[med-svn] r14517 - in trunk/packages/R: r-bioc-affy/trunk/debian r-bioc-rtracklayer/trunk/debian

[Andreas Tille]

Author: tille
Date: 2013-08-23 13:21:21 +0000 (Fri, 23 Aug 2013)
New Revision: 14517

Modified:
   trunk/packages/R/r-bioc-affy/trunk/debian/changelog
   trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog
Log:
Update todo lists in changelog entries


Modified: trunk/packages/R/r-bioc-affy/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-affy/trunk/debian/changelog	2013-08-23 13:14:57 UTC (rev 14516)
+++ trunk/packages/R/r-bioc-affy/trunk/debian/changelog	2013-08-23 13:21:21 UTC (rev 14517)
@@ -3,7 +3,7 @@
   * Initial release (closes: #???)
      TODO: Dependencies:
       affyio:         svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-affyio/trunk/  (uploaded to NEW)
-      BiocInstaller:  http://www.bioconductor.org/packages/2.12/bioc/html/BiocInstaller.html
+      BiocInstaller:  svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-biocinstaller/trunk/ (upload to NEW)
       preprocessCore: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-preprocesscore/trunk/ (uploaded to NEW)
 
  -- Andreas Tille <tille at debian.org>  Fri, 23 Aug 2013 09:23:02 +0200

Modified: trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog	2013-08-23 13:14:57 UTC (rev 14516)
+++ trunk/packages/R/r-bioc-rtracklayer/trunk/debian/changelog	2013-08-23 13:21:21 UTC (rev 14517)
@@ -3,12 +3,11 @@
   * Initial release (closes: #???).
     The following preconditions are needed but missing in Debian
       GenomicRanges: http://www.bioconductor.org/packages/release/bioc/html/GenomicRanges.html
-      IRanges:       http://bioconductor.org/packages/2.3/bioc/html/IRanges.html
+      IRanges:    svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-iranges/trunk/  (uploaded to NEW)
       Biostrings: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-biostrings/trunk/
       BSgenome:      http://bioconductor.org/packages/2.4/bioc/html/BSgenome.html
-      zlibbioc:      http://bioconductor.org/packages/2.12/bioc/html/zlibbioc.html
-            Remark:  This should *really* be avoided as the homepage confirms that it
-                     should not be needed on sites with zlib installed
+      zlibbioc:   See patches created for svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-affyio/trunk/
+                       --> these should work to avoid slibbioc
       RCurl:         http://cran.r-project.org/web/packages/RCurl/index.html
       Rsamtools:     http://www.bioconductor.org/packages/release/bioc/html/Rsamtools.html