[med-svn] [pysam] 08/13: Merge tag 'upstream/0.7.4'

[Charles Plessy]

This is an automated email from the git hooks/post-receive script.

plessy pushed a commit to branch master
in repository pysam.

commit 256d5336f79afb34561c7527bc7433ce89a0c6d2
Merge: f48b0aa 356c1c8
Author: Charles Plessy <plessy at debian.org>
Date:   Fri Aug 9 18:34:36 2013 +0900

    Merge tag 'upstream/0.7.4'
    
    Upstream version 0.7.4
    
    # gpg: Signature made Fri 09 Aug 2013 18:34:36 JST using RSA key ID 2295D502
    # gpg: Good signature from "Charles Plessy <plessy at debian.org>"

 PKG-INFO                   |    2 +-
 pysam.egg-info/PKG-INFO    |    2 +-
 pysam.egg-info/SOURCES.txt |    7 +-
 pysam/TabProxies.c         |    4 +-
 pysam/VCF.py               | 1087 ---
 pysam/__init__.py          |    9 +-
 pysam/alternatives.py      |   82 -
 pysam/csamtools.c          |22245 +++++++++++++++++++-------------------------
 pysam/ctabix.c             | 1300 ++-
 pysam/cvcf.c               | 5735 +++++-------
 pysam/version.py           |    2 +-
 setup.cfg                  |    4 +-
 setup.py                   |   12 +-
 13 files changed, 12431 insertions(+), 18060 deletions(-)

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