpc (from .../libegl1-mesa_9.1.4-1_powerpc.deb) ...
Selecting previously unselected package libexpat1:powerpc.
-Unpacking libexpat1:powerpc (from .../libexpat1_2.1.0-3_powerpc.deb) ...
+Unpacking libexpat1:powerpc (from .../libexpat1_2.1.0-4_powerpc.deb) ...
Selecting previously unselected package libfreetype6:powerpc.
Unpacking libfreetype6:powerpc (from .../libfreetype6_2.4.9-1.1_powerpc.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:powerpc.
-Unpacking libfontconfig1:powerpc (from .../libfontconfig1_2.9.0-7.1_powerpc.deb) ...
+Unpacking libfontconfig1:powerpc (from .../libfontconfig1_2.10.2-2_powerpc.deb) ...
+Selecting previously unselected package libxcb-glx0:powerpc.
+Unpacking libxcb-glx0:powerpc (from .../libxcb-glx0_1.9.1-3_powerpc.deb) ...
+Selecting previously unselected package libxfixes3:powerpc.
+Unpacking libxfixes3:powerpc (from .../libxfixes3_1%3a5.0.1-1_powerpc.deb) ...
+Selecting previously unselected package libxdamage1:powerpc.
+Unpacking libxdamage1:powerpc (from .../libxdamage1_1%3a1.1.4-1_powerpc.deb) ...
+Selecting previously unselected package libxext6:powerpc.
+Unpacking libxext6:powerpc (from .../libxext6_2%3a1.3.2-1_powerpc.deb) ...
+Selecting previously unselected package libxxf86vm1:powerpc.
+Unpacking libxxf86vm1:powerpc (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_powerpc.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:powerpc.
+Unpacking libgl1-mesa-glx:powerpc (from .../libgl1-mesa-glx_9.1.4-1_powerpc.deb) ...
Selecting previously unselected package libpixman-1-0:powerpc.
-Unpacking libpixman-1-0:powerpc (from .../libpixman-1-0_0.26.0-4_powerpc.deb) ...
+Unpacking libpixman-1-0:powerpc (from .../libpixman-1-0_0.30.0-3_powerpc.deb) ...
Selecting previously unselected package libpng12-0:powerpc.
Unpacking libpng12-0:powerpc (from .../libpng12-0_1.2.49-4_powerpc.deb) ...
-Selecting previously unselected package libxau6:powerpc.
-Unpacking libxau6:powerpc (from .../libxau6_1%3a1.0.7-1_powerpc.deb) ...
-Selecting previously unselected package libxdmcp6:powerpc.
-Unpacking libxdmcp6:powerpc (from .../libxdmcp6_1%3a1.1.1-1_powerpc.deb) ...
-Selecting previously unselected package libxcb1:powerpc.
-Unpacking libxcb1:powerpc (from .../libxcb1_1.8.1-2_powerpc.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:powerpc.
-Unpacking libx11-6:powerpc (from .../libx11-6_2%3a1.5.0-1_powerpc.deb) ...
-Selecting previously unselected package libxcb-render0:powerpc.
-Unpacking libxcb-render0:powerpc (from .../libxcb-render0_1.8.1-2_powerpc.deb) ...
Selecting previously unselected package libxcb-shm0:powerpc.
-Unpacking libxcb-shm0:powerpc (from .../libxcb-shm0_1.8.1-2_powerpc.deb) ...
-Selecting previously unselected package libxext6:powerpc.
-Unpacking libxext6:powerpc (from .../libxext6_2%3a1.3.1-2_powerpc.deb) ...
+Unpacking libxcb-shm0:powerpc (from .../libxcb-shm0_1.9.1-3_powerpc.deb) ...
Selecting previously unselected package libxrender1:powerpc.
-Unpacking libxrender1:powerpc (from .../libxrender1_1%3a0.9.7-1_powerpc.deb) ...
+Unpacking libxrender1:powerpc (from .../libxrender1_1%3a0.9.8-1_powerpc.deb) ...
Selecting previously unselected package libcairo2:powerpc.
-Unpacking libcairo2:powerpc (from .../libcairo2_1.12.14-4_powerpc.deb) ...
-Selecting previously unselected package libffi6:powerpc.
-Unpacking libffi6:powerpc (from .../libffi6_3.0.13-4_powerpc.deb) ...
+Unpacking libcairo2:powerpc (from .../libcairo2_1.12.14-5_powerpc.deb) ...
Selecting previously unselected package libglib2.0-0:powerpc.
-Unpacking libglib2.0-0:powerpc (from .../libglib2.0-0_2.36.1-2build1_powerpc.deb) ...
+Unpacking libglib2.0-0:powerpc (from .../libglib2.0-0_2.36.3-3_powerpc.deb) ...
Selecting previously unselected package libcroco3:powerpc.
-Unpacking libcroco3:powerpc (from .../libcroco3_0.6.6-2_powerpc.deb) ...
+Unpacking libcroco3:powerpc (from .../libcroco3_0.6.8-2_powerpc.deb) ...
Selecting previously unselected package libdatrie1:powerpc.
Unpacking libdatrie1:powerpc (from .../libdatrie1_0.2.6-2_powerpc.deb) ...
-Selecting previously unselected package libunistring0:powerpc.
-Unpacking libunistring0:powerpc (from .../libunistring0_0.9.3-5_powerpc.deb) ...
-Selecting previously unselected package libgettextpo0:powerpc.
-Unpacking libgettextpo0:powerpc (from .../libgettextpo0_0.18.1.1-10_powerpc.deb) ...
-Selecting previously unselected package gcc-4.8-base:powerpc.
-Unpacking gcc-4.8-base:powerpc (from .../gcc-4.8-base_4.8.0-7_powerpc.deb) ...
Selecting previously unselected package libgfortran3:powerpc.
-Unpacking libgfortran3:powerpc (from .../libgfortran3_4.8.0-7_powerpc.deb) ...
+Unpacking libgfortran3:powerpc (from .../libgfortran3_4.8.1-8_powerpc.deb) ...
+Selecting previously unselected package libgraphite2-3:powerpc.
+Unpacking libgraphite2-3:powerpc (from .../libgraphite2-3_1.2.3-1_powerpc.deb) ...
+Selecting previously unselected package libharfbuzz0a:powerpc.
+Unpacking libharfbuzz0a:powerpc (from .../libharfbuzz0a_0.9.19-1_powerpc.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:powerpc.
Unpacking libice6:powerpc (from .../libice6_2%3a1.0.8-2_powerpc.deb) ...
Selecting previously unselected package libjpeg8:powerpc.
Unpacking libjpeg8:powerpc (from .../libjpeg8_8d-1_powerpc.deb) ...
-Preparing to replace libmpfr4:powerpc 3.1.0-5 (using .../libmpfr4_3.1.1-1_powerpc.deb) ...
-Unpacking replacement libmpfr4:powerpc ...
Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:powerpc.
Unpacking libthai0:powerpc (from .../libthai0_0.1.19-2_powerpc.deb) ...
-Selecting previously unselected package libxft2:powerpc.
-Unpacking libxft2:powerpc (from .../libxft2_2.3.1-1_powerpc.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_powerpc.deb) ...
-Selecting previously unselected package libpango1.0-0:powerpc.
-Unpacking libpango1.0-0:powerpc (from .../libpango1.0-0_1.30.0-1_powerpc.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_powerpc.deb) ...
+Selecting previously unselected package libpango-1.0-0:powerpc.
+Unpacking libpango-1.0-0:powerpc (from .../libpango-1.0-0_1.32.5-5+b1_powerpc.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:powerpc.
+Unpacking libpangoft2-1.0-0:powerpc (from .../libpangoft2-1.0-0_1.32.5-5+b1_powerpc.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:powerpc.
+Unpacking libpangocairo-1.0-0:powerpc (from .../libpangocairo-1.0-0_1.32.5-5+b1_powerpc.deb) ...
Selecting previously unselected package libpaper1:powerpc.
Unpacking libpaper1:powerpc (from .../libpaper1_1.1.24+nmu2_powerpc.deb) ...
Selecting previously unselected package libpcrecpp0:powerpc.
@@ -440,47 +443,38 @@ Unpacking libsm6:powerpc (from .../libsm6_2%3a1.2.1-2_powerpc.deb) ...
Selecting previously unselected package libjbig0:powerpc.
Unpacking libjbig0:powerpc (from .../libjbig0_2.0-2_powerpc.deb) ...
Selecting previously unselected package libtiff5:powerpc.
-Unpacking libtiff5:powerpc (from .../libtiff5_4.0.2-6_powerpc.deb) ...
+Unpacking libtiff5:powerpc (from .../libtiff5_4.0.3-1_powerpc.deb) ...
+Selecting previously unselected package libunistring0:powerpc.
+Unpacking libunistring0:powerpc (from .../libunistring0_0.9.3-5_powerpc.deb) ...
+Selecting previously unselected package libxft2:powerpc.
+Unpacking libxft2:powerpc (from .../libxft2_2.3.1-1_powerpc.deb) ...
Selecting previously unselected package libxss1:powerpc.
Unpacking libxss1:powerpc (from .../libxss1_1%3a1.2.2-1_powerpc.deb) ...
Selecting previously unselected package libxt6:powerpc.
-Unpacking libxt6:powerpc (from .../libxt6_1%3a1.1.3-1_powerpc.deb) ...
-Selecting previously unselected package libmpc3:powerpc.
-Unpacking libmpc3:powerpc (from .../libmpc3_1.0.1-1_powerpc.deb) ...
+Unpacking libxt6:powerpc (from .../libxt6_1%3a1.1.3-1+deb7u1_powerpc.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_powerpc.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_powerpc.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_powerpc.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_powerpc.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Preparing to replace libstdc++6-4.6-dev 4.6.3-14 (using .../libstdc++6-4.6-dev_4.6.4-2_powerpc.deb) ...
-Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.3-14 (using .../g++-4.6_4.6.4-2_powerpc.deb) ...
-Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.3-14 (using .../gcc-4.6_4.6.4-2_powerpc.deb) ...
-Unpacking replacement gcc-4.6 ...
-Preparing to replace cpp-4.6 4.6.3-14 (using .../cpp-4.6_4.6.4-2_powerpc.deb) ...
-Unpacking replacement cpp-4.6 ...
-Preparing to replace gcc-4.6-base:powerpc 4.6.3-14 (using .../gcc-4.6-base_4.6.4-2_powerpc.deb) ...
-Unpacking replacement gcc-4.6-base:powerpc ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_powerpc.deb) ...
-Selecting previously unselected package libasprintf-dev:powerpc.
-Unpacking libasprintf-dev:powerpc (from .../libasprintf-dev_0.18.1.1-10_powerpc.deb) ...
-Selecting previously unselected package libgettextpo-dev:powerpc.
-Unpacking libgettextpo-dev:powerpc (from .../libgettextpo-dev_0.18.1.1-10_powerpc.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
+Preparing to replace cpp 4:4.6.4-1 (using .../cpp_4%3a4.6.4-2_powerpc.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_powerpc.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_powerpc.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130509_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Preparing to replace gcc 4:4.6.4-1 (using .../gcc_4%3a4.6.4-2_powerpc.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_powerpc.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-4_powerpc.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_powerpc.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.4-2_powerpc.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_powerpc.deb) ...
Selecting previously unselected package libblas-dev.
@@ -494,9 +488,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_powerpc.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_powerpc.deb) ...
Selecting previously unselected package libtinfo-dev:powerpc.
-Unpacking libtinfo-dev:powerpc (from .../libtinfo-dev_5.9+20130504-1_powerpc.deb) ...
+Unpacking libtinfo-dev:powerpc (from .../libtinfo-dev_5.9+20130608-1_powerpc.deb) ...
Selecting previously unselected package libncurses5-dev:powerpc.
-Unpacking libncurses5-dev:powerpc (from .../libncurses5-dev_5.9+20130504-1_powerpc.deb) ...
+Unpacking libncurses5-dev:powerpc (from .../libncurses5-dev_5.9+20130608-1_powerpc.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_powerpc.deb) ...
Selecting previously unselected package libpcre3-dev:powerpc.
@@ -516,91 +510,103 @@ Unpacking unzip (from .../unzip_6.0-9_powerpc.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_powerpc.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_powerpc.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_powerpc.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_powerpc.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1-1_powerpc.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_powerpc.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1-1_all.deb) ...
-Setting up libc-dev-bin (2.17-2) ...
-Setting up libc6-dev:powerpc (2.17-2) ...
-Setting up libpipeline1:powerpc (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:powerpc (4.8.1-8) ...
+Setting up libpipeline1:powerpc (1.2.4-1) ...
+Setting up libudev0:powerpc (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
-Setting up man-db (2.6.3-6) ...
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:powerpc (0.18.1.1-10) ...
-Setting up libmagic1:powerpc (1:5.14-1) ...
-Setting up libpcre3:powerpc (1:8.31-2) ...
-Setting up libxml2:powerpc (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:powerpc (2.1.0-3) ...
+Setting up libasprintf0c2:powerpc (0.18.3-1) ...
+Setting up libmagic1:powerpc (1:5.14-2) ...
+Setting up libxml2:powerpc (2.9.1+dfsg1-2) ...
+Setting up libdrm2:powerpc (2.4.45-3) ...
+Setting up libglapi-mesa:powerpc (9.1.4-1) ...
+Setting up libxau6:powerpc (1:1.0.8-1) ...
+Setting up libxdmcp6:powerpc (1:1.1.1-1) ...
+Setting up libxcb1:powerpc (1.9.1-3) ...
+Setting up libxcb-dri2-0:powerpc (1.9.1-3) ...
+Setting up libgbm1:powerpc (9.1.4-1) ...
+Setting up libffi6:powerpc (3.0.13-4) ...
+Setting up libwayland-client0:powerpc (1.1.0-2) ...
+Setting up libwayland-server0:powerpc (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:powerpc (2:1.6.0-1) ...
+Setting up libx11-xcb1:powerpc (2:1.6.0-1) ...
+Setting up libxcb-render0:powerpc (1.9.1-3) ...
+Setting up libxcb-shape0:powerpc (1.9.1-3) ...
+Setting up libxcb-xfixes0:powerpc (1.9.1-3) ...
+Setting up libegl1-mesa:powerpc (9.1.4-1) ...
+Setting up libexpat1:powerpc (2.1.0-4) ...
Setting up libfreetype6:powerpc (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:powerpc (2.9.0-7.1) ...
-Setting up libpixman-1-0:powerpc (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:powerpc (2.10.2-2) ...
+Setting up libxcb-glx0:powerpc (1.9.1-3) ...
+Setting up libxfixes3:powerpc (1:5.0.1-1) ...
+Setting up libxdamage1:powerpc (1:1.1.4-1) ...
+Setting up libxext6:powerpc (2:1.3.2-1) ...
+Setting up libxxf86vm1:powerpc (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:powerpc (9.1.4-1) ...
+Setting up libpixman-1-0:powerpc (0.30.0-3) ...
Setting up libpng12-0:powerpc (1.2.49-4) ...
-Setting up libxau6:powerpc (1:1.0.7-1) ...
-Setting up libxdmcp6:powerpc (1:1.1.1-1) ...
-Setting up libxcb1:powerpc (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:powerpc (2:1.5.0-1) ...
-Setting up libxcb-render0:powerpc (1.8.1-2) ...
-Setting up libxcb-shm0:powerpc (1.8.1-2) ...
-Setting up libxext6:powerpc (2:1.3.1-2) ...
-Setting up libxrender1:powerpc (1:0.9.7-1) ...
-Setting up libcairo2:powerpc (1.12.14-4) ...
-Setting up libffi6:powerpc (3.0.13-4) ...
-Setting up libglib2.0-0:powerpc (2.36.1-2build1) ...
+Setting up libxcb-shm0:powerpc (1.9.1-3) ...
+Setting up libxrender1:powerpc (1:0.9.8-1) ...
+Setting up libcairo2:powerpc (1.12.14-5) ...
+Setting up libglib2.0-0:powerpc (2.36.3-3) ...
No schema files found: doing nothing.
-Setting up libcroco3:powerpc (0.6.6-2) ...
+Setting up libcroco3:powerpc (0.6.8-2) ...
Setting up libdatrie1:powerpc (0.2.6-2) ...
-Setting up libunistring0:powerpc (0.9.3-5) ...
-Setting up libgettextpo0:powerpc (0.18.1.1-10) ...
-Setting up gcc-4.8-base:powerpc (4.8.0-7) ...
-Setting up libgfortran3:powerpc (4.8.0-7) ...
+Setting up libgfortran3:powerpc (4.8.1-8) ...
+Setting up libgraphite2-3:powerpc (1.2.3-1) ...
+Setting up libharfbuzz0a:powerpc (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6:powerpc (2:1.0.8-2) ...
Setting up libjpeg8:powerpc (8d-1) ...
-Setting up libmpfr4:powerpc (3.1.1-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:powerpc (0.1.19-2) ...
-Setting up libxft2:powerpc (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:powerpc (1.30.0-1) ...
+Setting up libpango-1.0-0:powerpc (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:powerpc (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:powerpc (1.32.5-5+b1) ...
Setting up libpaper1:powerpc (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:powerpc (1:8.31-2) ...
Setting up libsm6:powerpc (2:1.2.1-2) ...
Setting up libjbig0:powerpc (2.0-2) ...
-Setting up libtiff5:powerpc (4.0.2-6) ...
+Setting up libtiff5:powerpc (4.0.3-1) ...
+Setting up libunistring0:powerpc (0.9.3-5) ...
+Setting up libxft2:powerpc (2.3.1-1) ...
Setting up libxss1:powerpc (1:1.2.2-1) ...
-Setting up libxt6:powerpc (1:1.1.3-1) ...
-Setting up libmpc3:powerpc (1.0.1-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up gcc-4.6-base:powerpc (4.6.4-2) ...
-Setting up cpp-4.6 (4.6.4-2) ...
-Setting up gcc-4.6 (4.6.4-2) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libasprintf-dev:powerpc (0.18.1.1-10) ...
-Setting up libgettextpo-dev:powerpc (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:powerpc (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up cpp (4:4.6.4-2) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130509) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up gcc (4:4.6.4-2) ...
+Setting up gfortran-4.6 (4.6.4-4) ...
+Setting up gfortran (4:4.6.4-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -612,8 +618,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:powerpc (5.9+20130504-1) ...
-Setting up libncurses5-dev:powerpc (5.9+20130504-1) ...
+Setting up libtinfo-dev:powerpc (5.9+20130608-1) ...
+Setting up libncurses5-dev:powerpc (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:powerpc (1:8.31-2) ...
Setting up zlib1g-dev:powerpc (1:1.2.8.dfsg-1) ...
@@ -623,25 +629,24 @@ Setting up libreadline-dev:powerpc (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1-1) ...
-Setting up g++-4.6 (4.6.4-2) ...
-Setting up libstdc++6-4.6-dev (4.6.4-2) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 55 not upgraded.
-Checking correctness of dependencies...
-Kernel: Linux 2.6.32-5-powerpc64 powerpc (ppc64)
-Toolchain package versions: binutils_2.22-7.1 dpkg-dev_1.16.9 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6-dev_2.17-2 libstdc++6_4.7.2-4 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.2.35-2
-Package versions: apt_0.9.7.7 base-files_7.1 base-passwd_3.5.26 bash_4.2-5.1 binutils_2.22-7.1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.3 build-essential_11.5 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.13-3.2 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 debconf_1.5.48 debfoster_2.7-1.2 debhelper_9.20130509 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-7 dpkg_1.16.9 dpkg-dev_1.16.9 e2fslibs_1.42.5-1 e2fsprogs_1.42.5-1 fakeroot_1.18.4-2 file_1:5.14-1 findutils_4.4.2-5 fontconfig_ [...]
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
+Processing triggers for libc-bin ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: Linux 3.2.0-4-powerpc64 powerpc (ppc64)
+Toolchain package versions: binutils_2.23.52.20130620-1 dpkg-dev_1.16.10 g++-4.6_4.6.4-4 gcc-4.6_4.6.4-4 libc6-dev_2.17-6 libstdc++6_4.8.1-8 libstdc++6-4.6-dev_4.6.4-4 linux-libc-dev_3.9.6-1
+Package versions: apt_0.9.8.2 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130620-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.4 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.13-3.2 cpp_4:4.6.4-2 cpp-4.6_4.6.4-4 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.8-1 e2fsprogs_1.42.8-1 fakeroot_1.19-2 file_1:5.14-2 findutils_4.4.2- [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -651,28 +656,45 @@ Package versions: apt_0.9.7.7 base-files_7.1 base-passwd_3.5.26 bash_4.2-5.1 bin
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-powerpc-sbuild
+SCHROOT_CHROOT_NAME=sid-powerpc-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-powerpc-sbuild-3255047d-6f8f-4b85-bd34-1b58f5a4e6d9
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+USER=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture powerpc
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -688,7 +710,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -707,26 +729,26 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -736,13 +758,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-lim
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -750,7 +772,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -786,9 +808,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save
- gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -810,6 +832,7 @@ dh_shlibdeps -pr-bioc-limma
dh_gencontrol -pr-bioc-limma
echo misc:Depends= >> debian/r-bioc-limma.substvars
dpkg-gencontrol -ldebian/changelog -Tdebian/r-bioc-limma.substvars -Pdebian/r-bioc-limma
+dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe
chmod 644 debian/r-bioc-limma/DEBIAN/control
chown 0:0 debian/r-bioc-limma/DEBIAN/control
dh_md5sums -pr-bioc-limma
@@ -818,79 +841,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_powerpc.deb'.
- dpkg-genchanges -B -mpowerpc Build Daemon (praetorius) <buildd_powerpc-praetorius at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_powerpc.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_powerpc.deb'.
+ dpkg-genchanges -B -mpowerpc Build Daemon (poulenc) <buildd_powerpc-poulenc at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_powerpc.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130516-1540
+Build finished at 20130804-0936
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_powerpc.changes:
+───────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_powerpc.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: powerpc
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: powerpc Build Daemon (praetorius) <buildd_powerpc-praetorius at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: powerpc Build Daemon (poulenc) <buildd_powerpc-poulenc at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
- .
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- bdbde945a715490a1530b174014b4d50e1306475 1618464 r-bioc-limma_3.16.3~dfsg-1_powerpc.deb
+ ce31bcaf1b33b35ff990f3e3347f4084d4cda14e 863466 r-bioc-limma_3.16.7~dfsg-1_powerpc.deb
Checksums-Sha256:
- b4bfe463c59d8e12e9129dc61189a1508e32118925bce9dd94066fc9699bf982 1618464 r-bioc-limma_3.16.3~dfsg-1_powerpc.deb
+ db1e297bf52f243086e76a0b0459d252acdcf90eb12a94b51e071c87c5c6d4f6 863466 r-bioc-limma_3.16.7~dfsg-1_powerpc.deb
Files:
- d157c01a405c4c1219da6f25859d78ae 1618464 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_powerpc.deb
+ c8d50adb2a3a72340fb2538f4b6bd4de 863466 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_powerpc.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_powerpc.deb
+r-bioc-limma_3.16.7~dfsg-1_powerpc.deb
──────────────────────────────────────
new debian package, version 2.0.
- size 1618464 bytes: control archive= 1674 bytes.
+ size 863466 bytes: control archive=1632 bytes.
777 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: powerpc
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1846
- Depends: libc6 (>= 2.1.3), r-base-core (>= 3.0.1-1)
+ Installed-Size: 1059
+ Depends: libc6 (>= 2.1.3), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -902,90 +922,91 @@ r-bioc-limma_3.16.3~dfsg-1_powerpc.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-16 15:40 ./
-drwxr-xr-x root/root 0 2013-05-16 15:40 ./usr/
-drwxr-xr-x root/root 0 2013-05-16 15:39 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-16 15:39 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-16 15:40 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-16 15:39 ./usr/lib/R/site-library/limma/
-drwxr-xr-x root/root 0 2013-05-16 15:40 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 8444 2013-05-16 15:40 ./usr/lib/R/site-library/limma/libs/limma.so
--rw-r--r-- root/root 963 2013-05-16 15:39 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 11214 2013-05-16 15:39 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2013-05-16 15:39 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 6375 2013-05-16 15:39 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 219 2013-05-16 15:39 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 1073 2013-05-16 15:39 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 5944 2013-05-16 15:39 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 3089 2013-05-16 15:39 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 541 2013-05-16 15:39 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 10085 2013-05-16 15:39 ./usr/lib/R/site-library/limma/INDEX
--rw-r--r-- root/root 2046 2013-05-16 15:39 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2013-05-16 15:39 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 2567 2013-05-16 15:39 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 3417 2013-05-16 15:39 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 1408 2013-05-16 15:39 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 6703 2013-05-16 15:39 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 495137 2013-05-16 15:39 ./usr/lib/R/site-library/limma/help/limma.rdb
-drwxr-xr-x root/root 0 2013-05-16 15:39 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 37337 2013-05-16 15:39 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2013-05-16 15:39 ./usr/lib/R/site-library/limma/html/R.css
-drwxr-xr-x root/root 0 2013-05-16 15:39 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 1711 2013-05-16 15:39 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 102936 2013-05-16 15:39 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 806089 2013-05-16 15:39 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 45597 2013-05-16 15:39 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 673 2013-05-16 15:39 ./usr/lib/R/site-library/limma/doc/index.html
-drwxr-xr-x root/root 0 2013-05-16 15:39 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 1056 2013-05-16 15:39 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 4103 2013-05-16 15:39 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 206556 2013-05-16 15:39 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 993 2013-05-16 15:39 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2013-05-16 15:40 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-16 15:40 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-16 15:40 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
-drwxr-xr-x root/root 0 2013-05-16 15:40 ./usr/share/doc/r-bioc-limma/tests/
--rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 2095 2013-08-04 09:36 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 993 2013-08-04 09:36 ./usr/lib/R/site-library/limma/DESCRIPTION
+-rw-r--r-- root/root 11214 2013-08-04 09:36 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 2577 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 1393 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 3445 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 6742 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 492879 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/limma.rdb
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 8396 2013-08-04 09:36 ./usr/lib/R/site-library/limma/libs/limma.so
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2013-08-04 09:36 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 37564 2013-08-04 09:36 ./usr/lib/R/site-library/limma/html/00Index.html
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 219 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 6386 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5952 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 3098 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 542 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 1076 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 10085 2013-08-04 09:36 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 1056 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 4127 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 207873 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/limma.rdb
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 45597 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 104280 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 1711 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 673 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 963 2013-08-04 09:36 ./usr/lib/R/site-library/limma/CITATION
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-powerpc-sbuild-b95decec-5ca4-4026-936e-72d0c9b45524/build/buildd-r-bioc-limma_3.16.3~dfsg-1-powerpc-rUwN9C
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: powerpc
-Build-Space: 5888
-Build-Time: 23
+Build Architecture: powerpc
+Build-Space: 3568
+Build-Time: 27
Distribution: sid
-Install-Time: 188
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: powerpc
+Install-Time: 149
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: powerpc
Package: r-bioc-limma
-Package-Time: 252
-Source-Version: 3.16.3~dfsg-1
-Space: 5888
+Package-Time: 219
+Source-Version: 3.16.7~dfsg-1
+Space: 3568
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130516-1540
-Build needed 00:04:12, 5888k disc space
-Signature with key '0E6E7223' requested:
+Finished at 20130804-0936
+Build needed 00:03:39, 3568k disc space
+Signature with key 'C5E51171' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_powerpc.changes C5E51171
+Successfully signed changes file
diff --git a/s390.log b/s390.log
index a5c864f..69451fc 100644
--- a/s390.log
+++ b/s390.log
@@ -1,29 +1,29 @@
-From buildd at zappa.debian.org Fri May 17 14:12:53 2013
+From buildd at zappa.debian.org Sun Aug 04 09:38:53 2013
Return-path: <buildd at zappa.debian.org>
-Received: from mailly.debian.org ([82.195.75.114])
+Received: from muffat.debian.org ([206.12.19.146])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=mailly.debian.org, EMAIL=hostmaster at mailly.debian.org (verified)
+ CN=muffat.debian.org, EMAIL=hostmaster at muffat.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
(Exim 4.72) (envelope-from <buildd at zappa.debian.org>)
- id 1UdLOv-0007Bl-B4
- for logs at buildd.debian.org; Fri, 17 May 2013 14:12:53 +0000
+ id 1V5um4-0000uQ-Nu
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 09:38:53 +0000
Received: from [148.100.96.103] (helo=zappa.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=zappa.debian.org, EMAIL=hostmaster at zappa.debian.org (verified)
- by mailly.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:256)
+ by muffat.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:256)
(Exim 4.80) (envelope-from <buildd at zappa.debian.org>)
- id 1UdLOu-0002k8-D9; Fri, 17 May 2013 14:12:52 +0000
+ id 1V5um2-000109-1E; Sun, 04 Aug 2013 09:38:50 +0000
Received: from buildd by zappa.debian.org with local (Exim 4.72)
(envelope-from <buildd at zappa.debian.org>)
- id 1UdLOt-0000Fp-07; Fri, 17 May 2013 14:12:51 +0000
-Message-Id: <E1UdLOt-0000Fp-07 at zappa.debian.org>
+ id 1V5um0-0002nz-Ly; Sun, 04 Aug 2013 09:38:48 +0000
+Message-Id: <E1V5um0-0002nz-Ly at zappa.debian.org>
MIME-Version: 1.0
Content-Transfer-Encoding: binary
X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Fri, 17 May 2013 14:12:50 +0000
+Date: Sun, 4 Aug 2013 09:38:48 +0000
From: buildd on zappa <buildd at zappa.debian.org>
To: phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on s390
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on s390
(dist=sid)
Key-Id: 09D4EA98
Delivered-To: logs at buildd.debian.org
@@ -31,35 +31,32 @@ Delivered-To: logs at buildd.debian.org
sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zappa.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (s390) 17 May 2013 14:09 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (s390) 04 Aug 2013 09:36 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
Architecture: s390
-Get:1 http://ftp.us.debian.org unstable Release.gpg [1571 B]
-Get:2 http://ftp.us.debian.org unstable Release [203 kB]
-Get:3 http://incoming.debian.org unstable Release.gpg [1571 B]
-Get:4 http://incoming.debian.org buildd-unstable Release.gpg [1571 B]
-Get:5 http://incoming.debian.org unstable Release [203 kB]
-Get:6 http://ftp.us.debian.org unstable/main Sources [6729 kB]
-Get:7 http://incoming.debian.org buildd-unstable Release [109 kB]
-Get:8 http://incoming.debian.org unstable/main Sources [6729 kB]
-Get:9 http://ftp.us.debian.org unstable/contrib Sources [53.7 kB]
-Get:10 http://ftp.us.debian.org unstable/non-free Sources [103 kB]
-Get:11 http://ftp.us.debian.org unstable/main s390 Packages [6191 kB]
-Get:12 http://ftp.us.debian.org unstable/contrib s390 Packages [36.6 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:15 http://incoming.debian.org unstable/main s390 Packages [6191 kB]
-Get:16 http://incoming.debian.org unstable/contrib s390 Packages [36.6 kB]
-Get:17 http://incoming.debian.org buildd-unstable/main Sources [104 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib Sources [873 B]
-Get:19 http://incoming.debian.org buildd-unstable/non-free Sources [2683 B]
-Get:20 http://incoming.debian.org buildd-unstable/main s390 Packages [64.9 kB]
-Get:21 http://incoming.debian.org buildd-unstable/contrib s390 Packages [14 B]
-Fetched 26.9 MB in 57s (472 kB/s)
+Get:1 http://incoming.debian.org unstable InRelease [204 kB]
+Get:2 http://ftp.us.debian.org unstable InRelease [204 kB]
+Get:3 http://incoming.debian.org buildd-unstable InRelease [111 kB]
+Get:4 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:5 http://ftp.us.debian.org unstable/main Sources [6890 kB]
+Get:6 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:7 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:8 http://incoming.debian.org unstable/main s390 Packages [6227 kB]
+Get:9 http://ftp.us.debian.org unstable/contrib Sources [55.4 kB]
+Get:10 http://ftp.us.debian.org unstable/non-free Sources [105 kB]
+Get:11 http://ftp.us.debian.org unstable/main s390 Packages [6227 kB]
+Get:12 http://incoming.debian.org unstable/contrib s390 Packages [37.1 kB]
+Get:13 http://incoming.debian.org buildd-unstable/main Sources [100 kB]
+Get:14 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:15 http://incoming.debian.org buildd-unstable/non-free Sources [2795 B]
+Get:16 http://incoming.debian.org buildd-unstable/main s390 Packages [75.2 kB]
+Get:17 http://incoming.debian.org buildd-unstable/contrib s390 Packages [14 B]
+Get:18 http://ftp.us.debian.org unstable/contrib s390 Packages [37.1 kB]
+Fetched 27.3 MB in 56s (485 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -77,14 +74,13 @@ Download source files with APT
Reading package lists...
Building dependency tree...
-Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://ftp.us.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://ftp.us.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://ftp.us.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 1s (962 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 0s (1466 kB/s)
Download complete and in download only mode
Check arch
@@ -98,18 +94,16 @@ Check arch
Build-Depends: build-essential, fakeroot
Checking for already installed dependencies...
build-essential: already installed (11.6)
-fakeroot: already installed (1.18.4-2)
+fakeroot: already installed (1.19-2)
Checking for dependency conflicts...
Installing positive dependencies:
Reading package lists...
Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 27 not upgraded.
Removing negative dependencies:
Reading package lists...
Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 48 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 27 not upgraded.
Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -118,298 +112,315 @@ Checking correctness of dependencies...
Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
Checking for already installed dependencies...
-base-files: already installed (7.1)
+base-files: already installed (7.2)
base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-0.1)
-bsdutils: already installed (1:2.20.1-5.3)
+bash: already installed (4.2+dfsg-1)
+bsdutils: already installed (1:2.20.1-5.5)
coreutils: already installed (8.20-3)
dash: already installed (0.5.7-3)
debianutils: already installed (4.3.4)
diffutils: already installed (1:3.2-8)
dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.13-38)
+e2fsprogs: already installed (1.42.8-1)
+findutils: already installed (4.4.2-6)
+grep: already installed (2.14-2)
+gzip: already installed (1.6-1)
+hostname: already installed (3.13)
+libc-bin: already installed (2.17-7)
login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.3)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-20)
-sed: already installed (4.2.1-10)
+mount: already installed (2.20.1-5.5)
+ncurses-base: already installed (5.9+20130608-1)
+ncurses-bin: already installed (5.9+20130608-1)
+perl-base: already installed (5.14.2-21)
+sed: already installed (4.2.2-1)
sysvinit: already installed (2.88dsf-41)
sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-0.1)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (2.13-38)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
+tar: already installed (1.26+dfsg-6)
+util-linux: already installed (2.20.1-5.5)
+libc6-dev: already installed (2.17-7)
+gcc: already installed (4:4.6.4-2 >= 4:4.4.3 is satisfied)
+g++: already installed (4:4.6.4-2 >= 4:4.4.3 is satisfied)
make: already installed (3.81-8.2)
dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
debhelper: missing
-Using default version 9.20130516
+Using default version 9.20130630
cdbs: missing
r-base-dev: missing
Checking for dependency conflicts...
Installing positive dependencies: debhelper cdbs r-base-dev
Reading package lists...
Building dependency tree...
-Reading state information...
The following extra packages will be installed:
- bsdmainutils cpp-4.6 file fontconfig fontconfig-config fonts-dejavu-core
- g++-4.6 gcc-4.6 gcc-4.6-base gcc-4.8-base gettext gettext-base gfortran
- gfortran-4.6 groff-base html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6 libc6-dev
- libcairo2 libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1 libfreetype6
- libgettextpo-dev libgettextpo0 libgfortran3 libglib2.0-0 libice6 libjbig0
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5
- libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
- libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libstdc++6-4.6-dev libthai-data
- libthai0 libtiff5 libtinfo-dev libtinfo5 libunistring0 libx11-6 libx11-data
- libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
- libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf r-base-core
- tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g
- zlib1g-dev
+ bsdmainutils file fontconfig fontconfig-config fonts-dejavu-core
+ gcc-4.8-base gettext gettext-base gfortran gfortran-4.6 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgcc1 libgfortran3 libgl1-mesa-glx libglapi-mesa
+ libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8
+ libjpeg8-dev liblapack-dev liblapack3 libmagic1 libncurses5-dev
+ libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
+ libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
+ libpng12-dev libreadline-dev libreadline6-dev libsm6 libstdc++6 libthai-data
+ libthai0 libtiff5 libtinfo-dev libudev0 libunistring0 libwayland-client0
+ libwayland-server0 libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0
+ libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1
+ libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1
+ libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core tcl8.5 tk8.5
+ ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make
- g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-4.6-multilib
- libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg libquadmath-dbg libmudflap0-dbg
- libcloog-ppl0 libppl-c2 libppl7 gettext-doc gfortran-multilib gfortran-doc
- gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff glibc-doc
- ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp
- ttf-arphic-gkai00mp ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc
+ gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc
+ libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
+ ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint manpages-dev libglib2.0-data
- shared-mime-info libgpm2 xml-core libmail-sendmail-perl r-recommended
- r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
- fonts-dejavu-core gcc-4.8-base gettext gettext-base gfortran gfortran-4.6
- groff-base html2text intltool-debian libasprintf-dev libasprintf0c2
- libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi6 libfontconfig1 libfreetype6 libgettextpo-dev libgettextpo0
- libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
- zlib1g-dev
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.6 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0
+ libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
+ libtinfo-dev libudev0 libunistring0 libwayland-client0 libwayland-server0
+ libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0
+ libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1
+ libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6
+ libxxf86vm1 man-db po-debconf r-base-core r-base-dev tcl8.5 tk8.5
+ ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-dev-bin libc6 libc6-dev
- libncurses5 libstdc++6-4.6-dev libtinfo5 ncurses-bin zlib1g
-12 upgraded, 84 newly installed, 0 to remove and 36 not upgraded.
-Need to get 76.4 MB of archives.
-After this operation, 117 MB of additional disk space will be used.
-Get:1 http://ftp.us.debian.org/debian/ unstable/main libc6-dev s390 2.17-3 [2826 kB]
-Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libcroco3 s390 0.6.8-2 [129 kB]
-Get:3 http://ftp.us.debian.org/debian/ unstable/main libc-dev-bin s390 2.17-3 [232 kB]
-Get:4 http://ftp.us.debian.org/debian/ unstable/main libc6 s390 2.17-3 [4509 kB]
-Get:5 http://ftp.us.debian.org/debian/ unstable/main libtinfo5 s390 5.9+20130504-1 [299 kB]
-Get:6 http://ftp.us.debian.org/debian/ unstable/main libncurses5 s390 5.9+20130504-1 [116 kB]
-Get:7 http://ftp.us.debian.org/debian/ unstable/main ncurses-bin s390 5.9+20130504-1 [365 kB]
-Get:8 http://ftp.us.debian.org/debian/ unstable/main zlib1g s390 1:1.2.8.dfsg-1 [92.8 kB]
-Get:9 http://ftp.us.debian.org/debian/ unstable/main libpipeline1 s390 1.2.3-1 [41.2 kB]
-Get:10 http://ftp.us.debian.org/debian/ unstable/main groff-base s390 1.22.2-2 [713 kB]
-Get:11 http://ftp.us.debian.org/debian/ unstable/main bsdmainutils s390 9.0.5 [213 kB]
-Get:12 http://ftp.us.debian.org/debian/ unstable/main man-db s390 2.6.3-6 [884 kB]
-Get:13 http://ftp.us.debian.org/debian/ unstable/main libasprintf0c2 s390 0.18.1.1-10 [27.2 kB]
-Get:14 http://ftp.us.debian.org/debian/ unstable/main libmagic1 s390 1:5.14-1 [219 kB]
-Get:15 http://ftp.us.debian.org/debian/ unstable/main libpcre3 s390 1:8.31-2 [253 kB]
-Get:16 http://ftp.us.debian.org/debian/ unstable/main libxml2 s390 2.8.0+dfsg1-7+nmu1 [892 kB]
-Get:17 http://ftp.us.debian.org/debian/ unstable/main libexpat1 s390 2.1.0-3 [140 kB]
-Get:18 http://ftp.us.debian.org/debian/ unstable/main libfreetype6 s390 2.4.9-1.1 [449 kB]
-Get:19 http://ftp.us.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:20 http://ftp.us.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:21 http://ftp.us.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:22 http://ftp.us.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:23 http://ftp.us.debian.org/debian/ unstable/main libfontconfig1 s390 2.9.0-7.1 [303 kB]
-Get:24 http://ftp.us.debian.org/debian/ unstable/main libpixman-1-0 s390 0.26.0-4 [395 kB]
-Get:25 http://ftp.us.debian.org/debian/ unstable/main libpng12-0 s390 1.2.49-4 [192 kB]
-Get:26 http://ftp.us.debian.org/debian/ unstable/main libxau6 s390 1:1.0.7-1 [18.6 kB]
-Get:27 http://ftp.us.debian.org/debian/ unstable/main libxdmcp6 s390 1:1.1.1-1 [26.6 kB]
-Get:28 http://ftp.us.debian.org/debian/ unstable/main libxcb1 s390 1.8.1-2 [53.4 kB]
-Get:29 http://ftp.us.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:30 http://ftp.us.debian.org/debian/ unstable/main libx11-6 s390 2:1.5.0-1 [904 kB]
-Get:31 http://ftp.us.debian.org/debian/ unstable/main libxcb-render0 s390 1.8.1-2 [19.1 kB]
-Get:32 http://ftp.us.debian.org/debian/ unstable/main libxcb-shm0 s390 1.8.1-2 [10.4 kB]
-Get:33 http://ftp.us.debian.org/debian/ unstable/main libxext6 s390 2:1.3.1-2 [55.2 kB]
-Get:34 http://ftp.us.debian.org/debian/ unstable/main libxrender1 s390 1:0.9.7-1 [32.1 kB]
-Get:35 http://ftp.us.debian.org/debian/ unstable/main libcairo2 s390 1.12.14-4 [1012 kB]
-Get:36 http://ftp.us.debian.org/debian/ unstable/main libffi6 s390 3.0.13-4 [20.5 kB]
-Get:37 http://ftp.us.debian.org/debian/ unstable/main libglib2.0-0 s390 2.36.1-2build1 [1994 kB]
-Get:38 http://ftp.us.debian.org/debian/ unstable/main libdatrie1 s390 0.2.6-2 [30.5 kB]
-Get:39 http://ftp.us.debian.org/debian/ unstable/main libunistring0 s390 0.9.3-5 [433 kB]
-Get:40 http://ftp.us.debian.org/debian/ unstable/main libgettextpo0 s390 0.18.1.1-10 [147 kB]
-Get:41 http://ftp.us.debian.org/debian/ unstable/main gcc-4.8-base s390 4.8.0-7 [148 kB]
-Get:42 http://ftp.us.debian.org/debian/ unstable/main libgfortran3 s390 4.8.0-7 [293 kB]
-Get:43 http://ftp.us.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:44 http://ftp.us.debian.org/debian/ unstable/main libice6 s390 2:1.0.8-2 [63.6 kB]
-Get:45 http://ftp.us.debian.org/debian/ unstable/main libjpeg8 s390 8d-1 [141 kB]
-Get:46 http://ftp.us.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:47 http://ftp.us.debian.org/debian/ unstable/main libthai0 s390 0.1.19-2 [43.7 kB]
-Get:48 http://ftp.us.debian.org/debian/ unstable/main libxft2 s390 2.3.1-1 [62.8 kB]
-Get:49 http://ftp.us.debian.org/debian/ unstable/main fontconfig s390 2.9.0-7.1 [350 kB]
-Get:50 http://ftp.us.debian.org/debian/ unstable/main libpango1.0-0 s390 1.30.0-1 [469 kB]
-Get:51 http://ftp.us.debian.org/debian/ unstable/main libpaper1 s390 1.1.24+nmu2 [22.1 kB]
-Get:52 http://ftp.us.debian.org/debian/ unstable/main libpcrecpp0 s390 1:8.31-2 [129 kB]
-Get:53 http://ftp.us.debian.org/debian/ unstable/main libsm6 s390 2:1.2.1-2 [35.0 kB]
-Get:54 http://ftp.us.debian.org/debian/ unstable/main libjbig0 s390 2.0-2 [33.8 kB]
-Get:55 http://ftp.us.debian.org/debian/ unstable/main libtiff5 s390 4.0.2-6 [249 kB]
-Get:56 http://ftp.us.debian.org/debian/ unstable/main libxss1 s390 1:1.2.2-1 [17.6 kB]
-Get:57 http://ftp.us.debian.org/debian/ unstable/main libxt6 s390 1:1.1.3-1 [210 kB]
-Get:58 http://ftp.us.debian.org/debian/ unstable/main libmpc3 s390 1.0.1-1 [44.9 kB]
-Get:59 http://ftp.us.debian.org/debian/ unstable/main file s390 1:5.14-1 [54.4 kB]
-Get:60 http://ftp.us.debian.org/debian/ unstable/main gettext-base s390 0.18.1.1-10 [152 kB]
-Get:61 http://ftp.us.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:62 http://ftp.us.debian.org/debian/ unstable/main libstdc++6-4.6-dev s390 4.6.4-2 [1677 kB]
-Get:63 http://ftp.us.debian.org/debian/ unstable/main g++-4.6 s390 4.6.4-2 [5806 kB]
-Get:64 http://ftp.us.debian.org/debian/ unstable/main gcc-4.6 s390 4.6.4-2 [4104 kB]
-Get:65 http://ftp.us.debian.org/debian/ unstable/main cpp-4.6 s390 4.6.4-2 [3775 kB]
-Get:66 http://ftp.us.debian.org/debian/ unstable/main gcc-4.6-base s390 4.6.4-2 [142 kB]
-Get:67 http://ftp.us.debian.org/debian/ unstable/main html2text s390 1.3.2a-15 [101 kB]
-Get:68 http://ftp.us.debian.org/debian/ unstable/main libasprintf-dev s390 0.18.1.1-10 [27.1 kB]
-Get:69 http://ftp.us.debian.org/debian/ unstable/main libgettextpo-dev s390 0.18.1.1-10 [182 kB]
-Get:70 http://ftp.us.debian.org/debian/ unstable/main gettext s390 0.18.1.1-10 [1800 kB]
-Get:71 http://ftp.us.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:72 http://ftp.us.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:73 http://ftp.us.debian.org/debian/ unstable/main debhelper all 9.20130516 [708 kB]
-Get:74 http://ftp.us.debian.org/debian/ unstable/main gfortran-4.6 s390 4.6.4-2 [4443 kB]
-Get:75 http://ftp.us.debian.org/debian/ unstable/main gfortran s390 4:4.6.3-8 [1124 B]
-Get:76 http://ftp.us.debian.org/debian/ unstable/main libblas3 s390 1.2.20110419-5 [192 kB]
-Get:77 http://ftp.us.debian.org/debian/ unstable/main libblas-dev s390 1.2.20110419-5 [203 kB]
-Get:78 http://ftp.us.debian.org/debian/ unstable/main libbz2-dev s390 1.0.6-4 [35.9 kB]
-Get:79 http://ftp.us.debian.org/debian/ unstable/main libjpeg8-dev s390 8d-1 [243 kB]
-Get:80 http://ftp.us.debian.org/debian/ unstable/main liblapack3 s390 3.4.2+dfsg-1 [1733 kB]
-Get:81 http://ftp.us.debian.org/debian/ unstable/main liblapack-dev s390 3.4.2+dfsg-1 [2037 kB]
-Get:82 http://ftp.us.debian.org/debian/ unstable/main libtinfo-dev s390 5.9+20130504-1 [116 kB]
-Get:83 http://ftp.us.debian.org/debian/ unstable/main libncurses5-dev s390 5.9+20130504-1 [215 kB]
-Get:84 http://ftp.us.debian.org/debian/ unstable/main libpaper-utils s390 1.1.24+nmu2 [18.5 kB]
-Get:85 http://ftp.us.debian.org/debian/ unstable/main libpcre3-dev s390 1:8.31-2 [358 kB]
-Get:86 http://ftp.us.debian.org/debian/ unstable/main zlib1g-dev s390 1:1.2.8.dfsg-1 [217 kB]
-Get:87 http://ftp.us.debian.org/debian/ unstable/main libpng12-dev s390 1.2.49-4 [270 kB]
-Get:88 http://ftp.us.debian.org/debian/ unstable/main libreadline6-dev s390 6.2+dfsg-0.1 [186 kB]
-Get:89 http://ftp.us.debian.org/debian/ unstable/main libreadline-dev s390 6.2+dfsg-0.1 [896 B]
-Get:90 http://ftp.us.debian.org/debian/ unstable/main zip s390 3.0-7 [349 kB]
-Get:91 http://ftp.us.debian.org/debian/ unstable/main unzip s390 6.0-9 [197 kB]
-Get:92 http://ftp.us.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:93 http://ftp.us.debian.org/debian/ unstable/main tcl8.5 s390 8.5.11-2 [1656 kB]
-Get:94 http://ftp.us.debian.org/debian/ unstable/main tk8.5 s390 8.5.11-2 [1203 kB]
-Get:95 http://ftp.us.debian.org/debian/ unstable/main r-base-core s390 3.0.1-1 [21.4 MB]
-Get:96 http://ftp.us.debian.org/debian/ unstable/main r-base-dev all 3.0.1-1 [3896 B]
+ gcc-4.8-base libgcc1 libgomp1 libstdc++6
+4 upgraded, 97 newly installed, 0 to remove and 23 not upgraded.
+Need to get 54.8 MB of archives.
+After this operation, 121 MB of additional disk space will be used.
+Get:1 http://ftp.us.debian.org/debian/ unstable/main libgomp1 s390 4.8.1-8 [33.2 kB]
+Get:2 http://ftp.us.debian.org/debian/ unstable/main gcc-4.8-base s390 4.8.1-8 [150 kB]
+Get:3 http://ftp.us.debian.org/debian/ unstable/main libstdc++6 s390 4.8.1-8 [386 kB]
+Get:4 http://ftp.us.debian.org/debian/ unstable/main libgcc1 s390 1:4.8.1-8 [32.3 kB]
+Get:5 http://ftp.us.debian.org/debian/ unstable/main libpipeline1 s390 1.2.4-1 [42.3 kB]
+Get:6 http://ftp.us.debian.org/debian/ unstable/main libudev0 s390 175-7.2 [128 kB]
+Get:7 http://ftp.us.debian.org/debian/ unstable/main groff-base s390 1.22.2-3 [712 kB]
+Get:8 http://ftp.us.debian.org/debian/ unstable/main bsdmainutils s390 9.0.5 [213 kB]
+Get:9 http://ftp.us.debian.org/debian/ unstable/main man-db s390 2.6.5-2 [965 kB]
+Get:10 http://ftp.us.debian.org/debian/ unstable/main libasprintf0c2 s390 0.18.3-1 [30.0 kB]
+Get:11 http://ftp.us.debian.org/debian/ unstable/main libmagic1 s390 1:5.14-2 [219 kB]
+Get:12 http://ftp.us.debian.org/debian/ unstable/main libxml2 s390 2.9.1+dfsg1-2 [908 kB]
+Get:13 http://ftp.us.debian.org/debian/ unstable/main libdrm2 s390 2.4.45-3 [469 kB]
+Get:14 http://ftp.us.debian.org/debian/ unstable/main libglapi-mesa s390 9.1.4-1 [65.7 kB]
+Get:15 http://ftp.us.debian.org/debian/ unstable/main libxau6 s390 1:1.0.8-1 [21.0 kB]
+Get:16 http://ftp.us.debian.org/debian/ unstable/main libxdmcp6 s390 1:1.1.1-1 [26.6 kB]
+Get:17 http://ftp.us.debian.org/debian/ unstable/main libxcb1 s390 1.9.1-3 [53.8 kB]
+Get:18 http://ftp.us.debian.org/debian/ unstable/main libxcb-dri2-0 s390 1.9.1-3 [13.2 kB]
+Get:19 http://ftp.us.debian.org/debian/ unstable/main libgbm1 s390 9.1.4-1 [337 kB]
+Get:20 http://ftp.us.debian.org/debian/ unstable/main libffi6 s390 3.0.13-4 [20.5 kB]
+Get:21 http://ftp.us.debian.org/debian/ unstable/main libwayland-client0 s390 1.1.0-2 [23.6 kB]
+Get:22 http://ftp.us.debian.org/debian/ unstable/main libwayland-server0 s390 1.1.0-2 [33.8 kB]
+Get:23 http://ftp.us.debian.org/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:24 http://ftp.us.debian.org/debian/ unstable/main libx11-6 s390 2:1.6.0-1 [921 kB]
+Get:25 http://ftp.us.debian.org/debian/ unstable/main libx11-xcb1 s390 2:1.6.0-1 [153 kB]
+Get:26 http://ftp.us.debian.org/debian/ unstable/main libxcb-render0 s390 1.9.1-3 [19.6 kB]
+Get:27 http://ftp.us.debian.org/debian/ unstable/main libxcb-shape0 s390 1.9.1-3 [11.6 kB]
+Get:28 http://ftp.us.debian.org/debian/ unstable/main libxcb-xfixes0 s390 1.9.1-3 [15.1 kB]
+Get:29 http://ftp.us.debian.org/debian/ unstable/main libegl1-mesa s390 9.1.4-1 [80.4 kB]
+Get:30 http://ftp.us.debian.org/debian/ unstable/main libexpat1 s390 2.1.0-4 [139 kB]
+Get:31 http://ftp.us.debian.org/debian/ unstable/main libfreetype6 s390 2.4.9-1.1 [449 kB]
+Get:32 http://ftp.us.debian.org/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:33 http://ftp.us.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:34 http://ftp.us.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:35 http://ftp.us.debian.org/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:36 http://ftp.us.debian.org/debian/ unstable/main libfontconfig1 s390 2.10.2-2 [324 kB]
+Get:37 http://ftp.us.debian.org/debian/ unstable/main libxcb-glx0 s390 1.9.1-3 [34.2 kB]
+Get:38 http://ftp.us.debian.org/debian/ unstable/main libxfixes3 s390 1:5.0.1-1 [22.6 kB]
+Get:39 http://ftp.us.debian.org/debian/ unstable/main libxdamage1 s390 1:1.1.4-1 [15.2 kB]
+Get:40 http://ftp.us.debian.org/debian/ unstable/main libxext6 s390 2:1.3.2-1 [56.4 kB]
+Get:41 http://ftp.us.debian.org/debian/ unstable/main libxxf86vm1 s390 1:1.1.2-1+deb7u1 [19.7 kB]
+Get:42 http://ftp.us.debian.org/debian/ unstable/main libgl1-mesa-glx s390 9.1.4-1 [139 kB]
+Get:43 http://ftp.us.debian.org/debian/ unstable/main libpixman-1-0 s390 0.30.0-3 [440 kB]
+Get:44 http://ftp.us.debian.org/debian/ unstable/main libpng12-0 s390 1.2.49-4 [192 kB]
+Get:45 http://ftp.us.debian.org/debian/ unstable/main libxcb-shm0 s390 1.9.1-3 [10.9 kB]
+Get:46 http://ftp.us.debian.org/debian/ unstable/main libxrender1 s390 1:0.9.8-1 [32.9 kB]
+Get:47 http://ftp.us.debian.org/debian/ unstable/main libcairo2 s390 1.12.14-5 [1052 kB]
+Get:48 http://ftp.us.debian.org/debian/ unstable/main libglib2.0-0 s390 2.36.3-3 [2005 kB]
+Get:49 http://ftp.us.debian.org/debian/ unstable/main libcroco3 s390 0.6.8-2 [129 kB]
+Get:50 http://ftp.us.debian.org/debian/ unstable/main libdatrie1 s390 0.2.6-2 [30.5 kB]
+Get:51 http://ftp.us.debian.org/debian/ unstable/main libgfortran3 s390 4.8.1-8 [290 kB]
+Get:52 http://ftp.us.debian.org/debian/ unstable/main libgraphite2-3 s390 1.2.3-1 [65.1 kB]
+Get:53 http://ftp.us.debian.org/debian/ unstable/main libharfbuzz0a s390 0.9.19-1 [458 kB]
+Get:54 http://ftp.us.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:55 http://ftp.us.debian.org/debian/ unstable/main libice6 s390 2:1.0.8-2 [63.6 kB]
+Get:56 http://ftp.us.debian.org/debian/ unstable/main libjpeg8 s390 8d-1 [141 kB]
+Get:57 http://ftp.us.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:58 http://ftp.us.debian.org/debian/ unstable/main libthai0 s390 0.1.19-2 [43.7 kB]
+Get:59 http://ftp.us.debian.org/debian/ unstable/main fontconfig s390 2.10.2-2 [377 kB]
+Get:60 http://ftp.us.debian.org/debian/ unstable/main libpango-1.0-0 s390 1.32.5-5+b1 [260 kB]
+Get:61 http://ftp.us.debian.org/debian/ unstable/main libpangoft2-1.0-0 s390 1.32.5-5+b1 [187 kB]
+Get:62 http://ftp.us.debian.org/debian/ unstable/main libpangocairo-1.0-0 s390 1.32.5-5+b1 [174 kB]
+Get:63 http://ftp.us.debian.org/debian/ unstable/main libpaper1 s390 1.1.24+nmu2 [22.1 kB]
+Get:64 http://ftp.us.debian.org/debian/ unstable/main libpcrecpp0 s390 1:8.31-2 [129 kB]
+Get:65 http://ftp.us.debian.org/debian/ unstable/main libsm6 s390 2:1.2.1-2 [35.0 kB]
+Get:66 http://ftp.us.debian.org/debian/ unstable/main libjbig0 s390 2.0-2 [33.8 kB]
+Get:67 http://ftp.us.debian.org/debian/ unstable/main libtiff5 s390 4.0.3-1 [251 kB]
+Get:68 http://ftp.us.debian.org/debian/ unstable/main libunistring0 s390 0.9.3-5 [433 kB]
+Get:69 http://ftp.us.debian.org/debian/ unstable/main libxft2 s390 2.3.1-1 [62.8 kB]
+Get:70 http://ftp.us.debian.org/debian/ unstable/main libxss1 s390 1:1.2.2-1 [17.6 kB]
+Get:71 http://ftp.us.debian.org/debian/ unstable/main libxt6 s390 1:1.1.3-1+deb7u1 [210 kB]
+Get:72 http://ftp.us.debian.org/debian/ unstable/main file s390 1:5.14-2 [54.4 kB]
+Get:73 http://ftp.us.debian.org/debian/ unstable/main gettext-base s390 0.18.3-1 [161 kB]
+Get:74 http://ftp.us.debian.org/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:75 http://ftp.us.debian.org/debian/ unstable/main gettext s390 0.18.3-1 [1913 kB]
+Get:76 http://ftp.us.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:77 http://ftp.us.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:78 http://ftp.us.debian.org/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:79 http://ftp.us.debian.org/debian/ unstable/main gfortran-4.6 s390 4.6.4-4 [4416 kB]
+Get:80 http://ftp.us.debian.org/debian/ unstable/main gfortran s390 4:4.6.4-2 [1124 B]
+Get:81 http://ftp.us.debian.org/debian/ unstable/main libblas3 s390 1.2.20110419-5 [192 kB]
+Get:82 http://ftp.us.debian.org/debian/ unstable/main libblas-dev s390 1.2.20110419-5 [203 kB]
+Get:83 http://ftp.us.debian.org/debian/ unstable/main libbz2-dev s390 1.0.6-4 [35.9 kB]
+Get:84 http://ftp.us.debian.org/debian/ unstable/main libjpeg8-dev s390 8d-1 [243 kB]
+Get:85 http://ftp.us.debian.org/debian/ unstable/main liblapack3 s390 3.4.2+dfsg-1 [1733 kB]
+Get:86 http://ftp.us.debian.org/debian/ unstable/main liblapack-dev s390 3.4.2+dfsg-1 [2037 kB]
+Get:87 http://ftp.us.debian.org/debian/ unstable/main libtinfo-dev s390 5.9+20130608-1 [116 kB]
+Get:88 http://ftp.us.debian.org/debian/ unstable/main libncurses5-dev s390 5.9+20130608-1 [216 kB]
+Get:89 http://ftp.us.debian.org/debian/ unstable/main libpaper-utils s390 1.1.24+nmu2 [18.5 kB]
+Get:90 http://ftp.us.debian.org/debian/ unstable/main libpcre3-dev s390 1:8.31-2 [358 kB]
+Get:91 http://ftp.us.debian.org/debian/ unstable/main zlib1g-dev s390 1:1.2.8.dfsg-1 [217 kB]
+Get:92 http://ftp.us.debian.org/debian/ unstable/main libpng12-dev s390 1.2.49-4 [270 kB]
+Get:93 http://ftp.us.debian.org/debian/ unstable/main libreadline6-dev s390 6.2+dfsg-0.1 [186 kB]
+Get:94 http://ftp.us.debian.org/debian/ unstable/main libreadline-dev s390 6.2+dfsg-0.1 [896 B]
+Get:95 http://ftp.us.debian.org/debian/ unstable/main zip s390 3.0-7 [349 kB]
+Get:96 http://ftp.us.debian.org/debian/ unstable/main unzip s390 6.0-9 [197 kB]
+Get:97 http://ftp.us.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:98 http://ftp.us.debian.org/debian/ unstable/main tcl8.5 s390 8.5.14-2 [1670 kB]
+Get:99 http://ftp.us.debian.org/debian/ unstable/main tk8.5 s390 8.5.14-2 [1213 kB]
+Get:100 http://ftp.us.debian.org/debian/ unstable/main r-base-core s390 3.0.1-6 [21.4 MB]
+Get:101 http://ftp.us.debian.org/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 76.4 MB in 35s (2125 kB/s)
-(Reading database ... 10855 files and directories currently installed.)
-Preparing to replace libc6-dev:s390 2.13-38 (using .../libc6-dev_2.17-3_s390.deb) ...
-Unpacking replacement libc6-dev:s390 ...
-Preparing to replace libc-dev-bin 2.13-38 (using .../libc-dev-bin_2.17-3_s390.deb) ...
-Unpacking replacement libc-dev-bin ...
-Preparing to replace libc6:s390 2.13-38 (using .../archives/libc6_2.17-3_s390.deb) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Unpacking replacement libc6:s390 ...
-Setting up libc6:s390 (2.17-3) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Nothing to restart.
-(Reading database ... 10877 files and directories currently installed.)
-Preparing to replace libtinfo5:s390 5.9-10 (using .../libtinfo5_5.9+20130504-1_s390.deb) ...
-Unpacking replacement libtinfo5:s390 ...
-Setting up libtinfo5:s390 (5.9+20130504-1) ...
-(Reading database ... 10877 files and directories currently installed.)
-Preparing to replace libncurses5:s390 5.9-10 (using .../libncurses5_5.9+20130504-1_s390.deb) ...
-Unpacking replacement libncurses5:s390 ...
-Setting up libncurses5:s390 (5.9+20130504-1) ...
-(Reading database ... 10877 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_s390.deb) ...
-Unpacking replacement ncurses-bin ...
-Setting up ncurses-bin (5.9+20130504-1) ...
-(Reading database ... 10875 files and directories currently installed.)
-Preparing to replace zlib1g:s390 1:1.2.7.dfsg-13 (using .../zlib1g_1%3a1.2.8.dfsg-1_s390.deb) ...
-Unpacking replacement zlib1g:s390 ...
-Setting up zlib1g:s390 (1:1.2.8.dfsg-1) ...
+Fetched 54.8 MB in 22s (2390 kB/s)
+(Reading database ... 10959 files and directories currently installed.)
+Preparing to replace libgomp1:s390 4.8.1-5 (using .../libgomp1_4.8.1-8_s390.deb) ...
+Unpacking replacement libgomp1:s390 ...
+Preparing to replace gcc-4.8-base:s390 4.8.1-5 (using .../gcc-4.8-base_4.8.1-8_s390.deb) ...
+Unpacking replacement gcc-4.8-base:s390 ...
+Setting up gcc-4.8-base:s390 (4.8.1-8) ...
+(Reading database ... 10959 files and directories currently installed.)
+Preparing to replace libstdc++6:s390 4.8.1-5 (using .../libstdc++6_4.8.1-8_s390.deb) ...
+Unpacking replacement libstdc++6:s390 ...
+Preparing to replace libgcc1:s390 1:4.8.1-5 (using .../libgcc1_1%3a4.8.1-8_s390.deb) ...
+Unpacking replacement libgcc1:s390 ...
+Setting up libgcc1:s390 (1:4.8.1-8) ...
+Setting up libstdc++6:s390 (4.8.1-8) ...
+Processing triggers for libc-bin ...
Selecting previously unselected package libpipeline1:s390.
-(Reading database ... 10875 files and directories currently installed.)
-Unpacking libpipeline1:s390 (from .../libpipeline1_1.2.3-1_s390.deb) ...
+(Reading database ... 10959 files and directories currently installed.)
+Unpacking libpipeline1:s390 (from .../libpipeline1_1.2.4-1_s390.deb) ...
+Selecting previously unselected package libudev0:s390.
+Unpacking libudev0:s390 (from .../libudev0_175-7.2_s390.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_s390.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_s390.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_s390.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_s390.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_s390.deb) ...
Selecting previously unselected package libasprintf0c2:s390.
-Unpacking libasprintf0c2:s390 (from .../libasprintf0c2_0.18.1.1-10_s390.deb) ...
+Unpacking libasprintf0c2:s390 (from .../libasprintf0c2_0.18.3-1_s390.deb) ...
Selecting previously unselected package libmagic1:s390.
-Unpacking libmagic1:s390 (from .../libmagic1_1%3a5.14-1_s390.deb) ...
-Selecting previously unselected package libpcre3:s390.
-Unpacking libpcre3:s390 (from .../libpcre3_1%3a8.31-2_s390.deb) ...
+Unpacking libmagic1:s390 (from .../libmagic1_1%3a5.14-2_s390.deb) ...
Selecting previously unselected package libxml2:s390.
-Unpacking libxml2:s390 (from .../libxml2_2.8.0+dfsg1-7+nmu1_s390.deb) ...
+Unpacking libxml2:s390 (from .../libxml2_2.9.1+dfsg1-2_s390.deb) ...
+Selecting previously unselected package libdrm2:s390.
+Unpacking libdrm2:s390 (from .../libdrm2_2.4.45-3_s390.deb) ...
+Selecting previously unselected package libglapi-mesa:s390.
+Unpacking libglapi-mesa:s390 (from .../libglapi-mesa_9.1.4-1_s390.deb) ...
+Selecting previously unselected package libxau6:s390.
+Unpacking libxau6:s390 (from .../libxau6_1%3a1.0.8-1_s390.deb) ...
+Selecting previously unselected package libxdmcp6:s390.
+Unpacking libxdmcp6:s390 (from .../libxdmcp6_1%3a1.1.1-1_s390.deb) ...
+Selecting previously unselected package libxcb1:s390.
+Unpacking libxcb1:s390 (from .../libxcb1_1.9.1-3_s390.deb) ...
+Selecting previously unselected package libxcb-dri2-0:s390.
+Unpacking libxcb-dri2-0:s390 (from .../libxcb-dri2-0_1.9.1-3_s390.deb) ...
+Selecting previously unselected package libgbm1:s390.
+Unpacking libgbm1:s390 (from .../libgbm1_9.1.4-1_s390.deb) ...
+Selecting previously unselected package libffi6:s390.
+Unpacking libffi6:s390 (from .../libffi6_3.0.13-4_s390.deb) ...
+Selecting previously unselected package libwayland-client0:s390.
+Unpacking libwayland-client0:s390 (from .../libwayland-client0_1.1.0-2_s390.deb) ...
+Selecting previously unselected package libwayland-server0:s390.
+Unpacking libwayland-server0:s390 (from .../libwayland-server0_1.1.0-2_s390.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:s390.
+Unpacking libx11-6:s390 (from .../libx11-6_2%3a1.6.0-1_s390.deb) ...
+Selecting previously unselected package libx11-xcb1:s390.
+Unpacking libx11-xcb1:s390 (from .../libx11-xcb1_2%3a1.6.0-1_s390.deb) ...
+Selecting previously unselected package libxcb-render0:s390.
+Unpacking libxcb-render0:s390 (from .../libxcb-render0_1.9.1-3_s390.deb) ...
+Selecting previously unselected package libxcb-shape0:s390.
+Unpacking libxcb-shape0:s390 (from .../libxcb-shape0_1.9.1-3_s390.deb) ...
+Selecting previously unselected package libxcb-xfixes0:s390.
+Unpacking libxcb-xfixes0:s390 (from .../libxcb-xfixes0_1.9.1-3_s390.deb) ...
+Selecting previously unselected package libegl1-mesa:s390.
+Unpacking libegl1-mesa:s390 (from .../libegl1-mesa_9.1.4-1_s390.deb) ...
Selecting previously unselected package libexpat1:s390.
-Unpacking libexpat1:s390 (from .../libexpat1_2.1.0-3_s390.deb) ...
+Unpacking libexpat1:s390 (from .../libexpat1_2.1.0-4_s390.deb) ...
Selecting previously unselected package libfreetype6:s390.
Unpacking libfreetype6:s390 (from .../libfreetype6_2.4.9-1.1_s390.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:s390.
-Unpacking libfontconfig1:s390 (from .../libfontconfig1_2.9.0-7.1_s390.deb) ...
+Unpacking libfontconfig1:s390 (from .../libfontconfig1_2.10.2-2_s390.deb) ...
+Selecting previously unselected package libxcb-glx0:s390.
+Unpacking libxcb-glx0:s390 (from .../libxcb-glx0_1.9.1-3_s390.deb) ...
+Selecting previously unselected package libxfixes3:s390.
+Unpacking libxfixes3:s390 (from .../libxfixes3_1%3a5.0.1-1_s390.deb) ...
+Selecting previously unselected package libxdamage1:s390.
+Unpacking libxdamage1:s390 (from .../libxdamage1_1%3a1.1.4-1_s390.deb) ...
+Selecting previously unselected package libxext6:s390.
+Unpacking libxext6:s390 (from .../libxext6_2%3a1.3.2-1_s390.deb) ...
+Selecting previously unselected package libxxf86vm1:s390.
+Unpacking libxxf86vm1:s390 (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_s390.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:s390.
+Unpacking libgl1-mesa-glx:s390 (from .../libgl1-mesa-glx_9.1.4-1_s390.deb) ...
Selecting previously unselected package libpixman-1-0:s390.
-Unpacking libpixman-1-0:s390 (from .../libpixman-1-0_0.26.0-4_s390.deb) ...
+Unpacking libpixman-1-0:s390 (from .../libpixman-1-0_0.30.0-3_s390.deb) ...
Selecting previously unselected package libpng12-0:s390.
Unpacking libpng12-0:s390 (from .../libpng12-0_1.2.49-4_s390.deb) ...
-Selecting previously unselected package libxau6:s390.
-Unpacking libxau6:s390 (from .../libxau6_1%3a1.0.7-1_s390.deb) ...
-Selecting previously unselected package libxdmcp6:s390.
-Unpacking libxdmcp6:s390 (from .../libxdmcp6_1%3a1.1.1-1_s390.deb) ...
-Selecting previously unselected package libxcb1:s390.
-Unpacking libxcb1:s390 (from .../libxcb1_1.8.1-2_s390.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:s390.
-Unpacking libx11-6:s390 (from .../libx11-6_2%3a1.5.0-1_s390.deb) ...
-Selecting previously unselected package libxcb-render0:s390.
-Unpacking libxcb-render0:s390 (from .../libxcb-render0_1.8.1-2_s390.deb) ...
Selecting previously unselected package libxcb-shm0:s390.
-Unpacking libxcb-shm0:s390 (from .../libxcb-shm0_1.8.1-2_s390.deb) ...
-Selecting previously unselected package libxext6:s390.
-Unpacking libxext6:s390 (from .../libxext6_2%3a1.3.1-2_s390.deb) ...
+Unpacking libxcb-shm0:s390 (from .../libxcb-shm0_1.9.1-3_s390.deb) ...
Selecting previously unselected package libxrender1:s390.
-Unpacking libxrender1:s390 (from .../libxrender1_1%3a0.9.7-1_s390.deb) ...
+Unpacking libxrender1:s390 (from .../libxrender1_1%3a0.9.8-1_s390.deb) ...
Selecting previously unselected package libcairo2:s390.
-Unpacking libcairo2:s390 (from .../libcairo2_1.12.14-4_s390.deb) ...
-Selecting previously unselected package libffi6:s390.
-Unpacking libffi6:s390 (from .../libffi6_3.0.13-4_s390.deb) ...
+Unpacking libcairo2:s390 (from .../libcairo2_1.12.14-5_s390.deb) ...
Selecting previously unselected package libglib2.0-0:s390.
-Unpacking libglib2.0-0:s390 (from .../libglib2.0-0_2.36.1-2build1_s390.deb) ...
+Unpacking libglib2.0-0:s390 (from .../libglib2.0-0_2.36.3-3_s390.deb) ...
Selecting previously unselected package libcroco3:s390.
Unpacking libcroco3:s390 (from .../libcroco3_0.6.8-2_s390.deb) ...
Selecting previously unselected package libdatrie1:s390.
Unpacking libdatrie1:s390 (from .../libdatrie1_0.2.6-2_s390.deb) ...
-Selecting previously unselected package libunistring0:s390.
-Unpacking libunistring0:s390 (from .../libunistring0_0.9.3-5_s390.deb) ...
-Selecting previously unselected package libgettextpo0:s390.
-Unpacking libgettextpo0:s390 (from .../libgettextpo0_0.18.1.1-10_s390.deb) ...
-Selecting previously unselected package gcc-4.8-base:s390.
-Unpacking gcc-4.8-base:s390 (from .../gcc-4.8-base_4.8.0-7_s390.deb) ...
Selecting previously unselected package libgfortran3:s390.
-Unpacking libgfortran3:s390 (from .../libgfortran3_4.8.0-7_s390.deb) ...
+Unpacking libgfortran3:s390 (from .../libgfortran3_4.8.1-8_s390.deb) ...
+Selecting previously unselected package libgraphite2-3:s390.
+Unpacking libgraphite2-3:s390 (from .../libgraphite2-3_1.2.3-1_s390.deb) ...
+Selecting previously unselected package libharfbuzz0a:s390.
+Unpacking libharfbuzz0a:s390 (from .../libharfbuzz0a_0.9.19-1_s390.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:s390.
@@ -420,12 +431,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:s390.
Unpacking libthai0:s390 (from .../libthai0_0.1.19-2_s390.deb) ...
-Selecting previously unselected package libxft2:s390.
-Unpacking libxft2:s390 (from .../libxft2_2.3.1-1_s390.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_s390.deb) ...
-Selecting previously unselected package libpango1.0-0:s390.
-Unpacking libpango1.0-0:s390 (from .../libpango1.0-0_1.30.0-1_s390.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_s390.deb) ...
+Selecting previously unselected package libpango-1.0-0:s390.
+Unpacking libpango-1.0-0:s390 (from .../libpango-1.0-0_1.32.5-5+b1_s390.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:s390.
+Unpacking libpangoft2-1.0-0:s390 (from .../libpangoft2-1.0-0_1.32.5-5+b1_s390.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:s390.
+Unpacking libpangocairo-1.0-0:s390 (from .../libpangocairo-1.0-0_1.32.5-5+b1_s390.deb) ...
Selecting previously unselected package libpaper1:s390.
Unpacking libpaper1:s390 (from .../libpaper1_1.1.24+nmu2_s390.deb) ...
Selecting previously unselected package libpcrecpp0:s390.
@@ -435,47 +448,33 @@ Unpacking libsm6:s390 (from .../libsm6_2%3a1.2.1-2_s390.deb) ...
Selecting previously unselected package libjbig0:s390.
Unpacking libjbig0:s390 (from .../libjbig0_2.0-2_s390.deb) ...
Selecting previously unselected package libtiff5:s390.
-Unpacking libtiff5:s390 (from .../libtiff5_4.0.2-6_s390.deb) ...
+Unpacking libtiff5:s390 (from .../libtiff5_4.0.3-1_s390.deb) ...
+Selecting previously unselected package libunistring0:s390.
+Unpacking libunistring0:s390 (from .../libunistring0_0.9.3-5_s390.deb) ...
+Selecting previously unselected package libxft2:s390.
+Unpacking libxft2:s390 (from .../libxft2_2.3.1-1_s390.deb) ...
Selecting previously unselected package libxss1:s390.
Unpacking libxss1:s390 (from .../libxss1_1%3a1.2.2-1_s390.deb) ...
Selecting previously unselected package libxt6:s390.
-Unpacking libxt6:s390 (from .../libxt6_1%3a1.1.3-1_s390.deb) ...
-Selecting previously unselected package libmpc3:s390.
-Unpacking libmpc3:s390 (from .../libmpc3_1.0.1-1_s390.deb) ...
+Unpacking libxt6:s390 (from .../libxt6_1%3a1.1.3-1+deb7u1_s390.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_s390.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_s390.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_s390.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_s390.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Preparing to replace libstdc++6-4.6-dev 4.6.3-15 (using .../libstdc++6-4.6-dev_4.6.4-2_s390.deb) ...
-Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.3-15 (using .../g++-4.6_4.6.4-2_s390.deb) ...
-Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.3-15 (using .../gcc-4.6_4.6.4-2_s390.deb) ...
-Unpacking replacement gcc-4.6 ...
-Preparing to replace cpp-4.6 4.6.3-15 (using .../cpp-4.6_4.6.4-2_s390.deb) ...
-Unpacking replacement cpp-4.6 ...
-Preparing to replace gcc-4.6-base:s390 4.6.3-15 (using .../gcc-4.6-base_4.6.4-2_s390.deb) ...
-Unpacking replacement gcc-4.6-base:s390 ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_s390.deb) ...
-Selecting previously unselected package libasprintf-dev:s390.
-Unpacking libasprintf-dev:s390 (from .../libasprintf-dev_0.18.1.1-10_s390.deb) ...
-Selecting previously unselected package libgettextpo-dev:s390.
-Unpacking libgettextpo-dev:s390 (from .../libgettextpo-dev_0.18.1.1-10_s390.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_s390.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_s390.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_s390.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-4_s390.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_s390.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.4-2_s390.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_s390.deb) ...
Selecting previously unselected package libblas-dev.
@@ -489,9 +488,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_s390.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_s390.deb) ...
Selecting previously unselected package libtinfo-dev:s390.
-Unpacking libtinfo-dev:s390 (from .../libtinfo-dev_5.9+20130504-1_s390.deb) ...
+Unpacking libtinfo-dev:s390 (from .../libtinfo-dev_5.9+20130608-1_s390.deb) ...
Selecting previously unselected package libncurses5-dev:s390.
-Unpacking libncurses5-dev:s390 (from .../libncurses5-dev_5.9+20130504-1_s390.deb) ...
+Unpacking libncurses5-dev:s390 (from .../libncurses5-dev_5.9+20130608-1_s390.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_s390.deb) ...
Selecting previously unselected package libpcre3-dev:s390.
@@ -511,54 +510,67 @@ Unpacking unzip (from .../archives/unzip_6.0-9_s390.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_s390.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_s390.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_s390.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_s390.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1-1_s390.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_s390.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1-1_all.deb) ...
-Setting up libc-dev-bin (2.17-3) ...
-Setting up libc6-dev:s390 (2.17-3) ...
-Setting up libpipeline1:s390 (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Setting up libgomp1:s390 (4.8.1-8) ...
+Setting up libpipeline1:s390 (1.2.4-1) ...
+Setting up libudev0:s390 (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
-Setting up man-db (2.6.3-6) ...
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:s390 (0.18.1.1-10) ...
-Setting up libmagic1:s390 (1:5.14-1) ...
-Setting up libpcre3:s390 (1:8.31-2) ...
-Setting up libxml2:s390 (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:s390 (2.1.0-3) ...
+Setting up libasprintf0c2:s390 (0.18.3-1) ...
+Setting up libmagic1:s390 (1:5.14-2) ...
+Setting up libxml2:s390 (2.9.1+dfsg1-2) ...
+Setting up libdrm2:s390 (2.4.45-3) ...
+Setting up libglapi-mesa:s390 (9.1.4-1) ...
+Setting up libxau6:s390 (1:1.0.8-1) ...
+Setting up libxdmcp6:s390 (1:1.1.1-1) ...
+Setting up libxcb1:s390 (1.9.1-3) ...
+Setting up libxcb-dri2-0:s390 (1.9.1-3) ...
+Setting up libgbm1:s390 (9.1.4-1) ...
+Setting up libffi6:s390 (3.0.13-4) ...
+Setting up libwayland-client0:s390 (1.1.0-2) ...
+Setting up libwayland-server0:s390 (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:s390 (2:1.6.0-1) ...
+Setting up libx11-xcb1:s390 (2:1.6.0-1) ...
+Setting up libxcb-render0:s390 (1.9.1-3) ...
+Setting up libxcb-shape0:s390 (1.9.1-3) ...
+Setting up libxcb-xfixes0:s390 (1.9.1-3) ...
+Setting up libegl1-mesa:s390 (9.1.4-1) ...
+Setting up libexpat1:s390 (2.1.0-4) ...
Setting up libfreetype6:s390 (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:s390 (2.9.0-7.1) ...
-Setting up libpixman-1-0:s390 (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:s390 (2.10.2-2) ...
+Setting up libxcb-glx0:s390 (1.9.1-3) ...
+Setting up libxfixes3:s390 (1:5.0.1-1) ...
+Setting up libxdamage1:s390 (1:1.1.4-1) ...
+Setting up libxext6:s390 (2:1.3.2-1) ...
+Setting up libxxf86vm1:s390 (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:s390 (9.1.4-1) ...
+Setting up libpixman-1-0:s390 (0.30.0-3) ...
Setting up libpng12-0:s390 (1.2.49-4) ...
-Setting up libxau6:s390 (1:1.0.7-1) ...
-Setting up libxdmcp6:s390 (1:1.1.1-1) ...
-Setting up libxcb1:s390 (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:s390 (2:1.5.0-1) ...
-Setting up libxcb-render0:s390 (1.8.1-2) ...
-Setting up libxcb-shm0:s390 (1.8.1-2) ...
-Setting up libxext6:s390 (2:1.3.1-2) ...
-Setting up libxrender1:s390 (1:0.9.7-1) ...
-Setting up libcairo2:s390 (1.12.14-4) ...
-Setting up libffi6:s390 (3.0.13-4) ...
-Setting up libglib2.0-0:s390 (2.36.1-2build1) ...
+Setting up libxcb-shm0:s390 (1.9.1-3) ...
+Setting up libxrender1:s390 (1:0.9.8-1) ...
+Setting up libcairo2:s390 (1.12.14-5) ...
+Setting up libglib2.0-0:s390 (2.36.3-3) ...
No schema files found: doing nothing.
Setting up libcroco3:s390 (0.6.8-2) ...
Setting up libdatrie1:s390 (0.2.6-2) ...
-Setting up libunistring0:s390 (0.9.3-5) ...
-Setting up libgettextpo0:s390 (0.18.1.1-10) ...
-Setting up gcc-4.8-base:s390 (4.8.0-7) ...
-Setting up libgfortran3:s390 (4.8.0-7) ...
+Setting up libgfortran3:s390 (4.8.1-8) ...
+Setting up libgraphite2-3:s390 (1.2.3-1) ...
+Setting up libharfbuzz0a:s390 (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
@@ -566,35 +578,31 @@ Setting up libice6:s390 (2:1.0.8-2) ...
Setting up libjpeg8:s390 (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:s390 (0.1.19-2) ...
-Setting up libxft2:s390 (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:s390 (1.30.0-1) ...
+Setting up libpango-1.0-0:s390 (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:s390 (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:s390 (1.32.5-5+b1) ...
Setting up libpaper1:s390 (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:s390 (1:8.31-2) ...
Setting up libsm6:s390 (2:1.2.1-2) ...
Setting up libjbig0:s390 (2.0-2) ...
-Setting up libtiff5:s390 (4.0.2-6) ...
+Setting up libtiff5:s390 (4.0.3-1) ...
+Setting up libunistring0:s390 (0.9.3-5) ...
+Setting up libxft2:s390 (2.3.1-1) ...
Setting up libxss1:s390 (1:1.2.2-1) ...
-Setting up libxt6:s390 (1:1.1.3-1) ...
-Setting up libmpc3:s390 (1.0.1-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up gcc-4.6-base:s390 (4.6.4-2) ...
-Setting up cpp-4.6 (4.6.4-2) ...
-Setting up gcc-4.6 (4.6.4-2) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libasprintf-dev:s390 (0.18.1.1-10) ...
-Setting up libgettextpo-dev:s390 (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:s390 (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up gfortran-4.6 (4.6.4-4) ...
+Setting up gfortran (4:4.6.4-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -606,8 +614,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:s390 (5.9+20130504-1) ...
-Setting up libncurses5-dev:s390 (5.9+20130504-1) ...
+Setting up libtinfo-dev:s390 (5.9+20130608-1) ...
+Setting up libncurses5-dev:s390 (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:s390 (1:8.31-2) ...
Setting up zlib1g-dev:s390 (1:1.2.8.dfsg-1) ...
@@ -617,25 +625,24 @@ Setting up libreadline-dev:s390 (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1-1) ...
-Setting up g++-4.6 (4.6.4-2) ...
-Setting up libstdc++6-4.6-dev (4.6.4-2) ...
+Setting up r-base-dev (3.0.1-6) ...
+Processing triggers for libc-bin ...
Removing negative dependencies:
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 36 not upgraded.
+0 upgraded, 0 newly installed, 0 to remove and 23 not upgraded.
Checking correctness of dependencies...
Kernel: Linux 2.6.32-5-s390x s390 (s390x)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6-dev_2.17-3 libstdc++6_4.7.2-5 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.2.39-2
-Package versions: apt_0.9.7.8 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-0.1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.20-3 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 debconf_1.5.49 debconf-i18n_1.5.49 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1 e2fsprogs_1.42.5-1 fakeroot_1.18.4-2 file_1:5.14-1 findut [...]
+Toolchain package versions: binutils_2.23.52.20130620-1 dpkg-dev_1.16.10 g++-4.6_4.6.4-4 gcc-4.6_4.6.4-4 libc6-dev_2.17-7 libstdc++6_4.8.1-8 libstdc++6-4.6-dev_4.6.4-4 linux-libc-dev_3.9.8-1
+Package versions: apt_0.9.9 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130620-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.20-3 cpp_4:4.6.4-2 cpp-4.6_4.6.4-4 dash_0.5.7-3 debconf_1.5.50 debconf-i18n_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.8-1 e2fsprogs_1.42.8-1 fakeroot_1.19-2 file_1:5.14-2 [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -646,12 +653,12 @@ Unpack source
─────────────
gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
@@ -661,12 +668,11 @@ dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture s390
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -682,7 +688,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -701,26 +707,26 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/src'
+make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/src'
+make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/src'
+installing to /build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -730,13 +736,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -744,7 +750,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -782,7 +788,7 @@ dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/changelog.Debian
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V/r-bioc-limma-3.16.3~dfsg'
+ cd '/build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV/r-bioc-limma-3.16.7~dfsg'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -813,79 +819,59 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_s390.deb'.
- dpkg-genchanges -B -ms390/s390x Build Daemon (zappa) <buildd_s390x-zappa at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_s390.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_s390.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zappa) <buildd_s390x-zappa at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_s390.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1412
+Build finished at 20130804-0938
-r-bioc-limma_3.16.3~dfsg-1_s390.changes:
+r-bioc-limma_3.16.7~dfsg-1_s390.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: s390
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
Maintainer: s390/s390x Build Daemon (zappa) <buildd_s390x-zappa at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
- .
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- 9478c5291d2fbf647caba75b4896207f0445ed2f 1617016 r-bioc-limma_3.16.3~dfsg-1_s390.deb
+ 109ff4efab96f00ec4d124cdbbb96718e22e4b9b 869392 r-bioc-limma_3.16.7~dfsg-1_s390.deb
Checksums-Sha256:
- a4b61ca80f9df5ebd3ed52c8348265baabd58fb8db764b394aaa5e105880d39d 1617016 r-bioc-limma_3.16.3~dfsg-1_s390.deb
+ 1c2dbe0d887c10ecbc2aca9e95c687c752bb7fc0ce4ef3d62cdcc53afcd1cec3 869392 r-bioc-limma_3.16.7~dfsg-1_s390.deb
Files:
- aad3af6304b70f2be5b1b5d6626a5a3a 1617016 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_s390.deb
+ 9e36b2d63f98ca76ba1ee031c39e1c12 869392 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_s390.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_s390.deb
+r-bioc-limma_3.16.7~dfsg-1_s390.deb
───────────────────────────────────
new debian package, version 2.0.
- size 1617016 bytes: control archive= 1668 bytes.
+ size 869392 bytes: control archive= 1634 bytes.
774 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: s390
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1845
- Depends: libc6 (>= 2.1.3), r-base-core (>= 3.0.1-1)
+ Installed-Size: 1063
+ Depends: libc6 (>= 2.1.3), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -897,56 +883,55 @@ r-bioc-limma_3.16.3~dfsg-1_s390.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/share/doc/r-bioc-limma/tests/
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/lib/R/site-library/limma/
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 6703 2013-05-17 14:12 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 3411 2013-05-17 14:12 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 1405 2013-05-17 14:12 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 2567 2013-05-17 14:12 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 494761 2013-05-17 14:12 ./usr/lib/R/site-library/limma/help/limma.rdb
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 8492 2013-05-17 14:12 ./usr/lib/R/site-library/limma/libs/limma.so
--rw-r--r-- root/root 963 2013-05-17 14:12 ./usr/lib/R/site-library/limma/CITATION
--rw-r--r-- root/root 11214 2013-05-17 14:12 ./usr/lib/R/site-library/limma/NEWS.Rd
--rw-r--r-- root/root 986 2013-05-17 14:12 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 6375 2013-05-17 14:12 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 5944 2013-05-17 14:12 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 219 2013-05-17 14:12 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 1066 2013-05-17 14:12 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 3089 2013-05-17 14:12 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 541 2013-05-17 14:12 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 10085 2013-05-17 14:12 ./usr/lib/R/site-library/limma/INDEX
--rw-r--r-- root/root 2046 2013-05-17 14:12 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 1711 2013-05-17 14:12 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 673 2013-05-17 14:12 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 45597 2013-05-17 14:12 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 102936 2013-05-17 14:12 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 806089 2013-05-17 14:12 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 4115 2013-05-17 14:12 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 206550 2013-05-17 14:12 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 1056 2013-05-17 14:12 ./usr/lib/R/site-library/limma/R/limma
-drwxr-xr-x root/root 0 2013-05-17 14:12 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 37337 2013-05-17 14:12 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 1179 2013-05-17 14:12 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/lib/R/site-library/limma/
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 6742 2013-08-04 09:38 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 3422 2013-08-04 09:38 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 1406 2013-08-04 09:38 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 2577 2013-08-04 09:38 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 497370 2013-08-04 09:38 ./usr/lib/R/site-library/limma/help/limma.rdb
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 8252 2013-08-04 09:38 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 963 2013-08-04 09:38 ./usr/lib/R/site-library/limma/CITATION
+-rw-r--r-- root/root 11214 2013-08-04 09:38 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 986 2013-08-04 09:38 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 6386 2013-08-04 09:38 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5952 2013-08-04 09:38 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 219 2013-08-04 09:38 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 1070 2013-08-04 09:38 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 3098 2013-08-04 09:38 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 542 2013-08-04 09:38 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 10085 2013-08-04 09:38 ./usr/lib/R/site-library/limma/INDEX
+-rw-r--r-- root/root 2095 2013-08-04 09:38 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 1711 2013-08-04 09:38 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 673 2013-08-04 09:38 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 45597 2013-08-04 09:38 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 104280 2013-08-04 09:38 ./usr/lib/R/site-library/limma/doc/changelog.txt
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 4133 2013-08-04 09:38 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 207886 2013-08-04 09:38 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 1056 2013-08-04 09:38 ./usr/lib/R/site-library/limma/R/limma
+drwxr-xr-x root/root 0 2013-08-04 09:38 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 37564 2013-08-04 09:38 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2013-08-04 09:38 ./usr/lib/R/site-library/limma/html/R.css
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -960,7 +945,7 @@ Built successfully
│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390-sbuild-4cad662f-1bf6-4ff2-9c9d-3e4d7f07c617/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390-zosg9V
+Purging /var/lib/schroot/mount/sid-s390-sbuild-dfac6404-ee66-444e-810a-570423488ffa/build/buildd-r-bioc-limma_3.16.7~dfsg-1-s390-076gLV
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -968,84 +953,93 @@ Not cleaning session: cloned chroot in use
└──────────────────────────────────────────────────────────────────────────────┘
Architecture: s390
-Build-Space: 5856
-Build-Time: 34
+Build-Space: 3560
+Build-Time: 33
Distribution: sid
-Install-Time: 97
-Job: r-bioc-limma_3.16.3~dfsg-1
+Install-Time: 54
+Job: r-bioc-limma_3.16.7~dfsg-1
Package: r-bioc-limma
-Package-Time: 201
-Source-Version: 3.16.3~dfsg-1
-Space: 5856
+Package-Time: 164
+Source-Version: 3.16.7~dfsg-1
+Space: 3560
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1412
-Build needed 00:03:21, 5856k disc space
+Finished at 20130804-0938
+Build needed 00:02:44, 3560k disc space
Signature with key '09D4EA98' requested:
-From buildd at zandonai.debian.org Fri May 17 14:14:39 2013
-Return-path: <buildd at zandonai.debian.org>
-Received: from mailly.debian.org ([82.195.75.114])
+From buildd at zemlinsky.debian.org Sun Aug 04 09:36:52 2013
+Return-path: <buildd at zemlinsky.debian.org>
+Received: from mailly.debian.org ([2001:41b8:202:deb:6564:a62:52c3:4b72])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=mailly.debian.org, EMAIL=hostmaster at mailly.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
- (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1UdLQc-0007RT-Qe
- for logs at buildd.debian.org; Fri, 17 May 2013 14:14:38 +0000
-Received: from zandonai.debian.org ([80.245.147.46])
+ (Exim 4.72) (envelope-from <buildd at zemlinsky.debian.org>)
+ id 1V5uk7-0000kB-VF
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 09:36:52 +0000
+Received: from zemlinsky.debian.org ([2001:7c0:400:1337::818f:a006])
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- CN=zandonai.debian.org,
- EMAIL=hostmaster at zandonai.debian.org (verified)
- by mailly.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:256)
- (Exim 4.80) (envelope-from <buildd at zandonai.debian.org>)
- id 1UdLQc-0002mk-1D; Fri, 17 May 2013 14:14:38 +0000
-Received: from buildd by zandonai.debian.org with local (Exim 4.72)
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- id 1UdLQb-0007zd-LF; Fri, 17 May 2013 14:14:37 +0000
-Message-Id: <E1UdLQb-0007zd-LF at zandonai.debian.org>
-MIME-Version: 1.0
+ CN=zemlinsky.debian.org,
+ EMAIL=hostmaster at zemlinsky.debian.org (verified)
+ by mailly.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
+ (Exim 4.80) (envelope-from <buildd at zemlinsky.debian.org>)
+ id 1V5uk7-0006An-1Y; Sun, 04 Aug 2013 09:36:51 +0000
+Received: from buildd by zemlinsky.debian.org with local (Exim 4.80)
+ (envelope-from <buildd at zemlinsky.debian.org>)
+ id 1V5uk5-0007nc-El; Sun, 04 Aug 2013 09:36:49 +0000
Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Fri, 17 May 2013 14:14:37 +0000
-From: buildd on zandonai <buildd at zandonai.debian.org>
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 09:36:49 +0000
+From: buildd on zemlinsky <buildd at zemlinsky.debian.org>
To: phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on s390x
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on s390x
(dist=sid)
-Key-Id: 06DAB0BE
+Key-Id: 52DC96B8
+Message-Id: <E1V5uk5-0007nc-El at zemlinsky.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on zemlinsky.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (s390x) 17 May 2013 14:13 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (s390x) 04 Aug 2013 09:35 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: s390x
-Get:1 http://ftp.de.debian.org unstable Release.gpg [1571 B]
-Get:2 http://ftp.de.debian.org unstable Release [203 kB]
-Get:3 http://incoming.debian.org unstable Release.gpg [1571 B]
-Get:4 http://ftp.de.debian.org unstable/main Sources [6729 kB]
-Get:5 http://incoming.debian.org buildd-unstable Release.gpg [1571 B]
-Get:6 http://incoming.debian.org unstable Release [203 kB]
-Get:7 http://incoming.debian.org buildd-unstable Release [109 kB]
-Get:8 http://incoming.debian.org unstable/main Sources [6729 kB]
-Get:9 http://ftp.de.debian.org unstable/contrib Sources [53.7 kB]
-Get:10 http://ftp.de.debian.org unstable/non-free Sources [103 kB]
-Get:11 http://ftp.de.debian.org unstable/main s390x Packages [6147 kB]
-Get:12 http://ftp.de.debian.org unstable/contrib s390x Packages [36.6 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:15 http://incoming.debian.org unstable/main s390x Packages [6147 kB]
-Get:16 http://incoming.debian.org unstable/contrib s390x Packages [36.6 kB]
-Get:17 http://incoming.debian.org buildd-unstable/main Sources [104 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib Sources [873 B]
-Get:19 http://incoming.debian.org buildd-unstable/non-free Sources [2683 B]
-Get:20 http://incoming.debian.org buildd-unstable/main s390x Packages [40.4 kB]
-Get:21 http://incoming.debian.org buildd-unstable/contrib s390x Packages [14 B]
-Fetched 26.8 MB in 24s (1087 kB/s)
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: s390
+Host Architecture: s390x
+Build Architecture: s390x
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-noui1p/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-noui1p' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-s390x-sbuild-003ba854-519c-476f-8b9a-5d8e47453ccb' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://ftp-stud.hs-esslingen.de unstable InRelease [204 kB]
+Hit http://ftp-stud.hs-esslingen.de unstable/main Sources
+Hit http://ftp-stud.hs-esslingen.de unstable/contrib Sources
+Hit http://ftp-stud.hs-esslingen.de unstable/non-free Sources
+Hit http://ftp-stud.hs-esslingen.de unstable/main s390x Packages
+Hit http://ftp-stud.hs-esslingen.de unstable/contrib s390x Packages
+Get:2 http://incoming.debian.org unstable InRelease [204 kB]
+Get:3 http://incoming.debian.org buildd-unstable InRelease [111 kB]
+Get:4 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:5 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:6 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:7 http://incoming.debian.org unstable/main s390x Packages [6183 kB]
+Get:8 http://incoming.debian.org unstable/contrib s390x Packages [37.1 kB]
+Get:9 http://incoming.debian.org buildd-unstable/main Sources [100 kB]
+Get:10 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:11 http://incoming.debian.org buildd-unstable/non-free Sources [2795 B]
+Get:12 http://incoming.debian.org buildd-unstable/main s390x Packages [74.5 kB]
+Get:13 http://incoming.debian.org buildd-unstable/contrib s390x Packages [14 B]
+Fetched 14.0 MB in 9s (1451 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -1065,337 +1059,344 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 0s (2670 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (247 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-FcTYRK/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: already installed (1.18.4-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
-Removing negative dependencies:
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 50 not upgraded.
+Need to get 0 B/710 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 10979 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-Covdkr/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.1)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-1)
-bsdutils: already installed (1:2.20.1-5.3)
-coreutils: already installed (8.20-3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.13-38)
-login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.3)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-21)
-sed: already installed (4.2.1-10)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-5)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (2.13-38)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130516
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils cpp-4.6 file fontconfig fontconfig-config fonts-dejavu-core
- g++-4.6 gcc-4.6 gcc-4.6-base gcc-4.8-base gettext gettext-base gfortran
- gfortran-4.6 groff-base html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6 libc6-dev
- libcairo2 libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1 libfreetype6
- libgettextpo-dev libgettextpo0 libgfortran3 libglib2.0-0 libice6 libjbig0
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5
- libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
+ bsdmainutils cdbs cpp cpp-4.6 debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core g++-4.6 gcc gcc-4.6 gcc-4.6-base gcc-4.8-base gettext
+ gettext-base gfortran gfortran-4.6 groff-base intltool-debian libasprintf0c2
+ libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libdrm2
+ libegl1-mesa libexpat1 libffi6 libfontconfig1 libfreetype6 libgbm1 libgcc1
+ libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgomp1
+ libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev
libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libstdc++6-4.6-dev libthai-data
- libthai0 libtiff5 libtinfo-dev libtinfo5 libunistring0 libx11-6 libx11-data
- libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
- libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf r-base-core
- tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g
+ libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev
+ libthai-data libthai0 libtiff5 libtinfo-dev libudev0 libunistring0
+ libwayland-client0 libwayland-server0 libx11-6 libx11-data libx11-xcb1
+ libxau6 libxcb-dri2-0 libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0
+ libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2
+ libxml2 libxrender1 libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core
+ r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make
- g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-4.6-multilib
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib manpages-dev
+ autoconf automake1.9 libtool flex bison gdb gcc-doc gcc-4.6-multilib
libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg libquadmath-dbg libmudflap0-dbg
- libcloog-ppl0 libppl-c2 libppl7 gettext-doc gfortran-multilib gfortran-doc
- gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff glibc-doc
- ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp
- ttf-arphic-gkai00mp ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser
- libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
- texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
- texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
- texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin
+ libcloog-ppl1 libcloog-ppl0 libppl-c4 libppl12 libppl9 gettext-doc
+ gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc
+ libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
+ ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp
+ libstdc++6-4.6-doc less www-browser libmail-box-perl r-doc-info r-doc-pdf
+ r-mathlib r-base-html texlive-base texlive-latex-base
+ texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
+ texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
+ texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint manpages-dev libglib2.0-data
- shared-mime-info libgpm2 xml-core libmail-sendmail-perl r-recommended
- r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
- fonts-dejavu-core gcc-4.8-base gettext gettext-base gfortran gfortran-4.6
- groff-base html2text intltool-debian libasprintf-dev libasprintf0c2
- libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi6 libfontconfig1 libfreetype6 libgettextpo-dev libgettextpo0
- libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
- zlib1g-dev
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.6 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0
+ libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
+ libtinfo-dev libudev0 libunistring0 libwayland-client0 libwayland-server0
+ libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0
+ libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1
+ libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6
+ libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-dev-bin libc6 libc6-dev
- libncurses5 libstdc++6-4.6-dev libtinfo5 ncurses-bin zlib1g
-12 upgraded, 84 newly installed, 0 to remove and 26 not upgraded.
-Need to get 82.5 MB of archives.
-After this operation, 130 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main libtinfo5 s390x 5.9+20130504-1 [301 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main libncurses5 s390x 5.9+20130504-1 [121 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main ncurses-bin s390x 5.9+20130504-1 [366 kB]
-Get:4 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libc6-dev s390x 2.17-3 [2955 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main zlib1g s390x 1:1.2.8.dfsg-1 [94.1 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.3-1 [41.6 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.22.2-2 [738 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.5 [216 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.3-6 [888 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main libasprintf0c2 s390x 0.18.1.1-10 [27.2 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 1:5.14-1 [214 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 1:8.31-2 [259 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.8.0+dfsg1-7+nmu1 [902 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main libexpat1 s390x 2.1.0-3 [145 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 s390x 2.4.9-1.1 [465 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:20 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 s390x 2.9.0-7.1 [302 kB]
-Get:21 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 s390x 0.26.0-4 [368 kB]
-Get:22 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 s390x 1.2.49-4 [193 kB]
-Get:23 http://ftp.de.debian.org/debian/ unstable/main libxau6 s390x 1:1.0.7-1 [18.6 kB]
-Get:24 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 s390x 1:1.1.1-1 [26.5 kB]
-Get:25 http://ftp.de.debian.org/debian/ unstable/main libxcb1 s390x 1.8.1-2 [53.1 kB]
-Get:26 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:27 http://ftp.de.debian.org/debian/ unstable/main libx11-6 s390x 2:1.5.0-1 [917 kB]
-Get:28 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 s390x 1.8.1-2 [19.2 kB]
-Get:29 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 s390x 1.8.1-2 [10.4 kB]
-Get:30 http://ftp.de.debian.org/debian/ unstable/main libxext6 s390x 2:1.3.1-2 [56.8 kB]
-Get:31 http://ftp.de.debian.org/debian/ unstable/main libxrender1 s390x 1:0.9.7-1 [33.6 kB]
-Get:32 http://ftp.de.debian.org/debian/ unstable/main libcairo2 s390x 1.12.14-4 [1008 kB]
-Get:33 http://ftp.de.debian.org/debian/ unstable/main libffi6 s390x 3.0.13-4 [21.6 kB]
-Get:34 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.36.1-2build1 [2010 kB]
-Get:35 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 s390x 0.2.6-2 [30.6 kB]
-Get:36 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
-Get:37 http://ftp.de.debian.org/debian/ unstable/main libgettextpo0 s390x 0.18.1.1-10 [158 kB]
-Get:38 http://ftp.de.debian.org/debian/ unstable/main gcc-4.8-base s390x 4.8.0-7 [148 kB]
-Get:39 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 s390x 4.8.0-7 [359 kB]
-Get:40 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:41 http://ftp.de.debian.org/debian/ unstable/main libice6 s390x 2:1.0.8-2 [65.6 kB]
-Get:42 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 s390x 8d-1 [190 kB]
-Get:43 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:44 http://ftp.de.debian.org/debian/ unstable/main libthai0 s390x 0.1.19-2 [44.0 kB]
-Get:45 http://ftp.de.debian.org/debian/ unstable/main libxft2 s390x 2.3.1-1 [63.6 kB]
-Get:46 http://ftp.de.debian.org/debian/ unstable/main fontconfig s390x 2.9.0-7.1 [351 kB]
-Get:47 http://ftp.de.debian.org/debian/ unstable/main libpango1.0-0 s390x 1.30.0-1 [473 kB]
-Get:48 http://ftp.de.debian.org/debian/ unstable/main libpaper1 s390x 1.1.24+nmu2 [22.0 kB]
-Get:49 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 s390x 1:8.31-2 [128 kB]
-Get:50 http://ftp.de.debian.org/debian/ unstable/main libsm6 s390x 2:1.2.1-2 [34.9 kB]
-Get:51 http://ftp.de.debian.org/debian/ unstable/main libjbig0 s390x 2.0-2 [35.7 kB]
-Get:52 http://ftp.de.debian.org/debian/ unstable/main libtiff5 s390x 4.0.2-6 [245 kB]
-Get:53 http://ftp.de.debian.org/debian/ unstable/main libxss1 s390x 1:1.2.2-1 [17.5 kB]
-Get:54 http://ftp.de.debian.org/debian/ unstable/main libxt6 s390x 1:1.1.3-1 [216 kB]
-Get:55 http://ftp.de.debian.org/debian/ unstable/main libmpc3 s390x 1.0.1-1 [45.1 kB]
-Get:56 http://ftp.de.debian.org/debian/ unstable/main file s390x 1:5.14-1 [54.4 kB]
-Get:57 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-10 [156 kB]
-Get:58 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:59 http://ftp.de.debian.org/debian/ unstable/main libstdc++6-4.6-dev s390x 4.6.4-2 [1704 kB]
-Get:60 http://ftp.de.debian.org/debian/ unstable/main g++-4.6 s390x 4.6.4-2 [5467 kB]
-Get:61 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libc-dev-bin s390x 2.17-3 [234 kB]
-Get:62 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libc6 s390x 2.17-3 [4602 kB]
-Get:63 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6 s390x 4.6.4-2 [4278 kB]
-Get:64 http://ftp.de.debian.org/debian/ unstable/main cpp-4.6 s390x 4.6.4-2 [3957 kB]
-Get:65 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6-base s390x 4.6.4-2 [142 kB]
-Get:66 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
-Get:67 http://ftp.de.debian.org/debian/ unstable/main libasprintf-dev s390x 0.18.1.1-10 [26.8 kB]
-Get:68 http://ftp.de.debian.org/debian/ unstable/main libgettextpo-dev s390x 0.18.1.1-10 [195 kB]
-Get:69 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-10 [1864 kB]
-Get:70 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:71 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:72 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20130516 [708 kB]
-Get:73 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.6 s390x 4.6.4-2 [4699 kB]
-Get:74 http://ftp.de.debian.org/debian/ unstable/main gfortran s390x 4:4.6.3-8 [1132 B]
-Get:75 http://ftp.de.debian.org/debian/ unstable/main libblas3 s390x 1.2.20110419-5 [218 kB]
-Get:76 http://ftp.de.debian.org/debian/ unstable/main libblas-dev s390x 1.2.20110419-5 [227 kB]
-Get:77 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev s390x 1.0.6-4 [39.1 kB]
-Get:78 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev s390x 8d-1 [297 kB]
-Get:79 http://ftp.de.debian.org/debian/ unstable/main liblapack3 s390x 3.4.2+dfsg-1 [4152 kB]
-Get:80 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libcroco3 s390x 0.6.8-2 [130 kB]
-Get:81 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev s390x 3.4.2+dfsg-1 [4555 kB]
-Get:82 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev s390x 5.9+20130504-1 [125 kB]
-Get:83 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev s390x 5.9+20130504-1 [233 kB]
-Get:84 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils s390x 1.1.24+nmu2 [18.5 kB]
-Get:85 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev s390x 1:8.31-2 [365 kB]
-Get:86 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.8.dfsg-1 [221 kB]
-Get:87 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev s390x 1.2.49-4 [273 kB]
-Get:88 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev s390x 6.2+dfsg-0.1 [200 kB]
-Get:89 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev s390x 6.2+dfsg-0.1 [898 B]
-Get:90 http://ftp.de.debian.org/debian/ unstable/main zip s390x 3.0-7 [354 kB]
-Get:91 http://ftp.de.debian.org/debian/ unstable/main unzip s390x 6.0-9 [204 kB]
-Get:92 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:93 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 s390x 8.5.11-2 [1657 kB]
-Get:94 http://ftp.de.debian.org/debian/ unstable/main tk8.5 s390x 8.5.11-2 [1229 kB]
-Get:95 http://ftp.de.debian.org/debian/ unstable/main r-base-core s390x 3.0.1-1 [21.6 MB]
-Get:96 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 3.0.1-1 [3896 B]
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base gcc-4.8-base libgcc1 libgomp1
+ libstdc++6 libstdc++6-4.6-dev
+11 upgraded, 98 newly installed, 0 to remove and 39 not upgraded.
+Need to get 76.1 MB/76.1 MB of archives.
+After this operation, 133 MB of additional disk space will be used.
+Get:1 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgomp1 s390x 4.8.1-8 [29.5 kB]
+Get:2 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gcc-4.8-base s390x 4.8.1-8 [151 kB]
+Get:3 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libstdc++6 s390x 4.8.1-8 [395 kB]
+Get:4 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgcc1 s390x 1:4.8.1-8 [32.3 kB]
+Get:5 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpipeline1 s390x 1.2.4-1 [42.6 kB]
+Get:6 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libudev0 s390x 175-7.2 [126 kB]
+Get:7 http://ftp-stud.hs-esslingen.de/debian/ unstable/main groff-base s390x 1.22.2-3 [737 kB]
+Get:8 http://ftp-stud.hs-esslingen.de/debian/ unstable/main bsdmainutils s390x 9.0.5 [216 kB]
+Get:9 http://ftp-stud.hs-esslingen.de/debian/ unstable/main man-db s390x 2.6.5-2 [969 kB]
+Get:10 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libasprintf0c2 s390x 0.18.3-1 [30.0 kB]
+Get:11 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libmagic1 s390x 1:5.14-2 [215 kB]
+Get:12 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxml2 s390x 2.9.1+dfsg1-2 [918 kB]
+Get:13 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libdrm2 s390x 2.4.45-3 [469 kB]
+Get:14 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libglapi-mesa s390x 9.1.4-1 [66.6 kB]
+Get:15 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxau6 s390x 1:1.0.8-1 [21.0 kB]
+Get:16 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxdmcp6 s390x 1:1.1.1-1 [26.5 kB]
+Get:17 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb1 s390x 1.9.1-3 [53.5 kB]
+Get:18 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-dri2-0 s390x 1.9.1-3 [13.2 kB]
+Get:19 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgbm1 s390x 9.1.4-1 [351 kB]
+Get:20 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libffi6 s390x 3.0.13-4 [21.6 kB]
+Get:21 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libwayland-client0 s390x 1.1.0-2 [23.9 kB]
+Get:22 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libwayland-server0 s390x 1.1.0-2 [33.9 kB]
+Get:23 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:24 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libx11-6 s390x 2:1.6.0-1 [934 kB]
+Get:25 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libx11-xcb1 s390x 2:1.6.0-1 [153 kB]
+Get:26 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-render0 s390x 1.9.1-3 [19.7 kB]
+Get:27 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-shape0 s390x 1.9.1-3 [11.6 kB]
+Get:28 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-xfixes0 s390x 1.9.1-3 [15.3 kB]
+Get:29 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libegl1-mesa s390x 9.1.4-1 [81.0 kB]
+Get:30 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libexpat1 s390x 2.1.0-4 [145 kB]
+Get:31 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libfreetype6 s390x 2.4.9-1.1 [465 kB]
+Get:32 http://ftp-stud.hs-esslingen.de/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:33 http://ftp-stud.hs-esslingen.de/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:34 http://ftp-stud.hs-esslingen.de/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:35 http://ftp-stud.hs-esslingen.de/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:36 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libfontconfig1 s390x 2.10.2-2 [323 kB]
+Get:37 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-glx0 s390x 1.9.1-3 [34.8 kB]
+Get:38 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxfixes3 s390x 1:5.0.1-1 [23.1 kB]
+Get:39 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxdamage1 s390x 1:1.1.4-1 [15.3 kB]
+Get:40 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxext6 s390x 2:1.3.2-1 [57.4 kB]
+Get:41 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxxf86vm1 s390x 1:1.1.2-1+deb7u1 [19.8 kB]
+Get:42 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgl1-mesa-glx s390x 9.1.4-1 [145 kB]
+Get:43 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpixman-1-0 s390x 0.30.0-3 [432 kB]
+Get:44 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpng12-0 s390x 1.2.49-4 [193 kB]
+Get:45 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-shm0 s390x 1.9.1-3 [10.8 kB]
+Get:46 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxrender1 s390x 1:0.9.8-1 [34.3 kB]
+Get:47 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libcairo2 s390x 1.12.14-5 [1046 kB]
+Get:48 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libglib2.0-0 s390x 2.36.3-3 [2017 kB]
+Get:49 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libcroco3 s390x 0.6.8-2 [130 kB]
+Get:50 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libdatrie1 s390x 0.2.6-2 [30.6 kB]
+Get:51 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgfortran3 s390x 4.8.1-8 [355 kB]
+Get:52 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgraphite2-3 s390x 1.2.3-1 [66.5 kB]
+Get:53 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libharfbuzz0a s390x 0.9.19-1 [457 kB]
+Get:54 http://ftp-stud.hs-esslingen.de/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:55 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libice6 s390x 2:1.0.8-2 [65.6 kB]
+Get:56 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libjpeg8 s390x 8d-1 [190 kB]
+Get:57 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:58 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libthai0 s390x 0.1.19-2 [44.0 kB]
+Get:59 http://ftp-stud.hs-esslingen.de/debian/ unstable/main fontconfig s390x 2.10.2-2 [377 kB]
+Get:60 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpango-1.0-0 s390x 1.32.5-5+b1 [262 kB]
+Get:61 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpangoft2-1.0-0 s390x 1.32.5-5+b1 [186 kB]
+Get:62 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpangocairo-1.0-0 s390x 1.32.5-5+b1 [173 kB]
+Get:63 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpaper1 s390x 1.1.24+nmu2 [22.0 kB]
+Get:64 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpcrecpp0 s390x 1:8.31-2 [128 kB]
+Get:65 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libsm6 s390x 2:1.2.1-2 [34.9 kB]
+Get:66 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libjbig0 s390x 2.0-2 [35.7 kB]
+Get:67 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libtiff5 s390x 4.0.3-1 [247 kB]
+Get:68 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
+Get:69 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxft2 s390x 2.3.1-1 [63.6 kB]
+Get:70 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxss1 s390x 1:1.2.2-1 [17.5 kB]
+Get:71 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxt6 s390x 1:1.1.3-1+deb7u1 [216 kB]
+Get:72 http://ftp-stud.hs-esslingen.de/debian/ unstable/main file s390x 1:5.14-2 [54.4 kB]
+Get:73 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gettext-base s390x 0.18.3-1 [163 kB]
+Get:74 http://ftp-stud.hs-esslingen.de/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:75 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libstdc++6-4.6-dev s390x 4.6.4-4 [1720 kB]
+Get:76 http://ftp-stud.hs-esslingen.de/debian/ unstable/main g++-4.6 s390x 4.6.4-4 [5439 kB]
+Get:77 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gcc-4.6 s390x 4.6.4-4 [4255 kB]
+Get:78 http://ftp-stud.hs-esslingen.de/debian/ unstable/main cpp-4.6 s390x 4.6.4-4 [3934 kB]
+Get:79 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gcc-4.6-base s390x 4.6.4-4 [143 kB]
+Get:80 http://ftp-stud.hs-esslingen.de/debian/ unstable/main cpp s390x 4:4.6.4-2 [16.9 kB]
+Get:81 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gettext s390x 0.18.3-1 [1939 kB]
+Get:82 http://ftp-stud.hs-esslingen.de/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:83 http://ftp-stud.hs-esslingen.de/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:84 http://ftp-stud.hs-esslingen.de/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:85 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gcc s390x 4:4.6.4-2 [5002 B]
+Get:86 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gfortran-4.6 s390x 4.6.4-4 [4671 kB]
+Get:87 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gfortran s390x 4:4.6.4-2 [1124 B]
+Get:88 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libblas3 s390x 1.2.20110419-5 [218 kB]
+Get:89 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libblas-dev s390x 1.2.20110419-5 [227 kB]
+Get:90 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libbz2-dev s390x 1.0.6-4 [39.1 kB]
+Get:91 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libjpeg8-dev s390x 8d-1 [297 kB]
+Get:92 http://ftp-stud.hs-esslingen.de/debian/ unstable/main liblapack3 s390x 3.4.2+dfsg-1 [4152 kB]
+Get:93 http://ftp-stud.hs-esslingen.de/debian/ unstable/main liblapack-dev s390x 3.4.2+dfsg-1 [4555 kB]
+Get:94 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libtinfo-dev s390x 5.9+20130608-1 [125 kB]
+Get:95 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libncurses5-dev s390x 5.9+20130608-1 [233 kB]
+Get:96 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpaper-utils s390x 1.1.24+nmu2 [18.5 kB]
+Get:97 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpcre3-dev s390x 1:8.31-2 [365 kB]
+Get:98 http://ftp-stud.hs-esslingen.de/debian/ unstable/main zlib1g-dev s390x 1:1.2.8.dfsg-1 [221 kB]
+Get:99 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpng12-dev s390x 1.2.49-4 [273 kB]
+Get:100 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libreadline6-dev s390x 6.2+dfsg-0.1 [200 kB]
+Get:101 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libreadline-dev s390x 6.2+dfsg-0.1 [898 B]
+Get:102 http://ftp-stud.hs-esslingen.de/debian/ unstable/main zip s390x 3.0-7 [354 kB]
+Get:103 http://ftp-stud.hs-esslingen.de/debian/ unstable/main unzip s390x 6.0-9 [204 kB]
+Get:104 http://ftp-stud.hs-esslingen.de/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:105 http://ftp-stud.hs-esslingen.de/debian/ unstable/main tcl8.5 s390x 8.5.14-2 [1667 kB]
+Get:106 http://ftp-stud.hs-esslingen.de/debian/ unstable/main tk8.5 s390x 8.5.14-2 [1237 kB]
+Get:107 http://ftp-stud.hs-esslingen.de/debian/ unstable/main r-base-core s390x 3.0.1-6 [21.6 MB]
+Get:108 http://ftp-stud.hs-esslingen.de/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 82.5 MB in 23s (3479 kB/s)
-(Reading database ... 10877 files and directories currently installed.)
-Preparing to replace libc6-dev:s390x 2.13-38 (using .../libc6-dev_2.17-3_s390x.deb) ...
-Unpacking replacement libc6-dev:s390x ...
-Preparing to replace libc-dev-bin 2.13-38 (using .../libc-dev-bin_2.17-3_s390x.deb) ...
-Unpacking replacement libc-dev-bin ...
-Preparing to replace libc6:s390x 2.13-38 (using .../libc6_2.17-3_s390x.deb) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Unpacking replacement libc6:s390x ...
-Setting up libc6:s390x (2.17-3) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Nothing to restart.
-(Reading database ... 10899 files and directories currently installed.)
-Preparing to replace libtinfo5:s390x 5.9-10 (using .../libtinfo5_5.9+20130504-1_s390x.deb) ...
-Unpacking replacement libtinfo5:s390x ...
-Setting up libtinfo5:s390x (5.9+20130504-1) ...
-(Reading database ... 10899 files and directories currently installed.)
-Preparing to replace libncurses5:s390x 5.9-10 (using .../libncurses5_5.9+20130504-1_s390x.deb) ...
-Unpacking replacement libncurses5:s390x ...
-Setting up libncurses5:s390x (5.9+20130504-1) ...
-(Reading database ... 10899 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_s390x.deb) ...
-Unpacking replacement ncurses-bin ...
-Setting up ncurses-bin (5.9+20130504-1) ...
-(Reading database ... 10897 files and directories currently installed.)
-Preparing to replace zlib1g:s390x 1:1.2.7.dfsg-13 (using .../zlib1g_1%3a1.2.8.dfsg-1_s390x.deb) ...
-Unpacking replacement zlib1g:s390x ...
-Setting up zlib1g:s390x (1:1.2.8.dfsg-1) ...
+Fetched 76.1 MB in 5s (13.6 MB/s)
+(Reading database ... 10979 files and directories currently installed.)
+Preparing to replace libgomp1:s390x 4.8.1-3 (using .../libgomp1_4.8.1-8_s390x.deb) ...
+Unpacking replacement libgomp1:s390x ...
+Preparing to replace gcc-4.8-base:s390x 4.8.1-3 (using .../gcc-4.8-base_4.8.1-8_s390x.deb) ...
+Unpacking replacement gcc-4.8-base:s390x ...
+Setting up gcc-4.8-base:s390x (4.8.1-8) ...
+(Reading database ... 10979 files and directories currently installed.)
+Preparing to replace libstdc++6:s390x 4.8.1-3 (using .../libstdc++6_4.8.1-8_s390x.deb) ...
+Unpacking replacement libstdc++6:s390x ...
+Setting up libstdc++6:s390x (4.8.1-8) ...
+Processing triggers for libc-bin ...
+(Reading database ... 10979 files and directories currently installed.)
+Preparing to replace libgcc1:s390x 1:4.8.1-3 (using .../libgcc1_1%3a4.8.1-8_s390x.deb) ...
+Unpacking replacement libgcc1:s390x ...
+Setting up libgcc1:s390x (1:4.8.1-8) ...
+Processing triggers for libc-bin ...
Selecting previously unselected package libpipeline1:s390x.
-(Reading database ... 10897 files and directories currently installed.)
-Unpacking libpipeline1:s390x (from .../libpipeline1_1.2.3-1_s390x.deb) ...
+(Reading database ... 10979 files and directories currently installed.)
+Unpacking libpipeline1:s390x (from .../libpipeline1_1.2.4-1_s390x.deb) ...
+Selecting previously unselected package libudev0:s390x.
+Unpacking libudev0:s390x (from .../libudev0_175-7.2_s390x.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_s390x.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_s390x.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_s390x.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_s390x.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_s390x.deb) ...
Selecting previously unselected package libasprintf0c2:s390x.
-Unpacking libasprintf0c2:s390x (from .../libasprintf0c2_0.18.1.1-10_s390x.deb) ...
+Unpacking libasprintf0c2:s390x (from .../libasprintf0c2_0.18.3-1_s390x.deb) ...
Selecting previously unselected package libmagic1:s390x.
-Unpacking libmagic1:s390x (from .../libmagic1_1%3a5.14-1_s390x.deb) ...
-Selecting previously unselected package libpcre3:s390x.
-Unpacking libpcre3:s390x (from .../libpcre3_1%3a8.31-2_s390x.deb) ...
+Unpacking libmagic1:s390x (from .../libmagic1_1%3a5.14-2_s390x.deb) ...
Selecting previously unselected package libxml2:s390x.
-Unpacking libxml2:s390x (from .../libxml2_2.8.0+dfsg1-7+nmu1_s390x.deb) ...
+Unpacking libxml2:s390x (from .../libxml2_2.9.1+dfsg1-2_s390x.deb) ...
+Selecting previously unselected package libdrm2:s390x.
+Unpacking libdrm2:s390x (from .../libdrm2_2.4.45-3_s390x.deb) ...
+Selecting previously unselected package libglapi-mesa:s390x.
+Unpacking libglapi-mesa:s390x (from .../libglapi-mesa_9.1.4-1_s390x.deb) ...
+Selecting previously unselected package libxau6:s390x.
+Unpacking libxau6:s390x (from .../libxau6_1%3a1.0.8-1_s390x.deb) ...
+Selecting previously unselected package libxdmcp6:s390x.
+Unpacking libxdmcp6:s390x (from .../libxdmcp6_1%3a1.1.1-1_s390x.deb) ...
+Selecting previously unselected package libxcb1:s390x.
+Unpacking libxcb1:s390x (from .../libxcb1_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libxcb-dri2-0:s390x.
+Unpacking libxcb-dri2-0:s390x (from .../libxcb-dri2-0_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libgbm1:s390x.
+Unpacking libgbm1:s390x (from .../libgbm1_9.1.4-1_s390x.deb) ...
+Selecting previously unselected package libffi6:s390x.
+Unpacking libffi6:s390x (from .../libffi6_3.0.13-4_s390x.deb) ...
+Selecting previously unselected package libwayland-client0:s390x.
+Unpacking libwayland-client0:s390x (from .../libwayland-client0_1.1.0-2_s390x.deb) ...
+Selecting previously unselected package libwayland-server0:s390x.
+Unpacking libwayland-server0:s390x (from .../libwayland-server0_1.1.0-2_s390x.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:s390x.
+Unpacking libx11-6:s390x (from .../libx11-6_2%3a1.6.0-1_s390x.deb) ...
+Selecting previously unselected package libx11-xcb1:s390x.
+Unpacking libx11-xcb1:s390x (from .../libx11-xcb1_2%3a1.6.0-1_s390x.deb) ...
+Selecting previously unselected package libxcb-render0:s390x.
+Unpacking libxcb-render0:s390x (from .../libxcb-render0_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libxcb-shape0:s390x.
+Unpacking libxcb-shape0:s390x (from .../libxcb-shape0_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libxcb-xfixes0:s390x.
+Unpacking libxcb-xfixes0:s390x (from .../libxcb-xfixes0_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libegl1-mesa:s390x.
+Unpacking libegl1-mesa:s390x (from .../libegl1-mesa_9.1.4-1_s390x.deb) ...
Selecting previously unselected package libexpat1:s390x.
-Unpacking libexpat1:s390x (from .../libexpat1_2.1.0-3_s390x.deb) ...
+Unpacking libexpat1:s390x (from .../libexpat1_2.1.0-4_s390x.deb) ...
Selecting previously unselected package libfreetype6:s390x.
Unpacking libfreetype6:s390x (from .../libfreetype6_2.4.9-1.1_s390x.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:s390x.
-Unpacking libfontconfig1:s390x (from .../libfontconfig1_2.9.0-7.1_s390x.deb) ...
+Unpacking libfontconfig1:s390x (from .../libfontconfig1_2.10.2-2_s390x.deb) ...
+Selecting previously unselected package libxcb-glx0:s390x.
+Unpacking libxcb-glx0:s390x (from .../libxcb-glx0_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libxfixes3:s390x.
+Unpacking libxfixes3:s390x (from .../libxfixes3_1%3a5.0.1-1_s390x.deb) ...
+Selecting previously unselected package libxdamage1:s390x.
+Unpacking libxdamage1:s390x (from .../libxdamage1_1%3a1.1.4-1_s390x.deb) ...
+Selecting previously unselected package libxext6:s390x.
+Unpacking libxext6:s390x (from .../libxext6_2%3a1.3.2-1_s390x.deb) ...
+Selecting previously unselected package libxxf86vm1:s390x.
+Unpacking libxxf86vm1:s390x (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_s390x.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:s390x.
+Unpacking libgl1-mesa-glx:s390x (from .../libgl1-mesa-glx_9.1.4-1_s390x.deb) ...
Selecting previously unselected package libpixman-1-0:s390x.
-Unpacking libpixman-1-0:s390x (from .../libpixman-1-0_0.26.0-4_s390x.deb) ...
+Unpacking libpixman-1-0:s390x (from .../libpixman-1-0_0.30.0-3_s390x.deb) ...
Selecting previously unselected package libpng12-0:s390x.
Unpacking libpng12-0:s390x (from .../libpng12-0_1.2.49-4_s390x.deb) ...
-Selecting previously unselected package libxau6:s390x.
-Unpacking libxau6:s390x (from .../libxau6_1%3a1.0.7-1_s390x.deb) ...
-Selecting previously unselected package libxdmcp6:s390x.
-Unpacking libxdmcp6:s390x (from .../libxdmcp6_1%3a1.1.1-1_s390x.deb) ...
-Selecting previously unselected package libxcb1:s390x.
-Unpacking libxcb1:s390x (from .../libxcb1_1.8.1-2_s390x.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:s390x.
-Unpacking libx11-6:s390x (from .../libx11-6_2%3a1.5.0-1_s390x.deb) ...
-Selecting previously unselected package libxcb-render0:s390x.
-Unpacking libxcb-render0:s390x (from .../libxcb-render0_1.8.1-2_s390x.deb) ...
Selecting previously unselected package libxcb-shm0:s390x.
-Unpacking libxcb-shm0:s390x (from .../libxcb-shm0_1.8.1-2_s390x.deb) ...
-Selecting previously unselected package libxext6:s390x.
-Unpacking libxext6:s390x (from .../libxext6_2%3a1.3.1-2_s390x.deb) ...
+Unpacking libxcb-shm0:s390x (from .../libxcb-shm0_1.9.1-3_s390x.deb) ...
Selecting previously unselected package libxrender1:s390x.
-Unpacking libxrender1:s390x (from .../libxrender1_1%3a0.9.7-1_s390x.deb) ...
+Unpacking libxrender1:s390x (from .../libxrender1_1%3a0.9.8-1_s390x.deb) ...
Selecting previously unselected package libcairo2:s390x.
-Unpacking libcairo2:s390x (from .../libcairo2_1.12.14-4_s390x.deb) ...
-Selecting previously unselected package libffi6:s390x.
-Unpacking libffi6:s390x (from .../libffi6_3.0.13-4_s390x.deb) ...
+Unpacking libcairo2:s390x (from .../libcairo2_1.12.14-5_s390x.deb) ...
Selecting previously unselected package libglib2.0-0:s390x.
-Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.36.1-2build1_s390x.deb) ...
+Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.36.3-3_s390x.deb) ...
Selecting previously unselected package libcroco3:s390x.
Unpacking libcroco3:s390x (from .../libcroco3_0.6.8-2_s390x.deb) ...
Selecting previously unselected package libdatrie1:s390x.
Unpacking libdatrie1:s390x (from .../libdatrie1_0.2.6-2_s390x.deb) ...
-Selecting previously unselected package libunistring0:s390x.
-Unpacking libunistring0:s390x (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
-Selecting previously unselected package libgettextpo0:s390x.
-Unpacking libgettextpo0:s390x (from .../libgettextpo0_0.18.1.1-10_s390x.deb) ...
-Selecting previously unselected package gcc-4.8-base:s390x.
-Unpacking gcc-4.8-base:s390x (from .../gcc-4.8-base_4.8.0-7_s390x.deb) ...
Selecting previously unselected package libgfortran3:s390x.
-Unpacking libgfortran3:s390x (from .../libgfortran3_4.8.0-7_s390x.deb) ...
+Unpacking libgfortran3:s390x (from .../libgfortran3_4.8.1-8_s390x.deb) ...
+Selecting previously unselected package libgraphite2-3:s390x.
+Unpacking libgraphite2-3:s390x (from .../libgraphite2-3_1.2.3-1_s390x.deb) ...
+Selecting previously unselected package libharfbuzz0a:s390x.
+Unpacking libharfbuzz0a:s390x (from .../libharfbuzz0a_0.9.19-1_s390x.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:s390x.
@@ -1406,12 +1407,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:s390x.
Unpacking libthai0:s390x (from .../libthai0_0.1.19-2_s390x.deb) ...
-Selecting previously unselected package libxft2:s390x.
-Unpacking libxft2:s390x (from .../libxft2_2.3.1-1_s390x.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_s390x.deb) ...
-Selecting previously unselected package libpango1.0-0:s390x.
-Unpacking libpango1.0-0:s390x (from .../libpango1.0-0_1.30.0-1_s390x.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_s390x.deb) ...
+Selecting previously unselected package libpango-1.0-0:s390x.
+Unpacking libpango-1.0-0:s390x (from .../libpango-1.0-0_1.32.5-5+b1_s390x.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:s390x.
+Unpacking libpangoft2-1.0-0:s390x (from .../libpangoft2-1.0-0_1.32.5-5+b1_s390x.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:s390x.
+Unpacking libpangocairo-1.0-0:s390x (from .../libpangocairo-1.0-0_1.32.5-5+b1_s390x.deb) ...
Selecting previously unselected package libpaper1:s390x.
Unpacking libpaper1:s390x (from .../libpaper1_1.1.24+nmu2_s390x.deb) ...
Selecting previously unselected package libpcrecpp0:s390x.
@@ -1421,47 +1424,48 @@ Unpacking libsm6:s390x (from .../libsm6_2%3a1.2.1-2_s390x.deb) ...
Selecting previously unselected package libjbig0:s390x.
Unpacking libjbig0:s390x (from .../libjbig0_2.0-2_s390x.deb) ...
Selecting previously unselected package libtiff5:s390x.
-Unpacking libtiff5:s390x (from .../libtiff5_4.0.2-6_s390x.deb) ...
+Unpacking libtiff5:s390x (from .../libtiff5_4.0.3-1_s390x.deb) ...
+Selecting previously unselected package libunistring0:s390x.
+Unpacking libunistring0:s390x (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
+Selecting previously unselected package libxft2:s390x.
+Unpacking libxft2:s390x (from .../libxft2_2.3.1-1_s390x.deb) ...
Selecting previously unselected package libxss1:s390x.
Unpacking libxss1:s390x (from .../libxss1_1%3a1.2.2-1_s390x.deb) ...
Selecting previously unselected package libxt6:s390x.
-Unpacking libxt6:s390x (from .../libxt6_1%3a1.1.3-1_s390x.deb) ...
-Selecting previously unselected package libmpc3:s390x.
-Unpacking libmpc3:s390x (from .../libmpc3_1.0.1-1_s390x.deb) ...
+Unpacking libxt6:s390x (from .../libxt6_1%3a1.1.3-1+deb7u1_s390x.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_s390x.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_s390x.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_s390x.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_s390x.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Preparing to replace libstdc++6-4.6-dev 4.6.3-15 (using .../libstdc++6-4.6-dev_4.6.4-2_s390x.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
+Preparing to replace libstdc++6-4.6-dev 4.6.4-2 (using .../libstdc++6-4.6-dev_4.6.4-4_s390x.deb) ...
Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.3-15 (using .../g++-4.6_4.6.4-2_s390x.deb) ...
+Preparing to replace g++-4.6 4.6.4-2 (using .../g++-4.6_4.6.4-4_s390x.deb) ...
Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.3-15 (using .../gcc-4.6_4.6.4-2_s390x.deb) ...
+Preparing to replace gcc-4.6 4.6.4-2 (using .../gcc-4.6_4.6.4-4_s390x.deb) ...
Unpacking replacement gcc-4.6 ...
-Preparing to replace cpp-4.6 4.6.3-15 (using .../cpp-4.6_4.6.4-2_s390x.deb) ...
+Preparing to replace cpp-4.6 4.6.4-2 (using .../cpp-4.6_4.6.4-4_s390x.deb) ...
Unpacking replacement cpp-4.6 ...
-Preparing to replace gcc-4.6-base:s390x 4.6.3-15 (using .../gcc-4.6-base_4.6.4-2_s390x.deb) ...
+Preparing to replace gcc-4.6-base:s390x 4.6.4-2 (using .../gcc-4.6-base_4.6.4-4_s390x.deb) ...
Unpacking replacement gcc-4.6-base:s390x ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15+b1_s390x.deb) ...
-Selecting previously unselected package libasprintf-dev:s390x.
-Unpacking libasprintf-dev:s390x (from .../libasprintf-dev_0.18.1.1-10_s390x.deb) ...
-Selecting previously unselected package libgettextpo-dev:s390x.
-Unpacking libgettextpo-dev:s390x (from .../libgettextpo-dev_0.18.1.1-10_s390x.deb) ...
+Preparing to replace cpp 4:4.6.4-1 (using .../cpp_4%3a4.6.4-2_s390x.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_s390x.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_s390x.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Preparing to replace gcc 4:4.6.4-1 (using .../gcc_4%3a4.6.4-2_s390x.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_s390x.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-4_s390x.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_s390x.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.4-2_s390x.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_s390x.deb) ...
Selecting previously unselected package libblas-dev.
@@ -1475,9 +1479,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_s390x.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_s390x.deb) ...
Selecting previously unselected package libtinfo-dev:s390x.
-Unpacking libtinfo-dev:s390x (from .../libtinfo-dev_5.9+20130504-1_s390x.deb) ...
+Unpacking libtinfo-dev:s390x (from .../libtinfo-dev_5.9+20130608-1_s390x.deb) ...
Selecting previously unselected package libncurses5-dev:s390x.
-Unpacking libncurses5-dev:s390x (from .../libncurses5-dev_5.9+20130504-1_s390x.deb) ...
+Unpacking libncurses5-dev:s390x (from .../libncurses5-dev_5.9+20130608-1_s390x.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_s390x.deb) ...
Selecting previously unselected package libpcre3-dev:s390x.
@@ -1497,54 +1501,69 @@ Unpacking unzip (from .../archives/unzip_6.0-9_s390x.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_s390x.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_s390x.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_s390x.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_s390x.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1-1_s390x.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_s390x.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1-1_all.deb) ...
-Setting up libc-dev-bin (2.17-3) ...
-Setting up libc6-dev:s390x (2.17-3) ...
-Setting up libpipeline1:s390x (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:s390x (4.8.1-8) ...
+Setting up libpipeline1:s390x (1.2.4-1) ...
+Setting up libudev0:s390x (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
-Setting up man-db (2.6.3-6) ...
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:s390x (0.18.1.1-10) ...
-Setting up libmagic1:s390x (1:5.14-1) ...
-Setting up libpcre3:s390x (1:8.31-2) ...
-Setting up libxml2:s390x (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:s390x (2.1.0-3) ...
+Setting up libasprintf0c2:s390x (0.18.3-1) ...
+Setting up libmagic1:s390x (1:5.14-2) ...
+Setting up libxml2:s390x (2.9.1+dfsg1-2) ...
+Setting up libdrm2:s390x (2.4.45-3) ...
+Setting up libglapi-mesa:s390x (9.1.4-1) ...
+Setting up libxau6:s390x (1:1.0.8-1) ...
+Setting up libxdmcp6:s390x (1:1.1.1-1) ...
+Setting up libxcb1:s390x (1.9.1-3) ...
+Setting up libxcb-dri2-0:s390x (1.9.1-3) ...
+Setting up libgbm1:s390x (9.1.4-1) ...
+Setting up libffi6:s390x (3.0.13-4) ...
+Setting up libwayland-client0:s390x (1.1.0-2) ...
+Setting up libwayland-server0:s390x (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:s390x (2:1.6.0-1) ...
+Setting up libx11-xcb1:s390x (2:1.6.0-1) ...
+Setting up libxcb-render0:s390x (1.9.1-3) ...
+Setting up libxcb-shape0:s390x (1.9.1-3) ...
+Setting up libxcb-xfixes0:s390x (1.9.1-3) ...
+Setting up libegl1-mesa:s390x (9.1.4-1) ...
+Setting up libexpat1:s390x (2.1.0-4) ...
Setting up libfreetype6:s390x (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:s390x (2.9.0-7.1) ...
-Setting up libpixman-1-0:s390x (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:s390x (2.10.2-2) ...
+Setting up libxcb-glx0:s390x (1.9.1-3) ...
+Setting up libxfixes3:s390x (1:5.0.1-1) ...
+Setting up libxdamage1:s390x (1:1.1.4-1) ...
+Setting up libxext6:s390x (2:1.3.2-1) ...
+Setting up libxxf86vm1:s390x (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:s390x (9.1.4-1) ...
+Setting up libpixman-1-0:s390x (0.30.0-3) ...
Setting up libpng12-0:s390x (1.2.49-4) ...
-Setting up libxau6:s390x (1:1.0.7-1) ...
-Setting up libxdmcp6:s390x (1:1.1.1-1) ...
-Setting up libxcb1:s390x (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:s390x (2:1.5.0-1) ...
-Setting up libxcb-render0:s390x (1.8.1-2) ...
-Setting up libxcb-shm0:s390x (1.8.1-2) ...
-Setting up libxext6:s390x (2:1.3.1-2) ...
-Setting up libxrender1:s390x (1:0.9.7-1) ...
-Setting up libcairo2:s390x (1.12.14-4) ...
-Setting up libffi6:s390x (3.0.13-4) ...
-Setting up libglib2.0-0:s390x (2.36.1-2build1) ...
+Setting up libxcb-shm0:s390x (1.9.1-3) ...
+Setting up libxrender1:s390x (1:0.9.8-1) ...
+Setting up libcairo2:s390x (1.12.14-5) ...
+Setting up libglib2.0-0:s390x (2.36.3-3) ...
No schema files found: doing nothing.
Setting up libcroco3:s390x (0.6.8-2) ...
Setting up libdatrie1:s390x (0.2.6-2) ...
-Setting up libunistring0:s390x (0.9.3-5+b1) ...
-Setting up libgettextpo0:s390x (0.18.1.1-10) ...
-Setting up gcc-4.8-base:s390x (4.8.0-7) ...
-Setting up libgfortran3:s390x (4.8.0-7) ...
+Setting up libgfortran3:s390x (4.8.1-8) ...
+Setting up libgraphite2-3:s390x (1.2.3-1) ...
+Setting up libharfbuzz0a:s390x (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
@@ -1552,35 +1571,36 @@ Setting up libice6:s390x (2:1.0.8-2) ...
Setting up libjpeg8:s390x (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:s390x (0.1.19-2) ...
-Setting up libxft2:s390x (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:s390x (1.30.0-1) ...
+Setting up libpango-1.0-0:s390x (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:s390x (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:s390x (1.32.5-5+b1) ...
Setting up libpaper1:s390x (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:s390x (1:8.31-2) ...
Setting up libsm6:s390x (2:1.2.1-2) ...
Setting up libjbig0:s390x (2.0-2) ...
-Setting up libtiff5:s390x (4.0.2-6) ...
+Setting up libtiff5:s390x (4.0.3-1) ...
+Setting up libunistring0:s390x (0.9.3-5+b1) ...
+Setting up libxft2:s390x (2.3.1-1) ...
Setting up libxss1:s390x (1:1.2.2-1) ...
-Setting up libxt6:s390x (1:1.1.3-1) ...
-Setting up libmpc3:s390x (1.0.1-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up gcc-4.6-base:s390x (4.6.4-2) ...
-Setting up cpp-4.6 (4.6.4-2) ...
-Setting up gcc-4.6 (4.6.4-2) ...
-Setting up html2text (1.3.2a-15+b1) ...
-Setting up libasprintf-dev:s390x (0.18.1.1-10) ...
-Setting up libgettextpo-dev:s390x (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:s390x (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gcc-4.6-base:s390x (4.6.4-4) ...
+Setting up cpp-4.6 (4.6.4-4) ...
+Setting up gcc-4.6 (4.6.4-4) ...
+Setting up cpp (4:4.6.4-2) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up gcc (4:4.6.4-2) ...
+Setting up gfortran-4.6 (4.6.4-4) ...
+Setting up gfortran (4:4.6.4-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -1592,8 +1612,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:s390x (5.9+20130504-1) ...
-Setting up libncurses5-dev:s390x (5.9+20130504-1) ...
+Setting up libtinfo-dev:s390x (5.9+20130608-1) ...
+Setting up libncurses5-dev:s390x (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:s390x (1:8.31-2) ...
Setting up zlib1g-dev:s390x (1:1.2.8.dfsg-1) ...
@@ -1603,25 +1623,26 @@ Setting up libreadline-dev:s390x (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1-1) ...
-Setting up g++-4.6 (4.6.4-2) ...
-Setting up libstdc++6-4.6-dev (4.6.4-2) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
-Checking correctness of dependencies...
-Kernel: Linux 2.6.32-5-s390x s390x (s390x)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6-dev_2.17-3 libstdc++6_4.7.2-5 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.2.41-2
-Package versions: apt_0.9.7.8+b1 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.20-3 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 debconf_1.5.49 debconf-i18n_1.5.49 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1:5.14-1 f [...]
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
+Setting up g++-4.6 (4.6.4-4) ...
+Setting up libstdc++6-4.6-dev (4.6.4-4) ...
+Processing triggers for libc-bin ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: Linux 2.6.32-5-s390x s390 (s390x)
+Toolchain package versions: binutils_2.23.52.20130612-1 dpkg-dev_1.16.10 g++-4.6_4.6.4-4 gcc-4.6_4.6.4-4 libc6-dev_2.17-5 libstdc++6_4.8.1-8 libstdc++6-4.6-dev_4.6.4-4 linux-libc-dev_3.9.5-1
+Package versions: apt_0.9.8.2 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130612-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.4 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.20-3 cpp_4:4.6.4-2 cpp-4.6_4.6.4-4 dash_0.5.7-3 debconf_1.5.50 debconf-i18n_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.19-2 file_1:5 [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -1631,28 +1652,48 @@ Package versions: apt_0.9.7.8+b1 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+DEB_BUILD_OPTIONS=parallel=2
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-s390x-sbuild
+SCHROOT_CHROOT_NAME=sid-s390x-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-s390x-sbuild-003ba854-519c-476f-8b9a-5d8e47453ccb
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+TERM=xterm
+USER=buildd
+USERNAME=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture s390x
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -1668,7 +1709,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -1687,26 +1728,26 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -1716,13 +1757,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -1730,7 +1771,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -1766,9 +1807,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -1798,79 +1839,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_s390x.deb'.
- dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_s390x.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_s390x.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zemlinsky) <buildd_s390x-zemlinsky at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_s390x.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1414
+Build finished at 20130804-0936
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_s390x.changes:
+─────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_s390x.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: s390x
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: s390/s390x Build Daemon (zemlinsky) <buildd_s390x-zemlinsky at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
- .
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- 7cca32fa82c32154b9646b83f2c90c3707b99ae6 1617786 r-bioc-limma_3.16.3~dfsg-1_s390x.deb
+ 0ba2de265856cf81fd8bbdb5d76316c661198d36 863394 r-bioc-limma_3.16.7~dfsg-1_s390x.deb
Checksums-Sha256:
- 51760bf4b700252d1a209110a5e1c788b419f0b9375e1e6caca037160d56a7fe 1617786 r-bioc-limma_3.16.3~dfsg-1_s390x.deb
+ c6f43e532c4b5e6dfac1a16e79a39406400764b1814470dc4f83da40adf35ee9 863394 r-bioc-limma_3.16.7~dfsg-1_s390x.deb
Files:
- 4f33d1f52ae5d9b7fb9a35af20abcdd1 1617786 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_s390x.deb
+ afafd999773c826a89678cdf1425d708 863394 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_s390x.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_s390x.deb
+r-bioc-limma_3.16.7~dfsg-1_s390x.deb
────────────────────────────────────
new debian package, version 2.0.
- size 1617786 bytes: control archive= 1667 bytes.
+ size 863394 bytes: control archive=1632 bytes.
773 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: s390x
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1847
- Depends: libc6 (>= 2.2), r-base-core (>= 3.0.1-1)
+ Installed-Size: 1060
+ Depends: libc6 (>= 2.2), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -1882,89 +1920,91 @@ r-bioc-limma_3.16.3~dfsg-1_s390x.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 10085 2013-05-17 14:14 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 1056 2013-05-17 14:14 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 206552 2013-05-17 14:14 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 4120 2013-05-17 14:14 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2013-05-17 14:14 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 37337 2013-05-17 14:14 ./usr/lib/R/site-library/limma/html/00Index.html
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10632 2013-05-17 14:14 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1398 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 494828 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3414 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 2567 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 6703 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2046 2013-05-17 14:14 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 1711 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 673 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 806089 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 45597 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 102936 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 987 2013-05-17 14:14 ./usr/lib/R/site-library/limma/DESCRIPTION
--rw-r--r-- root/root 11214 2013-05-17 14:14 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 541 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 219 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 5944 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 3089 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 1063 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6375 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 963 2013-05-17 14:14 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/share/doc/r-bioc-limma/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/share/doc/r-bioc-limma/tests/
--rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 1711 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 45597 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 104280 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 673 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 10085 2013-08-04 09:36 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 10552 2013-08-04 09:36 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 11214 2013-08-04 09:36 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 207868 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 1056 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 4122 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 987 2013-08-04 09:36 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1392 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 6742 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 492365 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 2577 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 3430 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 2095 2013-08-04 09:36 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 963 2013-08-04 09:36 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 1069 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 5952 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 3098 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 219 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 6386 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 542 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 37564 2013-08-04 09:36 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2013-08-04 09:36 ./usr/lib/R/site-library/limma/html/R.css
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390x-sbuild-05de5256-6c26-4dd9-b80b-c80fe40f1f51/sid-s390x-sbuild/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: s390x
-Build-Space: 5884
-Build-Time: 9
+Build Architecture: s390x
+Build-Space: 3544
+Build-Time: 16
Distribution: sid
-Install-Time: 44
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: s390x
+Install-Time: 26
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: s390
Package: r-bioc-limma
-Package-Time: 87
-Source-Version: 3.16.3~dfsg-1
-Space: 5884
+Package-Time: 59
+Source-Version: 3.16.7~dfsg-1
+Space: 3544
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1414
-Build needed 00:01:27, 5884k disc space
-Signature with key '06DAB0BE' requested:
+Finished at 20130804-0936
+Build needed 00:00:59, 3544k disc space
+Signature with key '52DC96B8' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_s390x.changes 52DC96B8
+
+Successfully signed changes file
diff --git a/s390x.log b/s390x.log
index 7b6a34b..d8c52b2 100644
--- a/s390x.log
+++ b/s390x.log
@@ -1,66 +1,75 @@
-From buildd at zandonai.debian.org Fri May 17 14:14:39 2013
-Return-path: <buildd at zandonai.debian.org>
-Received: from mailly.debian.org ([82.195.75.114])
+From buildd at zemlinsky.debian.org Sun Aug 04 09:36:52 2013
+Return-path: <buildd at zemlinsky.debian.org>
+Received: from mailly.debian.org ([2001:41b8:202:deb:6564:a62:52c3:4b72])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
CN=mailly.debian.org, EMAIL=hostmaster at mailly.debian.org (verified)
by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
- (Exim 4.72) (envelope-from <buildd at zandonai.debian.org>)
- id 1UdLQc-0007RT-Qe
- for logs at buildd.debian.org; Fri, 17 May 2013 14:14:38 +0000
-Received: from zandonai.debian.org ([80.245.147.46])
+ (Exim 4.72) (envelope-from <buildd at zemlinsky.debian.org>)
+ id 1V5uk7-0000kB-VF
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 09:36:52 +0000
+Received: from zemlinsky.debian.org ([2001:7c0:400:1337::818f:a006])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=zandonai.debian.org,
- EMAIL=hostmaster at zandonai.debian.org (verified)
- by mailly.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:256)
- (Exim 4.80) (envelope-from <buildd at zandonai.debian.org>)
- id 1UdLQc-0002mk-1D; Fri, 17 May 2013 14:14:38 +0000
-Received: from buildd by zandonai.debian.org with local (Exim 4.72)
- (envelope-from <buildd at zandonai.debian.org>)
- id 1UdLQb-0007zd-LF; Fri, 17 May 2013 14:14:37 +0000
-Message-Id: <E1UdLQb-0007zd-LF at zandonai.debian.org>
-MIME-Version: 1.0
+ CN=zemlinsky.debian.org,
+ EMAIL=hostmaster at zemlinsky.debian.org (verified)
+ by mailly.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
+ (Exim 4.80) (envelope-from <buildd at zemlinsky.debian.org>)
+ id 1V5uk7-0006An-1Y; Sun, 04 Aug 2013 09:36:51 +0000
+Received: from buildd by zemlinsky.debian.org with local (Exim 4.80)
+ (envelope-from <buildd at zemlinsky.debian.org>)
+ id 1V5uk5-0007nc-El; Sun, 04 Aug 2013 09:36:49 +0000
Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Fri, 17 May 2013 14:14:37 +0000
-From: buildd on zandonai <buildd at zandonai.debian.org>
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 09:36:49 +0000
+From: buildd on zemlinsky <buildd at zemlinsky.debian.org>
To: phil+buildd at philkern.de,logs at buildd.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on s390x
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on s390x
(dist=sid)
-Key-Id: 06DAB0BE
+Key-Id: 52DC96B8
+Message-Id: <E1V5uk5-0007nc-El at zemlinsky.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on zandonai.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on zemlinsky.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (s390x) 17 May 2013 14:13 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (s390x) 04 Aug 2013 09:35 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: s390x
-Get:1 http://ftp.de.debian.org unstable Release.gpg [1571 B]
-Get:2 http://ftp.de.debian.org unstable Release [203 kB]
-Get:3 http://incoming.debian.org unstable Release.gpg [1571 B]
-Get:4 http://ftp.de.debian.org unstable/main Sources [6729 kB]
-Get:5 http://incoming.debian.org buildd-unstable Release.gpg [1571 B]
-Get:6 http://incoming.debian.org unstable Release [203 kB]
-Get:7 http://incoming.debian.org buildd-unstable Release [109 kB]
-Get:8 http://incoming.debian.org unstable/main Sources [6729 kB]
-Get:9 http://ftp.de.debian.org unstable/contrib Sources [53.7 kB]
-Get:10 http://ftp.de.debian.org unstable/non-free Sources [103 kB]
-Get:11 http://ftp.de.debian.org unstable/main s390x Packages [6147 kB]
-Get:12 http://ftp.de.debian.org unstable/contrib s390x Packages [36.6 kB]
-Get:13 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:14 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:15 http://incoming.debian.org unstable/main s390x Packages [6147 kB]
-Get:16 http://incoming.debian.org unstable/contrib s390x Packages [36.6 kB]
-Get:17 http://incoming.debian.org buildd-unstable/main Sources [104 kB]
-Get:18 http://incoming.debian.org buildd-unstable/contrib Sources [873 B]
-Get:19 http://incoming.debian.org buildd-unstable/non-free Sources [2683 B]
-Get:20 http://incoming.debian.org buildd-unstable/main s390x Packages [40.4 kB]
-Get:21 http://incoming.debian.org buildd-unstable/contrib s390x Packages [14 B]
-Fetched 26.8 MB in 24s (1087 kB/s)
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: s390
+Host Architecture: s390x
+Build Architecture: s390x
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-noui1p/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-noui1p' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-s390x-sbuild-003ba854-519c-476f-8b9a-5d8e47453ccb' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://ftp-stud.hs-esslingen.de unstable InRelease [204 kB]
+Hit http://ftp-stud.hs-esslingen.de unstable/main Sources
+Hit http://ftp-stud.hs-esslingen.de unstable/contrib Sources
+Hit http://ftp-stud.hs-esslingen.de unstable/non-free Sources
+Hit http://ftp-stud.hs-esslingen.de unstable/main s390x Packages
+Hit http://ftp-stud.hs-esslingen.de unstable/contrib s390x Packages
+Get:2 http://incoming.debian.org unstable InRelease [204 kB]
+Get:3 http://incoming.debian.org buildd-unstable InRelease [111 kB]
+Get:4 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:5 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:6 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:7 http://incoming.debian.org unstable/main s390x Packages [6183 kB]
+Get:8 http://incoming.debian.org unstable/contrib s390x Packages [37.1 kB]
+Get:9 http://incoming.debian.org buildd-unstable/main Sources [100 kB]
+Get:10 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:11 http://incoming.debian.org buildd-unstable/non-free Sources [2795 B]
+Get:12 http://incoming.debian.org buildd-unstable/main s390x Packages [74.5 kB]
+Get:13 http://incoming.debian.org buildd-unstable/contrib s390x Packages [14 B]
+Fetched 14.0 MB in 9s (1451 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -80,337 +89,344 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 0s (2670 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (247 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-FcTYRK/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: already installed (1.18.4-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
-Removing negative dependencies:
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 50 not upgraded.
+Need to get 0 B/710 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 10979 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-Covdkr/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 38 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.1)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-1)
-bsdutils: already installed (1:2.20.1-5.3)
-coreutils: already installed (8.20-3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.13-38)
-login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.3)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-21)
-sed: already installed (4.2.1-10)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-5)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (2.13-38)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130516
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following extra packages will be installed:
- bsdmainutils cpp-4.6 file fontconfig fontconfig-config fonts-dejavu-core
- g++-4.6 gcc-4.6 gcc-4.6-base gcc-4.8-base gettext gettext-base gfortran
- gfortran-4.6 groff-base html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6 libc6-dev
- libcairo2 libcroco3 libdatrie1 libexpat1 libffi6 libfontconfig1 libfreetype6
- libgettextpo-dev libgettextpo0 libgfortran3 libglib2.0-0 libice6 libjbig0
- libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5
- libncurses5-dev libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev
+ bsdmainutils cdbs cpp cpp-4.6 debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core g++-4.6 gcc gcc-4.6 gcc-4.6-base gcc-4.8-base gettext
+ gettext-base gfortran gfortran-4.6 groff-base intltool-debian libasprintf0c2
+ libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libdrm2
+ libegl1-mesa libexpat1 libffi6 libfontconfig1 libfreetype6 libgbm1 libgcc1
+ libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0 libgomp1
+ libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev
libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
- libreadline-dev libreadline6-dev libsm6 libstdc++6-4.6-dev libthai-data
- libthai0 libtiff5 libtinfo-dev libtinfo5 libunistring0 libx11-6 libx11-data
- libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
- libxml2 libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf r-base-core
- tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g
+ libreadline-dev libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev
+ libthai-data libthai0 libtiff5 libtinfo-dev libudev0 libunistring0
+ libwayland-client0 libwayland-server0 libx11-6 libx11-data libx11-xcb1
+ libxau6 libxcb-dri2-0 libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0
+ libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2
+ libxml2 libxrender1 libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core
+ r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make
- g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-4.6-multilib
+ wamerican wordlist whois vacation devscripts cpp-doc gcc-4.6-locales dh-make
+ g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-multilib manpages-dev
+ autoconf automake1.9 libtool flex bison gdb gcc-doc gcc-4.6-multilib
libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg libquadmath-dbg libmudflap0-dbg
- libcloog-ppl0 libppl-c2 libppl7 gettext-doc gfortran-multilib gfortran-doc
- gfortran-4.6-multilib gfortran-4.6-doc libgfortran3-dbg groff glibc-doc
- ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp
- ttf-arphic-gkai00mp ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser
- libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
- texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
- texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
- texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin
+ libcloog-ppl1 libcloog-ppl0 libppl-c4 libppl12 libppl9 gettext-doc
+ gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc
+ libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
+ ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp
+ libstdc++6-4.6-doc less www-browser libmail-box-perl r-doc-info r-doc-pdf
+ r-mathlib r-base-html texlive-base texlive-latex-base
+ texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
+ texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
+ texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint manpages-dev libglib2.0-data
- shared-mime-info libgpm2 xml-core libmail-sendmail-perl r-recommended
- r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
- fonts-dejavu-core gcc-4.8-base gettext gettext-base gfortran gfortran-4.6
- groff-base html2text intltool-debian libasprintf-dev libasprintf0c2
- libblas-dev libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1
- libffi6 libfontconfig1 libfreetype6 libgettextpo-dev libgettextpo0
- libgfortran3 libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5-dev libpango1.0-0
- libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0 libpipeline1
- libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev libreadline6-dev
- libsm6 libthai-data libthai0 libtiff5 libtinfo-dev libunistring0 libx11-6
- libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
- libxft2 libxml2 libxrender1 libxss1 libxt6 man-db po-debconf r-base-core
- r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
- zlib1g-dev
+ fonts-dejavu-core gettext gettext-base gfortran gfortran-4.6 groff-base
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0
+ libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
+ libtinfo-dev libudev0 libunistring0 libwayland-client0 libwayland-server0
+ libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0
+ libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1
+ libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6
+ libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base libc-dev-bin libc6 libc6-dev
- libncurses5 libstdc++6-4.6-dev libtinfo5 ncurses-bin zlib1g
-12 upgraded, 84 newly installed, 0 to remove and 26 not upgraded.
-Need to get 82.5 MB of archives.
-After this operation, 130 MB of additional disk space will be used.
-Get:1 http://ftp.de.debian.org/debian/ unstable/main libtinfo5 s390x 5.9+20130504-1 [301 kB]
-Get:2 http://ftp.de.debian.org/debian/ unstable/main libncurses5 s390x 5.9+20130504-1 [121 kB]
-Get:3 http://ftp.de.debian.org/debian/ unstable/main ncurses-bin s390x 5.9+20130504-1 [366 kB]
-Get:4 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libc6-dev s390x 2.17-3 [2955 kB]
-Get:5 http://ftp.de.debian.org/debian/ unstable/main zlib1g s390x 1:1.2.8.dfsg-1 [94.1 kB]
-Get:6 http://ftp.de.debian.org/debian/ unstable/main libpipeline1 s390x 1.2.3-1 [41.6 kB]
-Get:7 http://ftp.de.debian.org/debian/ unstable/main groff-base s390x 1.22.2-2 [738 kB]
-Get:8 http://ftp.de.debian.org/debian/ unstable/main bsdmainutils s390x 9.0.5 [216 kB]
-Get:9 http://ftp.de.debian.org/debian/ unstable/main man-db s390x 2.6.3-6 [888 kB]
-Get:10 http://ftp.de.debian.org/debian/ unstable/main libasprintf0c2 s390x 0.18.1.1-10 [27.2 kB]
-Get:11 http://ftp.de.debian.org/debian/ unstable/main libmagic1 s390x 1:5.14-1 [214 kB]
-Get:12 http://ftp.de.debian.org/debian/ unstable/main libpcre3 s390x 1:8.31-2 [259 kB]
-Get:13 http://ftp.de.debian.org/debian/ unstable/main libxml2 s390x 2.8.0+dfsg1-7+nmu1 [902 kB]
-Get:14 http://ftp.de.debian.org/debian/ unstable/main libexpat1 s390x 2.1.0-3 [145 kB]
-Get:15 http://ftp.de.debian.org/debian/ unstable/main libfreetype6 s390x 2.4.9-1.1 [465 kB]
-Get:16 http://ftp.de.debian.org/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:17 http://ftp.de.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:18 http://ftp.de.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:19 http://ftp.de.debian.org/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:20 http://ftp.de.debian.org/debian/ unstable/main libfontconfig1 s390x 2.9.0-7.1 [302 kB]
-Get:21 http://ftp.de.debian.org/debian/ unstable/main libpixman-1-0 s390x 0.26.0-4 [368 kB]
-Get:22 http://ftp.de.debian.org/debian/ unstable/main libpng12-0 s390x 1.2.49-4 [193 kB]
-Get:23 http://ftp.de.debian.org/debian/ unstable/main libxau6 s390x 1:1.0.7-1 [18.6 kB]
-Get:24 http://ftp.de.debian.org/debian/ unstable/main libxdmcp6 s390x 1:1.1.1-1 [26.5 kB]
-Get:25 http://ftp.de.debian.org/debian/ unstable/main libxcb1 s390x 1.8.1-2 [53.1 kB]
-Get:26 http://ftp.de.debian.org/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:27 http://ftp.de.debian.org/debian/ unstable/main libx11-6 s390x 2:1.5.0-1 [917 kB]
-Get:28 http://ftp.de.debian.org/debian/ unstable/main libxcb-render0 s390x 1.8.1-2 [19.2 kB]
-Get:29 http://ftp.de.debian.org/debian/ unstable/main libxcb-shm0 s390x 1.8.1-2 [10.4 kB]
-Get:30 http://ftp.de.debian.org/debian/ unstable/main libxext6 s390x 2:1.3.1-2 [56.8 kB]
-Get:31 http://ftp.de.debian.org/debian/ unstable/main libxrender1 s390x 1:0.9.7-1 [33.6 kB]
-Get:32 http://ftp.de.debian.org/debian/ unstable/main libcairo2 s390x 1.12.14-4 [1008 kB]
-Get:33 http://ftp.de.debian.org/debian/ unstable/main libffi6 s390x 3.0.13-4 [21.6 kB]
-Get:34 http://ftp.de.debian.org/debian/ unstable/main libglib2.0-0 s390x 2.36.1-2build1 [2010 kB]
-Get:35 http://ftp.de.debian.org/debian/ unstable/main libdatrie1 s390x 0.2.6-2 [30.6 kB]
-Get:36 http://ftp.de.debian.org/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
-Get:37 http://ftp.de.debian.org/debian/ unstable/main libgettextpo0 s390x 0.18.1.1-10 [158 kB]
-Get:38 http://ftp.de.debian.org/debian/ unstable/main gcc-4.8-base s390x 4.8.0-7 [148 kB]
-Get:39 http://ftp.de.debian.org/debian/ unstable/main libgfortran3 s390x 4.8.0-7 [359 kB]
-Get:40 http://ftp.de.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:41 http://ftp.de.debian.org/debian/ unstable/main libice6 s390x 2:1.0.8-2 [65.6 kB]
-Get:42 http://ftp.de.debian.org/debian/ unstable/main libjpeg8 s390x 8d-1 [190 kB]
-Get:43 http://ftp.de.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:44 http://ftp.de.debian.org/debian/ unstable/main libthai0 s390x 0.1.19-2 [44.0 kB]
-Get:45 http://ftp.de.debian.org/debian/ unstable/main libxft2 s390x 2.3.1-1 [63.6 kB]
-Get:46 http://ftp.de.debian.org/debian/ unstable/main fontconfig s390x 2.9.0-7.1 [351 kB]
-Get:47 http://ftp.de.debian.org/debian/ unstable/main libpango1.0-0 s390x 1.30.0-1 [473 kB]
-Get:48 http://ftp.de.debian.org/debian/ unstable/main libpaper1 s390x 1.1.24+nmu2 [22.0 kB]
-Get:49 http://ftp.de.debian.org/debian/ unstable/main libpcrecpp0 s390x 1:8.31-2 [128 kB]
-Get:50 http://ftp.de.debian.org/debian/ unstable/main libsm6 s390x 2:1.2.1-2 [34.9 kB]
-Get:51 http://ftp.de.debian.org/debian/ unstable/main libjbig0 s390x 2.0-2 [35.7 kB]
-Get:52 http://ftp.de.debian.org/debian/ unstable/main libtiff5 s390x 4.0.2-6 [245 kB]
-Get:53 http://ftp.de.debian.org/debian/ unstable/main libxss1 s390x 1:1.2.2-1 [17.5 kB]
-Get:54 http://ftp.de.debian.org/debian/ unstable/main libxt6 s390x 1:1.1.3-1 [216 kB]
-Get:55 http://ftp.de.debian.org/debian/ unstable/main libmpc3 s390x 1.0.1-1 [45.1 kB]
-Get:56 http://ftp.de.debian.org/debian/ unstable/main file s390x 1:5.14-1 [54.4 kB]
-Get:57 http://ftp.de.debian.org/debian/ unstable/main gettext-base s390x 0.18.1.1-10 [156 kB]
-Get:58 http://ftp.de.debian.org/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:59 http://ftp.de.debian.org/debian/ unstable/main libstdc++6-4.6-dev s390x 4.6.4-2 [1704 kB]
-Get:60 http://ftp.de.debian.org/debian/ unstable/main g++-4.6 s390x 4.6.4-2 [5467 kB]
-Get:61 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libc-dev-bin s390x 2.17-3 [234 kB]
-Get:62 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libc6 s390x 2.17-3 [4602 kB]
-Get:63 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6 s390x 4.6.4-2 [4278 kB]
-Get:64 http://ftp.de.debian.org/debian/ unstable/main cpp-4.6 s390x 4.6.4-2 [3957 kB]
-Get:65 http://ftp.de.debian.org/debian/ unstable/main gcc-4.6-base s390x 4.6.4-2 [142 kB]
-Get:66 http://ftp.de.debian.org/debian/ unstable/main html2text s390x 1.3.2a-15+b1 [111 kB]
-Get:67 http://ftp.de.debian.org/debian/ unstable/main libasprintf-dev s390x 0.18.1.1-10 [26.8 kB]
-Get:68 http://ftp.de.debian.org/debian/ unstable/main libgettextpo-dev s390x 0.18.1.1-10 [195 kB]
-Get:69 http://ftp.de.debian.org/debian/ unstable/main gettext s390x 0.18.1.1-10 [1864 kB]
-Get:70 http://ftp.de.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:71 http://ftp.de.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:72 http://ftp.de.debian.org/debian/ unstable/main debhelper all 9.20130516 [708 kB]
-Get:73 http://ftp.de.debian.org/debian/ unstable/main gfortran-4.6 s390x 4.6.4-2 [4699 kB]
-Get:74 http://ftp.de.debian.org/debian/ unstable/main gfortran s390x 4:4.6.3-8 [1132 B]
-Get:75 http://ftp.de.debian.org/debian/ unstable/main libblas3 s390x 1.2.20110419-5 [218 kB]
-Get:76 http://ftp.de.debian.org/debian/ unstable/main libblas-dev s390x 1.2.20110419-5 [227 kB]
-Get:77 http://ftp.de.debian.org/debian/ unstable/main libbz2-dev s390x 1.0.6-4 [39.1 kB]
-Get:78 http://ftp.de.debian.org/debian/ unstable/main libjpeg8-dev s390x 8d-1 [297 kB]
-Get:79 http://ftp.de.debian.org/debian/ unstable/main liblapack3 s390x 3.4.2+dfsg-1 [4152 kB]
-Get:80 http://incoming.debian.org/debian-buildd/ buildd-unstable/main libcroco3 s390x 0.6.8-2 [130 kB]
-Get:81 http://ftp.de.debian.org/debian/ unstable/main liblapack-dev s390x 3.4.2+dfsg-1 [4555 kB]
-Get:82 http://ftp.de.debian.org/debian/ unstable/main libtinfo-dev s390x 5.9+20130504-1 [125 kB]
-Get:83 http://ftp.de.debian.org/debian/ unstable/main libncurses5-dev s390x 5.9+20130504-1 [233 kB]
-Get:84 http://ftp.de.debian.org/debian/ unstable/main libpaper-utils s390x 1.1.24+nmu2 [18.5 kB]
-Get:85 http://ftp.de.debian.org/debian/ unstable/main libpcre3-dev s390x 1:8.31-2 [365 kB]
-Get:86 http://ftp.de.debian.org/debian/ unstable/main zlib1g-dev s390x 1:1.2.8.dfsg-1 [221 kB]
-Get:87 http://ftp.de.debian.org/debian/ unstable/main libpng12-dev s390x 1.2.49-4 [273 kB]
-Get:88 http://ftp.de.debian.org/debian/ unstable/main libreadline6-dev s390x 6.2+dfsg-0.1 [200 kB]
-Get:89 http://ftp.de.debian.org/debian/ unstable/main libreadline-dev s390x 6.2+dfsg-0.1 [898 B]
-Get:90 http://ftp.de.debian.org/debian/ unstable/main zip s390x 3.0-7 [354 kB]
-Get:91 http://ftp.de.debian.org/debian/ unstable/main unzip s390x 6.0-9 [204 kB]
-Get:92 http://ftp.de.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:93 http://ftp.de.debian.org/debian/ unstable/main tcl8.5 s390x 8.5.11-2 [1657 kB]
-Get:94 http://ftp.de.debian.org/debian/ unstable/main tk8.5 s390x 8.5.11-2 [1229 kB]
-Get:95 http://ftp.de.debian.org/debian/ unstable/main r-base-core s390x 3.0.1-1 [21.6 MB]
-Get:96 http://ftp.de.debian.org/debian/ unstable/main r-base-dev all 3.0.1-1 [3896 B]
+ cpp cpp-4.6 g++-4.6 gcc gcc-4.6 gcc-4.6-base gcc-4.8-base libgcc1 libgomp1
+ libstdc++6 libstdc++6-4.6-dev
+11 upgraded, 98 newly installed, 0 to remove and 39 not upgraded.
+Need to get 76.1 MB/76.1 MB of archives.
+After this operation, 133 MB of additional disk space will be used.
+Get:1 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgomp1 s390x 4.8.1-8 [29.5 kB]
+Get:2 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gcc-4.8-base s390x 4.8.1-8 [151 kB]
+Get:3 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libstdc++6 s390x 4.8.1-8 [395 kB]
+Get:4 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgcc1 s390x 1:4.8.1-8 [32.3 kB]
+Get:5 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpipeline1 s390x 1.2.4-1 [42.6 kB]
+Get:6 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libudev0 s390x 175-7.2 [126 kB]
+Get:7 http://ftp-stud.hs-esslingen.de/debian/ unstable/main groff-base s390x 1.22.2-3 [737 kB]
+Get:8 http://ftp-stud.hs-esslingen.de/debian/ unstable/main bsdmainutils s390x 9.0.5 [216 kB]
+Get:9 http://ftp-stud.hs-esslingen.de/debian/ unstable/main man-db s390x 2.6.5-2 [969 kB]
+Get:10 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libasprintf0c2 s390x 0.18.3-1 [30.0 kB]
+Get:11 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libmagic1 s390x 1:5.14-2 [215 kB]
+Get:12 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxml2 s390x 2.9.1+dfsg1-2 [918 kB]
+Get:13 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libdrm2 s390x 2.4.45-3 [469 kB]
+Get:14 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libglapi-mesa s390x 9.1.4-1 [66.6 kB]
+Get:15 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxau6 s390x 1:1.0.8-1 [21.0 kB]
+Get:16 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxdmcp6 s390x 1:1.1.1-1 [26.5 kB]
+Get:17 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb1 s390x 1.9.1-3 [53.5 kB]
+Get:18 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-dri2-0 s390x 1.9.1-3 [13.2 kB]
+Get:19 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgbm1 s390x 9.1.4-1 [351 kB]
+Get:20 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libffi6 s390x 3.0.13-4 [21.6 kB]
+Get:21 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libwayland-client0 s390x 1.1.0-2 [23.9 kB]
+Get:22 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libwayland-server0 s390x 1.1.0-2 [33.9 kB]
+Get:23 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:24 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libx11-6 s390x 2:1.6.0-1 [934 kB]
+Get:25 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libx11-xcb1 s390x 2:1.6.0-1 [153 kB]
+Get:26 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-render0 s390x 1.9.1-3 [19.7 kB]
+Get:27 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-shape0 s390x 1.9.1-3 [11.6 kB]
+Get:28 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-xfixes0 s390x 1.9.1-3 [15.3 kB]
+Get:29 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libegl1-mesa s390x 9.1.4-1 [81.0 kB]
+Get:30 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libexpat1 s390x 2.1.0-4 [145 kB]
+Get:31 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libfreetype6 s390x 2.4.9-1.1 [465 kB]
+Get:32 http://ftp-stud.hs-esslingen.de/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:33 http://ftp-stud.hs-esslingen.de/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:34 http://ftp-stud.hs-esslingen.de/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:35 http://ftp-stud.hs-esslingen.de/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:36 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libfontconfig1 s390x 2.10.2-2 [323 kB]
+Get:37 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-glx0 s390x 1.9.1-3 [34.8 kB]
+Get:38 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxfixes3 s390x 1:5.0.1-1 [23.1 kB]
+Get:39 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxdamage1 s390x 1:1.1.4-1 [15.3 kB]
+Get:40 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxext6 s390x 2:1.3.2-1 [57.4 kB]
+Get:41 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxxf86vm1 s390x 1:1.1.2-1+deb7u1 [19.8 kB]
+Get:42 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgl1-mesa-glx s390x 9.1.4-1 [145 kB]
+Get:43 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpixman-1-0 s390x 0.30.0-3 [432 kB]
+Get:44 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpng12-0 s390x 1.2.49-4 [193 kB]
+Get:45 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxcb-shm0 s390x 1.9.1-3 [10.8 kB]
+Get:46 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxrender1 s390x 1:0.9.8-1 [34.3 kB]
+Get:47 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libcairo2 s390x 1.12.14-5 [1046 kB]
+Get:48 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libglib2.0-0 s390x 2.36.3-3 [2017 kB]
+Get:49 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libcroco3 s390x 0.6.8-2 [130 kB]
+Get:50 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libdatrie1 s390x 0.2.6-2 [30.6 kB]
+Get:51 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgfortran3 s390x 4.8.1-8 [355 kB]
+Get:52 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libgraphite2-3 s390x 1.2.3-1 [66.5 kB]
+Get:53 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libharfbuzz0a s390x 0.9.19-1 [457 kB]
+Get:54 http://ftp-stud.hs-esslingen.de/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:55 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libice6 s390x 2:1.0.8-2 [65.6 kB]
+Get:56 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libjpeg8 s390x 8d-1 [190 kB]
+Get:57 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:58 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libthai0 s390x 0.1.19-2 [44.0 kB]
+Get:59 http://ftp-stud.hs-esslingen.de/debian/ unstable/main fontconfig s390x 2.10.2-2 [377 kB]
+Get:60 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpango-1.0-0 s390x 1.32.5-5+b1 [262 kB]
+Get:61 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpangoft2-1.0-0 s390x 1.32.5-5+b1 [186 kB]
+Get:62 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpangocairo-1.0-0 s390x 1.32.5-5+b1 [173 kB]
+Get:63 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpaper1 s390x 1.1.24+nmu2 [22.0 kB]
+Get:64 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpcrecpp0 s390x 1:8.31-2 [128 kB]
+Get:65 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libsm6 s390x 2:1.2.1-2 [34.9 kB]
+Get:66 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libjbig0 s390x 2.0-2 [35.7 kB]
+Get:67 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libtiff5 s390x 4.0.3-1 [247 kB]
+Get:68 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libunistring0 s390x 0.9.3-5+b1 [442 kB]
+Get:69 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxft2 s390x 2.3.1-1 [63.6 kB]
+Get:70 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxss1 s390x 1:1.2.2-1 [17.5 kB]
+Get:71 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libxt6 s390x 1:1.1.3-1+deb7u1 [216 kB]
+Get:72 http://ftp-stud.hs-esslingen.de/debian/ unstable/main file s390x 1:5.14-2 [54.4 kB]
+Get:73 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gettext-base s390x 0.18.3-1 [163 kB]
+Get:74 http://ftp-stud.hs-esslingen.de/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:75 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libstdc++6-4.6-dev s390x 4.6.4-4 [1720 kB]
+Get:76 http://ftp-stud.hs-esslingen.de/debian/ unstable/main g++-4.6 s390x 4.6.4-4 [5439 kB]
+Get:77 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gcc-4.6 s390x 4.6.4-4 [4255 kB]
+Get:78 http://ftp-stud.hs-esslingen.de/debian/ unstable/main cpp-4.6 s390x 4.6.4-4 [3934 kB]
+Get:79 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gcc-4.6-base s390x 4.6.4-4 [143 kB]
+Get:80 http://ftp-stud.hs-esslingen.de/debian/ unstable/main cpp s390x 4:4.6.4-2 [16.9 kB]
+Get:81 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gettext s390x 0.18.3-1 [1939 kB]
+Get:82 http://ftp-stud.hs-esslingen.de/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:83 http://ftp-stud.hs-esslingen.de/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:84 http://ftp-stud.hs-esslingen.de/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:85 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gcc s390x 4:4.6.4-2 [5002 B]
+Get:86 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gfortran-4.6 s390x 4.6.4-4 [4671 kB]
+Get:87 http://ftp-stud.hs-esslingen.de/debian/ unstable/main gfortran s390x 4:4.6.4-2 [1124 B]
+Get:88 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libblas3 s390x 1.2.20110419-5 [218 kB]
+Get:89 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libblas-dev s390x 1.2.20110419-5 [227 kB]
+Get:90 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libbz2-dev s390x 1.0.6-4 [39.1 kB]
+Get:91 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libjpeg8-dev s390x 8d-1 [297 kB]
+Get:92 http://ftp-stud.hs-esslingen.de/debian/ unstable/main liblapack3 s390x 3.4.2+dfsg-1 [4152 kB]
+Get:93 http://ftp-stud.hs-esslingen.de/debian/ unstable/main liblapack-dev s390x 3.4.2+dfsg-1 [4555 kB]
+Get:94 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libtinfo-dev s390x 5.9+20130608-1 [125 kB]
+Get:95 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libncurses5-dev s390x 5.9+20130608-1 [233 kB]
+Get:96 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpaper-utils s390x 1.1.24+nmu2 [18.5 kB]
+Get:97 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpcre3-dev s390x 1:8.31-2 [365 kB]
+Get:98 http://ftp-stud.hs-esslingen.de/debian/ unstable/main zlib1g-dev s390x 1:1.2.8.dfsg-1 [221 kB]
+Get:99 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libpng12-dev s390x 1.2.49-4 [273 kB]
+Get:100 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libreadline6-dev s390x 6.2+dfsg-0.1 [200 kB]
+Get:101 http://ftp-stud.hs-esslingen.de/debian/ unstable/main libreadline-dev s390x 6.2+dfsg-0.1 [898 B]
+Get:102 http://ftp-stud.hs-esslingen.de/debian/ unstable/main zip s390x 3.0-7 [354 kB]
+Get:103 http://ftp-stud.hs-esslingen.de/debian/ unstable/main unzip s390x 6.0-9 [204 kB]
+Get:104 http://ftp-stud.hs-esslingen.de/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:105 http://ftp-stud.hs-esslingen.de/debian/ unstable/main tcl8.5 s390x 8.5.14-2 [1667 kB]
+Get:106 http://ftp-stud.hs-esslingen.de/debian/ unstable/main tk8.5 s390x 8.5.14-2 [1237 kB]
+Get:107 http://ftp-stud.hs-esslingen.de/debian/ unstable/main r-base-core s390x 3.0.1-6 [21.6 MB]
+Get:108 http://ftp-stud.hs-esslingen.de/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 82.5 MB in 23s (3479 kB/s)
-(Reading database ... 10877 files and directories currently installed.)
-Preparing to replace libc6-dev:s390x 2.13-38 (using .../libc6-dev_2.17-3_s390x.deb) ...
-Unpacking replacement libc6-dev:s390x ...
-Preparing to replace libc-dev-bin 2.13-38 (using .../libc-dev-bin_2.17-3_s390x.deb) ...
-Unpacking replacement libc-dev-bin ...
-Preparing to replace libc6:s390x 2.13-38 (using .../libc6_2.17-3_s390x.deb) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Unpacking replacement libc6:s390x ...
-Setting up libc6:s390x (2.17-3) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Nothing to restart.
-(Reading database ... 10899 files and directories currently installed.)
-Preparing to replace libtinfo5:s390x 5.9-10 (using .../libtinfo5_5.9+20130504-1_s390x.deb) ...
-Unpacking replacement libtinfo5:s390x ...
-Setting up libtinfo5:s390x (5.9+20130504-1) ...
-(Reading database ... 10899 files and directories currently installed.)
-Preparing to replace libncurses5:s390x 5.9-10 (using .../libncurses5_5.9+20130504-1_s390x.deb) ...
-Unpacking replacement libncurses5:s390x ...
-Setting up libncurses5:s390x (5.9+20130504-1) ...
-(Reading database ... 10899 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_s390x.deb) ...
-Unpacking replacement ncurses-bin ...
-Setting up ncurses-bin (5.9+20130504-1) ...
-(Reading database ... 10897 files and directories currently installed.)
-Preparing to replace zlib1g:s390x 1:1.2.7.dfsg-13 (using .../zlib1g_1%3a1.2.8.dfsg-1_s390x.deb) ...
-Unpacking replacement zlib1g:s390x ...
-Setting up zlib1g:s390x (1:1.2.8.dfsg-1) ...
+Fetched 76.1 MB in 5s (13.6 MB/s)
+(Reading database ... 10979 files and directories currently installed.)
+Preparing to replace libgomp1:s390x 4.8.1-3 (using .../libgomp1_4.8.1-8_s390x.deb) ...
+Unpacking replacement libgomp1:s390x ...
+Preparing to replace gcc-4.8-base:s390x 4.8.1-3 (using .../gcc-4.8-base_4.8.1-8_s390x.deb) ...
+Unpacking replacement gcc-4.8-base:s390x ...
+Setting up gcc-4.8-base:s390x (4.8.1-8) ...
+(Reading database ... 10979 files and directories currently installed.)
+Preparing to replace libstdc++6:s390x 4.8.1-3 (using .../libstdc++6_4.8.1-8_s390x.deb) ...
+Unpacking replacement libstdc++6:s390x ...
+Setting up libstdc++6:s390x (4.8.1-8) ...
+Processing triggers for libc-bin ...
+(Reading database ... 10979 files and directories currently installed.)
+Preparing to replace libgcc1:s390x 1:4.8.1-3 (using .../libgcc1_1%3a4.8.1-8_s390x.deb) ...
+Unpacking replacement libgcc1:s390x ...
+Setting up libgcc1:s390x (1:4.8.1-8) ...
+Processing triggers for libc-bin ...
Selecting previously unselected package libpipeline1:s390x.
-(Reading database ... 10897 files and directories currently installed.)
-Unpacking libpipeline1:s390x (from .../libpipeline1_1.2.3-1_s390x.deb) ...
+(Reading database ... 10979 files and directories currently installed.)
+Unpacking libpipeline1:s390x (from .../libpipeline1_1.2.4-1_s390x.deb) ...
+Selecting previously unselected package libudev0:s390x.
+Unpacking libudev0:s390x (from .../libudev0_175-7.2_s390x.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_s390x.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_s390x.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_s390x.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_s390x.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_s390x.deb) ...
Selecting previously unselected package libasprintf0c2:s390x.
-Unpacking libasprintf0c2:s390x (from .../libasprintf0c2_0.18.1.1-10_s390x.deb) ...
+Unpacking libasprintf0c2:s390x (from .../libasprintf0c2_0.18.3-1_s390x.deb) ...
Selecting previously unselected package libmagic1:s390x.
-Unpacking libmagic1:s390x (from .../libmagic1_1%3a5.14-1_s390x.deb) ...
-Selecting previously unselected package libpcre3:s390x.
-Unpacking libpcre3:s390x (from .../libpcre3_1%3a8.31-2_s390x.deb) ...
+Unpacking libmagic1:s390x (from .../libmagic1_1%3a5.14-2_s390x.deb) ...
Selecting previously unselected package libxml2:s390x.
-Unpacking libxml2:s390x (from .../libxml2_2.8.0+dfsg1-7+nmu1_s390x.deb) ...
+Unpacking libxml2:s390x (from .../libxml2_2.9.1+dfsg1-2_s390x.deb) ...
+Selecting previously unselected package libdrm2:s390x.
+Unpacking libdrm2:s390x (from .../libdrm2_2.4.45-3_s390x.deb) ...
+Selecting previously unselected package libglapi-mesa:s390x.
+Unpacking libglapi-mesa:s390x (from .../libglapi-mesa_9.1.4-1_s390x.deb) ...
+Selecting previously unselected package libxau6:s390x.
+Unpacking libxau6:s390x (from .../libxau6_1%3a1.0.8-1_s390x.deb) ...
+Selecting previously unselected package libxdmcp6:s390x.
+Unpacking libxdmcp6:s390x (from .../libxdmcp6_1%3a1.1.1-1_s390x.deb) ...
+Selecting previously unselected package libxcb1:s390x.
+Unpacking libxcb1:s390x (from .../libxcb1_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libxcb-dri2-0:s390x.
+Unpacking libxcb-dri2-0:s390x (from .../libxcb-dri2-0_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libgbm1:s390x.
+Unpacking libgbm1:s390x (from .../libgbm1_9.1.4-1_s390x.deb) ...
+Selecting previously unselected package libffi6:s390x.
+Unpacking libffi6:s390x (from .../libffi6_3.0.13-4_s390x.deb) ...
+Selecting previously unselected package libwayland-client0:s390x.
+Unpacking libwayland-client0:s390x (from .../libwayland-client0_1.1.0-2_s390x.deb) ...
+Selecting previously unselected package libwayland-server0:s390x.
+Unpacking libwayland-server0:s390x (from .../libwayland-server0_1.1.0-2_s390x.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:s390x.
+Unpacking libx11-6:s390x (from .../libx11-6_2%3a1.6.0-1_s390x.deb) ...
+Selecting previously unselected package libx11-xcb1:s390x.
+Unpacking libx11-xcb1:s390x (from .../libx11-xcb1_2%3a1.6.0-1_s390x.deb) ...
+Selecting previously unselected package libxcb-render0:s390x.
+Unpacking libxcb-render0:s390x (from .../libxcb-render0_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libxcb-shape0:s390x.
+Unpacking libxcb-shape0:s390x (from .../libxcb-shape0_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libxcb-xfixes0:s390x.
+Unpacking libxcb-xfixes0:s390x (from .../libxcb-xfixes0_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libegl1-mesa:s390x.
+Unpacking libegl1-mesa:s390x (from .../libegl1-mesa_9.1.4-1_s390x.deb) ...
Selecting previously unselected package libexpat1:s390x.
-Unpacking libexpat1:s390x (from .../libexpat1_2.1.0-3_s390x.deb) ...
+Unpacking libexpat1:s390x (from .../libexpat1_2.1.0-4_s390x.deb) ...
Selecting previously unselected package libfreetype6:s390x.
Unpacking libfreetype6:s390x (from .../libfreetype6_2.4.9-1.1_s390x.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:s390x.
-Unpacking libfontconfig1:s390x (from .../libfontconfig1_2.9.0-7.1_s390x.deb) ...
+Unpacking libfontconfig1:s390x (from .../libfontconfig1_2.10.2-2_s390x.deb) ...
+Selecting previously unselected package libxcb-glx0:s390x.
+Unpacking libxcb-glx0:s390x (from .../libxcb-glx0_1.9.1-3_s390x.deb) ...
+Selecting previously unselected package libxfixes3:s390x.
+Unpacking libxfixes3:s390x (from .../libxfixes3_1%3a5.0.1-1_s390x.deb) ...
+Selecting previously unselected package libxdamage1:s390x.
+Unpacking libxdamage1:s390x (from .../libxdamage1_1%3a1.1.4-1_s390x.deb) ...
+Selecting previously unselected package libxext6:s390x.
+Unpacking libxext6:s390x (from .../libxext6_2%3a1.3.2-1_s390x.deb) ...
+Selecting previously unselected package libxxf86vm1:s390x.
+Unpacking libxxf86vm1:s390x (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_s390x.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:s390x.
+Unpacking libgl1-mesa-glx:s390x (from .../libgl1-mesa-glx_9.1.4-1_s390x.deb) ...
Selecting previously unselected package libpixman-1-0:s390x.
-Unpacking libpixman-1-0:s390x (from .../libpixman-1-0_0.26.0-4_s390x.deb) ...
+Unpacking libpixman-1-0:s390x (from .../libpixman-1-0_0.30.0-3_s390x.deb) ...
Selecting previously unselected package libpng12-0:s390x.
Unpacking libpng12-0:s390x (from .../libpng12-0_1.2.49-4_s390x.deb) ...
-Selecting previously unselected package libxau6:s390x.
-Unpacking libxau6:s390x (from .../libxau6_1%3a1.0.7-1_s390x.deb) ...
-Selecting previously unselected package libxdmcp6:s390x.
-Unpacking libxdmcp6:s390x (from .../libxdmcp6_1%3a1.1.1-1_s390x.deb) ...
-Selecting previously unselected package libxcb1:s390x.
-Unpacking libxcb1:s390x (from .../libxcb1_1.8.1-2_s390x.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:s390x.
-Unpacking libx11-6:s390x (from .../libx11-6_2%3a1.5.0-1_s390x.deb) ...
-Selecting previously unselected package libxcb-render0:s390x.
-Unpacking libxcb-render0:s390x (from .../libxcb-render0_1.8.1-2_s390x.deb) ...
Selecting previously unselected package libxcb-shm0:s390x.
-Unpacking libxcb-shm0:s390x (from .../libxcb-shm0_1.8.1-2_s390x.deb) ...
-Selecting previously unselected package libxext6:s390x.
-Unpacking libxext6:s390x (from .../libxext6_2%3a1.3.1-2_s390x.deb) ...
+Unpacking libxcb-shm0:s390x (from .../libxcb-shm0_1.9.1-3_s390x.deb) ...
Selecting previously unselected package libxrender1:s390x.
-Unpacking libxrender1:s390x (from .../libxrender1_1%3a0.9.7-1_s390x.deb) ...
+Unpacking libxrender1:s390x (from .../libxrender1_1%3a0.9.8-1_s390x.deb) ...
Selecting previously unselected package libcairo2:s390x.
-Unpacking libcairo2:s390x (from .../libcairo2_1.12.14-4_s390x.deb) ...
-Selecting previously unselected package libffi6:s390x.
-Unpacking libffi6:s390x (from .../libffi6_3.0.13-4_s390x.deb) ...
+Unpacking libcairo2:s390x (from .../libcairo2_1.12.14-5_s390x.deb) ...
Selecting previously unselected package libglib2.0-0:s390x.
-Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.36.1-2build1_s390x.deb) ...
+Unpacking libglib2.0-0:s390x (from .../libglib2.0-0_2.36.3-3_s390x.deb) ...
Selecting previously unselected package libcroco3:s390x.
Unpacking libcroco3:s390x (from .../libcroco3_0.6.8-2_s390x.deb) ...
Selecting previously unselected package libdatrie1:s390x.
Unpacking libdatrie1:s390x (from .../libdatrie1_0.2.6-2_s390x.deb) ...
-Selecting previously unselected package libunistring0:s390x.
-Unpacking libunistring0:s390x (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
-Selecting previously unselected package libgettextpo0:s390x.
-Unpacking libgettextpo0:s390x (from .../libgettextpo0_0.18.1.1-10_s390x.deb) ...
-Selecting previously unselected package gcc-4.8-base:s390x.
-Unpacking gcc-4.8-base:s390x (from .../gcc-4.8-base_4.8.0-7_s390x.deb) ...
Selecting previously unselected package libgfortran3:s390x.
-Unpacking libgfortran3:s390x (from .../libgfortran3_4.8.0-7_s390x.deb) ...
+Unpacking libgfortran3:s390x (from .../libgfortran3_4.8.1-8_s390x.deb) ...
+Selecting previously unselected package libgraphite2-3:s390x.
+Unpacking libgraphite2-3:s390x (from .../libgraphite2-3_1.2.3-1_s390x.deb) ...
+Selecting previously unselected package libharfbuzz0a:s390x.
+Unpacking libharfbuzz0a:s390x (from .../libharfbuzz0a_0.9.19-1_s390x.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:s390x.
@@ -421,12 +437,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:s390x.
Unpacking libthai0:s390x (from .../libthai0_0.1.19-2_s390x.deb) ...
-Selecting previously unselected package libxft2:s390x.
-Unpacking libxft2:s390x (from .../libxft2_2.3.1-1_s390x.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_s390x.deb) ...
-Selecting previously unselected package libpango1.0-0:s390x.
-Unpacking libpango1.0-0:s390x (from .../libpango1.0-0_1.30.0-1_s390x.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_s390x.deb) ...
+Selecting previously unselected package libpango-1.0-0:s390x.
+Unpacking libpango-1.0-0:s390x (from .../libpango-1.0-0_1.32.5-5+b1_s390x.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:s390x.
+Unpacking libpangoft2-1.0-0:s390x (from .../libpangoft2-1.0-0_1.32.5-5+b1_s390x.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:s390x.
+Unpacking libpangocairo-1.0-0:s390x (from .../libpangocairo-1.0-0_1.32.5-5+b1_s390x.deb) ...
Selecting previously unselected package libpaper1:s390x.
Unpacking libpaper1:s390x (from .../libpaper1_1.1.24+nmu2_s390x.deb) ...
Selecting previously unselected package libpcrecpp0:s390x.
@@ -436,47 +454,48 @@ Unpacking libsm6:s390x (from .../libsm6_2%3a1.2.1-2_s390x.deb) ...
Selecting previously unselected package libjbig0:s390x.
Unpacking libjbig0:s390x (from .../libjbig0_2.0-2_s390x.deb) ...
Selecting previously unselected package libtiff5:s390x.
-Unpacking libtiff5:s390x (from .../libtiff5_4.0.2-6_s390x.deb) ...
+Unpacking libtiff5:s390x (from .../libtiff5_4.0.3-1_s390x.deb) ...
+Selecting previously unselected package libunistring0:s390x.
+Unpacking libunistring0:s390x (from .../libunistring0_0.9.3-5+b1_s390x.deb) ...
+Selecting previously unselected package libxft2:s390x.
+Unpacking libxft2:s390x (from .../libxft2_2.3.1-1_s390x.deb) ...
Selecting previously unselected package libxss1:s390x.
Unpacking libxss1:s390x (from .../libxss1_1%3a1.2.2-1_s390x.deb) ...
Selecting previously unselected package libxt6:s390x.
-Unpacking libxt6:s390x (from .../libxt6_1%3a1.1.3-1_s390x.deb) ...
-Selecting previously unselected package libmpc3:s390x.
-Unpacking libmpc3:s390x (from .../libmpc3_1.0.1-1_s390x.deb) ...
+Unpacking libxt6:s390x (from .../libxt6_1%3a1.1.3-1+deb7u1_s390x.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_s390x.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_s390x.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_s390x.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_s390x.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Preparing to replace libstdc++6-4.6-dev 4.6.3-15 (using .../libstdc++6-4.6-dev_4.6.4-2_s390x.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
+Preparing to replace libstdc++6-4.6-dev 4.6.4-2 (using .../libstdc++6-4.6-dev_4.6.4-4_s390x.deb) ...
Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.3-15 (using .../g++-4.6_4.6.4-2_s390x.deb) ...
+Preparing to replace g++-4.6 4.6.4-2 (using .../g++-4.6_4.6.4-4_s390x.deb) ...
Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.3-15 (using .../gcc-4.6_4.6.4-2_s390x.deb) ...
+Preparing to replace gcc-4.6 4.6.4-2 (using .../gcc-4.6_4.6.4-4_s390x.deb) ...
Unpacking replacement gcc-4.6 ...
-Preparing to replace cpp-4.6 4.6.3-15 (using .../cpp-4.6_4.6.4-2_s390x.deb) ...
+Preparing to replace cpp-4.6 4.6.4-2 (using .../cpp-4.6_4.6.4-4_s390x.deb) ...
Unpacking replacement cpp-4.6 ...
-Preparing to replace gcc-4.6-base:s390x 4.6.3-15 (using .../gcc-4.6-base_4.6.4-2_s390x.deb) ...
+Preparing to replace gcc-4.6-base:s390x 4.6.4-2 (using .../gcc-4.6-base_4.6.4-4_s390x.deb) ...
Unpacking replacement gcc-4.6-base:s390x ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15+b1_s390x.deb) ...
-Selecting previously unselected package libasprintf-dev:s390x.
-Unpacking libasprintf-dev:s390x (from .../libasprintf-dev_0.18.1.1-10_s390x.deb) ...
-Selecting previously unselected package libgettextpo-dev:s390x.
-Unpacking libgettextpo-dev:s390x (from .../libgettextpo-dev_0.18.1.1-10_s390x.deb) ...
+Preparing to replace cpp 4:4.6.4-1 (using .../cpp_4%3a4.6.4-2_s390x.deb) ...
+Unpacking replacement cpp ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_s390x.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_s390x.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
+Preparing to replace gcc 4:4.6.4-1 (using .../gcc_4%3a4.6.4-2_s390x.deb) ...
+Removing old gcc doc directory.
+Unpacking replacement gcc ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_s390x.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-4_s390x.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_s390x.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.4-2_s390x.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_s390x.deb) ...
Selecting previously unselected package libblas-dev.
@@ -490,9 +509,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_s390x.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_s390x.deb) ...
Selecting previously unselected package libtinfo-dev:s390x.
-Unpacking libtinfo-dev:s390x (from .../libtinfo-dev_5.9+20130504-1_s390x.deb) ...
+Unpacking libtinfo-dev:s390x (from .../libtinfo-dev_5.9+20130608-1_s390x.deb) ...
Selecting previously unselected package libncurses5-dev:s390x.
-Unpacking libncurses5-dev:s390x (from .../libncurses5-dev_5.9+20130504-1_s390x.deb) ...
+Unpacking libncurses5-dev:s390x (from .../libncurses5-dev_5.9+20130608-1_s390x.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_s390x.deb) ...
Selecting previously unselected package libpcre3-dev:s390x.
@@ -512,54 +531,69 @@ Unpacking unzip (from .../archives/unzip_6.0-9_s390x.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_s390x.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_s390x.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_s390x.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_s390x.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1-1_s390x.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_s390x.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1-1_all.deb) ...
-Setting up libc-dev-bin (2.17-3) ...
-Setting up libc6-dev:s390x (2.17-3) ...
-Setting up libpipeline1:s390x (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:s390x (4.8.1-8) ...
+Setting up libpipeline1:s390x (1.2.4-1) ...
+Setting up libudev0:s390x (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
-Setting up man-db (2.6.3-6) ...
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:s390x (0.18.1.1-10) ...
-Setting up libmagic1:s390x (1:5.14-1) ...
-Setting up libpcre3:s390x (1:8.31-2) ...
-Setting up libxml2:s390x (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:s390x (2.1.0-3) ...
+Setting up libasprintf0c2:s390x (0.18.3-1) ...
+Setting up libmagic1:s390x (1:5.14-2) ...
+Setting up libxml2:s390x (2.9.1+dfsg1-2) ...
+Setting up libdrm2:s390x (2.4.45-3) ...
+Setting up libglapi-mesa:s390x (9.1.4-1) ...
+Setting up libxau6:s390x (1:1.0.8-1) ...
+Setting up libxdmcp6:s390x (1:1.1.1-1) ...
+Setting up libxcb1:s390x (1.9.1-3) ...
+Setting up libxcb-dri2-0:s390x (1.9.1-3) ...
+Setting up libgbm1:s390x (9.1.4-1) ...
+Setting up libffi6:s390x (3.0.13-4) ...
+Setting up libwayland-client0:s390x (1.1.0-2) ...
+Setting up libwayland-server0:s390x (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:s390x (2:1.6.0-1) ...
+Setting up libx11-xcb1:s390x (2:1.6.0-1) ...
+Setting up libxcb-render0:s390x (1.9.1-3) ...
+Setting up libxcb-shape0:s390x (1.9.1-3) ...
+Setting up libxcb-xfixes0:s390x (1.9.1-3) ...
+Setting up libegl1-mesa:s390x (9.1.4-1) ...
+Setting up libexpat1:s390x (2.1.0-4) ...
Setting up libfreetype6:s390x (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:s390x (2.9.0-7.1) ...
-Setting up libpixman-1-0:s390x (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:s390x (2.10.2-2) ...
+Setting up libxcb-glx0:s390x (1.9.1-3) ...
+Setting up libxfixes3:s390x (1:5.0.1-1) ...
+Setting up libxdamage1:s390x (1:1.1.4-1) ...
+Setting up libxext6:s390x (2:1.3.2-1) ...
+Setting up libxxf86vm1:s390x (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:s390x (9.1.4-1) ...
+Setting up libpixman-1-0:s390x (0.30.0-3) ...
Setting up libpng12-0:s390x (1.2.49-4) ...
-Setting up libxau6:s390x (1:1.0.7-1) ...
-Setting up libxdmcp6:s390x (1:1.1.1-1) ...
-Setting up libxcb1:s390x (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:s390x (2:1.5.0-1) ...
-Setting up libxcb-render0:s390x (1.8.1-2) ...
-Setting up libxcb-shm0:s390x (1.8.1-2) ...
-Setting up libxext6:s390x (2:1.3.1-2) ...
-Setting up libxrender1:s390x (1:0.9.7-1) ...
-Setting up libcairo2:s390x (1.12.14-4) ...
-Setting up libffi6:s390x (3.0.13-4) ...
-Setting up libglib2.0-0:s390x (2.36.1-2build1) ...
+Setting up libxcb-shm0:s390x (1.9.1-3) ...
+Setting up libxrender1:s390x (1:0.9.8-1) ...
+Setting up libcairo2:s390x (1.12.14-5) ...
+Setting up libglib2.0-0:s390x (2.36.3-3) ...
No schema files found: doing nothing.
Setting up libcroco3:s390x (0.6.8-2) ...
Setting up libdatrie1:s390x (0.2.6-2) ...
-Setting up libunistring0:s390x (0.9.3-5+b1) ...
-Setting up libgettextpo0:s390x (0.18.1.1-10) ...
-Setting up gcc-4.8-base:s390x (4.8.0-7) ...
-Setting up libgfortran3:s390x (4.8.0-7) ...
+Setting up libgfortran3:s390x (4.8.1-8) ...
+Setting up libgraphite2-3:s390x (1.2.3-1) ...
+Setting up libharfbuzz0a:s390x (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
@@ -567,35 +601,36 @@ Setting up libice6:s390x (2:1.0.8-2) ...
Setting up libjpeg8:s390x (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:s390x (0.1.19-2) ...
-Setting up libxft2:s390x (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:s390x (1.30.0-1) ...
+Setting up libpango-1.0-0:s390x (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:s390x (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:s390x (1.32.5-5+b1) ...
Setting up libpaper1:s390x (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:s390x (1:8.31-2) ...
Setting up libsm6:s390x (2:1.2.1-2) ...
Setting up libjbig0:s390x (2.0-2) ...
-Setting up libtiff5:s390x (4.0.2-6) ...
+Setting up libtiff5:s390x (4.0.3-1) ...
+Setting up libunistring0:s390x (0.9.3-5+b1) ...
+Setting up libxft2:s390x (2.3.1-1) ...
Setting up libxss1:s390x (1:1.2.2-1) ...
-Setting up libxt6:s390x (1:1.1.3-1) ...
-Setting up libmpc3:s390x (1.0.1-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up gcc-4.6-base:s390x (4.6.4-2) ...
-Setting up cpp-4.6 (4.6.4-2) ...
-Setting up gcc-4.6 (4.6.4-2) ...
-Setting up html2text (1.3.2a-15+b1) ...
-Setting up libasprintf-dev:s390x (0.18.1.1-10) ...
-Setting up libgettextpo-dev:s390x (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:s390x (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gcc-4.6-base:s390x (4.6.4-4) ...
+Setting up cpp-4.6 (4.6.4-4) ...
+Setting up gcc-4.6 (4.6.4-4) ...
+Setting up cpp (4:4.6.4-2) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up gcc (4:4.6.4-2) ...
+Setting up gfortran-4.6 (4.6.4-4) ...
+Setting up gfortran (4:4.6.4-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -607,8 +642,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:s390x (5.9+20130504-1) ...
-Setting up libncurses5-dev:s390x (5.9+20130504-1) ...
+Setting up libtinfo-dev:s390x (5.9+20130608-1) ...
+Setting up libncurses5-dev:s390x (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:s390x (1:8.31-2) ...
Setting up zlib1g-dev:s390x (1:1.2.8.dfsg-1) ...
@@ -618,25 +653,26 @@ Setting up libreadline-dev:s390x (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1-1) ...
-Setting up g++-4.6 (4.6.4-2) ...
-Setting up libstdc++6-4.6-dev (4.6.4-2) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 26 not upgraded.
-Checking correctness of dependencies...
-Kernel: Linux 2.6.32-5-s390x s390x (s390x)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6-dev_2.17-3 libstdc++6_4.7.2-5 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.2.41-2
-Package versions: apt_0.9.7.8+b1 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.20-3 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 debconf_1.5.49 debconf-i18n_1.5.49 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1:5.14-1 f [...]
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
+Setting up g++-4.6 (4.6.4-4) ...
+Setting up libstdc++6-4.6-dev (4.6.4-4) ...
+Processing triggers for libc-bin ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Kernel: Linux 2.6.32-5-s390x s390 (s390x)
+Toolchain package versions: binutils_2.23.52.20130612-1 dpkg-dev_1.16.10 g++-4.6_4.6.4-4 gcc-4.6_4.6.4-4 libc6-dev_2.17-5 libstdc++6_4.8.1-8 libstdc++6-4.6-dev_4.6.4-4 linux-libc-dev_3.9.5-1
+Package versions: apt_0.9.8.2 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130612-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.4 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.20-3 cpp_4:4.6.4-2 cpp-4.6_4.6.4-4 dash_0.5.7-3 debconf_1.5.50 debconf-i18n_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.19-2 file_1:5 [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -646,28 +682,48 @@ Package versions: apt_0.9.7.8+b1 base-files_7.1 base-passwd_3.5.26 bash_4.2+dfsg
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+DEB_BUILD_OPTIONS=parallel=2
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-s390x-sbuild
+SCHROOT_CHROOT_NAME=sid-s390x-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-s390x-sbuild-003ba854-519c-476f-8b9a-5d8e47453ccb
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+TERM=xterm
+USER=buildd
+USERNAME=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture s390x
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -683,7 +739,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -702,26 +758,26 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -731,13 +787,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -745,7 +801,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -781,9 +837,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- gzip -9nf usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -813,79 +869,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_s390x.deb'.
- dpkg-genchanges -B -ms390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_s390x.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_s390x.deb'.
+ dpkg-genchanges -B -ms390/s390x Build Daemon (zemlinsky) <buildd_s390x-zemlinsky at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_s390x.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130517-1414
+Build finished at 20130804-0936
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_s390x.changes:
+─────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_s390x.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: s390x
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: s390/s390x Build Daemon (zandonai) <buildd_s390-zandonai at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: s390/s390x Build Daemon (zemlinsky) <buildd_s390x-zemlinsky at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
- .
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- 7cca32fa82c32154b9646b83f2c90c3707b99ae6 1617786 r-bioc-limma_3.16.3~dfsg-1_s390x.deb
+ 0ba2de265856cf81fd8bbdb5d76316c661198d36 863394 r-bioc-limma_3.16.7~dfsg-1_s390x.deb
Checksums-Sha256:
- 51760bf4b700252d1a209110a5e1c788b419f0b9375e1e6caca037160d56a7fe 1617786 r-bioc-limma_3.16.3~dfsg-1_s390x.deb
+ c6f43e532c4b5e6dfac1a16e79a39406400764b1814470dc4f83da40adf35ee9 863394 r-bioc-limma_3.16.7~dfsg-1_s390x.deb
Files:
- 4f33d1f52ae5d9b7fb9a35af20abcdd1 1617786 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_s390x.deb
+ afafd999773c826a89678cdf1425d708 863394 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_s390x.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_s390x.deb
+r-bioc-limma_3.16.7~dfsg-1_s390x.deb
────────────────────────────────────
new debian package, version 2.0.
- size 1617786 bytes: control archive= 1667 bytes.
+ size 863394 bytes: control archive=1632 bytes.
773 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: s390x
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1847
- Depends: libc6 (>= 2.2), r-base-core (>= 3.0.1-1)
+ Installed-Size: 1060
+ Depends: libc6 (>= 2.2), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -897,89 +950,91 @@ r-bioc-limma_3.16.3~dfsg-1_s390x.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 10085 2013-05-17 14:14 ./usr/lib/R/site-library/limma/INDEX
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 1056 2013-05-17 14:14 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 206552 2013-05-17 14:14 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 4120 2013-05-17 14:14 ./usr/lib/R/site-library/limma/R/limma.rdx
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2013-05-17 14:14 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 37337 2013-05-17 14:14 ./usr/lib/R/site-library/limma/html/00Index.html
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 10632 2013-05-17 14:14 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1398 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 494828 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 3414 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 2567 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 6703 2013-05-17 14:14 ./usr/lib/R/site-library/limma/help/AnIndex
--rw-r--r-- root/root 2046 2013-05-17 14:14 ./usr/lib/R/site-library/limma/NAMESPACE
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 1711 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 673 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 806089 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
--rw-r--r-- root/root 45597 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 102936 2013-05-17 14:14 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 987 2013-05-17 14:14 ./usr/lib/R/site-library/limma/DESCRIPTION
--rw-r--r-- root/root 11214 2013-05-17 14:14 ./usr/lib/R/site-library/limma/NEWS.Rd
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 541 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 219 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 5944 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 3089 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 1063 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/package.rds
--rw-r--r-- root/root 6375 2013-05-17 14:14 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 963 2013-05-17 14:14 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/share/doc/r-bioc-limma/
-drwxr-xr-x root/root 0 2013-05-17 14:14 ./usr/share/doc/r-bioc-limma/tests/
--rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
+-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 1711 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 45597 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/limma.pdf
+-rw-r--r-- root/root 104280 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 673 2013-08-04 09:36 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 10085 2013-08-04 09:36 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 10552 2013-08-04 09:36 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 11214 2013-08-04 09:36 ./usr/lib/R/site-library/limma/NEWS.Rd
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 207868 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 1056 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 4122 2013-08-04 09:36 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 987 2013-08-04 09:36 ./usr/lib/R/site-library/limma/DESCRIPTION
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 1392 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 6742 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 492365 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 2577 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/aliases.rds
+-rw-r--r-- root/root 3430 2013-08-04 09:36 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 2095 2013-08-04 09:36 ./usr/lib/R/site-library/limma/NAMESPACE
+-rw-r--r-- root/root 963 2013-08-04 09:36 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 1069 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/package.rds
+-rw-r--r-- root/root 5952 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 3098 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 219 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 6386 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 542 2013-08-04 09:36 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+drwxr-xr-x root/root 0 2013-08-04 09:36 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 37564 2013-08-04 09:36 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 1179 2013-08-04 09:36 ./usr/lib/R/site-library/limma/html/R.css
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-s390x-sbuild-05de5256-6c26-4dd9-b80b-c80fe40f1f51/sid-s390x-sbuild/build/buildd-r-bioc-limma_3.16.3~dfsg-1-s390x-grlQTx
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: s390x
-Build-Space: 5884
-Build-Time: 9
+Build Architecture: s390x
+Build-Space: 3544
+Build-Time: 16
Distribution: sid
-Install-Time: 44
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: s390x
+Install-Time: 26
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: s390
Package: r-bioc-limma
-Package-Time: 87
-Source-Version: 3.16.3~dfsg-1
-Space: 5884
+Package-Time: 59
+Source-Version: 3.16.7~dfsg-1
+Space: 3544
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130517-1414
-Build needed 00:01:27, 5884k disc space
-Signature with key '06DAB0BE' requested:
+Finished at 20130804-0936
+Build needed 00:00:59, 3544k disc space
+Signature with key '52DC96B8' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_s390x.changes 52DC96B8
+
+Successfully signed changes file
diff --git a/sparc.log b/sparc.log
index e2c059b..085a4a3 100644
--- a/sparc.log
+++ b/sparc.log
@@ -1,64 +1,76 @@
-From buildd at lebrun.debian.org Thu May 16 23:52:09 2013
-Return-path: <buildd at lebrun.debian.org>
-Received: from merikanto.debian.org ([2001:858:2:2:216:35ff:fec4:a49a])
+From buildd at schroeder.debian.org Sun Aug 04 11:30:12 2013
+Return-path: <buildd at schroeder.debian.org>
+Received: from mailly.debian.org ([2001:41b8:202:deb:6564:a62:52c3:4b72])
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=merikanto.debian.org,
- EMAIL=hostmaster at merikanto.debian.org (verified)
- by grieg.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at lebrun.debian.org>)
- id 1Ud7xx-0001oT-4q
- for logs at buildd.debian.org; Thu, 16 May 2013 23:52:09 +0000
-Received: from [2001:b68:ff:5:203:baff:fe59:abad] (helo=lebrun.debian.org)
+ CN=mailly.debian.org, EMAIL=hostmaster at mailly.debian.org (verified)
+ by grieg.debian.org with esmtps (TLS1.0:DHE_RSA_AES_128_CBC_SHA1:16)
+ (Exim 4.72) (envelope-from <buildd at schroeder.debian.org>)
+ id 1V5wVo-0006ph-Ai
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 11:30:12 +0000
+Received: from [2001:b68:ff:5:203:baff:fe5a:53a5] (helo=schroeder.debian.org)
from C=NA, ST=NA, L=Ankh Morpork, O=Debian SMTP, OU=Debian SMTP CA,
- CN=lebrun.debian.org, EMAIL=hostmaster at lebrun.debian.org (verified)
- by merikanto.debian.org with esmtps (TLS1.0:RSA_AES_256_CBC_SHA1:32)
- (Exim 4.72) (envelope-from <buildd at lebrun.debian.org>)
- id 1Ud7xw-0001MO-9H
- for logs at buildd.debian.org; Thu, 16 May 2013 23:52:08 +0000
-Received: from buildd by lebrun.debian.org with local (Exim 4.72)
- (envelope-from <buildd at lebrun.debian.org>)
- id 1Ud7xu-0001f1-IQ; Thu, 16 May 2013 23:52:06 +0000
-Message-Id: <E1Ud7xu-0001f1-IQ at lebrun.debian.org>
-MIME-Version: 1.0
+ CN=schroeder.debian.org,
+ EMAIL=hostmaster at schroeder.debian.org (verified)
+ by mailly.debian.org with esmtps (TLS1.2:DHE_RSA_AES_128_CBC_SHA1:128)
+ (Exim 4.80) (envelope-from <buildd at schroeder.debian.org>)
+ id 1V5wVn-00048e-1b
+ for logs at buildd.debian.org; Sun, 04 Aug 2013 11:30:11 +0000
+Received: from buildd by schroeder.debian.org with local (Exim 4.80)
+ (envelope-from <buildd at schroeder.debian.org>)
+ id 1V5wVb-0003Q4-Cb; Sun, 04 Aug 2013 11:29:59 +0000
Content-Transfer-Encoding: binary
-X-Mailer: MIME::Lite 3.027 (F2.77; B3.08; Q3.08)
-Date: Thu, 16 May 2013 23:52:06 +0000
-From: buildd on lebrun <buildd at lebrun.debian.org>
-To: logs at buildd.debian.org,buildd-admin at lebrun.debian.org
-Subject: Log for successful build of r-bioc-limma_3.16.3~dfsg-1 on sparc
+MIME-Version: 1.0
+X-Mailer: MIME::Lite 3.028 (F2.82; B3.13; Q3.13)
+Date: Sun, 4 Aug 2013 11:29:59 +0000
+From: buildd on schroeder <buildd at schroeder.debian.org>
+To: buildd-admin at schroeder.debian.org,logs at buildd.debian.org
+Subject: Log for successful build of r-bioc-limma_3.16.7~dfsg-1 on sparc
(dist=sid)
-Key-Id: B16CDE7F
+Key-Id: B3666332
+Message-Id: <E1V5wVb-0003Q4-Cb at schroeder.debian.org>
Delivered-To: logs at buildd.debian.org
-sbuild (Debian sbuild) 0.61.0 (23 Feb 2011) on lebrun.debian.org
+sbuild (Debian sbuild) 0.64.0 (17 May 2013) on schroeder.debian.org
╔══════════════════════════════════════════════════════════════════════════════╗
-║ r-bioc-limma 3.16.3~dfsg-1 (sparc) 16 May 2013 23:45 ║
+║ r-bioc-limma 3.16.7~dfsg-1 (sparc) 04 Aug 2013 11:25 ║
╚══════════════════════════════════════════════════════════════════════════════╝
Package: r-bioc-limma
-Version: 3.16.3~dfsg-1
-Source Version: 3.16.3~dfsg-1
-Architecture: sparc
-Get:1 http://debian.carnet.hr unstable InRelease [205 kB]
-Get:2 http://incoming.debian.org unstable InRelease [205 kB]
-Get:3 http://debian.carnet.hr unstable/main Sources [6731 kB]
+Version: 3.16.7~dfsg-1
+Source Version: 3.16.7~dfsg-1
+Distribution: sid
+Machine Architecture: sparc
+Host Architecture: sparc
+Build Architecture: sparc
+
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-MhiLeU/r-bioc-limma-3.16.7~dfsg' with '«PKGBUILDDIR»'
+I: NOTICE: Log filtering will replace 'build/r-bioc-limma-MhiLeU' with '«BUILDDIR»'
+I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/sid-sparc-sbuild-c5c72772-8c5a-466f-94da-40fa81a065a6' with '«CHROOT»'
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Update chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+Get:1 http://ftp.hr.debian.org unstable InRelease [204 kB]
+Get:2 http://ftp.hr.debian.org unstable/main Sources [6890 kB]
+Get:3 http://incoming.debian.org unstable InRelease [204 kB]
Get:4 http://incoming.debian.org buildd-unstable InRelease [111 kB]
-Get:5 http://incoming.debian.org unstable/main Sources [6731 kB]
-Get:6 http://debian.carnet.hr unstable/contrib Sources [53.7 kB]
-Get:7 http://debian.carnet.hr unstable/non-free Sources [103 kB]
-Get:8 http://debian.carnet.hr unstable/main sparc Packages [6230 kB]
-Get:9 http://debian.carnet.hr unstable/contrib sparc Packages [37.0 kB]
-Get:10 http://incoming.debian.org unstable/contrib Sources [53.7 kB]
-Get:11 http://incoming.debian.org unstable/non-free Sources [103 kB]
-Get:12 http://incoming.debian.org unstable/main sparc Packages [6230 kB]
-Get:13 http://incoming.debian.org unstable/contrib sparc Packages [37.0 kB]
-Get:14 http://incoming.debian.org buildd-unstable/main Sources [120 kB]
-Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [1919 B]
-Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2390 B]
-Get:17 http://incoming.debian.org buildd-unstable/main sparc Packages [91.4 kB]
+Get:5 http://incoming.debian.org unstable/main Sources [6890 kB]
+Get:6 http://ftp.hr.debian.org unstable/contrib Sources [55.4 kB]
+Get:7 http://ftp.hr.debian.org unstable/non-free Sources [105 kB]
+Get:8 http://ftp.hr.debian.org unstable/main sparc Packages [6297 kB]
+Get:9 http://ftp.hr.debian.org unstable/contrib sparc Packages [37.5 kB]
+Get:10 http://incoming.debian.org unstable/contrib Sources [55.4 kB]
+Get:11 http://incoming.debian.org unstable/non-free Sources [105 kB]
+Get:12 http://incoming.debian.org unstable/main sparc Packages [6297 kB]
+Get:13 http://incoming.debian.org unstable/contrib sparc Packages [37.5 kB]
+Get:14 http://incoming.debian.org buildd-unstable/main Sources [96.1 kB]
+Get:15 http://incoming.debian.org buildd-unstable/contrib Sources [750 B]
+Get:16 http://incoming.debian.org buildd-unstable/non-free Sources [2795 B]
+Get:17 http://incoming.debian.org buildd-unstable/main sparc Packages [68.3 kB]
Get:18 http://incoming.debian.org buildd-unstable/contrib sparc Packages [14 B]
-Fetched 27.0 MB in 1min 3s (429 kB/s)
+Fetched 27.5 MB in 1min 4s (427 kB/s)
Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
@@ -78,358 +90,328 @@ Reading package lists...
Building dependency tree...
Reading state information...
NOTICE: 'r-bioc-limma' packaging is maintained in the 'Git' version control system at:
-git://git.debian.org/git/debian-med/r-bioc-limma.git
-Need to get 1058 kB of source archives.
-Get:1 http://debian.carnet.hr/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (dsc) [1409 B]
-Get:2 http://debian.carnet.hr/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (tar) [1052 kB]
-Get:3 http://debian.carnet.hr/debian/ unstable/main r-bioc-limma 3.16.3~dfsg-1 (diff) [4167 B]
-Fetched 1058 kB in 0s (1251 kB/s)
+git://anonscm.debian.org/debian-med/r-bioc-limma.git
+Need to get 316 kB of source archives.
+Get:1 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (dsc) [2080 B]
+Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (tar) [310 kB]
+Get:3 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-bioc-limma 3.16.7~dfsg-1 (diff) [4179 B]
+Fetched 316 kB in 1s (188 kB/s)
Download complete and in download only mode
Check arch
──────────
+Merged Build-Depends: build-essential, fakeroot
+Filtered Build-Depends: build-essential, fakeroot
+dpkg-deb: building package `sbuild-build-depends-core-dummy' in `/«BUILDDIR»/resolver-2tRlb4/apt_archive/sbuild-build-depends-core-dummy.deb'.
+OK
+Reading package lists...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install core build dependencies (internal resolver) │
+│ Install core build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: build-essential, fakeroot
-Checking for already installed dependencies...
-build-essential: already installed (11.6)
-fakeroot: already installed (1.18.4-2)
-Checking for dependency conflicts...
-Installing positive dependencies:
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 33 not upgraded.
-Removing negative dependencies:
+The following NEW packages will be installed:
+ sbuild-build-depends-core-dummy
+debconf: delaying package configuration, since apt-utils is not installed
+0 upgraded, 1 newly installed, 0 to remove and 26 not upgraded.
+Need to get 0 B/710 B of archives.
+After this operation, 0 B of additional disk space will be used.
+Selecting previously unselected package sbuild-build-depends-core-dummy.
+(Reading database ... 11276 files and directories currently installed.)
+Unpacking sbuild-build-depends-core-dummy (from .../sbuild-build-depends-core-dummy.deb) ...
+Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
+Merged Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, libc6-dev-sparc64, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+Filtered Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev, libc6-dev-sparc64, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
+dpkg-deb: building package `sbuild-build-depends-r-bioc-limma-dummy' in `/«BUILDDIR»/resolver-lmpRm9/apt_archive/sbuild-build-depends-r-bioc-limma-dummy.deb'.
+OK
Reading package lists...
-Building dependency tree...
-Reading state information...
-0 upgraded, 0 newly installed, 0 to remove and 33 not upgraded.
-Checking correctness of dependencies...
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Install r-bioc-limma build dependencies (internal resolver) │
+│ Install r-bioc-limma build dependencies (apt-based resolver) │
└──────────────────────────────────────────────────────────────────────────────┘
-Build-Depends: base-files, base-passwd, bash, bsdutils, coreutils, dash, debianutils, diffutils, dpkg, e2fsprogs, findutils, grep, gzip, hostname, libc-bin, login, mount, ncurses-base, ncurses-bin, perl-base, sed, sysvinit, sysvinit-utils, tar, util-linux, libc6-dev | libc-dev, libc6-dev-sparc64, gcc (>= 4:4.4.3), g++ (>= 4:4.4.3), make, dpkg-dev (>= 1.13.5), debhelper (>= 9), cdbs, r-base-dev
-Checking for already installed dependencies...
-base-files: already installed (7.2)
-base-passwd: already installed (3.5.26)
-bash: already installed (4.2+dfsg-1)
-bsdutils: already installed (1:2.20.1-5.3)
-coreutils: already installed (8.13-3.3)
-dash: already installed (0.5.7-3)
-debianutils: already installed (4.3.4)
-diffutils: already installed (1:3.2-8)
-dpkg: already installed (1.16.10)
-e2fsprogs: already installed (1.42.5-1.1)
-findutils: already installed (4.4.2-5)
-grep: already installed (2.14-1)
-gzip: already installed (1.5-1.1)
-hostname: already installed (3.12)
-libc-bin: already installed (2.13-38)
-login: already installed (1:4.1.5.1-1)
-mount: already installed (2.20.1-5.3)
-ncurses-base: already installed (5.9-10)
-ncurses-bin: already installed (5.9-10)
-perl-base: already installed (5.14.2-21)
-sed: already installed (4.2.2-1)
-sysvinit: already installed (2.88dsf-41)
-sysvinit-utils: already installed (2.88dsf-41)
-tar: already installed (1.26+dfsg-5)
-util-linux: already installed (2.20.1-5.3)
-libc6-dev: already installed (2.13-38)
-libc6-dev-sparc64: already installed (2.13-38)
-gcc: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-g++: already installed (4:4.6.3-8 >= 4:4.4.3 is satisfied)
-make: already installed (3.81-8.2)
-dpkg-dev: already installed (1.16.10 >= 1.13.5 is satisfied)
-debhelper: missing
-Using default version 9.20130516
-cdbs: missing
-r-base-dev: missing
-Checking for dependency conflicts...
-Installing positive dependencies: debhelper cdbs r-base-dev
+Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
-The following package was automatically installed and is no longer required:
- libmpc2
-Use 'apt-get autoremove' to remove it.
The following extra packages will be installed:
- bsdmainutils cpp-4.6 file fontconfig fontconfig-config fonts-dejavu-core
- g++-4.6 gcc-4.6 gcc-4.6-base gcc-4.8-base gettext gettext-base gfortran
- gfortran-4.6 groff-base html2text intltool-debian libasprintf-dev
- libasprintf0c2 libblas-dev libblas3 libbz2-dev libc-dev-bin libc6 libc6-dev
- libc6-dev-sparc64 libc6-sparc64 libcairo2 libcroco3 libdatrie1 libexpat1
- libffi6 libfontconfig1 libfreetype6 libgcc1 libgettextpo-dev libgettextpo0
- libgfortran3 libglib2.0-0 libgomp1 libice6 libjbig0 libjpeg8 libjpeg8-dev
- liblapack-dev liblapack3 libmagic1 libmpc3 libncurses5 libncurses5-dev
- libpango1.0-0 libpaper-utils libpaper1 libpcre3 libpcre3-dev libpcrecpp0
- libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev libreadline-dev
- libreadline6-dev libsm6 libstdc++6 libstdc++6-4.6-dev libthai-data libthai0
- libtiff5 libtinfo-dev libtinfo5 libunistring0 libx11-6 libx11-data libxau6
- libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
- libxrender1 libxss1 libxt6 man-db ncurses-bin po-debconf r-base-core tcl8.5
- tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
+ bsdmainutils cdbs debhelper file fontconfig fontconfig-config
+ fonts-dejavu-core gcc-4.8-base gettext gettext-base gfortran gfortran-4.6
+ groff-base intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev
+ libcairo2 libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6
+ libfontconfig1 libfreetype6 libgbm1 libgcc1 libgfortran3 libgl1-mesa-glx
+ libglapi-mesa libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0a libice6
+ libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3 libmagic1
+ libncurses5-dev libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
+ libpaper-utils libpaper1 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0
+ libpng12-0 libpng12-dev libreadline-dev libreadline6-dev libsm6 libstdc++6
+ libthai-data libthai0 libtiff5 libtinfo-dev libudev0 libunistring0
+ libwayland-client0 libwayland-server0 libx11-6 libx11-data libx11-xcb1
+ libxau6 libxcb-dri2-0 libxcb-glx0 libxcb-render0 libxcb-shape0 libxcb-shm0
+ libxcb-xfixes0 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxft2
+ libxml2 libxrender1 libxss1 libxt6 libxxf86vm1 man-db po-debconf r-base-core
+ r-base-dev tcl8.5 tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip
+ zlib1g-dev
Suggested packages:
- wamerican wordlist whois vacation devscripts gcc-4.6-locales dh-make
- g++-4.6-multilib gcc-4.6-doc libstdc++6-4.6-dbg gcc-4.6-multilib
- libmudflap0-4.6-dev libgcc1-dbg libgomp1-dbg libquadmath-dbg libmudflap0-dbg
- libcloog-ppl1 libcloog-ppl0 libppl-c4 libppl12 libppl9 binutils-gold
- gettext-doc gfortran-multilib gfortran-doc gfortran-4.6-multilib
- gfortran-4.6-doc libgfortran3-dbg groff glibc-doc ncurses-doc ttf-baekmuk
- ttf-arphic-gbsn00lp ttf-arphic-bsmi00lp ttf-arphic-gkai00mp
- ttf-arphic-bkai00mp libstdc++6-4.6-doc less www-browser libmail-box-perl
- r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
- texlive-generic-recommended texlive-fonts-recommended texlive-fonts-extra
- texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
- texi2html tcl-tclreadline gvfs-bin
+ wamerican wordlist whois vacation devscripts dh-make gettext-doc
+ gfortran-multilib gfortran-doc gfortran-4.6-multilib gfortran-4.6-doc
+ libgfortran3-dbg groff ncurses-doc ttf-baekmuk ttf-arphic-gbsn00lp
+ ttf-arphic-bsmi00lp ttf-arphic-gkai00mp ttf-arphic-bkai00mp less www-browser
+ libmail-box-perl r-doc-info r-doc-pdf r-mathlib r-base-html texlive-base
+ texlive-latex-base texlive-generic-recommended texlive-fonts-recommended
+ texlive-fonts-extra texlive-extra-utils texlive-latex-recommended
+ texlive-latex-extra texinfo texi2html tcl-tclreadline gvfs-bin
Recommended packages:
- autotools-dev curl wget lynx-cur autopoint manpages-dev gcc-multilib
- libglib2.0-data shared-mime-info libgpm2 xml-core libmail-sendmail-perl
- r-recommended r-doc-html xterm x-terminal-emulator libfile-mimeinfo-perl
- libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
+ autotools-dev curl wget lynx-cur autopoint libasprintf-dev libgettextpo-dev
+ libegl1-mesa-drivers libgl1-mesa-dri libglib2.0-data shared-mime-info
+ xml-core libmail-sendmail-perl r-recommended r-doc-html xterm
+ x-terminal-emulator libfile-mimeinfo-perl libnet-dbus-perl
+ libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
bsdmainutils cdbs debhelper file fontconfig fontconfig-config
fonts-dejavu-core gettext gettext-base gfortran gfortran-4.6 groff-base
- html2text intltool-debian libasprintf-dev libasprintf0c2 libblas-dev
- libblas3 libbz2-dev libcairo2 libcroco3 libdatrie1 libexpat1 libffi6
- libfontconfig1 libfreetype6 libgettextpo-dev libgettextpo0 libgfortran3
- libglib2.0-0 libice6 libjbig0 libjpeg8 libjpeg8-dev liblapack-dev liblapack3
- libmagic1 libmpc3 libncurses5-dev libpango1.0-0 libpaper-utils libpaper1
- libpcre3 libpcre3-dev libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0
- libpng12-dev libreadline-dev libreadline6-dev libsm6 libthai-data libthai0
- libtiff5 libtinfo-dev libunistring0 libx11-6 libx11-data libxau6
- libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2
- libxrender1 libxss1 libxt6 man-db po-debconf r-base-core r-base-dev tcl8.5
- tk8.5 ttf-dejavu-core ucf unzip x11-common xdg-utils zip zlib1g-dev
+ intltool-debian libasprintf0c2 libblas-dev libblas3 libbz2-dev libcairo2
+ libcroco3 libdatrie1 libdrm2 libegl1-mesa libexpat1 libffi6 libfontconfig1
+ libfreetype6 libgbm1 libgfortran3 libgl1-mesa-glx libglapi-mesa libglib2.0-0
+ libgraphite2-3 libharfbuzz0a libice6 libjbig0 libjpeg8 libjpeg8-dev
+ liblapack-dev liblapack3 libmagic1 libncurses5-dev libpango-1.0-0
+ libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre3-dev
+ libpcrecpp0 libpipeline1 libpixman-1-0 libpng12-0 libpng12-dev
+ libreadline-dev libreadline6-dev libsm6 libthai-data libthai0 libtiff5
+ libtinfo-dev libudev0 libunistring0 libwayland-client0 libwayland-server0
+ libx11-6 libx11-data libx11-xcb1 libxau6 libxcb-dri2-0 libxcb-glx0
+ libxcb-render0 libxcb-shape0 libxcb-shm0 libxcb-xfixes0 libxcb1 libxdamage1
+ libxdmcp6 libxext6 libxfixes3 libxft2 libxml2 libxrender1 libxss1 libxt6
+ libxxf86vm1 man-db po-debconf r-base-core r-base-dev
+ sbuild-build-depends-r-bioc-limma-dummy tcl8.5 tk8.5 ttf-dejavu-core ucf
+ unzip x11-common xdg-utils zip zlib1g-dev
The following packages will be upgraded:
- cpp-4.6 g++-4.6 gcc-4.6 gcc-4.6-base gcc-4.8-base libc-dev-bin libc6
- libc6-dev libc6-dev-sparc64 libc6-sparc64 libgcc1 libgomp1 libncurses5
- libstdc++6 libstdc++6-4.6-dev libtinfo5 ncurses-bin
-17 upgraded, 83 newly installed, 0 to remove and 16 not upgraded.
-Need to get 87.1 MB of archives.
-After this operation, 116 MB of additional disk space will be used.
-Get:1 http://debian.carnet.hr/debian/ unstable/main libc6-dev-sparc64 sparc 2.17-2 [2773 kB]
-Get:2 http://incoming.debian.org/debian-buildd/ buildd-unstable/main debhelper all 9.20130516 [708 kB]
-Get:3 http://debian.carnet.hr/debian/ unstable/main libc6-dev sparc 2.17-2 [3042 kB]
-Get:4 http://debian.carnet.hr/debian/ unstable/main libc-dev-bin sparc 2.17-2 [228 kB]
-Get:5 http://debian.carnet.hr/debian/ unstable/main libc6-sparc64 sparc 2.17-2 [4801 kB]
-Get:6 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-base-core sparc 3.0.1-1 [21.4 MB]
-Get:7 http://debian.carnet.hr/debian/ unstable/main libgomp1 sparc 4.8.0-7 [23.1 kB]
-Get:8 http://debian.carnet.hr/debian/ unstable/main gcc-4.8-base sparc 4.8.0-7 [149 kB]
-Get:9 http://debian.carnet.hr/debian/ unstable/main libgcc1 sparc 1:4.8.0-7 [31.1 kB]
-Get:10 http://debian.carnet.hr/debian/ unstable/main libc6 sparc 2.17-2 [4499 kB]
-Get:11 http://debian.carnet.hr/debian/ unstable/main libstdc++6 sparc 4.8.0-7 [344 kB]
-Get:12 http://debian.carnet.hr/debian/ unstable/main libtinfo5 sparc 5.9+20130504-1 [287 kB]
-Get:13 http://debian.carnet.hr/debian/ unstable/main libncurses5 sparc 5.9+20130504-1 [95.8 kB]
-Get:14 http://debian.carnet.hr/debian/ unstable/main ncurses-bin sparc 5.9+20130504-1 [359 kB]
-Get:15 http://debian.carnet.hr/debian/ unstable/main libpipeline1 sparc 1.2.3-1 [36.9 kB]
-Get:16 http://debian.carnet.hr/debian/ unstable/main groff-base sparc 1.22.2-2 [693 kB]
-Get:17 http://debian.carnet.hr/debian/ unstable/main bsdmainutils sparc 9.0.5 [204 kB]
-Get:18 http://debian.carnet.hr/debian/ unstable/main man-db sparc 2.6.3-6 [865 kB]
-Get:19 http://debian.carnet.hr/debian/ unstable/main libasprintf0c2 sparc 0.18.1.1-10 [26.9 kB]
-Get:20 http://debian.carnet.hr/debian/ unstable/main libmagic1 sparc 1:5.14-1 [212 kB]
-Get:21 http://debian.carnet.hr/debian/ unstable/main libpcre3 sparc 1:8.31-2 [252 kB]
-Get:22 http://debian.carnet.hr/debian/ unstable/main libxml2 sparc 2.8.0+dfsg1-7+nmu1 [826 kB]
-Get:23 http://debian.carnet.hr/debian/ unstable/main libexpat1 sparc 2.1.0-3 [131 kB]
-Get:24 http://debian.carnet.hr/debian/ unstable/main libfreetype6 sparc 2.4.9-1.1 [409 kB]
-Get:25 http://debian.carnet.hr/debian/ unstable/main ucf all 3.0025+nmu3 [70.8 kB]
-Get:26 http://debian.carnet.hr/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
-Get:27 http://debian.carnet.hr/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
-Get:28 http://debian.carnet.hr/debian/ unstable/main fontconfig-config all 2.9.0-7.1 [233 kB]
-Get:29 http://debian.carnet.hr/debian/ unstable/main libfontconfig1 sparc 2.9.0-7.1 [290 kB]
-Get:30 http://debian.carnet.hr/debian/ unstable/main libpixman-1-0 sparc 0.26.0-4 [393 kB]
-Get:31 http://debian.carnet.hr/debian/ unstable/main libpng12-0 sparc 1.2.49-4 [181 kB]
-Get:32 http://debian.carnet.hr/debian/ unstable/main libxau6 sparc 1:1.0.7-1 [17.6 kB]
-Get:33 http://debian.carnet.hr/debian/ unstable/main libxdmcp6 sparc 1:1.1.1-1 [25.1 kB]
-Get:34 http://incoming.debian.org/debian-buildd/ buildd-unstable/main r-base-dev all 3.0.1-1 [3896 B]
-Get:35 http://debian.carnet.hr/debian/ unstable/main libxcb1 sparc 1.8.1-2 [39.9 kB]
-Get:36 http://debian.carnet.hr/debian/ unstable/main libx11-data all 2:1.5.0-1 [189 kB]
-Get:37 http://debian.carnet.hr/debian/ unstable/main libx11-6 sparc 2:1.5.0-1 [841 kB]
-Get:38 http://debian.carnet.hr/debian/ unstable/main libxcb-render0 sparc 1.8.1-2 [15.8 kB]
-Get:39 http://debian.carnet.hr/debian/ unstable/main libxcb-shm0 sparc 1.8.1-2 [9894 B]
-Get:40 http://debian.carnet.hr/debian/ unstable/main libxext6 sparc 2:1.3.1-2 [48.2 kB]
-Get:41 http://debian.carnet.hr/debian/ unstable/main libxrender1 sparc 1:0.9.7-1 [29.2 kB]
-Get:42 http://debian.carnet.hr/debian/ unstable/main libcairo2 sparc 1.12.14-4 [959 kB]
-Get:43 http://debian.carnet.hr/debian/ unstable/main libffi6 sparc 3.0.13-4 [19.7 kB]
-Get:44 http://debian.carnet.hr/debian/ unstable/main libglib2.0-0 sparc 2.36.1-2build1 [1849 kB]
-Get:45 http://debian.carnet.hr/debian/ unstable/main libcroco3 sparc 0.6.6-2 [114 kB]
-Get:46 http://debian.carnet.hr/debian/ unstable/main libdatrie1 sparc 0.2.6-2 [27.2 kB]
-Get:47 http://debian.carnet.hr/debian/ unstable/main libunistring0 sparc 0.9.3-5 [416 kB]
-Get:48 http://debian.carnet.hr/debian/ unstable/main libgettextpo0 sparc 0.18.1.1-10 [130 kB]
-Get:49 http://debian.carnet.hr/debian/ unstable/main libgfortran3 sparc 4.8.0-7 [266 kB]
-Get:50 http://debian.carnet.hr/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
-Get:51 http://debian.carnet.hr/debian/ unstable/main libice6 sparc 2:1.0.8-2 [56.0 kB]
-Get:52 http://debian.carnet.hr/debian/ unstable/main libjpeg8 sparc 8d-1 [137 kB]
-Get:53 http://debian.carnet.hr/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
-Get:54 http://debian.carnet.hr/debian/ unstable/main libthai0 sparc 0.1.19-2 [40.8 kB]
-Get:55 http://debian.carnet.hr/debian/ unstable/main libxft2 sparc 2.3.1-1 [56.0 kB]
-Get:56 http://debian.carnet.hr/debian/ unstable/main fontconfig sparc 2.9.0-7.1 [347 kB]
-Get:57 http://debian.carnet.hr/debian/ unstable/main libpango1.0-0 sparc 1.30.0-1 [422 kB]
-Get:58 http://debian.carnet.hr/debian/ unstable/main libpaper1 sparc 1.1.24+nmu2 [21.2 kB]
-Get:59 http://debian.carnet.hr/debian/ unstable/main libpcrecpp0 sparc 1:8.31-2 [126 kB]
-Get:60 http://debian.carnet.hr/debian/ unstable/main libsm6 sparc 2:1.2.1-2 [32.1 kB]
-Get:61 http://debian.carnet.hr/debian/ unstable/main libjbig0 sparc 2.0-2 [31.6 kB]
-Get:62 http://debian.carnet.hr/debian/ unstable/main libtiff5 sparc 4.0.2-6 [223 kB]
-Get:63 http://debian.carnet.hr/debian/ unstable/main libxss1 sparc 1:1.2.2-1 [16.7 kB]
-Get:64 http://debian.carnet.hr/debian/ unstable/main libxt6 sparc 1:1.1.3-1 [181 kB]
-Get:65 http://debian.carnet.hr/debian/ unstable/main libmpc3 sparc 1.0.1-1 [37.4 kB]
-Get:66 http://debian.carnet.hr/debian/ unstable/main file sparc 1:5.14-1 [53.4 kB]
-Get:67 http://debian.carnet.hr/debian/ unstable/main gettext-base sparc 0.18.1.1-10 [148 kB]
-Get:68 http://debian.carnet.hr/debian/ unstable/main cdbs all 0.4.121 [80.5 kB]
-Get:69 http://debian.carnet.hr/debian/ unstable/main libstdc++6-4.6-dev sparc 4.6.4-2 [1661 kB]
-Get:70 http://debian.carnet.hr/debian/ unstable/main g++-4.6 sparc 4.6.4-2 [5479 kB]
-Get:71 http://debian.carnet.hr/debian/ unstable/main gcc-4.6 sparc 4.6.4-2 [3658 kB]
-Get:72 http://debian.carnet.hr/debian/ unstable/main cpp-4.6 sparc 4.6.4-2 [3461 kB]
-Get:73 http://debian.carnet.hr/debian/ unstable/main gcc-4.6-base sparc 4.6.4-2 [143 kB]
-Get:74 http://debian.carnet.hr/debian/ unstable/main html2text sparc 1.3.2a-15 [100 kB]
-Get:75 http://debian.carnet.hr/debian/ unstable/main libasprintf-dev sparc 0.18.1.1-10 [26.6 kB]
-Get:76 http://debian.carnet.hr/debian/ unstable/main libgettextpo-dev sparc 0.18.1.1-10 [172 kB]
-Get:77 http://debian.carnet.hr/debian/ unstable/main gettext sparc 0.18.1.1-10 [1745 kB]
-Get:78 http://debian.carnet.hr/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
-Get:79 http://debian.carnet.hr/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
-Get:80 http://debian.carnet.hr/debian/ unstable/main gfortran-4.6 sparc 4.6.4-2 [4076 kB]
-Get:81 http://debian.carnet.hr/debian/ unstable/main gfortran sparc 4:4.6.3-8 [1124 B]
-Get:82 http://debian.carnet.hr/debian/ unstable/main libblas3 sparc 1.2.20110419-5 [191 kB]
-Get:83 http://debian.carnet.hr/debian/ unstable/main libblas-dev sparc 1.2.20110419-5 [208 kB]
-Get:84 http://debian.carnet.hr/debian/ unstable/main libbz2-dev sparc 1.0.6-4 [36.3 kB]
-Get:85 http://debian.carnet.hr/debian/ unstable/main libjpeg8-dev sparc 8d-1 [243 kB]
-Get:86 http://debian.carnet.hr/debian/ unstable/main liblapack3 sparc 3.4.2+dfsg-1 [4089 kB]
-Get:87 http://debian.carnet.hr/debian/ unstable/main liblapack-dev sparc 3.4.2+dfsg-1 [4840 kB]
-Get:88 http://debian.carnet.hr/debian/ unstable/main libtinfo-dev sparc 5.9+20130504-1 [101 kB]
-Get:89 http://debian.carnet.hr/debian/ unstable/main libncurses5-dev sparc 5.9+20130504-1 [207 kB]
-Get:90 http://debian.carnet.hr/debian/ unstable/main libpaper-utils sparc 1.1.24+nmu2 [17.8 kB]
-Get:91 http://debian.carnet.hr/debian/ unstable/main libpcre3-dev sparc 1:8.31-2 [360 kB]
-Get:92 http://debian.carnet.hr/debian/ unstable/main zlib1g-dev sparc 1:1.2.8.dfsg-1 [213 kB]
-Get:93 http://debian.carnet.hr/debian/ unstable/main libpng12-dev sparc 1.2.49-4 [263 kB]
-Get:94 http://debian.carnet.hr/debian/ unstable/main libreadline6-dev sparc 6.2+dfsg-0.1 [184 kB]
-Get:95 http://debian.carnet.hr/debian/ unstable/main libreadline-dev sparc 6.2+dfsg-0.1 [898 B]
-Get:96 http://debian.carnet.hr/debian/ unstable/main zip sparc 3.0-7 [332 kB]
-Get:97 http://debian.carnet.hr/debian/ unstable/main unzip sparc 6.0-9 [191 kB]
-Get:98 http://debian.carnet.hr/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
-Get:99 http://debian.carnet.hr/debian/ unstable/main tcl8.5 sparc 8.5.11-2 [1582 kB]
-Get:100 http://debian.carnet.hr/debian/ unstable/main tk8.5 sparc 8.5.11-2 [1130 kB]
+ gcc-4.8-base libgcc1 libgomp1 libstdc++6
+4 upgraded, 98 newly installed, 0 to remove and 22 not upgraded.
+Need to get 58.4 MB/58.4 MB of archives.
+After this operation, 120 MB of additional disk space will be used.
+Get:1 http://ftp.hr.debian.org/debian/ unstable/main libgomp1 sparc 4.8.1-8 [23.0 kB]
+Get:2 http://ftp.hr.debian.org/debian/ unstable/main gcc-4.8-base sparc 4.8.1-8 [150 kB]
+Get:3 http://ftp.hr.debian.org/debian/ unstable/main libstdc++6 sparc 4.8.1-8 [345 kB]
+Get:4 http://ftp.hr.debian.org/debian/ unstable/main libgcc1 sparc 1:4.8.1-8 [31.1 kB]
+Get:5 http://ftp.hr.debian.org/debian/ unstable/main libpipeline1 sparc 1.2.4-1 [37.6 kB]
+Get:6 http://ftp.hr.debian.org/debian/ unstable/main libudev0 sparc 175-7.2 [122 kB]
+Get:7 http://ftp.hr.debian.org/debian/ unstable/main groff-base sparc 1.22.2-3 [692 kB]
+Get:8 http://ftp.hr.debian.org/debian/ unstable/main bsdmainutils sparc 9.0.5 [204 kB]
+Get:9 http://ftp.hr.debian.org/debian/ unstable/main man-db sparc 2.6.5-2 [946 kB]
+Get:10 http://ftp.hr.debian.org/debian/ unstable/main libasprintf0c2 sparc 0.18.3-1 [29.5 kB]
+Get:11 http://ftp.hr.debian.org/debian/ unstable/main libmagic1 sparc 1:5.14-2 [212 kB]
+Get:12 http://ftp.hr.debian.org/debian/ unstable/main libxml2 sparc 2.9.1+dfsg1-2 [841 kB]
+Get:13 http://ftp.hr.debian.org/debian/ unstable/main libdrm2 sparc 2.4.45-3 [464 kB]
+Get:14 http://ftp.hr.debian.org/debian/ unstable/main libglapi-mesa sparc 9.1.4-1 [61.1 kB]
+Get:15 http://ftp.hr.debian.org/debian/ unstable/main libxau6 sparc 1:1.0.8-1 [19.7 kB]
+Get:16 http://ftp.hr.debian.org/debian/ unstable/main libxdmcp6 sparc 1:1.1.1-1 [25.1 kB]
+Get:17 http://ftp.hr.debian.org/debian/ unstable/main libxcb1 sparc 1.9.1-3 [40.3 kB]
+Get:18 http://ftp.hr.debian.org/debian/ unstable/main libxcb-dri2-0 sparc 1.9.1-3 [11.9 kB]
+Get:19 http://ftp.hr.debian.org/debian/ unstable/main libgbm1 sparc 9.1.4-1 [319 kB]
+Get:20 http://ftp.hr.debian.org/debian/ unstable/main libffi6 sparc 3.0.13-4 [19.7 kB]
+Get:21 http://ftp.hr.debian.org/debian/ unstable/main libwayland-client0 sparc 1.1.0-2 [19.7 kB]
+Get:22 http://ftp.hr.debian.org/debian/ unstable/main libwayland-server0 sparc 1.1.0-2 [26.9 kB]
+Get:23 http://ftp.hr.debian.org/debian/ unstable/main libx11-data all 2:1.6.0-1 [191 kB]
+Get:24 http://ftp.hr.debian.org/debian/ unstable/main libx11-6 sparc 2:1.6.0-1 [860 kB]
+Get:25 http://ftp.hr.debian.org/debian/ unstable/main libx11-xcb1 sparc 2:1.6.0-1 [153 kB]
+Get:26 http://ftp.hr.debian.org/debian/ unstable/main libxcb-render0 sparc 1.9.1-3 [16.3 kB]
+Get:27 http://ftp.hr.debian.org/debian/ unstable/main libxcb-shape0 sparc 1.9.1-3 [10.8 kB]
+Get:28 http://ftp.hr.debian.org/debian/ unstable/main libxcb-xfixes0 sparc 1.9.1-3 [13.4 kB]
+Get:29 http://ftp.hr.debian.org/debian/ unstable/main libegl1-mesa sparc 9.1.4-1 [73.0 kB]
+Get:30 http://ftp.hr.debian.org/debian/ unstable/main libexpat1 sparc 2.1.0-4 [131 kB]
+Get:31 http://ftp.hr.debian.org/debian/ unstable/main libfreetype6 sparc 2.4.9-1.1 [409 kB]
+Get:32 http://ftp.hr.debian.org/debian/ unstable/main ucf all 3.0027+nmu1 [70.6 kB]
+Get:33 http://ftp.hr.debian.org/debian/ unstable/main fonts-dejavu-core all 2.33+svn2514-3 [1042 kB]
+Get:34 http://ftp.hr.debian.org/debian/ unstable/main ttf-dejavu-core all 2.33+svn2514-3 [29.8 kB]
+Get:35 http://ftp.hr.debian.org/debian/ unstable/main fontconfig-config all 2.10.2-2 [251 kB]
+Get:36 http://ftp.hr.debian.org/debian/ unstable/main libfontconfig1 sparc 2.10.2-2 [311 kB]
+Get:37 http://ftp.hr.debian.org/debian/ unstable/main libxcb-glx0 sparc 1.9.1-3 [24.5 kB]
+Get:38 http://ftp.hr.debian.org/debian/ unstable/main libxfixes3 sparc 1:5.0.1-1 [20.9 kB]
+Get:39 http://ftp.hr.debian.org/debian/ unstable/main libxdamage1 sparc 1:1.1.4-1 [14.5 kB]
+Get:40 http://ftp.hr.debian.org/debian/ unstable/main libxext6 sparc 2:1.3.2-1 [50.1 kB]
+Get:41 http://ftp.hr.debian.org/debian/ unstable/main libxxf86vm1 sparc 1:1.1.2-1+deb7u1 [18.2 kB]
+Get:42 http://ftp.hr.debian.org/debian/ unstable/main libgl1-mesa-glx sparc 9.1.4-1 [119 kB]
+Get:43 http://ftp.hr.debian.org/debian/ unstable/main libpixman-1-0 sparc 0.30.0-2 [417 kB]
+Get:44 http://ftp.hr.debian.org/debian/ unstable/main libpng12-0 sparc 1.2.49-4 [181 kB]
+Get:45 http://ftp.hr.debian.org/debian/ unstable/main libxcb-shm0 sparc 1.9.1-3 [10.3 kB]
+Get:46 http://ftp.hr.debian.org/debian/ unstable/main libxrender1 sparc 1:0.9.8-1 [30.7 kB]
+Get:47 http://ftp.hr.debian.org/debian/ unstable/main libcairo2 sparc 1.12.14-5 [993 kB]
+Get:48 http://ftp.hr.debian.org/debian/ unstable/main libglib2.0-0 sparc 2.36.3-3 [1859 kB]
+Get:49 http://ftp.hr.debian.org/debian/ unstable/main libcroco3 sparc 0.6.8-2 [115 kB]
+Get:50 http://ftp.hr.debian.org/debian/ unstable/main libdatrie1 sparc 0.2.6-2 [27.2 kB]
+Get:51 http://ftp.hr.debian.org/debian/ unstable/main libgfortran3 sparc 4.8.1-8 [266 kB]
+Get:52 http://ftp.hr.debian.org/debian/ unstable/main libgraphite2-3 sparc 1.2.3-1 [57.3 kB]
+Get:53 http://ftp.hr.debian.org/debian/ unstable/main libharfbuzz0a sparc 0.9.19-1 [432 kB]
+Get:54 http://ftp.hr.debian.org/debian/ unstable/main x11-common all 1:7.7+3 [284 kB]
+Get:55 http://ftp.hr.debian.org/debian/ unstable/main libice6 sparc 2:1.0.8-2 [56.0 kB]
+Get:56 http://ftp.hr.debian.org/debian/ unstable/main libjpeg8 sparc 8d-1 [137 kB]
+Get:57 http://ftp.hr.debian.org/debian/ unstable/main libthai-data all 0.1.19-2 [156 kB]
+Get:58 http://ftp.hr.debian.org/debian/ unstable/main libthai0 sparc 0.1.19-2 [40.8 kB]
+Get:59 http://ftp.hr.debian.org/debian/ unstable/main fontconfig sparc 2.10.2-2 [373 kB]
+Get:60 http://ftp.hr.debian.org/debian/ unstable/main libpango-1.0-0 sparc 1.32.5-5+b1 [245 kB]
+Get:61 http://ftp.hr.debian.org/debian/ unstable/main libpangoft2-1.0-0 sparc 1.32.5-5+b1 [181 kB]
+Get:62 http://ftp.hr.debian.org/debian/ unstable/main libpangocairo-1.0-0 sparc 1.32.5-5+b1 [172 kB]
+Get:63 http://ftp.hr.debian.org/debian/ unstable/main libpaper1 sparc 1.1.24+nmu2 [21.2 kB]
+Get:64 http://ftp.hr.debian.org/debian/ unstable/main libpcrecpp0 sparc 1:8.31-2 [126 kB]
+Get:65 http://ftp.hr.debian.org/debian/ unstable/main libsm6 sparc 2:1.2.1-2 [32.1 kB]
+Get:66 http://ftp.hr.debian.org/debian/ unstable/main libjbig0 sparc 2.0-2 [31.6 kB]
+Get:67 http://ftp.hr.debian.org/debian/ unstable/main libtiff5 sparc 4.0.3-1 [225 kB]
+Get:68 http://ftp.hr.debian.org/debian/ unstable/main libunistring0 sparc 0.9.3-5 [416 kB]
+Get:69 http://ftp.hr.debian.org/debian/ unstable/main libxft2 sparc 2.3.1-1 [56.0 kB]
+Get:70 http://ftp.hr.debian.org/debian/ unstable/main libxss1 sparc 1:1.2.2-1 [16.7 kB]
+Get:71 http://ftp.hr.debian.org/debian/ unstable/main libxt6 sparc 1:1.1.3-1+deb7u1 [181 kB]
+Get:72 http://ftp.hr.debian.org/debian/ unstable/main file sparc 1:5.14-2 [53.4 kB]
+Get:73 http://ftp.hr.debian.org/debian/ unstable/main gettext-base sparc 0.18.3-1 [156 kB]
+Get:74 http://ftp.hr.debian.org/debian/ unstable/main cdbs all 0.4.122 [81.4 kB]
+Get:75 http://ftp.hr.debian.org/debian/ unstable/main gettext sparc 0.18.3-1 [1850 kB]
+Get:76 http://ftp.hr.debian.org/debian/ unstable/main intltool-debian all 0.35.0+20060710.1 [30.8 kB]
+Get:77 http://ftp.hr.debian.org/debian/ unstable/main po-debconf all 1.0.16+nmu2 [224 kB]
+Get:78 http://ftp.hr.debian.org/debian/ unstable/main debhelper all 9.20130630 [710 kB]
+Get:79 http://ftp.hr.debian.org/debian/ unstable/main gfortran-4.6 sparc 4.6.4-4 [4075 kB]
+Get:80 http://ftp.hr.debian.org/debian/ unstable/main gfortran sparc 4:4.6.4-2 [1130 B]
+Get:81 http://ftp.hr.debian.org/debian/ unstable/main libblas3 sparc 1.2.20110419-5 [191 kB]
+Get:82 http://ftp.hr.debian.org/debian/ unstable/main libblas-dev sparc 1.2.20110419-5 [208 kB]
+Get:83 http://ftp.hr.debian.org/debian/ unstable/main libbz2-dev sparc 1.0.6-4 [36.3 kB]
+Get:84 http://ftp.hr.debian.org/debian/ unstable/main libjpeg8-dev sparc 8d-1 [243 kB]
+Get:85 http://ftp.hr.debian.org/debian/ unstable/main liblapack3 sparc 3.4.2+dfsg-1 [4089 kB]
+Get:86 http://ftp.hr.debian.org/debian/ unstable/main liblapack-dev sparc 3.4.2+dfsg-1 [4840 kB]
+Get:87 http://ftp.hr.debian.org/debian/ unstable/main libtinfo-dev sparc 5.9+20130608-1 [101 kB]
+Get:88 http://ftp.hr.debian.org/debian/ unstable/main libncurses5-dev sparc 5.9+20130608-1 [205 kB]
+Get:89 http://ftp.hr.debian.org/debian/ unstable/main libpaper-utils sparc 1.1.24+nmu2 [17.8 kB]
+Get:90 http://ftp.hr.debian.org/debian/ unstable/main libpcre3-dev sparc 1:8.31-2 [360 kB]
+Get:91 http://ftp.hr.debian.org/debian/ unstable/main zlib1g-dev sparc 1:1.2.8.dfsg-1 [213 kB]
+Get:92 http://ftp.hr.debian.org/debian/ unstable/main libpng12-dev sparc 1.2.49-4 [263 kB]
+Get:93 http://ftp.hr.debian.org/debian/ unstable/main libreadline6-dev sparc 6.2+dfsg-0.1 [184 kB]
+Get:94 http://ftp.hr.debian.org/debian/ unstable/main libreadline-dev sparc 6.2+dfsg-0.1 [898 B]
+Get:95 http://ftp.hr.debian.org/debian/ unstable/main zip sparc 3.0-7 [332 kB]
+Get:96 http://ftp.hr.debian.org/debian/ unstable/main unzip sparc 6.0-9 [191 kB]
+Get:97 http://ftp.hr.debian.org/debian/ unstable/main xdg-utils all 1.1.0~rc1+git20111210-7 [83.7 kB]
+Get:98 http://ftp.hr.debian.org/debian/ unstable/main tcl8.5 sparc 8.5.14-2 [1598 kB]
+Get:99 http://ftp.hr.debian.org/debian/ unstable/main tk8.5 sparc 8.5.14-2 [1137 kB]
+Get:100 http://ftp.hr.debian.org/debian/ unstable/main r-base-core sparc 3.0.1-6 [21.4 MB]
+Get:101 http://ftp.hr.debian.org/debian/ unstable/main r-base-dev all 3.0.1-6 [3898 B]
debconf: delaying package configuration, since apt-utils is not installed
-Fetched 87.1 MB in 48s (1779 kB/s)
-(Reading database ... 11171 files and directories currently installed.)
-Preparing to replace libc6-dev-sparc64 2.13-38 (using .../libc6-dev-sparc64_2.17-2_sparc.deb) ...
-Unpacking replacement libc6-dev-sparc64 ...
-Preparing to replace libc6-dev:sparc 2.13-38 (using .../libc6-dev_2.17-2_sparc.deb) ...
-Unpacking replacement libc6-dev:sparc ...
-Preparing to replace libc-dev-bin 2.13-38 (using .../libc-dev-bin_2.17-2_sparc.deb) ...
-Unpacking replacement libc-dev-bin ...
-Preparing to replace libc6-sparc64 2.13-38 (using .../libc6-sparc64_2.17-2_sparc.deb) ...
-Unpacking replacement libc6-sparc64 ...
-Preparing to replace libgomp1:sparc 4.8.0-6 (using .../libgomp1_4.8.0-7_sparc.deb) ...
+Fetched 58.4 MB in 49s (1178 kB/s)
+(Reading database ... 11276 files and directories currently installed.)
+Preparing to replace libgomp1:sparc 4.8.1-7 (using .../libgomp1_4.8.1-8_sparc.deb) ...
Unpacking replacement libgomp1:sparc ...
-Preparing to replace gcc-4.8-base:sparc 4.8.0-6 (using .../gcc-4.8-base_4.8.0-7_sparc.deb) ...
+Preparing to replace gcc-4.8-base:sparc 4.8.1-7 (using .../gcc-4.8-base_4.8.1-8_sparc.deb) ...
Unpacking replacement gcc-4.8-base:sparc ...
-Setting up gcc-4.8-base:sparc (4.8.0-7) ...
-(Reading database ... 11193 files and directories currently installed.)
-Preparing to replace libgcc1:sparc 1:4.8.0-6 (using .../libgcc1_1%3a4.8.0-7_sparc.deb) ...
-Unpacking replacement libgcc1:sparc ...
-Setting up libgcc1:sparc (1:4.8.0-7) ...
-(Reading database ... 11193 files and directories currently installed.)
-Preparing to replace libc6:sparc 2.13-38 (using .../libc6_2.17-2_sparc.deb) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Unpacking replacement libc6:sparc ...
-Setting up libc6:sparc (2.17-2) ...
-Checking for services that may need to be restarted...
-Checking init scripts...
-Nothing to restart.
-(Reading database ... 11199 files and directories currently installed.)
-Preparing to replace libstdc++6:sparc 4.8.0-6 (using .../libstdc++6_4.8.0-7_sparc.deb) ...
+Setting up gcc-4.8-base:sparc (4.8.1-8) ...
+(Reading database ... 11276 files and directories currently installed.)
+Preparing to replace libstdc++6:sparc 4.8.1-7 (using .../libstdc++6_4.8.1-8_sparc.deb) ...
Unpacking replacement libstdc++6:sparc ...
-Setting up libstdc++6:sparc (4.8.0-7) ...
-(Reading database ... 11199 files and directories currently installed.)
-Preparing to replace libtinfo5:sparc 5.9-10 (using .../libtinfo5_5.9+20130504-1_sparc.deb) ...
-Unpacking replacement libtinfo5:sparc ...
-Setting up libtinfo5:sparc (5.9+20130504-1) ...
-(Reading database ... 11199 files and directories currently installed.)
-Preparing to replace libncurses5:sparc 5.9-10 (using .../libncurses5_5.9+20130504-1_sparc.deb) ...
-Unpacking replacement libncurses5:sparc ...
-Setting up libncurses5:sparc (5.9+20130504-1) ...
-(Reading database ... 11199 files and directories currently installed.)
-Preparing to replace ncurses-bin 5.9-10 (using .../ncurses-bin_5.9+20130504-1_sparc.deb) ...
-Unpacking replacement ncurses-bin ...
-Setting up ncurses-bin (5.9+20130504-1) ...
+Preparing to replace libgcc1:sparc 1:4.8.1-7 (using .../libgcc1_1%3a4.8.1-8_sparc.deb) ...
+Unpacking replacement libgcc1:sparc ...
+Setting up libgcc1:sparc (1:4.8.1-8) ...
+Setting up libstdc++6:sparc (4.8.1-8) ...
+Processing triggers for libc-bin ...
Selecting previously unselected package libpipeline1:sparc.
-(Reading database ... 11197 files and directories currently installed.)
-Unpacking libpipeline1:sparc (from .../libpipeline1_1.2.3-1_sparc.deb) ...
+(Reading database ... 11276 files and directories currently installed.)
+Unpacking libpipeline1:sparc (from .../libpipeline1_1.2.4-1_sparc.deb) ...
+Selecting previously unselected package libudev0:sparc.
+Unpacking libudev0:sparc (from .../libudev0_175-7.2_sparc.deb) ...
Selecting previously unselected package groff-base.
-Unpacking groff-base (from .../groff-base_1.22.2-2_sparc.deb) ...
+Unpacking groff-base (from .../groff-base_1.22.2-3_sparc.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.5_sparc.deb) ...
Selecting previously unselected package man-db.
-Unpacking man-db (from .../man-db_2.6.3-6_sparc.deb) ...
+Unpacking man-db (from .../man-db_2.6.5-2_sparc.deb) ...
Selecting previously unselected package libasprintf0c2:sparc.
-Unpacking libasprintf0c2:sparc (from .../libasprintf0c2_0.18.1.1-10_sparc.deb) ...
+Unpacking libasprintf0c2:sparc (from .../libasprintf0c2_0.18.3-1_sparc.deb) ...
Selecting previously unselected package libmagic1:sparc.
-Unpacking libmagic1:sparc (from .../libmagic1_1%3a5.14-1_sparc.deb) ...
-Selecting previously unselected package libpcre3:sparc.
-Unpacking libpcre3:sparc (from .../libpcre3_1%3a8.31-2_sparc.deb) ...
+Unpacking libmagic1:sparc (from .../libmagic1_1%3a5.14-2_sparc.deb) ...
Selecting previously unselected package libxml2:sparc.
-Unpacking libxml2:sparc (from .../libxml2_2.8.0+dfsg1-7+nmu1_sparc.deb) ...
+Unpacking libxml2:sparc (from .../libxml2_2.9.1+dfsg1-2_sparc.deb) ...
+Selecting previously unselected package libdrm2:sparc.
+Unpacking libdrm2:sparc (from .../libdrm2_2.4.45-3_sparc.deb) ...
+Selecting previously unselected package libglapi-mesa:sparc.
+Unpacking libglapi-mesa:sparc (from .../libglapi-mesa_9.1.4-1_sparc.deb) ...
+Selecting previously unselected package libxau6:sparc.
+Unpacking libxau6:sparc (from .../libxau6_1%3a1.0.8-1_sparc.deb) ...
+Selecting previously unselected package libxdmcp6:sparc.
+Unpacking libxdmcp6:sparc (from .../libxdmcp6_1%3a1.1.1-1_sparc.deb) ...
+Selecting previously unselected package libxcb1:sparc.
+Unpacking libxcb1:sparc (from .../libxcb1_1.9.1-3_sparc.deb) ...
+Selecting previously unselected package libxcb-dri2-0:sparc.
+Unpacking libxcb-dri2-0:sparc (from .../libxcb-dri2-0_1.9.1-3_sparc.deb) ...
+Selecting previously unselected package libgbm1:sparc.
+Unpacking libgbm1:sparc (from .../libgbm1_9.1.4-1_sparc.deb) ...
+Selecting previously unselected package libffi6:sparc.
+Unpacking libffi6:sparc (from .../libffi6_3.0.13-4_sparc.deb) ...
+Selecting previously unselected package libwayland-client0:sparc.
+Unpacking libwayland-client0:sparc (from .../libwayland-client0_1.1.0-2_sparc.deb) ...
+Selecting previously unselected package libwayland-server0:sparc.
+Unpacking libwayland-server0:sparc (from .../libwayland-server0_1.1.0-2_sparc.deb) ...
+Selecting previously unselected package libx11-data.
+Unpacking libx11-data (from .../libx11-data_2%3a1.6.0-1_all.deb) ...
+Selecting previously unselected package libx11-6:sparc.
+Unpacking libx11-6:sparc (from .../libx11-6_2%3a1.6.0-1_sparc.deb) ...
+Selecting previously unselected package libx11-xcb1:sparc.
+Unpacking libx11-xcb1:sparc (from .../libx11-xcb1_2%3a1.6.0-1_sparc.deb) ...
+Selecting previously unselected package libxcb-render0:sparc.
+Unpacking libxcb-render0:sparc (from .../libxcb-render0_1.9.1-3_sparc.deb) ...
+Selecting previously unselected package libxcb-shape0:sparc.
+Unpacking libxcb-shape0:sparc (from .../libxcb-shape0_1.9.1-3_sparc.deb) ...
+Selecting previously unselected package libxcb-xfixes0:sparc.
+Unpacking libxcb-xfixes0:sparc (from .../libxcb-xfixes0_1.9.1-3_sparc.deb) ...
+Selecting previously unselected package libegl1-mesa:sparc.
+Unpacking libegl1-mesa:sparc (from .../libegl1-mesa_9.1.4-1_sparc.deb) ...
Selecting previously unselected package libexpat1:sparc.
-Unpacking libexpat1:sparc (from .../libexpat1_2.1.0-3_sparc.deb) ...
+Unpacking libexpat1:sparc (from .../libexpat1_2.1.0-4_sparc.deb) ...
Selecting previously unselected package libfreetype6:sparc.
Unpacking libfreetype6:sparc (from .../libfreetype6_2.4.9-1.1_sparc.deb) ...
Selecting previously unselected package ucf.
-Unpacking ucf (from .../ucf_3.0025+nmu3_all.deb) ...
+Unpacking ucf (from .../ucf_3.0027+nmu1_all.deb) ...
Moving old data out of the way
Selecting previously unselected package fonts-dejavu-core.
Unpacking fonts-dejavu-core (from .../fonts-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package ttf-dejavu-core.
Unpacking ttf-dejavu-core (from .../ttf-dejavu-core_2.33+svn2514-3_all.deb) ...
Selecting previously unselected package fontconfig-config.
-Unpacking fontconfig-config (from .../fontconfig-config_2.9.0-7.1_all.deb) ...
+Unpacking fontconfig-config (from .../fontconfig-config_2.10.2-2_all.deb) ...
Selecting previously unselected package libfontconfig1:sparc.
-Unpacking libfontconfig1:sparc (from .../libfontconfig1_2.9.0-7.1_sparc.deb) ...
+Unpacking libfontconfig1:sparc (from .../libfontconfig1_2.10.2-2_sparc.deb) ...
+Selecting previously unselected package libxcb-glx0:sparc.
+Unpacking libxcb-glx0:sparc (from .../libxcb-glx0_1.9.1-3_sparc.deb) ...
+Selecting previously unselected package libxfixes3:sparc.
+Unpacking libxfixes3:sparc (from .../libxfixes3_1%3a5.0.1-1_sparc.deb) ...
+Selecting previously unselected package libxdamage1:sparc.
+Unpacking libxdamage1:sparc (from .../libxdamage1_1%3a1.1.4-1_sparc.deb) ...
+Selecting previously unselected package libxext6:sparc.
+Unpacking libxext6:sparc (from .../libxext6_2%3a1.3.2-1_sparc.deb) ...
+Selecting previously unselected package libxxf86vm1:sparc.
+Unpacking libxxf86vm1:sparc (from .../libxxf86vm1_1%3a1.1.2-1+deb7u1_sparc.deb) ...
+Selecting previously unselected package libgl1-mesa-glx:sparc.
+Unpacking libgl1-mesa-glx:sparc (from .../libgl1-mesa-glx_9.1.4-1_sparc.deb) ...
Selecting previously unselected package libpixman-1-0:sparc.
-Unpacking libpixman-1-0:sparc (from .../libpixman-1-0_0.26.0-4_sparc.deb) ...
+Unpacking libpixman-1-0:sparc (from .../libpixman-1-0_0.30.0-2_sparc.deb) ...
Selecting previously unselected package libpng12-0:sparc.
Unpacking libpng12-0:sparc (from .../libpng12-0_1.2.49-4_sparc.deb) ...
-Selecting previously unselected package libxau6:sparc.
-Unpacking libxau6:sparc (from .../libxau6_1%3a1.0.7-1_sparc.deb) ...
-Selecting previously unselected package libxdmcp6:sparc.
-Unpacking libxdmcp6:sparc (from .../libxdmcp6_1%3a1.1.1-1_sparc.deb) ...
-Selecting previously unselected package libxcb1:sparc.
-Unpacking libxcb1:sparc (from .../libxcb1_1.8.1-2_sparc.deb) ...
-Selecting previously unselected package libx11-data.
-Unpacking libx11-data (from .../libx11-data_2%3a1.5.0-1_all.deb) ...
-Selecting previously unselected package libx11-6:sparc.
-Unpacking libx11-6:sparc (from .../libx11-6_2%3a1.5.0-1_sparc.deb) ...
-Selecting previously unselected package libxcb-render0:sparc.
-Unpacking libxcb-render0:sparc (from .../libxcb-render0_1.8.1-2_sparc.deb) ...
Selecting previously unselected package libxcb-shm0:sparc.
-Unpacking libxcb-shm0:sparc (from .../libxcb-shm0_1.8.1-2_sparc.deb) ...
-Selecting previously unselected package libxext6:sparc.
-Unpacking libxext6:sparc (from .../libxext6_2%3a1.3.1-2_sparc.deb) ...
+Unpacking libxcb-shm0:sparc (from .../libxcb-shm0_1.9.1-3_sparc.deb) ...
Selecting previously unselected package libxrender1:sparc.
-Unpacking libxrender1:sparc (from .../libxrender1_1%3a0.9.7-1_sparc.deb) ...
+Unpacking libxrender1:sparc (from .../libxrender1_1%3a0.9.8-1_sparc.deb) ...
Selecting previously unselected package libcairo2:sparc.
-Unpacking libcairo2:sparc (from .../libcairo2_1.12.14-4_sparc.deb) ...
-Selecting previously unselected package libffi6:sparc.
-Unpacking libffi6:sparc (from .../libffi6_3.0.13-4_sparc.deb) ...
+Unpacking libcairo2:sparc (from .../libcairo2_1.12.14-5_sparc.deb) ...
Selecting previously unselected package libglib2.0-0:sparc.
-Unpacking libglib2.0-0:sparc (from .../libglib2.0-0_2.36.1-2build1_sparc.deb) ...
+Unpacking libglib2.0-0:sparc (from .../libglib2.0-0_2.36.3-3_sparc.deb) ...
Selecting previously unselected package libcroco3:sparc.
-Unpacking libcroco3:sparc (from .../libcroco3_0.6.6-2_sparc.deb) ...
+Unpacking libcroco3:sparc (from .../libcroco3_0.6.8-2_sparc.deb) ...
Selecting previously unselected package libdatrie1:sparc.
Unpacking libdatrie1:sparc (from .../libdatrie1_0.2.6-2_sparc.deb) ...
-Selecting previously unselected package libunistring0:sparc.
-Unpacking libunistring0:sparc (from .../libunistring0_0.9.3-5_sparc.deb) ...
-Selecting previously unselected package libgettextpo0:sparc.
-Unpacking libgettextpo0:sparc (from .../libgettextpo0_0.18.1.1-10_sparc.deb) ...
Selecting previously unselected package libgfortran3:sparc.
-Unpacking libgfortran3:sparc (from .../libgfortran3_4.8.0-7_sparc.deb) ...
+Unpacking libgfortran3:sparc (from .../libgfortran3_4.8.1-8_sparc.deb) ...
+Selecting previously unselected package libgraphite2-3:sparc.
+Unpacking libgraphite2-3:sparc (from .../libgraphite2-3_1.2.3-1_sparc.deb) ...
+Selecting previously unselected package libharfbuzz0a:sparc.
+Unpacking libharfbuzz0a:sparc (from .../libharfbuzz0a_0.9.19-1_sparc.deb) ...
Selecting previously unselected package x11-common.
Unpacking x11-common (from .../x11-common_1%3a7.7+3_all.deb) ...
Selecting previously unselected package libice6:sparc.
@@ -440,12 +422,14 @@ Selecting previously unselected package libthai-data.
Unpacking libthai-data (from .../libthai-data_0.1.19-2_all.deb) ...
Selecting previously unselected package libthai0:sparc.
Unpacking libthai0:sparc (from .../libthai0_0.1.19-2_sparc.deb) ...
-Selecting previously unselected package libxft2:sparc.
-Unpacking libxft2:sparc (from .../libxft2_2.3.1-1_sparc.deb) ...
Selecting previously unselected package fontconfig.
-Unpacking fontconfig (from .../fontconfig_2.9.0-7.1_sparc.deb) ...
-Selecting previously unselected package libpango1.0-0:sparc.
-Unpacking libpango1.0-0:sparc (from .../libpango1.0-0_1.30.0-1_sparc.deb) ...
+Unpacking fontconfig (from .../fontconfig_2.10.2-2_sparc.deb) ...
+Selecting previously unselected package libpango-1.0-0:sparc.
+Unpacking libpango-1.0-0:sparc (from .../libpango-1.0-0_1.32.5-5+b1_sparc.deb) ...
+Selecting previously unselected package libpangoft2-1.0-0:sparc.
+Unpacking libpangoft2-1.0-0:sparc (from .../libpangoft2-1.0-0_1.32.5-5+b1_sparc.deb) ...
+Selecting previously unselected package libpangocairo-1.0-0:sparc.
+Unpacking libpangocairo-1.0-0:sparc (from .../libpangocairo-1.0-0_1.32.5-5+b1_sparc.deb) ...
Selecting previously unselected package libpaper1:sparc.
Unpacking libpaper1:sparc (from .../libpaper1_1.1.24+nmu2_sparc.deb) ...
Selecting previously unselected package libpcrecpp0:sparc.
@@ -455,47 +439,33 @@ Unpacking libsm6:sparc (from .../libsm6_2%3a1.2.1-2_sparc.deb) ...
Selecting previously unselected package libjbig0:sparc.
Unpacking libjbig0:sparc (from .../libjbig0_2.0-2_sparc.deb) ...
Selecting previously unselected package libtiff5:sparc.
-Unpacking libtiff5:sparc (from .../libtiff5_4.0.2-6_sparc.deb) ...
+Unpacking libtiff5:sparc (from .../libtiff5_4.0.3-1_sparc.deb) ...
+Selecting previously unselected package libunistring0:sparc.
+Unpacking libunistring0:sparc (from .../libunistring0_0.9.3-5_sparc.deb) ...
+Selecting previously unselected package libxft2:sparc.
+Unpacking libxft2:sparc (from .../libxft2_2.3.1-1_sparc.deb) ...
Selecting previously unselected package libxss1:sparc.
Unpacking libxss1:sparc (from .../libxss1_1%3a1.2.2-1_sparc.deb) ...
Selecting previously unselected package libxt6:sparc.
-Unpacking libxt6:sparc (from .../libxt6_1%3a1.1.3-1_sparc.deb) ...
-Selecting previously unselected package libmpc3:sparc.
-Unpacking libmpc3:sparc (from .../libmpc3_1.0.1-1_sparc.deb) ...
+Unpacking libxt6:sparc (from .../libxt6_1%3a1.1.3-1+deb7u1_sparc.deb) ...
Selecting previously unselected package file.
-Unpacking file (from .../file_1%3a5.14-1_sparc.deb) ...
+Unpacking file (from .../file_1%3a5.14-2_sparc.deb) ...
Selecting previously unselected package gettext-base.
-Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_sparc.deb) ...
+Unpacking gettext-base (from .../gettext-base_0.18.3-1_sparc.deb) ...
Selecting previously unselected package cdbs.
-Unpacking cdbs (from .../archives/cdbs_0.4.121_all.deb) ...
-Preparing to replace libstdc++6-4.6-dev 4.6.3-15 (using .../libstdc++6-4.6-dev_4.6.4-2_sparc.deb) ...
-Unpacking replacement libstdc++6-4.6-dev ...
-Preparing to replace g++-4.6 4.6.3-15 (using .../g++-4.6_4.6.4-2_sparc.deb) ...
-Unpacking replacement g++-4.6 ...
-Preparing to replace gcc-4.6 4.6.3-15 (using .../gcc-4.6_4.6.4-2_sparc.deb) ...
-Unpacking replacement gcc-4.6 ...
-Preparing to replace cpp-4.6 4.6.3-15 (using .../cpp-4.6_4.6.4-2_sparc.deb) ...
-Unpacking replacement cpp-4.6 ...
-Preparing to replace gcc-4.6-base:sparc 4.6.3-15 (using .../gcc-4.6-base_4.6.4-2_sparc.deb) ...
-Unpacking replacement gcc-4.6-base:sparc ...
-Selecting previously unselected package html2text.
-Unpacking html2text (from .../html2text_1.3.2a-15_sparc.deb) ...
-Selecting previously unselected package libasprintf-dev:sparc.
-Unpacking libasprintf-dev:sparc (from .../libasprintf-dev_0.18.1.1-10_sparc.deb) ...
-Selecting previously unselected package libgettextpo-dev:sparc.
-Unpacking libgettextpo-dev:sparc (from .../libgettextpo-dev_0.18.1.1-10_sparc.deb) ...
+Unpacking cdbs (from .../archives/cdbs_0.4.122_all.deb) ...
Selecting previously unselected package gettext.
-Unpacking gettext (from .../gettext_0.18.1.1-10_sparc.deb) ...
+Unpacking gettext (from .../gettext_0.18.3-1_sparc.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
-Unpacking debhelper (from .../debhelper_9.20130516_all.deb) ...
+Unpacking debhelper (from .../debhelper_9.20130630_all.deb) ...
Selecting previously unselected package gfortran-4.6.
-Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-2_sparc.deb) ...
+Unpacking gfortran-4.6 (from .../gfortran-4.6_4.6.4-4_sparc.deb) ...
Selecting previously unselected package gfortran.
-Unpacking gfortran (from .../gfortran_4%3a4.6.3-8_sparc.deb) ...
+Unpacking gfortran (from .../gfortran_4%3a4.6.4-2_sparc.deb) ...
Selecting previously unselected package libblas3.
Unpacking libblas3 (from .../libblas3_1.2.20110419-5_sparc.deb) ...
Selecting previously unselected package libblas-dev.
@@ -509,9 +479,9 @@ Unpacking liblapack3 (from .../liblapack3_3.4.2+dfsg-1_sparc.deb) ...
Selecting previously unselected package liblapack-dev.
Unpacking liblapack-dev (from .../liblapack-dev_3.4.2+dfsg-1_sparc.deb) ...
Selecting previously unselected package libtinfo-dev:sparc.
-Unpacking libtinfo-dev:sparc (from .../libtinfo-dev_5.9+20130504-1_sparc.deb) ...
+Unpacking libtinfo-dev:sparc (from .../libtinfo-dev_5.9+20130608-1_sparc.deb) ...
Selecting previously unselected package libncurses5-dev:sparc.
-Unpacking libncurses5-dev:sparc (from .../libncurses5-dev_5.9+20130504-1_sparc.deb) ...
+Unpacking libncurses5-dev:sparc (from .../libncurses5-dev_5.9+20130608-1_sparc.deb) ...
Selecting previously unselected package libpaper-utils.
Unpacking libpaper-utils (from .../libpaper-utils_1.1.24+nmu2_sparc.deb) ...
Selecting previously unselected package libpcre3-dev:sparc.
@@ -531,92 +501,102 @@ Unpacking unzip (from .../archives/unzip_6.0-9_sparc.deb) ...
Selecting previously unselected package xdg-utils.
Unpacking xdg-utils (from .../xdg-utils_1.1.0~rc1+git20111210-7_all.deb) ...
Selecting previously unselected package tcl8.5.
-Unpacking tcl8.5 (from .../tcl8.5_8.5.11-2_sparc.deb) ...
+Unpacking tcl8.5 (from .../tcl8.5_8.5.14-2_sparc.deb) ...
Selecting previously unselected package tk8.5.
-Unpacking tk8.5 (from .../tk8.5_8.5.11-2_sparc.deb) ...
+Unpacking tk8.5 (from .../tk8.5_8.5.14-2_sparc.deb) ...
Selecting previously unselected package r-base-core.
-Unpacking r-base-core (from .../r-base-core_3.0.1-1_sparc.deb) ...
+Unpacking r-base-core (from .../r-base-core_3.0.1-6_sparc.deb) ...
Selecting previously unselected package r-base-dev.
-Unpacking r-base-dev (from .../r-base-dev_3.0.1-1_all.deb) ...
-Setting up libc6-sparc64 (2.17-2) ...
-Setting up libc-dev-bin (2.17-2) ...
-Setting up libc6-dev:sparc (2.17-2) ...
-Setting up libc6-dev-sparc64 (2.17-2) ...
-Setting up libgomp1:sparc (4.8.0-7) ...
-Setting up libpipeline1:sparc (1.2.3-1) ...
-Setting up groff-base (1.22.2-2) ...
+Unpacking r-base-dev (from .../r-base-dev_3.0.1-6_all.deb) ...
+Selecting previously unselected package sbuild-build-depends-r-bioc-limma-dummy.
+Unpacking sbuild-build-depends-r-bioc-limma-dummy (from .../sbuild-build-depends-r-bioc-limma-dummy.deb) ...
+Setting up libgomp1:sparc (4.8.1-8) ...
+Setting up libpipeline1:sparc (1.2.4-1) ...
+Setting up libudev0:sparc (175-7.2) ...
+Setting up groff-base (1.22.2-3) ...
Setting up bsdmainutils (9.0.5) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
-Setting up man-db (2.6.3-6) ...
+Setting up man-db (2.6.5-2) ...
Not building database; man-db/auto-update is not 'true'.
-Setting up libasprintf0c2:sparc (0.18.1.1-10) ...
-Setting up libmagic1:sparc (1:5.14-1) ...
-Setting up libpcre3:sparc (1:8.31-2) ...
-Setting up libxml2:sparc (2.8.0+dfsg1-7+nmu1) ...
-Setting up libexpat1:sparc (2.1.0-3) ...
+Setting up libasprintf0c2:sparc (0.18.3-1) ...
+Setting up libmagic1:sparc (1:5.14-2) ...
+Setting up libxml2:sparc (2.9.1+dfsg1-2) ...
+Setting up libdrm2:sparc (2.4.45-3) ...
+Setting up libglapi-mesa:sparc (9.1.4-1) ...
+Setting up libxau6:sparc (1:1.0.8-1) ...
+Setting up libxdmcp6:sparc (1:1.1.1-1) ...
+Setting up libxcb1:sparc (1.9.1-3) ...
+Setting up libxcb-dri2-0:sparc (1.9.1-3) ...
+Setting up libgbm1:sparc (9.1.4-1) ...
+Setting up libffi6:sparc (3.0.13-4) ...
+Setting up libwayland-client0:sparc (1.1.0-2) ...
+Setting up libwayland-server0:sparc (1.1.0-2) ...
+Setting up libx11-data (2:1.6.0-1) ...
+Setting up libx11-6:sparc (2:1.6.0-1) ...
+Setting up libx11-xcb1:sparc (2:1.6.0-1) ...
+Setting up libxcb-render0:sparc (1.9.1-3) ...
+Setting up libxcb-shape0:sparc (1.9.1-3) ...
+Setting up libxcb-xfixes0:sparc (1.9.1-3) ...
+Setting up libegl1-mesa:sparc (9.1.4-1) ...
+Setting up libexpat1:sparc (2.1.0-4) ...
Setting up libfreetype6:sparc (2.4.9-1.1) ...
-Setting up ucf (3.0025+nmu3) ...
+Setting up ucf (3.0027+nmu1) ...
Setting up fonts-dejavu-core (2.33+svn2514-3) ...
Setting up ttf-dejavu-core (2.33+svn2514-3) ...
-Setting up fontconfig-config (2.9.0-7.1) ...
-Setting up libfontconfig1:sparc (2.9.0-7.1) ...
-Setting up libpixman-1-0:sparc (0.26.0-4) ...
+Setting up fontconfig-config (2.10.2-2) ...
+Setting up libfontconfig1:sparc (2.10.2-2) ...
+Setting up libxcb-glx0:sparc (1.9.1-3) ...
+Setting up libxfixes3:sparc (1:5.0.1-1) ...
+Setting up libxdamage1:sparc (1:1.1.4-1) ...
+Setting up libxext6:sparc (2:1.3.2-1) ...
+Setting up libxxf86vm1:sparc (1:1.1.2-1+deb7u1) ...
+Setting up libgl1-mesa-glx:sparc (9.1.4-1) ...
+Setting up libpixman-1-0:sparc (0.30.0-2) ...
Setting up libpng12-0:sparc (1.2.49-4) ...
-Setting up libxau6:sparc (1:1.0.7-1) ...
-Setting up libxdmcp6:sparc (1:1.1.1-1) ...
-Setting up libxcb1:sparc (1.8.1-2) ...
-Setting up libx11-data (2:1.5.0-1) ...
-Setting up libx11-6:sparc (2:1.5.0-1) ...
-Setting up libxcb-render0:sparc (1.8.1-2) ...
-Setting up libxcb-shm0:sparc (1.8.1-2) ...
-Setting up libxext6:sparc (2:1.3.1-2) ...
-Setting up libxrender1:sparc (1:0.9.7-1) ...
-Setting up libcairo2:sparc (1.12.14-4) ...
-Setting up libffi6:sparc (3.0.13-4) ...
-Setting up libglib2.0-0:sparc (2.36.1-2build1) ...
+Setting up libxcb-shm0:sparc (1.9.1-3) ...
+Setting up libxrender1:sparc (1:0.9.8-1) ...
+Setting up libcairo2:sparc (1.12.14-5) ...
+Setting up libglib2.0-0:sparc (2.36.3-3) ...
No schema files found: doing nothing.
-Setting up libcroco3:sparc (0.6.6-2) ...
+Setting up libcroco3:sparc (0.6.8-2) ...
Setting up libdatrie1:sparc (0.2.6-2) ...
-Setting up libunistring0:sparc (0.9.3-5) ...
-Setting up libgettextpo0:sparc (0.18.1.1-10) ...
-Setting up libgfortran3:sparc (4.8.0-7) ...
+Setting up libgfortran3:sparc (4.8.1-8) ...
+Setting up libgraphite2-3:sparc (1.2.3-1) ...
+Setting up libharfbuzz0a:sparc (0.9.19-1) ...
Setting up x11-common (1:7.7+3) ...
+update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libice6:sparc (2:1.0.8-2) ...
Setting up libjpeg8:sparc (8d-1) ...
Setting up libthai-data (0.1.19-2) ...
Setting up libthai0:sparc (0.1.19-2) ...
-Setting up libxft2:sparc (2.3.1-1) ...
-Setting up fontconfig (2.9.0-7.1) ...
+Setting up fontconfig (2.10.2-2) ...
Regenerating fonts cache... done.
-Setting up libpango1.0-0:sparc (1.30.0-1) ...
+Setting up libpango-1.0-0:sparc (1.32.5-5+b1) ...
+Setting up libpangoft2-1.0-0:sparc (1.32.5-5+b1) ...
+Setting up libpangocairo-1.0-0:sparc (1.32.5-5+b1) ...
Setting up libpaper1:sparc (1.1.24+nmu2) ...
Creating config file /etc/papersize with new version
Setting up libpcrecpp0:sparc (1:8.31-2) ...
Setting up libsm6:sparc (2:1.2.1-2) ...
Setting up libjbig0:sparc (2.0-2) ...
-Setting up libtiff5:sparc (4.0.2-6) ...
+Setting up libtiff5:sparc (4.0.3-1) ...
+Setting up libunistring0:sparc (0.9.3-5) ...
+Setting up libxft2:sparc (2.3.1-1) ...
Setting up libxss1:sparc (1:1.2.2-1) ...
-Setting up libxt6:sparc (1:1.1.3-1) ...
-Setting up libmpc3:sparc (1.0.1-1) ...
-Setting up file (1:5.14-1) ...
-Setting up gettext-base (0.18.1.1-10) ...
-Setting up cdbs (0.4.121) ...
-Setting up gcc-4.6-base:sparc (4.6.4-2) ...
-Setting up cpp-4.6 (4.6.4-2) ...
-Setting up gcc-4.6 (4.6.4-2) ...
-Setting up html2text (1.3.2a-15) ...
-Setting up libasprintf-dev:sparc (0.18.1.1-10) ...
-Setting up libgettextpo-dev:sparc (0.18.1.1-10) ...
-Setting up gettext (0.18.1.1-10) ...
+Setting up libxt6:sparc (1:1.1.3-1+deb7u1) ...
+Setting up file (1:5.14-2) ...
+Setting up gettext-base (0.18.3-1) ...
+Setting up cdbs (0.4.122) ...
+Setting up gettext (0.18.3-1) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
-Setting up debhelper (9.20130516) ...
-Setting up gfortran-4.6 (4.6.4-2) ...
-Setting up gfortran (4:4.6.3-8) ...
+Setting up debhelper (9.20130630) ...
+Setting up gfortran-4.6 (4.6.4-4) ...
+Setting up gfortran (4:4.6.4-2) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
Setting up libblas3 (1.2.20110419-5) ...
update-alternatives: using /usr/lib/libblas/libblas.so.3 to provide /usr/lib/libblas.so.3 (libblas.so.3) in auto mode
@@ -628,8 +608,8 @@ Setting up liblapack3 (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so.3 to provide /usr/lib/liblapack.so.3 (liblapack.so.3) in auto mode
Setting up liblapack-dev (3.4.2+dfsg-1) ...
update-alternatives: using /usr/lib/lapack/liblapack.so to provide /usr/lib/liblapack.so (liblapack.so) in auto mode
-Setting up libtinfo-dev:sparc (5.9+20130504-1) ...
-Setting up libncurses5-dev:sparc (5.9+20130504-1) ...
+Setting up libtinfo-dev:sparc (5.9+20130608-1) ...
+Setting up libncurses5-dev:sparc (5.9+20130608-1) ...
Setting up libpaper-utils (1.1.24+nmu2) ...
Setting up libpcre3-dev:sparc (1:8.31-2) ...
Setting up zlib1g-dev:sparc (1:1.2.8.dfsg-1) ...
@@ -639,28 +619,24 @@ Setting up libreadline-dev:sparc (6.2+dfsg-0.1) ...
Setting up zip (3.0-7) ...
Setting up unzip (6.0-9) ...
Setting up xdg-utils (1.1.0~rc1+git20111210-7) ...
-Setting up tcl8.5 (8.5.11-2) ...
+Setting up tcl8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/tclsh8.5 to provide /usr/bin/tclsh (tclsh) in auto mode
-Setting up tk8.5 (8.5.11-2) ...
+Setting up tk8.5 (8.5.14-2) ...
update-alternatives: using /usr/bin/wish8.5 to provide /usr/bin/wish (wish) in auto mode
-Setting up r-base-core (3.0.1-1) ...
+Setting up r-base-core (3.0.1-6) ...
Creating config file /etc/R/Renviron with new version
-Setting up r-base-dev (3.0.1-1) ...
-Setting up g++-4.6 (4.6.4-2) ...
-Setting up libstdc++6-4.6-dev (4.6.4-2) ...
-Removing negative dependencies:
-Reading package lists...
-Building dependency tree...
-Reading state information...
-The following package was automatically installed and is no longer required:
- libmpc2
-Use 'apt-get autoremove' to remove it.
-0 upgraded, 0 newly installed, 0 to remove and 16 not upgraded.
-Checking correctness of dependencies...
+Setting up r-base-dev (3.0.1-6) ...
+Setting up sbuild-build-depends-r-bioc-limma-dummy (0.invalid.0) ...
+Processing triggers for libc-bin ...
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Build environment │
+└──────────────────────────────────────────────────────────────────────────────┘
+
Kernel: Linux 2.6.32-5-sparc64-smp sparc (sparc64)
-Toolchain package versions: binutils_2.22-8 dpkg-dev_1.16.10 g++-4.6_4.6.4-2 gcc-4.6_4.6.4-2 libc6-dev_2.17-2 libstdc++6_4.8.0-7 libstdc++6-4.6-dev_4.6.4-2 linux-libc-dev_3.2.41-2
-Package versions: apt_0.9.8 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.22-8 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.3 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.121 coreutils_8.13-3.3 cpp_4:4.6.3-8 cpp-4.6_4.6.4-2 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130516 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 fakeroot_1.18.4-2 file_1:5.14-1 findutils_4.4.2-5 fontco [...]
+Toolchain package versions: binutils_2.23.52.20130722-1 dpkg-dev_1.16.10 g++-4.6_4.6.4-4 gcc-4.6_4.6.4-4 libc6-dev_2.17-7 libstdc++6_4.8.1-8 libstdc++6-4.6-dev_4.6.4-4 linux-libc-dev_3.10.1-1
+Package versions: apt_0.9.9.2 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 binutils_2.23.52.20130722-1 bsdmainutils_9.0.5 bsdutils_1:2.20.1-5.5 build-essential_11.6 bzip2_1.0.6-4 cdbs_0.4.122 coreutils_8.21-1 cpp_4:4.6.4-2 cpp-4.6_4.6.4-4 dash_0.5.7-3 debconf_1.5.50 debfoster_2.7-1.2 debhelper_9.20130630 debian-archive-keyring_2012.4 debianutils_4.3.4 diffutils_1:3.2-8 dpkg_1.16.10 dpkg-dev_1.16.10 e2fslibs_1.42.5-1.1 e2fsprogs_1.42.5-1.1 eatmydata_26-2 fakeroot_1.19-2 file_1:5.14-2 [...]
┌──────────────────────────────────────────────────────────────────────────────┐
│ Build │
@@ -670,28 +646,48 @@ Package versions: apt_0.9.8 base-files_7.2 base-passwd_3.5.26 bash_4.2+dfsg-1 bi
Unpack source
─────────────
-gpgv: keyblock resource `/home/buildd/.gnupg/trustedkeys.gpg': file open error
-gpgv: Signature made Thu May 16 14:46:42 2013 UTC using DSA key ID C09FD35A
+gpgv: keyblock resource `/sbuild-nonexistent/.gnupg/trustedkeys.gpg': file open error
+gpgv: Signature made Sun Aug 4 08:50:07 2013 UTC using RSA key ID 2295D502
gpgv: Can't check signature: public key not found
-dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.3~dfsg-1.dsc
-dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.3~dfsg
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg.orig.tar.gz
-dpkg-source: info: unpacking r-bioc-limma_3.16.3~dfsg-1.debian.tar.gz
+dpkg-source: warning: failed to verify signature on ./r-bioc-limma_3.16.7~dfsg-1.dsc
+dpkg-source: info: extracting r-bioc-limma in r-bioc-limma-3.16.7~dfsg
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg.orig.tar.gz
+dpkg-source: info: unpacking r-bioc-limma_3.16.7~dfsg-1.debian.tar.gz
Check disc space
────────────────
+Sufficient free space for build
+
+User Environment
+────────────────
+
+DEB_BUILD_OPTIONS=parallel=2
+HOME=/sbuild-nonexistent
+LOGNAME=buildd
+PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
+SCHROOT_ALIAS_NAME=sid-sparc-sbuild
+SCHROOT_CHROOT_NAME=sid-sparc-sbuild
+SCHROOT_COMMAND=env
+SCHROOT_GID=1009
+SCHROOT_GROUP=buildd
+SCHROOT_SESSION_ID=sid-sparc-sbuild-c5c72772-8c5a-466f-94da-40fa81a065a6
+SCHROOT_UID=2952
+SCHROOT_USER=buildd
+SHELL=/bin/sh
+TERM=linux
+USER=buildd
+USERNAME=buildd
dpkg-buildpackage
─────────────────
dpkg-buildpackage: source package r-bioc-limma
-dpkg-buildpackage: source version 3.16.3~dfsg-1
- dpkg-source --before-build r-bioc-limma-3.16.3~dfsg
+dpkg-buildpackage: source version 3.16.7~dfsg-1
+ dpkg-source --before-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: host architecture sparc
fakeroot debian/rules clean
test -x debian/rules
-dh_testroot
dh_clean
rm -f debian/r-bioc-limma.substvars
rm -f debian/r-bioc-limma.*.debhelper
@@ -707,7 +703,7 @@ dh_clean
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
rm -f *-stamp
if test -d src; then \
- find src -regex ".*\..*o" | \
+ find src -regex ".*\.o" | \
xargs --no-run-if-empty -r rm; \
fi
rm -f config.log config.status
@@ -726,26 +722,26 @@ dh_installdirs -A
mkdir -p "."
dh_installdirs usr/lib/R/site-library
install -d debian/r-bioc-limma/usr/lib/R/site-library
-echo "R:Depends=r-base-core (>= 3.0.1-1)" >> debian/r-bioc-limma.substvars
+echo "R:Depends=r-base-core (>= 3.0.1-6)" >> debian/r-bioc-limma.substvars
if test -f /usr/bin/xvfb-run; then \
xvfb-run -a \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library --clean \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library --clean \
. ; \
else \
- R CMD INSTALL -l /build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library \
+ R CMD INSTALL -l /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library \
--clean . ;\
fi
* installing *source* package 'limma' ...
** libs
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fPIC -O3 -pipe -g -c normexp.c -o normexp.o
normexp.c: In function 'fit_saddle_nelder_mead':
normexp.c:153:3: warning: floating constant exceeds range of 'double' [-Woverflow]
gcc -std=gnu99 -shared -o limma.so normexp.o -L/usr/lib/R/lib -lR
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Entering directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/src'
-make[1]: Leaving directory `/build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/src'
-installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+make[1]: Entering directory `/«PKGBUILDDIR»/src'
+make[1]: Leaving directory `/«PKGBUILDDIR»/src'
+installing to /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/libs
** R
** inst
** preparing package for lazy loading
@@ -755,13 +751,13 @@ installing to /build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma
** installing vignettes
** testing if installed package can be loaded
* DONE (limma)
-rm -vf /build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
+rm -vf /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/R.css \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/COPYING \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/lib/R/site-library/limma/LICENSE.txt
if test -f debian/overrides; then \
- install -d /build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides ; \
+ install -d /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides ; \
install -m 0644 debian/overrides \
- /build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
+ /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/lintian/overrides/r-bioc-limma; \
fi
Adding cdbs dependencies to debian/r-bioc-limma.substvars
dh_installdirs -pr-bioc-limma
@@ -769,7 +765,7 @@ chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/CITATION
chmod 644 debian/r-bioc-limma/usr/lib/R/site-library/limma/doc/*
dh_installdocs -pr-bioc-limma
install -g 0 -o 0 -d debian/r-bioc-limma/usr/share/doc/r-bioc-limma
- cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
+ cd 'tests/..' && find 'tests' \( -type f -or -type l \) -and ! -empty -exec cp --parents -dp {} /«PKGBUILDDIR»/debian/r-bioc-limma/usr/share/doc/r-bioc-limma \;
cp -a debian/README.test debian/r-bioc-limma/usr/share/doc/r-bioc-limma
chown -R 0:0 debian/r-bioc-limma/usr/share/doc
chmod -R go=rX debian/r-bioc-limma/usr/share/doc
@@ -805,9 +801,9 @@ dh_strip -pr-bioc-limma
strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/r-bioc-limma/usr/lib/R/site-library/limma/libs/limma.so
dh_compress -pr-bioc-limma
cd debian/r-bioc-limma
- chmod a-x usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R
- gzip -9nf usr/share/doc/r-bioc-limma/changelog.Debian usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/tests/limma-Tests.R
- cd '/build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq/r-bioc-limma-3.16.3~dfsg'
+ chmod a-x usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog.Debian
+ gzip -9nf usr/share/doc/r-bioc-limma/changelog usr/share/doc/r-bioc-limma/tests/limma-Tests.R usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save usr/share/doc/r-bioc-limma/changelog.Debian
+ cd '/«PKGBUILDDIR»'
dh_fixperms -pr-bioc-limma
find debian/r-bioc-limma -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
find debian/r-bioc-limma ! -type l -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
@@ -838,79 +834,76 @@ dh_md5sums -pr-bioc-limma
chown 0:0 debian/r-bioc-limma/DEBIAN/md5sums
dh_builddeb -pr-bioc-limma
dpkg-deb --build debian/r-bioc-limma ..
-dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.3~dfsg-1_sparc.deb'.
- dpkg-genchanges -B -msparc Build Daemon (lebrun) <buildd_sparc-lebrun at buildd.debian.org> >../r-bioc-limma_3.16.3~dfsg-1_sparc.changes
+dpkg-deb: building package `r-bioc-limma' in `../r-bioc-limma_3.16.7~dfsg-1_sparc.deb'.
+ dpkg-genchanges -B -msparc Build Daemon (schroeder) <buildd_sparc-schroeder at buildd.debian.org> >../r-bioc-limma_3.16.7~dfsg-1_sparc.changes
dpkg-genchanges: arch-specific upload - not including arch-independent packages
dpkg-genchanges: binary-only upload - not including any source code
- dpkg-source --after-build r-bioc-limma-3.16.3~dfsg
+ dpkg-source --after-build r-bioc-limma-3.16.7~dfsg
dpkg-buildpackage: binary only upload (no source included)
────────────────────────────────────────────────────────────────────────────────
-Build finished at 20130516-2351
+Build finished at 20130804-1129
+
+Finished
+────────
+
+I: Built successfully
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Post Build Chroot │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+┌──────────────────────────────────────────────────────────────────────────────┐
+│ Changes │
+└──────────────────────────────────────────────────────────────────────────────┘
+
+
+r-bioc-limma_3.16.7~dfsg-1_sparc.changes:
+─────────────────────────────────────────
-r-bioc-limma_3.16.3~dfsg-1_sparc.changes:
Format: 1.8
-Date: Thu, 16 May 2013 15:16:13 +0200
+Date: Sun, 04 Aug 2013 17:28:41 +0900
Source: r-bioc-limma
Binary: r-bioc-limma
Architecture: sparc
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
Distribution: sid
Urgency: low
-Maintainer: sparc Build Daemon (lebrun) <buildd_sparc-lebrun at buildd.debian.org>
-Changed-By: Andreas Tille <tille at debian.org>
+Maintainer: sparc Build Daemon (schroeder) <buildd_sparc-schroeder at buildd.debian.org>
+Changed-By: Charles Plessy <plessy at debian.org>
Description:
r-bioc-limma - linear models for microarray data
Changes:
- r-bioc-limma (3.16.3~dfsg-1) unstable; urgency=low
- .
- [ Charles Plessy ]
- ff8c6db Imported Upstream version 3.12.1~dfsg
- b4f097e Effective license is GPL-2, without the '+', as R is GPL-2.
+ r-bioc-limma (3.16.7~dfsg-1) unstable; urgency=low
.
- [ Andreas Tille ]
- * Imported new upstream version 3.16.3~dfsg
- * debian/control
- - added myself to Uploaders
- - Removed DM-Upload-Allowed
- - Standards-Version: 3.9.4 (no changes needed)
- - Debhelper 9
- - Fake normalisation as it is done by `cme fix dpkg-control`
- (the command did actually no change - the control file was
- brought into shape manually)
- - Removed versioned dependency of r-base-dev
- * debian/copyright:
- - s/Removed/Files-Excluded/ to comply with the suggested format
- that might be processed by uscan as alternative method to
- filter-pristine-tar
- - checked new upstream version and bumped version number
- - Add years to Copyright fields
- * debian/rules: Remove executable flag from doc files
- * debian/source/format: Add explicit source format specification
+ be4e6a5 Imported Upstream version 3.16.7~dfsg
+ 5d10f8d Normalised VCS URLs.
+ 3ed3572 Signal the presence of autopkgtest suite with a XS-Testsuite field.
Checksums-Sha1:
- fe525ca6a2c5907237b255283b2092eeb3163358 1616754 r-bioc-limma_3.16.3~dfsg-1_sparc.deb
+ 79c2a9b3dd22d514df9458bdff933cdb27f93a20 862840 r-bioc-limma_3.16.7~dfsg-1_sparc.deb
Checksums-Sha256:
- 5b5886331914770c6d8b531e03365a02b4ea55ace88db9ea6d915bbb15f8ac5f 1616754 r-bioc-limma_3.16.3~dfsg-1_sparc.deb
+ 0069ab3ecb8cf0f6aa3b723e31870664aeb5f6ff234299ad606198da2507dd66 862840 r-bioc-limma_3.16.7~dfsg-1_sparc.deb
Files:
- 2936eb726ac07bc09ca48be665bcd669 1616754 gnu-r optional r-bioc-limma_3.16.3~dfsg-1_sparc.deb
+ 6feb4ba518ae21cfde4d72461d8714f8 862840 gnu-r optional r-bioc-limma_3.16.7~dfsg-1_sparc.deb
┌──────────────────────────────────────────────────────────────────────────────┐
│ Package contents │
└──────────────────────────────────────────────────────────────────────────────┘
-r-bioc-limma_3.16.3~dfsg-1_sparc.deb
+r-bioc-limma_3.16.7~dfsg-1_sparc.deb
────────────────────────────────────
new debian package, version 2.0.
- size 1616754 bytes: control archive= 1667 bytes.
+ size 862840 bytes: control archive=1628 bytes.
773 bytes, 16 lines control
- 2621 bytes, 34 lines md5sums
+ 2539 bytes, 33 lines md5sums
Package: r-bioc-limma
- Version: 3.16.3~dfsg-1
+ Version: 3.16.7~dfsg-1
Architecture: sparc
Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
- Installed-Size: 1845
- Depends: libc6 (>= 2.6), r-base-core (>= 3.0.1-1)
+ Installed-Size: 1058
+ Depends: libc6 (>= 2.6), r-base-core (>= 3.0.1-6)
Section: gnu-r
Priority: optional
Homepage: http://bioinf.wehi.edu.au/limma/
@@ -922,89 +915,91 @@ r-bioc-limma_3.16.3~dfsg-1_sparc.deb
apply to all array platforms and treat Affymetrix, single channel and two
channel experiments in a unified way.
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/share/
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/share/doc/
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/share/doc/r-bioc-limma/
--rw-r--r-- root/root 437 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.test
--rw-r--r-- root/root 264 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/README.Debian
--rw-r--r-- root/root 2605 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/copyright
--rw-r--r-- root/root 31097 2013-05-02 00:02 ./usr/share/doc/r-bioc-limma/changelog.gz
--rw-r--r-- root/root 1153 2013-05-16 14:44 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/share/doc/r-bioc-limma/tests/
--rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/share/
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/share/doc/
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/share/doc/r-bioc-limma/
+-rw-r--r-- root/root 31495 2013-07-29 19:26 ./usr/share/doc/r-bioc-limma/changelog.gz
+-rw-r--r-- root/root 1601 2013-08-04 08:19 ./usr/share/doc/r-bioc-limma/copyright
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/share/doc/r-bioc-limma/tests/
-rw-r--r-- root/root 14649 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.Rout.save.gz
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/lib/
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/lib/R/
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/lib/R/site-library/
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/lib/R/site-library/limma/
--rw-r--r-- root/root 2046 2013-05-16 23:51 ./usr/lib/R/site-library/limma/NAMESPACE
--rw-r--r-- root/root 10085 2013-05-16 23:51 ./usr/lib/R/site-library/limma/INDEX
--rw-r--r-- root/root 991 2013-05-16 23:51 ./usr/lib/R/site-library/limma/DESCRIPTION
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/lib/R/site-library/limma/help/
--rw-r--r-- root/root 1397 2013-05-16 23:51 ./usr/lib/R/site-library/limma/help/paths.rds
--rw-r--r-- root/root 2567 2013-05-16 23:51 ./usr/lib/R/site-library/limma/help/aliases.rds
--rw-r--r-- root/root 3418 2013-05-16 23:51 ./usr/lib/R/site-library/limma/help/limma.rdx
--rw-r--r-- root/root 494512 2013-05-16 23:51 ./usr/lib/R/site-library/limma/help/limma.rdb
--rw-r--r-- root/root 6703 2013-05-16 23:51 ./usr/lib/R/site-library/limma/help/AnIndex
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/lib/R/site-library/limma/R/
--rw-r--r-- root/root 1056 2013-05-16 23:51 ./usr/lib/R/site-library/limma/R/limma
--rw-r--r-- root/root 4117 2013-05-16 23:51 ./usr/lib/R/site-library/limma/R/limma.rdx
--rw-r--r-- root/root 206551 2013-05-16 23:51 ./usr/lib/R/site-library/limma/R/limma.rdb
--rw-r--r-- root/root 963 2013-05-16 23:51 ./usr/lib/R/site-library/limma/CITATION
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/lib/R/site-library/limma/doc/
--rw-r--r-- root/root 45597 2013-05-16 23:51 ./usr/lib/R/site-library/limma/doc/limma.pdf
--rw-r--r-- root/root 102936 2013-05-16 23:51 ./usr/lib/R/site-library/limma/doc/changelog.txt
--rw-r--r-- root/root 673 2013-05-16 23:51 ./usr/lib/R/site-library/limma/doc/index.html
--rw-r--r-- root/root 1711 2013-05-16 23:51 ./usr/lib/R/site-library/limma/doc/limma.Rnw
--rw-r--r-- root/root 806089 2013-05-16 23:51 ./usr/lib/R/site-library/limma/doc/usersguide.pdf
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/lib/R/site-library/limma/Meta/
--rw-r--r-- root/root 219 2013-05-16 23:51 ./usr/lib/R/site-library/limma/Meta/vignette.rds
--rw-r--r-- root/root 5944 2013-05-16 23:51 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
--rw-r--r-- root/root 541 2013-05-16 23:51 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
--rw-r--r-- root/root 3089 2013-05-16 23:51 ./usr/lib/R/site-library/limma/Meta/links.rds
--rw-r--r-- root/root 6375 2013-05-16 23:51 ./usr/lib/R/site-library/limma/Meta/Rd.rds
--rw-r--r-- root/root 1069 2013-05-16 23:51 ./usr/lib/R/site-library/limma/Meta/package.rds
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/lib/R/site-library/limma/libs/
--rw-r--r-- root/root 8168 2013-05-16 23:51 ./usr/lib/R/site-library/limma/libs/limma.so
-drwxr-xr-x root/root 0 2013-05-16 23:51 ./usr/lib/R/site-library/limma/html/
--rw-r--r-- root/root 1179 2013-05-16 23:51 ./usr/lib/R/site-library/limma/html/R.css
--rw-r--r-- root/root 37337 2013-05-16 23:51 ./usr/lib/R/site-library/limma/html/00Index.html
--rw-r--r-- root/root 11214 2013-05-16 23:51 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 2097 2013-04-03 22:18 ./usr/share/doc/r-bioc-limma/tests/limma-Tests.R.gz
+-rw-r--r-- root/root 264 2012-08-06 05:39 ./usr/share/doc/r-bioc-limma/README.Debian
+-rw-r--r-- root/root 437 2012-08-06 05:47 ./usr/share/doc/r-bioc-limma/README.test
+-rw-r--r-- root/root 1247 2013-08-04 08:29 ./usr/share/doc/r-bioc-limma/changelog.Debian.gz
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/lib/
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/lib/R/
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/lib/R/site-library/
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/lib/R/site-library/limma/
+-rw-r--r-- root/root 10085 2013-08-04 11:29 ./usr/lib/R/site-library/limma/INDEX
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/lib/R/site-library/limma/html/
+-rw-r--r-- root/root 1179 2013-08-04 11:29 ./usr/lib/R/site-library/limma/html/R.css
+-rw-r--r-- root/root 37564 2013-08-04 11:29 ./usr/lib/R/site-library/limma/html/00Index.html
+-rw-r--r-- root/root 2095 2013-08-04 11:29 ./usr/lib/R/site-library/limma/NAMESPACE
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/lib/R/site-library/limma/help/
+-rw-r--r-- root/root 6742 2013-08-04 11:29 ./usr/lib/R/site-library/limma/help/AnIndex
+-rw-r--r-- root/root 3437 2013-08-04 11:29 ./usr/lib/R/site-library/limma/help/limma.rdx
+-rw-r--r-- root/root 492679 2013-08-04 11:29 ./usr/lib/R/site-library/limma/help/limma.rdb
+-rw-r--r-- root/root 1392 2013-08-04 11:29 ./usr/lib/R/site-library/limma/help/paths.rds
+-rw-r--r-- root/root 2577 2013-08-04 11:29 ./usr/lib/R/site-library/limma/help/aliases.rds
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/lib/R/site-library/limma/doc/
+-rw-r--r-- root/root 104280 2013-08-04 11:29 ./usr/lib/R/site-library/limma/doc/changelog.txt
+-rw-r--r-- root/root 1711 2013-08-04 11:29 ./usr/lib/R/site-library/limma/doc/limma.Rnw
+-rw-r--r-- root/root 673 2013-08-04 11:29 ./usr/lib/R/site-library/limma/doc/index.html
+-rw-r--r-- root/root 45597 2013-08-04 11:29 ./usr/lib/R/site-library/limma/doc/limma.pdf
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/lib/R/site-library/limma/Meta/
+-rw-r--r-- root/root 6386 2013-08-04 11:29 ./usr/lib/R/site-library/limma/Meta/Rd.rds
+-rw-r--r-- root/root 5952 2013-08-04 11:29 ./usr/lib/R/site-library/limma/Meta/hsearch.rds
+-rw-r--r-- root/root 219 2013-08-04 11:29 ./usr/lib/R/site-library/limma/Meta/vignette.rds
+-rw-r--r-- root/root 542 2013-08-04 11:29 ./usr/lib/R/site-library/limma/Meta/nsInfo.rds
+-rw-r--r-- root/root 3098 2013-08-04 11:29 ./usr/lib/R/site-library/limma/Meta/links.rds
+-rw-r--r-- root/root 1072 2013-08-04 11:29 ./usr/lib/R/site-library/limma/Meta/package.rds
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/lib/R/site-library/limma/R/
+-rw-r--r-- root/root 4119 2013-08-04 11:29 ./usr/lib/R/site-library/limma/R/limma.rdx
+-rw-r--r-- root/root 207870 2013-08-04 11:29 ./usr/lib/R/site-library/limma/R/limma.rdb
+-rw-r--r-- root/root 1056 2013-08-04 11:29 ./usr/lib/R/site-library/limma/R/limma
+-rw-r--r-- root/root 963 2013-08-04 11:29 ./usr/lib/R/site-library/limma/CITATION
+drwxr-xr-x root/root 0 2013-08-04 11:29 ./usr/lib/R/site-library/limma/libs/
+-rw-r--r-- root/root 8168 2013-08-04 11:29 ./usr/lib/R/site-library/limma/libs/limma.so
+-rw-r--r-- root/root 11214 2013-08-04 11:29 ./usr/lib/R/site-library/limma/NEWS.Rd
+-rw-r--r-- root/root 991 2013-08-04 11:29 ./usr/lib/R/site-library/limma/DESCRIPTION
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Finished │
+│ Post Build │
└──────────────────────────────────────────────────────────────────────────────┘
-Built successfully
-────────────────────────────────────────────────────────────────────────────────
┌──────────────────────────────────────────────────────────────────────────────┐
-│ Post Build │
+│ Cleanup │
└──────────────────────────────────────────────────────────────────────────────┘
-Purging /var/lib/schroot/mount/sid-sparc-sbuild-2cedecfb-33cf-4e38-926f-87c666e90b84/build/buildd-r-bioc-limma_3.16.3~dfsg-1-sparc-dGuCDq
+Purging /«BUILDDIR»
Not cleaning session: cloned chroot in use
┌──────────────────────────────────────────────────────────────────────────────┐
│ Summary │
└──────────────────────────────────────────────────────────────────────────────┘
-Architecture: sparc
-Build-Space: 5880
+Build Architecture: sparc
+Build-Space: 3544
Build-Time: 51
Distribution: sid
-Install-Time: 274
-Job: r-bioc-limma_3.16.3~dfsg-1
+Host Architecture: sparc
+Install-Time: 121
+Job: r-bioc-limma_3.16.7~dfsg-1
+Machine Architecture: sparc
Package: r-bioc-limma
-Package-Time: 410
-Source-Version: 3.16.3~dfsg-1
-Space: 5880
+Package-Time: 266
+Source-Version: 3.16.7~dfsg-1
+Space: 3544
Status: successful
-Version: 3.16.3~dfsg-1
+Version: 3.16.7~dfsg-1
────────────────────────────────────────────────────────────────────────────────
-Finished at 20130516-2351
-Build needed 00:06:50, 5880k disc space
-Signature with key 'B16CDE7F' requested:
+Finished at 20130804-1129
+Build needed 00:04:26, 3544k disc space
+Signature with key 'B3666332' requested:
+ signfile /home/buildd/build/r-bioc-limma_3.16.7~dfsg-1_sparc.changes B3666332
+
+Successfully signed changes file
--
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