[med-svn] [htslib] branch develop updated (c8ec7cb -> 7092725)

[Charles Plessy]

This is an automated email from the git hooks/post-receive script.

plessy pushed a change to branch develop
in repository htslib.

      from  c8ec7cb   Merge branch 'bcftools+calling' into develop
       new  626a888   Use the exact type in realloc(N * sizeof(TYPE*))
       new  ea407fe   Merge branch 'develop' into bcftools+calling
       new  cf12fba   sam: New bam_str2flag and bam_flag2str functions for a more user-friendly setting of bitmasks. Removed the default pileup filters (except for BAM_FUNMAP) and moved the filtering to BAM-reading callbacks
       new  5d68967   Merge branch 'bcftools+calling' into develop
       new  5d609bc   Merge branch 'develop' into bcftools+calling
       new  7092725   Merge branch 'bcftools+calling' into develop

The 6 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 htslib/klist.h |  2 +-
 htslib/sam.h   |  3 +++
 sam.c          | 61 ++++++++++++++++++++++++++++++++++++++++++++++++----------
 3 files changed, 55 insertions(+), 11 deletions(-)

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