[med-svn] [pysam] 02/13: Merge tag 'upstream/0.7.1'

[Charles Plessy]

This is an automated email from the git hooks/post-receive script.

plessy pushed a commit to branch master
in repository pysam.

commit d3756a48ec57eb24f2585f27ac0f2a16d4e00ccc
Merge: d8131e1 11d2148
Author: Charles Plessy <plessy at debian.org>
Date:   Fri Aug 9 18:34:24 2013 +0900

    Merge tag 'upstream/0.7.1'
    
    Upstream version 0.7.1
    
    # gpg: Signature made Fri 09 Aug 2013 18:34:23 JST using RSA key ID 2295D502
    # gpg: Good signature from "Charles Plessy <plessy at debian.org>"

 MANIFEST.in                |    3 +-
 PKG-INFO                   |    2 +-
 pysam.egg-info/PKG-INFO    |    2 +-
 pysam.egg-info/SOURCES.txt |    2 +-
 pysam/TabProxies.c         |    4 +-
 pysam/VCF.py               | 1087 -----
 pysam/__init__.py          |    2 +-
 pysam/csamtools.c          |10764 ++++++++++++++++----------------------------
 pysam/csamtools.pyx        |    8 +-
 pysam/ctabix.c             | 1670 +++----
 pysam/ctabix.pyx           |    3 +
 pysam/cvcf.c               |   33 +-
 pysam/version.py           |    2 +-
 setup.cfg                  |    4 +-
 setup.py                   |   43 +-
 tests/example_btag.bam     |  Bin 0 -> 771 bytes
 tests/pysam_test.py        |   10 +
 17 files changed, 4935 insertions(+), 8704 deletions(-)

-- 
Alioth's /git/debian-med/git-commit-notice on /srv/git.debian.org/git/debian-med/pysam.git