[med-svn] r15406 - in trunk/packages/R/r-bioc-iranges/trunk/debian: . tests

[Andreas Tille]

Author: tille
Date: 2013-12-03 10:48:16 +0000 (Tue, 03 Dec 2013)
New Revision: 15406

Added:
   trunk/packages/R/r-bioc-iranges/trunk/debian/tests/
   trunk/packages/R/r-bioc-iranges/trunk/debian/tests/control
   trunk/packages/R/r-bioc-iranges/trunk/debian/tests/run-unit-test
Modified:
   trunk/packages/R/r-bioc-iranges/trunk/debian/README.test
   trunk/packages/R/r-bioc-iranges/trunk/debian/changelog
   trunk/packages/R/r-bioc-iranges/trunk/debian/control
Log:
New upstream version including better testing


Modified: trunk/packages/R/r-bioc-iranges/trunk/debian/README.test
===================================================================
--- trunk/packages/R/r-bioc-iranges/trunk/debian/README.test	2013-12-03 07:42:33 UTC (rev 15405)
+++ trunk/packages/R/r-bioc-iranges/trunk/debian/README.test	2013-12-03 10:48:16 UTC (rev 15406)
@@ -1,5 +1,11 @@
 Notes on how this package can be tested.
 ────────────────────────────────────────
 
-This package can be tested by loading it into R with the command
-‘library(IRanges)’ in order to confirm its integrity.
+This package can be tested by running the provided test:
+
+LC_ALL=C R --no-save <<EOT
+require("IRanges") || stop("unable to load IRanges package")
+IRanges:::.test()
+EOT
+
+in order to confirm its integrity.

Modified: trunk/packages/R/r-bioc-iranges/trunk/debian/changelog
===================================================================
--- trunk/packages/R/r-bioc-iranges/trunk/debian/changelog	2013-12-03 07:42:33 UTC (rev 15405)
+++ trunk/packages/R/r-bioc-iranges/trunk/debian/changelog	2013-12-03 10:48:16 UTC (rev 15406)
@@ -1,3 +1,11 @@
+r-bioc-iranges (1.20.6-1) unstable; urgency=low
+
+  * New upstream version
+  * debian/README.test: More detailed testing suggested
+  * debian/tests: Add unit test
+
+ -- Andreas Tille <tille at debian.org>  Tue, 03 Dec 2013 11:26:23 +0100
+
 r-bioc-iranges (1.20.4-1) unstable; urgency=low
 
   * New upstream version

Modified: trunk/packages/R/r-bioc-iranges/trunk/debian/control
===================================================================
--- trunk/packages/R/r-bioc-iranges/trunk/debian/control	2013-12-03 07:42:33 UTC (rev 15405)
+++ trunk/packages/R/r-bioc-iranges/trunk/debian/control	2013-12-03 10:48:16 UTC (rev 15406)
@@ -2,6 +2,7 @@
 Maintainer: Debian Med Packaging Team <debian-med-packaging at lists.alioth.debian.org>
 Uploaders: Andreas Tille <tille at debian.org>
 Section: gnu-r
+XS-Testsuite: autopkgtest
 Priority: optional
 Build-Depends: debhelper (>= 9),
                cdbs,

Added: trunk/packages/R/r-bioc-iranges/trunk/debian/tests/control
===================================================================
--- trunk/packages/R/r-bioc-iranges/trunk/debian/tests/control	                        (rev 0)
+++ trunk/packages/R/r-bioc-iranges/trunk/debian/tests/control	2013-12-03 10:48:16 UTC (rev 15406)
@@ -0,0 +1 @@
+Tests: run-unit-test

Added: trunk/packages/R/r-bioc-iranges/trunk/debian/tests/run-unit-test
===================================================================
--- trunk/packages/R/r-bioc-iranges/trunk/debian/tests/run-unit-test	                        (rev 0)
+++ trunk/packages/R/r-bioc-iranges/trunk/debian/tests/run-unit-test	2013-12-03 10:48:16 UTC (rev 15406)
@@ -0,0 +1,7 @@
+#!/bin/sh -e
+
+LC_ALL=C R --no-save <<EOT
+require("IRanges")
+IRanges:::.test()
+EOT
+